Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:04:09 (4084418): wrapper (7.7.26015): starting
04:04:09 (4084418): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 04:04:09] Arguments: --nthreads 12
[2025-07-22 04:04:09] Threads: 12
[2025-07-22 04:04:09] Checking for CVMFS
[2025-07-22 04:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 04:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 04:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 04:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 04:04:11] 2.11.5.0 10785 18081 146852 148618 0 454 34055676 45568000 28305 130560 0 109030800 99.710 96008195 26648 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 04:04:11] CVMFS is ok
[2025-07-22 04:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 04:04:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 04:04:11] Further information can be found at the LHC@home message board.
[2025-07-22 04:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 04:04:11] Checking for apptainer binary...
[2025-07-22 04:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 04:04:11] Running /usr/bin/apptainer --version
[2025-07-22 04:04:11] apptainer version 1.4.1-1.el9
[2025-07-22 04:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 04:04:12] wns0034.triumf.lcg
[2025-07-22 04:04:12] apptainer works
[2025-07-22 04:04:12] Set ATHENA_PROC_NUMBER=12
[2025-07-22 04:04:12] Set ATHENA_CORE_NUMBER=12
[2025-07-22 04:04:12] Starting ATLAS job with PandaID=6741708380
[2025-07-22 04:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 04:09:13]  *** The last 200 lines of the pilot log: ***
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | WARNING  | wrong length of table data, x=[1753182356.0], y=[2495.0] (must be same and length>=4)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | could have reported an average CPU frequency of 2702 MHz (4 samples)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | ..............................
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . Timing measurements:
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . get job = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . initial setup = 4 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . payload setup = 19 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . stage-in = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . payload execution = 55 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . stage-out = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . log creation = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | ..............................
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 04:09:13] 2025-07-22 11:08:40,464 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741708380/pilotlog.txt
[2025-07-22 04:09:13] 2025-07-22 11:08:40,474 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 04:09:13] - Log from pilotlog.txt -
[2025-07-22 04:09:13] 2025-07-22 11:08:40,460 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741708380/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | INFO     | extracted standard info from prmon json
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | WARNING  | wrong length of table data, x=[1753182356.0], y=[2495.0] (must be same and length>=4)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | could have reported an average CPU frequency of 2702 MHz (4 samples)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | ..............................
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . Timing measurements:
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . get job = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . initial setup = 4 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . payload setup = 19 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . stage-in = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . payload execution = 55 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . stage-out = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . log creation = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | ..............................
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 04:09:13] 2025-07-22 11:08:40,464 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741708380/pilotlog.txt
[2025-07-22 04:09:13] 2025-07-22 11:08:40,475 | WARNING  | 
[2025-07-22 04:09:13] [begin log extracts]
[2025-07-22 04:09:13] - Log from pilotlog.txt -
[2025-07-22 04:09:13] 2025-07-22 11:08:40,460 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741708380/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | INFO     | extracted standard info from prmon json
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 04:09:13] 2025-07-22 11:08:40,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | WARNING  | wrong length of table data, x=[1753182356.0], y=[2495.0] (must be same and length>=4)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | could have reported an average CPU frequency of 2702 MHz (4 samples)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | ..............................
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . Timing measurements:
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . get job = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . initial setup = 4 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . payload setup = 19 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . stage-in = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . payload execution = 55 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . stage-out = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | . log creation = 0 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | ..............................
[2025-07-22 04:09:13] 2025-07-22 11:08:40,463 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 04:09:13] 2025-07-22 11:08:40,464 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741708380/pilotlog.txt
[2025-07-22 04:09:13] [end log extracts]
[2025-07-22 04:09:13] 2025-07-22 11:08:40,475 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,476 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 04:09:13] 2025-07-22 11:08:40,972 | INFO     | 
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | job summary report
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | --------------------------------------------------
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | PanDA job id: 6741708380
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | task id: 45697453
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 04:06:22,226 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | pilot state: failed 
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | transexitcode: 65
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | exeerrorcode: 65
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | exitcode: 65
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | nevents: 0
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | neventsw: 0
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | pid: 4094370
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | pgrp: 4094370
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | corecount: 12
[2025-07-22 04:09:13] 2025-07-22 11:08:40,973 | INFO     | event service: False
[2025-07-22 04:09:13] 2025-07-22 11:08:40,974 | INFO     | sizes: {0: 2397372, 1: 2397571, 12: 2397571, 20: 2397861, 23: 2397889, 79: 2421256, 80: 2425548, 82: 2425576, 208: 2425770}
[2025-07-22 04:09:13] 2025-07-22 11:08:40,974 | INFO     | --------------------------------------------------
[2025-07-22 04:09:13] 2025-07-22 11:08:40,974 | INFO     | 
[2025-07-22 04:09:13] 2025-07-22 11:08:40,974 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 04:09:13] 2025-07-22 11:08:41,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,013 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 04:09:13] 2025-07-22 11:08:41,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 04:09:13] 2025-07-22 11:08:41,013 | INFO     | job 6741708380 has completed (purged errors)
[2025-07-22 04:09:13] 2025-07-22 11:08:41,013 | INFO     | overall cleanup function is called
[2025-07-22 04:09:13] 2025-07-22 11:08:42,020 | INFO     | --- collectZombieJob: --- 10, [4094370]
[2025-07-22 04:09:13] 2025-07-22 11:08:42,021 | INFO     | zombie collector waiting for pid 4094370
[2025-07-22 04:09:13] 2025-07-22 11:08:42,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 04:09:13] 2025-07-22 11:08:42,021 | INFO     | collected zombie processes
[2025-07-22 04:09:13] 2025-07-22 11:08:42,021 | INFO     | will attempt to kill all subprocesses of pid=4094370
[2025-07-22 04:09:13] 2025-07-22 11:08:43,000 | INFO     | process IDs to be killed: [4094370] (in reverse order)
[2025-07-22 04:09:13] 2025-07-22 11:08:43,246 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 04:09:13] 2025-07-22 11:08:43,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 04:09:13] 2025-07-22 11:08:43,283 | INFO     | did not find any defunct processes belonging to 4094370
[2025-07-22 04:09:13] 2025-07-22 11:08:43,310 | INFO     | did not find any defunct processes belonging to 4094370
[2025-07-22 04:09:13] 2025-07-22 11:08:43,311 | INFO     | ready for new job
[2025-07-22 04:09:13] 2025-07-22 11:08:43,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 04:09:13] 2025-07-22 11:08:43,313 | INFO     | ***************************************
[2025-07-22 04:09:13] 2025-07-22 11:08:43,314 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 04:09:13] 2025-07-22 11:08:43,314 | INFO     | ***************************************
[2025-07-22 04:09:13] 2025-07-22 11:08:43,314 | INFO     | 
[2025-07-22 04:09:13] 2025-07-22 11:08:43,342 | INFO     | architecture information:
[2025-07-22 04:09:13] 2025-07-22 11:08:43,344 | INFO     | executing command: cat /etc/os-release
[2025-07-22 04:09:13] 2025-07-22 11:08:43,372 | INFO     | cat /etc/os-release:
[2025-07-22 04:09:13] NAME="CentOS Linux"
[2025-07-22 04:09:13] VERSION="7 (Core)"
[2025-07-22 04:09:13] ID="centos"
[2025-07-22 04:09:13] ID_LIKE="rhel fedora"
[2025-07-22 04:09:13] VERSION_ID="7"
[2025-07-22 04:09:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 04:09:13] ANSI_COLOR="0;31"
[2025-07-22 04:09:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 04:09:13] HOME_URL="https://www.centos.org/"
[2025-07-22 04:09:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 04:09:13] 
[2025-07-22 04:09:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 04:09:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 04:09:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 04:09:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 04:09:13] 
[2025-07-22 04:09:13] 2025-07-22 11:08:43,372 | INFO     | ***************************************
[2025-07-22 04:09:13] 2025-07-22 11:08:43,877 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 04:09:13] 2025-07-22 11:08:43,908 | INFO     | sufficient remaining disk space (1218318434304 B)
[2025-07-22 04:09:13] 2025-07-22 11:08:43,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 04:09:13] 2025-07-22 11:08:43,908 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 04:09:13] 2025-07-22 11:08:43,908 | INFO     | update_server=False
[2025-07-22 04:09:13] 2025-07-22 11:08:43,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 04:09:13] 2025-07-22 11:08:43,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 04:09:13] 2025-07-22 11:08:44,089 | INFO     | all job control threads have been joined
[2025-07-22 04:09:13] 2025-07-22 11:08:44,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 04:09:13] 2025-07-22 11:08:44,185 | INFO     | aborting loop
[2025-07-22 04:09:13] 2025-07-22 11:08:44,289 | INFO     | all payload control threads have been joined
[2025-07-22 04:09:13] 2025-07-22 11:08:44,463 | INFO     | all data control threads have been joined
[2025-07-22 04:09:13] 2025-07-22 11:08:44,914 | INFO     | [job] retrieve thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:44,918 | INFO     | [payload] validate_post thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:44,969 | INFO     | [job] validate thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,095 | INFO     | [job] control thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,174 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,191 | INFO     | [job] job monitor thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,295 | INFO     | [payload] control thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,348 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,377 | INFO     | [payload] failed_post thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,469 | INFO     | [data] control thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:45,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 04:09:13] 2025-07-22 11:08:45,915 | INFO     | [data] copytool_out thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:46,004 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:46,411 | INFO     | [data] copytool_in thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:46,558 | INFO     | [job] queue monitor thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:46,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 04:09:13] 2025-07-22 11:08:50,723 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 04:09:13] 2025-07-22 11:08:52,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517514573632)>', '<ExcThread(monitor, started 140517195093760)>']
[2025-07-22 04:09:13] 2025-07-22 11:08:57,144 | INFO     | all workflow threads have been joined
[2025-07-22 04:09:13] 2025-07-22 11:08:57,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 04:09:13] 2025-07-22 11:08:57,145 | INFO     | traces error code: 0
[2025-07-22 04:09:13] 2025-07-22 11:08:57,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 04:09:13] 2025-07-22 11:09:12,829 | INFO     | PID=4088015 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 04:09:13] 2025-07-22 11:09:12,830 | INFO     | .. there are 49 such processes running
[2025-07-22 04:09:13] 2025-07-22 11:09:12,830 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 04:09:13] 2025-07-22 11:09:12,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 04:09:13] 2025-07-22 11:09:12,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 04:09:13] 2025-07-22 11:09:12,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 04:09:13] 2025-07-22 11:09:12,830 | INFO     | [monitor] control thread has ended
[2025-07-22 04:09:13] 2025-07-22 11:09:12,948 [wrapper] ==== pilot stdout END ====
[2025-07-22 04:09:13] 2025-07-22 11:09:12,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 04:09:13] 2025-07-22 11:09:12,952 [wrapper] pilotpid: 4088015
[2025-07-22 04:09:13] 2025-07-22 11:09:12,954 [wrapper] Pilot exit status: 0
[2025-07-22 04:09:13] 2025-07-22 11:09:13,005 [wrapper] pandaids: 6741708380
[2025-07-22 04:09:13] 2025-07-22 11:09:13,120 [wrapper] cleanup supervisor_pilot 4088021 4088016
[2025-07-22 04:09:13] 2025-07-22 11:09:13,151 [wrapper] Test setup, not cleaning
[2025-07-22 04:09:13] 2025-07-22 11:09:13,186 [wrapper] apfmon messages muted
[2025-07-22 04:09:13] 2025-07-22 11:09:13,234 [wrapper] ==== wrapper stdout END ====
[2025-07-22 04:09:13] 2025-07-22 11:09:13,253 [wrapper] ==== wrapper stderr END ====
[2025-07-22 04:09:13]  *** Error codes and diagnostics ***
[2025-07-22 04:09:13]     "exeErrorCode": 65,
[2025-07-22 04:09:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 04:09:13]     "pilotErrorCode": 1305,
[2025-07-22 04:09:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 04:09:13]  *** Listing of results directory ***
[2025-07-22 04:09:13] total 317940
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc    530466 Jul 21 15:09 pilot3.tar.gz
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc      5112 Jul 21 15:20 queuedata.json
[2025-07-22 04:09:13] -rwx------. 1 boinc boinc     36292 Jul 21 15:21 runpilot2-wrapper.sh
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc       100 Jul 22 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 04:09:13] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 04:04 run_atlas
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc       105 Jul 22 04:04 job.xml
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc      6597 Jul 22 04:04 init_data.xml
[2025-07-22 04:09:13] -rw-r--r--. 2 boinc boinc 321493168 Jul 22 04:04 EVNT.45697451._000028.pool.root.1
[2025-07-22 04:09:13] -rw-r--r--. 2 boinc boinc     15095 Jul 22 04:04 start_atlas.sh
[2025-07-22 04:09:13] drwxrwx--x. 2 boinc boinc      4096 Jul 22 04:04 shared
[2025-07-22 04:09:13] -rw-r--r--. 2 boinc boinc    542903 Jul 22 04:04 input.tar.gz
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc         0 Jul 22 04:04 boinc_lockfile
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc      2631 Jul 22 04:04 pandaJob.out
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc    976654 Jul 22 04:04 agis_schedconf.cvmfs.json
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc   1593031 Jul 22 04:04 agis_ddmendpoints.agis.ALL.json
[2025-07-22 04:09:13] drwx------. 4 boinc boinc      4096 Jul 22 04:04 pilot3
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc       523 Jul 22 04:06 boinc_task_state.xml
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc       973 Jul 22 04:06 memory_monitor_summary.json
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc     21423 Jul 22 04:06 log.45697453._000697.job.log.tgz.1
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc        95 Jul 22 04:08 pilot_heartbeat.json
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc      8373 Jul 22 04:08 heartbeat.json
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc      8192 Jul 22 04:09 boinc_mmap_file
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc        22 Jul 22 04:09 wrapper_checkpoint.txt
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc       823 Jul 22 04:09 pilotlog.txt
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc     80427 Jul 22 04:09 log.45697453._000697.job.log.1
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc       188 Jul 22 04:09 output.list
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc       620 Jul 22 04:09 runtime_log
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc    122880 Jul 22 04:09 result.tar.gz
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc      8485 Jul 22 04:09 runtime_log.err
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc       645 Jul 22 04:09 6tuKDmm3Dy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlctKDmD4APfm.diag
[2025-07-22 04:09:13] -rw-r--r--. 1 boinc boinc     21817 Jul 22 04:09 stderr.txt
[2025-07-22 04:09:13] No HITS result produced
[2025-07-22 04:09:13]  *** Contents of shared directory: ***
[2025-07-22 04:09:13] total 314632
[2025-07-22 04:09:13] -rw-r--r--. 2 boinc boinc 321493168 Jul 22 04:04 ATLAS.root_0
[2025-07-22 04:09:13] -rw-r--r--. 2 boinc boinc     15095 Jul 22 04:04 start_atlas.sh
[2025-07-22 04:09:13] -rw-r--r--. 2 boinc boinc    542903 Jul 22 04:04 input.tar.gz
[2025-07-22 04:09:13] -rw-------. 1 boinc boinc    122880 Jul 22 04:09 result.tar.gz
04:09:14 (4084418): run_atlas exited; CPU time 27.418579
04:09:14 (4084418): called boinc_finish(0)

</stderr_txt>
]]>

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