Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:51:12 (3103308): wrapper (7.7.26015): starting
05:51:12 (3103308): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 05:51:12] Arguments: --nthreads 8
[2025-07-22 05:51:12] Threads: 8
[2025-07-22 05:51:12] Checking for CVMFS
[2025-07-22 05:51:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 05:51:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 05:51:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 05:51:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 05:51:13] 2.12.6.0 557484 11023 334080 148616 1 367 25925180 32935937 23842 16776704 0 44794573 99.562 75912099 22321 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-22 05:51:13] CVMFS is ok
[2025-07-22 05:51:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 05:51:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 05:51:13] Further information can be found at the LHC@home message board.
[2025-07-22 05:51:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 05:51:13] Checking for apptainer binary...
[2025-07-22 05:51:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 05:51:13] Running /usr/bin/apptainer --version
[2025-07-22 05:51:13] apptainer version 1.4.1-1.el9
[2025-07-22 05:51:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 05:51:13] c7-3-34.aglt2.org
[2025-07-22 05:51:13] apptainer works
[2025-07-22 05:51:13] Set ATHENA_PROC_NUMBER=8
[2025-07-22 05:51:13] Set ATHENA_CORE_NUMBER=8
[2025-07-22 05:51:13] Starting ATLAS job with PandaID=6741739094
[2025-07-22 05:51:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 10:49:40]  *** The last 200 lines of the pilot log: ***
[2025-07-22 10:49:40] 2025-07-22 14:49:02,686 | INFO     | PID=3115724 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 10:49:40] 2025-07-22 14:49:02,687 | INFO     | .. there are 55 such processes running
[2025-07-22 10:49:40] 2025-07-22 14:49:03,846 | INFO     | monitor loop #1141: job 0:6741739094 is in state 'finished'
[2025-07-22 10:49:40] 2025-07-22 14:49:03,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 10:49:40] 2025-07-22 14:49:05,487 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 10:49:40] 2025-07-22 14:49:05,507 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3102.7130416666673
[2025-07-22 10:49:40] 2025-07-22 14:49:05,546 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741739094/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 10:49:40] 2025-07-22 14:49:05,546 | INFO     | extracted standard info from prmon json
[2025-07-22 10:49:40] 2025-07-22 14:49:05,547 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 10:49:40] 2025-07-22 14:49:05,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 10:49:40] 2025-07-22 14:49:05,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 10:49:40] 2025-07-22 14:49:05,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 10:49:40] 2025-07-22 14:49:05,595 | INFO     | fitting pss+swap vs Time
[2025-07-22 10:49:40] 2025-07-22 14:49:05,595 | INFO     | sum of square deviations: 7641069353.986263
[2025-07-22 10:49:40] 2025-07-22 14:49:05,597 | INFO     | sum of deviations: 15922569734.1718
[2025-07-22 10:49:40] 2025-07-22 14:49:05,597 | INFO     | mean x: 1753186850.006873
[2025-07-22 10:49:40] 2025-07-22 14:49:05,597 | INFO     | mean y: 2172123.9140893472
[2025-07-22 10:49:40] 2025-07-22 14:49:05,597 | INFO     | -- intersect: -3651143738.4402227
[2025-07-22 10:49:40] 2025-07-22 14:49:05,597 | INFO     | intersect: -3651143738.4402227
[2025-07-22 10:49:40] 2025-07-22 14:49:05,598 | INFO     | chi2: 3.0374943556047684
[2025-07-22 10:49:40] 2025-07-22 14:49:05,598 | INFO     | sum of square deviations: 7253927821.486022
[2025-07-22 10:49:40] 2025-07-22 14:49:05,621 | INFO     | sum of deviations: 32518132058.36361
[2025-07-22 10:49:40] 2025-07-22 14:49:05,621 | INFO     | mean x: 1753186697.506993
[2025-07-22 10:49:40] 2025-07-22 14:49:05,621 | INFO     | mean y: 2178566.8181818184
[2025-07-22 10:49:40] 2025-07-22 14:49:05,621 | INFO     | -- intersect: -7857061000.418065
[2025-07-22 10:49:40] 2025-07-22 14:49:05,622 | INFO     | intersect: -7857061000.418065
[2025-07-22 10:49:40] 2025-07-22 14:49:05,622 | INFO     | chi2: 2.2798706024943276
[2025-07-22 10:49:40] 2025-07-22 14:49:05,622 | INFO     | current chi2=2.2798706024943276 (change=24.94239213029244 %)
[2025-07-22 10:49:40] 2025-07-22 14:49:05,622 | INFO     | right removable region: 285
[2025-07-22 10:49:40] 2025-07-22 14:49:05,622 | INFO     | sum of square deviations: 7253926601.486022
[2025-07-22 10:49:40] 2025-07-22 14:49:05,642 | INFO     | sum of deviations: -33873032779.167885
[2025-07-22 10:49:40] 2025-07-22 14:49:05,642 | INFO     | mean x: 1753187002.506993
[2025-07-22 10:49:40] 2025-07-22 14:49:05,642 | INFO     | mean y: 2191634.083916084
[2025-07-22 10:49:40] 2025-07-22 14:49:05,642 | INFO     | -- intersect: 8188897133.938965
[2025-07-22 10:49:40] 2025-07-22 14:49:05,643 | INFO     | intersect: 8188897133.938965
[2025-07-22 10:49:40] 2025-07-22 14:49:05,643 | INFO     | chi2: 1.2020436120075604
[2025-07-22 10:49:40] 2025-07-22 14:49:05,643 | INFO     | current chi2=1.2020436120075604 (change=60.42647421584321 %)
[2025-07-22 10:49:40] 2025-07-22 14:49:05,643 | INFO     | sum of square deviations: 6880086423.985747
[2025-07-22 10:49:40] 2025-07-22 14:49:05,645 | INFO     | sum of deviations: -24860977181.786472
[2025-07-22 10:49:40] 2025-07-22 14:49:05,645 | INFO     | mean x: 1753187155.0071175
[2025-07-22 10:49:40] 2025-07-22 14:49:05,645 | INFO     | mean y: 2187932.893238434
[2025-07-22 10:49:40] 2025-07-22 14:49:05,645 | INFO     | -- intersect: 6337274902.743107
[2025-07-22 10:49:40] 2025-07-22 14:49:05,645 | INFO     | intersect: 6337274902.743107
[2025-07-22 10:49:40] 2025-07-22 14:49:05,660 | INFO     | chi2: 1.1402746811564488
[2025-07-22 10:49:40] 2025-07-22 14:49:05,660 | INFO     | current chi2=1.1402746811564488 (change=5.138659715345092 %)
[2025-07-22 10:49:40] 2025-07-22 14:49:05,660 | INFO     | left removable region: 20
[2025-07-22 10:49:40] 2025-07-22 14:49:05,660 | INFO     | sum of square deviations: 5770483735.984867
[2025-07-22 10:49:40] 2025-07-22 14:49:05,662 | INFO     | sum of deviations: 17960871444.35851
[2025-07-22 10:49:40] 2025-07-22 14:49:05,662 | INFO     | mean x: 1753187277.0075471
[2025-07-22 10:49:40] 2025-07-22 14:49:05,662 | INFO     | mean y: 2182764.320754717
[2025-07-22 10:49:40] 2025-07-22 14:49:05,662 | INFO     | -- intersect: -5454685800.068884
[2025-07-22 10:49:40] 2025-07-22 14:49:05,662 | INFO     | intersect: -5454685800.068884
[2025-07-22 10:49:40] 2025-07-22 14:49:05,663 | INFO     | chi2: 0.09317757557063215
[2025-07-22 10:49:40] 2025-07-22 14:49:05,663 | INFO     | -- intersect: -5454685800.068884
[2025-07-22 10:49:40] 2025-07-22 14:49:05,663 | INFO     | current memory leak: 3.11 B/s (using 265 data points, chi2=0.09)
[2025-07-22 10:49:40] 2025-07-22 14:49:05,663 | INFO     | could have reported an average CPU frequency of 3109 MHz (13 samples)
[2025-07-22 10:49:40] 2025-07-22 14:49:05,683 | INFO     | ..............................
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | . Timing measurements:
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | . get job = 0 s
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | . initial setup = 3 s
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | . payload setup = 25 s
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | . stage-in = 0 s
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | . payload execution = 17730 s
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | . stage-out = 4 s
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | . log creation = 0 s
[2025-07-22 10:49:40] 2025-07-22 14:49:05,684 | INFO     | ..............................
[2025-07-22 10:49:40] 2025-07-22 14:49:05,981 | INFO     | 
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | job summary report
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | --------------------------------------------------
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | PanDA job id: 6741739094
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | task id: 45697453
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | errors: (none)
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | pilot state: finished 
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | transexitcode: 0
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | exeerrorcode: 0
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | exeerrordiag: 
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | exitcode: 0
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | exitmsg: OK
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | cpuconsumptiontime: 47473 s
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | nevents: 400
[2025-07-22 10:49:40] 2025-07-22 14:49:05,982 | INFO     | neventsw: 0
[2025-07-22 10:49:40] 2025-07-22 14:49:05,983 | INFO     | pid: 3140703
[2025-07-22 10:49:40] 2025-07-22 14:49:05,983 | INFO     | pgrp: 3140703
[2025-07-22 10:49:40] 2025-07-22 14:49:05,983 | INFO     | corecount: 8
[2025-07-22 10:49:40] 2025-07-22 14:49:05,983 | INFO     | event service: False
[2025-07-22 10:49:40] 2025-07-22 14:49:05,983 | INFO     | sizes: {0: 2397325, 1: 2397580, 12: 2397580, 18: 2397870, 23: 2397898, 17760: 2430377, 17765: 2439431, 17784: 2439569}
[2025-07-22 10:49:40] 2025-07-22 14:49:05,983 | INFO     | --------------------------------------------------
[2025-07-22 10:49:40] 2025-07-22 14:49:05,983 | INFO     | 
[2025-07-22 10:49:40] 2025-07-22 14:49:05,983 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,019 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 10:49:40] 2025-07-22 14:49:06,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,035 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 10:49:40] 2025-07-22 14:49:06,035 | INFO     | job 6741739094 has completed (purged errors)
[2025-07-22 10:49:40] 2025-07-22 14:49:06,035 | INFO     | overall cleanup function is called
[2025-07-22 10:49:40] 2025-07-22 14:49:07,054 | INFO     | --- collectZombieJob: --- 10, [3140703]
[2025-07-22 10:49:40] 2025-07-22 14:49:07,055 | INFO     | zombie collector waiting for pid 3140703
[2025-07-22 10:49:40] 2025-07-22 14:49:07,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 10:49:40] 2025-07-22 14:49:07,055 | INFO     | collected zombie processes
[2025-07-22 10:49:40] 2025-07-22 14:49:07,055 | INFO     | will attempt to kill all subprocesses of pid=3140703
[2025-07-22 10:49:40] 2025-07-22 14:49:08,176 | INFO     | process IDs to be killed: [3140703] (in reverse order)
[2025-07-22 10:49:40] 2025-07-22 14:49:08,643 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 10:49:40] 2025-07-22 14:49:08,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 10:49:40] 2025-07-22 14:49:08,705 | INFO     | did not find any defunct processes belonging to 3140703
[2025-07-22 10:49:40] 2025-07-22 14:49:08,735 | INFO     | did not find any defunct processes belonging to 3140703
[2025-07-22 10:49:40] 2025-07-22 14:49:08,735 | INFO     | ready for new job
[2025-07-22 10:49:40] 2025-07-22 14:49:08,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 10:49:40] 2025-07-22 14:49:08,737 | INFO     | ***************************************
[2025-07-22 10:49:40] 2025-07-22 14:49:08,737 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 10:49:40] 2025-07-22 14:49:08,737 | INFO     | ***************************************
[2025-07-22 10:49:40] 2025-07-22 14:49:08,737 | INFO     | 
[2025-07-22 10:49:40] 2025-07-22 14:49:08,758 | INFO     | architecture information:
[2025-07-22 10:49:40] 2025-07-22 14:49:08,758 | INFO     | executing command: cat /etc/os-release
[2025-07-22 10:49:40] 2025-07-22 14:49:08,812 | INFO     | cat /etc/os-release:
[2025-07-22 10:49:40] NAME="CentOS Linux"
[2025-07-22 10:49:40] VERSION="7 (Core)"
[2025-07-22 10:49:40] ID="centos"
[2025-07-22 10:49:40] ID_LIKE="rhel fedora"
[2025-07-22 10:49:40] VERSION_ID="7"
[2025-07-22 10:49:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 10:49:40] ANSI_COLOR="0;31"
[2025-07-22 10:49:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 10:49:40] HOME_URL="https://www.centos.org/"
[2025-07-22 10:49:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 10:49:40] 
[2025-07-22 10:49:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 10:49:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 10:49:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 10:49:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 10:49:40] 
[2025-07-22 10:49:40] 2025-07-22 14:49:08,813 | INFO     | ***************************************
[2025-07-22 10:49:40] 2025-07-22 14:49:09,332 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 10:49:40] 2025-07-22 14:49:09,415 | INFO     | sufficient remaining disk space (74764517376 B)
[2025-07-22 10:49:40] 2025-07-22 14:49:09,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 10:49:40] 2025-07-22 14:49:09,415 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 10:49:40] 2025-07-22 14:49:09,415 | INFO     | update_server=False
[2025-07-22 10:49:40] 2025-07-22 14:49:09,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 10:49:40] 2025-07-22 14:49:09,705 | INFO     | all payload control threads have been joined
[2025-07-22 10:49:40] 2025-07-22 14:49:09,777 | INFO     | all data control threads have been joined
[2025-07-22 10:49:40] 2025-07-22 14:49:09,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 10:49:40] 2025-07-22 14:49:09,933 | INFO     | aborting loop
[2025-07-22 10:49:40] 2025-07-22 14:49:10,432 | INFO     | [job] retrieve thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:10,532 | INFO     | [job] validate thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:10,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 10:49:40] 2025-07-22 14:49:10,565 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:10,712 | INFO     | [payload] control thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:10,779 | INFO     | [payload] validate_post thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:10,783 | INFO     | [data] control thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:10,919 | INFO     | all job control threads have been joined
[2025-07-22 10:49:40] 2025-07-22 14:49:10,938 | INFO     | [job] job monitor thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:10,949 | INFO     | [payload] failed_post thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:10,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 10:49:40] 2025-07-22 14:49:11,451 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:11,514 | INFO     | [data] copytool_in thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:11,515 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:11,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 10:49:40] 2025-07-22 14:49:11,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:11,925 | INFO     | [job] control thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:12,004 | INFO     | [job] queue monitor thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:12,559 | INFO     | [data] copytool_out thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:15,715 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 10:49:40] 2025-07-22 14:49:16,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257978500928)>', '<ExcThread(monitor, started 140257483794176)>']
[2025-07-22 10:49:40] 2025-07-22 14:49:21,993 | INFO     | all workflow threads have been joined
[2025-07-22 10:49:40] 2025-07-22 14:49:21,993 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 10:49:40] 2025-07-22 14:49:21,993 | INFO     | traces error code: 0
[2025-07-22 10:49:40] 2025-07-22 14:49:21,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 10:49:40] 2025-07-22 14:49:40,366 | INFO     | PID=3115724 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 10:49:40] 2025-07-22 14:49:40,366 | INFO     | .. there are 55 such processes running
[2025-07-22 10:49:40] 2025-07-22 14:49:40,366 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 10:49:40] 2025-07-22 14:49:40,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 10:49:40] 2025-07-22 14:49:40,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 10:49:40] 2025-07-22 14:49:40,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 10:49:40] 2025-07-22 14:49:40,366 | INFO     | [monitor] control thread has ended
[2025-07-22 10:49:40] 2025-07-22 14:49:40,516 [wrapper] ==== pilot stdout END ====
[2025-07-22 10:49:40] 2025-07-22 14:49:40,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 10:49:40] 2025-07-22 14:49:40,541 [wrapper] pilotpid: 3115724
[2025-07-22 10:49:40] 2025-07-22 14:49:40,551 [wrapper] Pilot exit status: 0
[2025-07-22 10:49:40] 2025-07-22 14:49:40,607 [wrapper] pandaids: 6741739094
[2025-07-22 10:49:40] 2025-07-22 14:49:40,729 [wrapper] cleanup supervisor_pilot  588327 3115725
[2025-07-22 10:49:40] 2025-07-22 14:49:40,731 [wrapper] Test setup, not cleaning
[2025-07-22 10:49:40] 2025-07-22 14:49:40,733 [wrapper] apfmon messages muted
[2025-07-22 10:49:40] 2025-07-22 14:49:40,736 [wrapper] ==== wrapper stdout END ====
[2025-07-22 10:49:40] 2025-07-22 14:49:40,738 [wrapper] ==== wrapper stderr END ====
[2025-07-22 10:49:40]  *** Error codes and diagnostics ***
[2025-07-22 10:49:40]     "exeErrorCode": 0,
[2025-07-22 10:49:40]     "exeErrorDiag": "",
[2025-07-22 10:49:40]     "pilotErrorCode": 0,
[2025-07-22 10:49:40]     "pilotErrorDiag": "",
[2025-07-22 10:49:40]  *** Listing of results directory ***
[2025-07-22 10:49:40] total 575736
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 00:08 queuedata.json
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 00:09 pilot3.tar.gz
[2025-07-22 10:49:40] -rwx------. 1 boincer umatlas     36292 Jul 22 00:11 runpilot2-wrapper.sh
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas       100 Jul 22 05:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 10:49:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 05:51 run_atlas
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas       105 Jul 22 05:51 job.xml
[2025-07-22 10:49:40] -rw-r--r--. 2 boincer umatlas 318981542 Jul 22 05:51 EVNT.45697451._000188.pool.root.1
[2025-07-22 10:49:40] -rw-r--r--. 2 boincer umatlas    542908 Jul 22 05:51 input.tar.gz
[2025-07-22 10:49:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 05:51 start_atlas.sh
[2025-07-22 10:49:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 05:51 shared
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas         0 Jul 22 05:51 boinc_lockfile
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas      2634 Jul 22 05:51 pandaJob.out
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas    976638 Jul 22 05:51 agis_schedconf.cvmfs.json
[2025-07-22 10:49:40] drwx------. 4 boincer umatlas      4096 Jul 22 05:51 pilot3
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas 262820716 Jul 22 10:47 HITS.45697453._004699.pool.root.1
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas       530 Jul 22 10:47 boinc_task_state.xml
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas      1037 Jul 22 10:48 memory_monitor_summary.json
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas      6933 Jul 22 10:48 init_data.xml
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas   1593031 Jul 22 10:48 agis_ddmendpoints.agis.ALL.json
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas    440753 Jul 22 10:48 log.45697453._004699.job.log.tgz.1
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas        95 Jul 22 10:49 pilot_heartbeat.json
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas      7777 Jul 22 10:49 heartbeat.json
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas        28 Jul 22 10:49 wrapper_checkpoint.txt
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 10:49 boinc_mmap_file
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas       823 Jul 22 10:49 pilotlog.txt
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas   1497708 Jul 22 10:49 log.45697453._004699.job.log.1
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas       357 Jul 22 10:49 output.list
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas       620 Jul 22 10:49 runtime_log
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas   1955840 Jul 22 10:49 result.tar.gz
[2025-07-22 10:49:40] -rw-------. 1 boincer umatlas       656 Jul 22 10:49 Vt5KDmWWJy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuRuKDmnwMJqn.diag
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas      8656 Jul 22 10:49 runtime_log.err
[2025-07-22 10:49:40] -rw-r--r--. 1 boincer umatlas     21307 Jul 22 10:49 stderr.txt
[2025-07-22 10:49:41] HITS file was successfully produced:
[2025-07-22 10:49:41] -rw-------. 1 boincer umatlas 262820716 Jul 22 10:47 shared/HITS.pool.root.1
[2025-07-22 10:49:41]  *** Contents of shared directory: ***
[2025-07-22 10:49:41] total 570640
[2025-07-22 10:49:41] -rw-r--r--. 2 boincer umatlas 318981542 Jul 22 05:51 ATLAS.root_0
[2025-07-22 10:49:41] -rw-r--r--. 2 boincer umatlas    542908 Jul 22 05:51 input.tar.gz
[2025-07-22 10:49:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 05:51 start_atlas.sh
[2025-07-22 10:49:41] -rw-------. 1 boincer umatlas 262820716 Jul 22 10:47 HITS.pool.root.1
[2025-07-22 10:49:41] -rw-------. 1 boincer umatlas   1955840 Jul 22 10:49 result.tar.gz
10:49:42 (3103308): run_atlas exited; CPU time 48252.820594
10:49:42 (3103308): called boinc_finish(0)

</stderr_txt>
]]>

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