| Name | LCjLDmPHJy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBIILDmadVtXn_1 |
| Workunit | 233728015 |
| Created | 22 Jul 2025, 6:29:59 UTC |
| Sent | 22 Jul 2025, 9:14:47 UTC |
| Report deadline | 30 Jul 2025, 9:14:47 UTC |
| Received | 22 Jul 2025, 9:33:14 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 0 (0x00000000) |
| Computer ID | 10871274 |
| Run time | 6 min 54 sec |
| CPU time | 18 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 22.08 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 68.98 MB |
| Peak swap size | 1.63 GB |
| Peak disk usage | 618.72 MB |
Stderr output
<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:22:13 (2994473): wrapper (7.7.26015): starting
11:22:13 (2994473): wrapper: running run_atlas (--nthreads 3)
[2025-07-22 11:22:13] Arguments: --nthreads 3
[2025-07-22 11:22:13] Threads: 3
[2025-07-22 11:22:13] Checking for CVMFS
[2025-07-22 11:22:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 11:22:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 11:22:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 11:22:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 11:22:16] 2.9.2.0 2656345 2 30284 148616 1 5 8846209 36864001 0 130560 0 1 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-22 11:22:16] CVMFS is ok
[2025-07-22 11:22:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 11:22:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 11:22:16] Further information can be found at the LHC@home message board.
[2025-07-22 11:22:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 11:22:16] Checking for apptainer binary...
[2025-07-22 11:22:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 11:22:16] Running /usr/bin/apptainer --version
[2025-07-22 11:22:16] apptainer version 1.4.1-1.1
[2025-07-22 11:22:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 11:22:17] thA373
[2025-07-22 11:22:17] apptainer works
[2025-07-22 11:22:17] Set ATHENA_PROC_NUMBER=3
[2025-07-22 11:22:17] Set ATHENA_CORE_NUMBER=3
[2025-07-22 11:22:17] Starting ATLAS job with PandaID=6741714837
[2025-07-22 11:22:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 11:29:23] *** The last 200 lines of the pilot log: ***
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/user/atlas/common.py", line 2168, in remove_redundant_files
[2025-07-22 11:29:23] list_work_dir(workdir)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/user/atlas/common.py", line 2074, in list_work_dir
[2025-07-22 11:29:23] _, stdout, stderr = execute(cmd)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/util/container.py", line 88, in execute
[2025-07-22 11:29:23] process = subprocess.Popen(
[2025-07-22 11:29:23] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/lib/python3.9/subprocess.py", line 951, in __init__
[2025-07-22 11:29:23] self._execute_child(args, executable, preexec_fn, close_fds,
[2025-07-22 11:29:23] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/lib/python3.9/subprocess.py", line 1837, in _execute_child
[2025-07-22 11:29:23] raise child_exception_type(errno_num, err_msg, err_filename)
[2025-07-22 11:29:23] unexpected exception caught by thread run() function: (<class 'OSError'>, OSError(107, 'Transport endpoint is not connected'), <traceback object at 0x7f3fca7e49c0>)
[2025-07-22 11:29:23] Traceback (most recent call last):
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/common/exception.py", line 466, in run
[2025-07-22 11:29:23] self._target(**self.kwargs)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/data.py", line 637, in copytool_out
[2025-07-22 11:29:23] if _stage_out_new(job, args):
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/data.py", line 1043, in _stage_out_new
[2025-07-22 11:29:23] create_log(job.workdir, logfile.lfn, tarball_name, args.cleanup,
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/data.py", line 775, in create_log
[2025-07-22 11:29:23] user.remove_redundant_files(workdir, piloterrors=piloterrors, debugmode=debugmode)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/user/atlas/common.py", line 2168, in remove_redundant_files
[2025-07-22 11:29:23] list_work_dir(workdir)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/user/atlas/common.py", line 2074, in list_work_dir
[2025-07-22 11:29:23] _, stdout, stderr = execute(cmd)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/util/container.py", line 88, in execute
[2025-07-22 11:29:23] process = subprocess.Popen(
[2025-07-22 11:29:23] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/lib/python3.9/subprocess.py", line 951, in __init__
[2025-07-22 11:29:23] self._execute_child(args, executable, preexec_fn, close_fds,
[2025-07-22 11:29:23] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/lib/python3.9/subprocess.py", line 1837, in _execute_child
[2025-07-22 11:29:23] raise child_exception_type(errno_num, err_msg, err_filename)
[2025-07-22 11:29:23] OSError: [Errno 107] Transport endpoint is not connected: '/bin/bash'
[2025-07-22 11:29:23]
[2025-07-22 11:29:23] None
[2025-07-22 11:29:23] exception has been put in bucket queue belonging to thread 'copytool_out'
[2025-07-22 11:29:23] setting graceful stop in 10 s since there is no point in continuing
[2025-07-22 11:29:23] 2025-07-22 09:27:01,748 | WARNING | thread 'copytool_out' received an exception from bucket: [Errno 107] Transport endpoint is not connected: '/bin/bash'
[2025-07-22 11:29:23] 2025-07-22 09:27:03,235 | INFO | monitor loop #49: job 0:6741714837 is in state 'failed'
[2025-07-22 11:29:23] 2025-07-22 09:27:03,235 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-22 11:29:23] 2025-07-22 09:27:05,740 | INFO | monitor loop #50: job 0:6741714837 is in state 'failed'
[2025-07-22 11:29:23] 2025-07-22 09:27:05,740 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-22 11:29:23] 2025-07-22 09:27:08,246 | INFO | monitor loop #51: job 0:6741714837 is in state 'failed'
[2025-07-22 11:29:23] 2025-07-22 09:27:08,246 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-22 11:29:23] 2025-07-22 09:27:10,754 | INFO | monitor loop #52: job 0:6741714837 is in state 'failed'
[2025-07-22 11:29:23] 2025-07-22 09:27:10,754 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-22 11:29:23] 2025-07-22 09:27:11,316 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:29:23] 2025-07-22 09:27:11,316 | INFO | will abort loop
[2025-07-22 11:29:23] 2025-07-22 09:27:11,316 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 11:29:23] 2025-07-22 09:27:11,560 | INFO | all data control threads have been joined
[2025-07-22 11:29:23] 2025-07-22 09:27:11,657 | INFO | found 1 job(s) in 20 queues
[2025-07-22 11:29:23] 2025-07-22 09:27:11,657 | INFO | aborting job 6741714837
[2025-07-22 11:29:23] 2025-07-22 09:27:12,203 | INFO | all payload control threads have been joined
[2025-07-22 11:29:23] 2025-07-22 09:27:12,209 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 11:29:23] 2025-07-22 09:27:12,209 | WARNING | will wait for a maximum of 300 s for threads to finish
[2025-07-22 11:29:23] 2025-07-22 09:27:12,209 | INFO | job 6741714837 has state=failed
[2025-07-22 11:29:23] 2025-07-22 09:27:12,209 | INFO | preparing for final server update for job 6741714837 in state='failed'
[2025-07-22 11:29:23] 2025-07-22 09:27:12,323 | INFO | [job] job monitor thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:12,430 | INFO | [job] validate thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:12,566 | INFO | [data] control thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:12,697 | INFO | [payload] validate_pre thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:12,774 | INFO | all job control threads have been joined
[2025-07-22 11:29:23] 2025-07-22 09:27:13,148 | INFO | [job] create_data_payload thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:13,172 | INFO | [payload] failed_post thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:13,209 | INFO | [job] retrieve thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:13,209 | INFO | [payload] control thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:13,231 | WARNING | job_aborted has been set - aborting pilot monitoring
[2025-07-22 11:29:23] 2025-07-22 09:27:13,231 | INFO | [monitor] control thread has ended
[2025-07-22 11:29:23] 2025-07-22 09:27:13,486 | INFO | [payload] validate_post thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:13,496 | INFO | [data] copytool_in thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:13,558 | INFO | [payload] run_realtimelog thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:13,781 | INFO | [job] control thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:15,327 | INFO | [data] queue_monitor thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:16,424 | INFO | [payload] execute_payloads thread has finished
[2025-07-22 11:29:23] 2025-07-22 09:27:17,078 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:19,092 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:21,103 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:23,115 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:25,125 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:27,138 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:29,150 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:31,162 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:33,174 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:35,184 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:37,196 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:39,207 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:41,219 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:43,229 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:45,239 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:47,252 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:49,262 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:51,277 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:53,290 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:55,300 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:57,311 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:27:59,323 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:01,336 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:03,349 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:05,361 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:07,372 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:09,386 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:11,399 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:13,411 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:15,423 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:17,436 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:19,447 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:21,460 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:23,471 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:25,483 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:27,494 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:29,505 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:31,515 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:33,526 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:35,538 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:37,549 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:39,561 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:41,572 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:43,586 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:45,600 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:47,612 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:49,625 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:51,637 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:53,650 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:55,662 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:57,674 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:28:59,685 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:01,699 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:03,711 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:05,721 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:07,439 | INFO | proceeding with final server update
[2025-07-22 11:29:23] 2025-07-22 09:29:07,439 | INFO | this job has now completed (state=failed)
[2025-07-22 11:29:23] 2025-07-22 09:29:07,439 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2025-07-22 11:29:23] 2025-07-22 09:29:07,439 | INFO | log transfer has not been attempted: IN_PROGRESS
[2025-07-22 11:29:23] 2025-07-22 09:29:07,440 | INFO | job 6741714837 has state 'failed' - writing heartbeat
[2025-07-22 11:29:23] 2025-07-22 09:29:07,440 | INFO | payload/TRF did not report the number of read events
[2025-07-22 11:29:23] 2025-07-22 09:29:07,440 | WARNING | command=lscpu does not exist - cannot check number of available cores
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/common/exception.py", line 466, in run
[2025-07-22 11:29:23] self._target(**self.kwargs)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 2797, in queue_monitor
[2025-07-22 11:29:23] update_server(job, args)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 2846, in update_server
[2025-07-22 11:29:23] send_state(job, args, job.state, metadata=metadata)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 434, in send_state
[2025-07-22 11:29:23] data = get_data_structure(job, state, args, xml=xml, metadata=metadata)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 769, in get_data_structure
[2025-07-22 11:29:23] cpumodel = get_cpu_model() # ARM info will be corrected below if necessary (otherwise cpumodel will contain UNKNOWN)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/util/workernode.py", line 279, in get_cpu_model
[2025-07-22 11:29:23] with open("/proc/cpuinfo", "r") as _fp:
[2025-07-22 11:29:23] unexpected exception caught by thread run() function: (<class 'OSError'>, OSError(116, 'Stale file handle'), <traceback object at 0x7f3fcbfaa800>)
[2025-07-22 11:29:23] Traceback (most recent call last):
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/common/exception.py", line 466, in run
[2025-07-22 11:29:23] self._target(**self.kwargs)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 2797, in queue_monitor
[2025-07-22 11:29:23] update_server(job, args)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 2846, in update_server
[2025-07-22 11:29:23] send_state(job, args, job.state, metadata=metadata)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 434, in send_state
[2025-07-22 11:29:23] data = get_data_structure(job, state, args, xml=xml, metadata=metadata)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 769, in get_data_structure
[2025-07-22 11:29:23] cpumodel = get_cpu_model() # ARM info will be corrected below if necessary (otherwise cpumodel will contain UNKNOWN)
[2025-07-22 11:29:23] File "/local/data/boinc/slots/0/pilot3/pilot/util/workernode.py", line 279, in get_cpu_model
[2025-07-22 11:29:23] with open("/proc/cpuinfo", "r") as _fp:
[2025-07-22 11:29:23] OSError: [Errno 116] Stale file handle: '/proc/cpuinfo'
[2025-07-22 11:29:23]
[2025-07-22 11:29:23] None
[2025-07-22 11:29:23] exception has been put in bucket queue belonging to thread 'queue_monitor'
[2025-07-22 11:29:23] setting graceful stop in 10 s since there is no point in continuing
[2025-07-22 11:29:23] 2025-07-22 09:29:07,732 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:09,743 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:11,754 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:13,770 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:15,787 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139912043640640)>', '<ExcThread(queue_monitor, started 139911042692864)>']
[2025-07-22 11:29:23] 2025-07-22 09:29:17,797 | INFO | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 139912043640640)>'])
[2025-07-22 11:29:23] 2025-07-22 09:29:22,825 | INFO | all workflow threads have been joined
[2025-07-22 11:29:23] 2025-07-22 09:29:22,825 | INFO | end of generic workflow (traces error code: 0)
[2025-07-22 11:29:23] 2025-07-22 09:29:22,825 | INFO | traces error code: 0
[2025-07-22 11:29:23] 2025-07-22 09:29:22,825 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] ==== pilot stdout END ====
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] ==== wrapper stdout RESUME ====
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] pilotpid: 3131394
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] Pilot exit status: 0
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 1018: /usr/bin/cat: Stale file handle
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 1018: cut: command not found
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 1018: xargs: command not found
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] pandaids:
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 27: ps: command not found
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] No supervise_pilot CHILD process found
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 36: /dev/null: Stale file handle
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] Test setup, not cleaning
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] apfmon messages muted
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 11:29:23] ==== wrapper stdout END ====
[2025-07-22 11:29:23] ./runpilot2-wrapper.sh: line 10: date: command not found
[2025-07-22 11:29:23] ==== wrapper stderr END ====
[2025-07-22 11:29:23] *** Error codes and diagnostics ***
[2025-07-22 11:29:23] *** Listing of results directory ***
[2025-07-22 11:29:23] total 316856
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 5112 Jul 22 05:53 queuedata.json
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 530466 Jul 22 05:54 pilot3.tar.gz
[2025-07-22 11:29:23] -rwx------ 1 boinc boinc 36292 Jul 22 05:55 runpilot2-wrapper.sh
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 100 Jul 22 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 11:29:23] -rwxr-xr-x 1 boinc boinc 7986 Jul 22 11:22 run_atlas
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 105 Jul 22 11:22 job.xml
[2025-07-22 11:29:23] -rw-r--r-- 2 boinc boinc 320491275 Jul 22 11:22 EVNT.45697451._000175.pool.root.1
[2025-07-22 11:29:23] drwxrwx--x 2 boinc boinc 4096 Jul 22 11:22 shared
[2025-07-22 11:29:23] -rw-r--r-- 2 boinc boinc 542899 Jul 22 11:22 input.tar.gz
[2025-07-22 11:29:23] -rw-r--r-- 2 boinc boinc 15095 Jul 22 11:22 start_atlas.sh
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 0 Jul 22 11:22 boinc_setup_complete
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 6271 Jul 22 11:22 init_data.xml
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 0 Jul 22 11:22 boinc_lockfile
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 2634 Jul 22 11:22 pandaJob.out
[2025-07-22 11:29:23] -rw------- 1 boinc boinc 976638 Jul 22 11:23 agis_schedconf.cvmfs.json
[2025-07-22 11:29:23] -rw------- 1 boinc boinc 1593031 Jul 22 11:23 agis_ddmendpoints.agis.ALL.json
[2025-07-22 11:29:23] drwx------ 4 boinc boinc 4096 Jul 22 11:23 pilot3
[2025-07-22 11:29:23] -rw------- 1 boinc boinc 736 Jul 22 11:26 heartbeat.json
[2025-07-22 11:29:23] -rw------- 1 boinc boinc 95 Jul 22 11:26 pilot_heartbeat.json
[2025-07-22 11:29:23] -rw------- 1 boinc boinc 943 Jul 22 11:26 memory_monitor_summary.json
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 522 Jul 22 11:26 boinc_task_state.xml
[2025-07-22 11:29:23] drwxrwx--- 2 boinc boinc 4096 Jul 22 11:27 PanDA_Pilot-6741714837
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 8192 Jul 22 11:28 boinc_mmap_file
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 22 Jul 22 11:28 wrapper_checkpoint.txt
[2025-07-22 11:29:23] -rw------- 1 boinc boinc 55235 Jul 22 11:29 pilotlog.txt
[2025-07-22 11:29:23] -rw------- 1 boinc boinc 72958 Jul 22 11:29 log.45697453._004359.job.log.1
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 428 Jul 22 11:29 runtime_log
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 8610 Jul 22 11:29 runtime_log.err
[2025-07-22 11:29:23] -rw------- 1 boinc boinc 623 Jul 22 11:29 LCjLDmPHJy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBIILDmadVtXn.diag
[2025-07-22 11:29:23] -rw-r--r-- 1 boinc boinc 27519 Jul 22 11:29 stderr.txt
[2025-07-22 11:29:23] No HITS result produced
[2025-07-22 11:29:23] *** Contents of shared directory: ***
[2025-07-22 11:29:23] total 313528
[2025-07-22 11:29:23] -rw-r--r-- 2 boinc boinc 320491275 Jul 22 11:22 ATLAS.root_0
[2025-07-22 11:29:23] -rw-r--r-- 2 boinc boinc 542899 Jul 22 11:22 input.tar.gz
[2025-07-22 11:29:23] -rw-r--r-- 2 boinc boinc 15095 Jul 22 11:22 start_atlas.sh
11:29:25 (2994473): run_atlas exited; CPU time 18.778700
11:29:25 (2994473): called boinc_finish(0)
</stderr_txt>
<message>
upload failure: <file_xfer_error>
<file_name>LCjLDmPHJy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBIILDmadVtXn_1_r21357599_ATLAS_result</file_name>
<error_code>-161 (not found)</error_code>
</file_xfer_error>
</message>
]]>
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