Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:31:12 (1389035): wrapper (7.7.26015): starting
02:31:12 (1389035): wrapper: running run_atlas (--nthreads 12)
[2025-07-22 02:31:12] Arguments: --nthreads 12
[2025-07-22 02:31:12] Threads: 12
[2025-07-22 02:31:12] Checking for CVMFS
[2025-07-22 02:31:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 02:31:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 02:31:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 02:31:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 02:31:14] 2.11.5.0 7364 29763 206584 148616 1 381 26918098 45568000 21287 130560 0 209505246 99.733 168037628 25647 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-22 02:31:14] CVMFS is ok
[2025-07-22 02:31:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 02:31:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 02:31:14] Further information can be found at the LHC@home message board.
[2025-07-22 02:31:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 02:31:14] Checking for apptainer binary...
[2025-07-22 02:31:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 02:31:14] Running /usr/bin/apptainer --version
[2025-07-22 02:31:14] apptainer version 1.4.1-1.el9
[2025-07-22 02:31:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 02:31:15] wns0080.triumf.lcg
[2025-07-22 02:31:15] apptainer works
[2025-07-22 02:31:15] Set ATHENA_PROC_NUMBER=12
[2025-07-22 02:31:15] Set ATHENA_CORE_NUMBER=12
[2025-07-22 02:31:15] Starting ATLAS job with PandaID=6741743603
[2025-07-22 02:31:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 02:35:54]  *** The last 200 lines of the pilot log: ***
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | WARNING  | wrong length of table data, x=[1753176766.0], y=[1523.0] (must be same and length>=4)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | ..............................
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . Timing measurements:
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . get job = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . initial setup = 3 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . payload setup = 15 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . stage-in = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . payload execution = 40 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . stage-out = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . log creation = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | ..............................
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741743603/pilotlog.txt
[2025-07-22 02:35:54] 2025-07-22 09:35:20,822 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 02:35:54] - Log from pilotlog.txt -
[2025-07-22 02:35:54] 2025-07-22 09:35:20,808 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741743603/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | INFO     | extracted standard info from prmon json
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | WARNING  | wrong length of table data, x=[1753176766.0], y=[1523.0] (must be same and length>=4)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | ..............................
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . Timing measurements:
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . get job = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . initial setup = 3 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . payload setup = 15 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . stage-in = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . payload execution = 40 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . stage-out = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . log creation = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | ..............................
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741743603/pilotlog.txt
[2025-07-22 02:35:54] 2025-07-22 09:35:20,822 | WARNING  | 
[2025-07-22 02:35:54] [begin log extracts]
[2025-07-22 02:35:54] - Log from pilotlog.txt -
[2025-07-22 02:35:54] 2025-07-22 09:35:20,808 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741743603/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | INFO     | extracted standard info from prmon json
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 02:35:54] 2025-07-22 09:35:20,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | WARNING  | wrong length of table data, x=[1753176766.0], y=[1523.0] (must be same and length>=4)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,810 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | ..............................
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . Timing measurements:
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . get job = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . initial setup = 3 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . payload setup = 15 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . stage-in = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . payload execution = 40 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . stage-out = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | . log creation = 0 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | ..............................
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 02:35:54] 2025-07-22 09:35:20,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741743603/pilotlog.txt
[2025-07-22 02:35:54] [end log extracts]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,822 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,823 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | 
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | job summary report
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | --------------------------------------------------
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | PanDA job id: 6741743603
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | task id: 45697472
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 02:33:04,434 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | pilot state: failed 
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | transexitcode: 65
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | exeerrorcode: 65
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | exitcode: 65
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | nevents: 0
[2025-07-22 02:35:54] 2025-07-22 09:35:20,883 | INFO     | neventsw: 0
[2025-07-22 02:35:54] 2025-07-22 09:35:20,884 | INFO     | pid: 1404279
[2025-07-22 02:35:54] 2025-07-22 09:35:20,884 | INFO     | pgrp: 1404279
[2025-07-22 02:35:54] 2025-07-22 09:35:20,884 | INFO     | corecount: 12
[2025-07-22 02:35:54] 2025-07-22 09:35:20,884 | INFO     | event service: False
[2025-07-22 02:35:54] 2025-07-22 09:35:20,884 | INFO     | sizes: {0: 2397525, 11: 2397815, 22: 2397815, 59: 2421136, 60: 2425432, 63: 2425432, 187: 2425726}
[2025-07-22 02:35:54] 2025-07-22 09:35:20,884 | INFO     | --------------------------------------------------
[2025-07-22 02:35:54] 2025-07-22 09:35:20,884 | INFO     | 
[2025-07-22 02:35:54] 2025-07-22 09:35:20,884 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 02:35:54] 2025-07-22 09:35:20,905 | INFO     | job 6741743603 has completed (purged errors)
[2025-07-22 02:35:54] 2025-07-22 09:35:20,905 | INFO     | overall cleanup function is called
[2025-07-22 02:35:54] 2025-07-22 09:35:21,910 | INFO     | --- collectZombieJob: --- 10, [1404279]
[2025-07-22 02:35:54] 2025-07-22 09:35:21,911 | INFO     | zombie collector waiting for pid 1404279
[2025-07-22 02:35:54] 2025-07-22 09:35:21,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 02:35:54] 2025-07-22 09:35:21,911 | INFO     | collected zombie processes
[2025-07-22 02:35:54] 2025-07-22 09:35:21,911 | INFO     | will attempt to kill all subprocesses of pid=1404279
[2025-07-22 02:35:54] 2025-07-22 09:35:22,190 | INFO     | process IDs to be killed: [1404279] (in reverse order)
[2025-07-22 02:35:54] 2025-07-22 09:35:22,518 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 02:35:54] 2025-07-22 09:35:22,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 02:35:54] 2025-07-22 09:35:22,546 | INFO     | did not find any defunct processes belonging to 1404279
[2025-07-22 02:35:54] 2025-07-22 09:35:22,572 | INFO     | did not find any defunct processes belonging to 1404279
[2025-07-22 02:35:54] 2025-07-22 09:35:22,572 | INFO     | ready for new job
[2025-07-22 02:35:54] 2025-07-22 09:35:22,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 02:35:54] 2025-07-22 09:35:22,592 | INFO     | ***************************************
[2025-07-22 02:35:54] 2025-07-22 09:35:22,592 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 02:35:54] 2025-07-22 09:35:22,592 | INFO     | ***************************************
[2025-07-22 02:35:54] 2025-07-22 09:35:22,592 | INFO     | 
[2025-07-22 02:35:54] 2025-07-22 09:35:22,594 | INFO     | architecture information:
[2025-07-22 02:35:54] 2025-07-22 09:35:22,609 | INFO     | executing command: cat /etc/os-release
[2025-07-22 02:35:54] 2025-07-22 09:35:22,683 | INFO     | cat /etc/os-release:
[2025-07-22 02:35:54] NAME="CentOS Linux"
[2025-07-22 02:35:54] VERSION="7 (Core)"
[2025-07-22 02:35:54] ID="centos"
[2025-07-22 02:35:54] ID_LIKE="rhel fedora"
[2025-07-22 02:35:54] VERSION_ID="7"
[2025-07-22 02:35:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 02:35:54] ANSI_COLOR="0;31"
[2025-07-22 02:35:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 02:35:54] HOME_URL="https://www.centos.org/"
[2025-07-22 02:35:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 02:35:54] 
[2025-07-22 02:35:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 02:35:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 02:35:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 02:35:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 02:35:54] 
[2025-07-22 02:35:54] 2025-07-22 09:35:22,683 | INFO     | ***************************************
[2025-07-22 02:35:54] 2025-07-22 09:35:23,187 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 02:35:54] 2025-07-22 09:35:23,200 | INFO     | sufficient remaining disk space (1696101040128 B)
[2025-07-22 02:35:54] 2025-07-22 09:35:23,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 02:35:54] 2025-07-22 09:35:23,201 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 02:35:54] 2025-07-22 09:35:23,201 | INFO     | update_server=False
[2025-07-22 02:35:54] 2025-07-22 09:35:23,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 02:35:54] 2025-07-22 09:35:23,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 02:35:54] 2025-07-22 09:35:23,457 | INFO     | all data control threads have been joined
[2025-07-22 02:35:54] 2025-07-22 09:35:23,550 | INFO     | all job control threads have been joined
[2025-07-22 02:35:54] 2025-07-22 09:35:23,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 02:35:54] 2025-07-22 09:35:23,888 | INFO     | aborting loop
[2025-07-22 02:35:54] 2025-07-22 09:35:24,207 | INFO     | [job] retrieve thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:24,320 | INFO     | all payload control threads have been joined
[2025-07-22 02:35:54] 2025-07-22 09:35:24,404 | INFO     | [data] copytool_in thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:24,445 | INFO     | [payload] validate_post thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:24,463 | INFO     | [data] control thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:24,557 | INFO     | [job] control thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:24,728 | INFO     | [job] validate thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:24,819 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:24,893 | INFO     | [job] job monitor thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:25,107 | INFO     | [payload] failed_post thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:25,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 02:35:54] 2025-07-22 09:35:25,208 | INFO     | [data] copytool_out thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:25,239 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:25,326 | INFO     | [payload] control thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:25,368 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:25,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:25,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 02:35:54] 2025-07-22 09:35:26,902 | INFO     | [job] queue monitor thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:29,174 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 02:35:54] 2025-07-22 09:35:30,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139792944969536)>', '<ExcThread(monitor, started 139792545191680)>']
[2025-07-22 02:35:54] 2025-07-22 09:35:35,654 | INFO     | all workflow threads have been joined
[2025-07-22 02:35:54] 2025-07-22 09:35:35,655 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 02:35:54] 2025-07-22 09:35:35,655 | INFO     | traces error code: 0
[2025-07-22 02:35:54] 2025-07-22 09:35:35,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 02:35:54] 2025-07-22 09:35:54,121 | INFO     | PID=1392680 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 02:35:54] 2025-07-22 09:35:54,121 | INFO     | .. there are 48 such processes running
[2025-07-22 02:35:54] 2025-07-22 09:35:54,121 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 02:35:54] 2025-07-22 09:35:54,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 02:35:54] 2025-07-22 09:35:54,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 02:35:54] 2025-07-22 09:35:54,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 02:35:54] 2025-07-22 09:35:54,122 | INFO     | [monitor] control thread has ended
[2025-07-22 02:35:54] 2025-07-22 09:35:54,256 [wrapper] ==== pilot stdout END ====
[2025-07-22 02:35:54] 2025-07-22 09:35:54,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 02:35:54] 2025-07-22 09:35:54,267 [wrapper] pilotpid: 1392680
[2025-07-22 02:35:54] 2025-07-22 09:35:54,270 [wrapper] Pilot exit status: 0
[2025-07-22 02:35:54] 2025-07-22 09:35:54,317 [wrapper] pandaids: 6741743603
[2025-07-22 02:35:54] 2025-07-22 09:35:54,405 [wrapper] cleanup supervisor_pilot 1392686 1392681
[2025-07-22 02:35:54] 2025-07-22 09:35:54,407 [wrapper] Test setup, not cleaning
[2025-07-22 02:35:54] 2025-07-22 09:35:54,409 [wrapper] apfmon messages muted
[2025-07-22 02:35:54] 2025-07-22 09:35:54,411 [wrapper] ==== wrapper stdout END ====
[2025-07-22 02:35:54] 2025-07-22 09:35:54,412 [wrapper] ==== wrapper stderr END ====
[2025-07-22 02:35:54]  *** Error codes and diagnostics ***
[2025-07-22 02:35:54]     "exeErrorCode": 65,
[2025-07-22 02:35:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 02:35:54]     "pilotErrorCode": 1305,
[2025-07-22 02:35:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 02:35:54]  *** Listing of results directory ***
[2025-07-22 02:35:54] total 327636
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc    530466 Jul 21 22:51 pilot3.tar.gz
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc      5112 Jul 21 23:20 queuedata.json
[2025-07-22 02:35:54] -rwx------. 1 boinc boinc     36292 Jul 21 23:21 runpilot2-wrapper.sh
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc       100 Jul 22 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 02:35:54] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 02:31 run_atlas
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc       105 Jul 22 02:31 job.xml
[2025-07-22 02:35:54] -rw-r--r--. 2 boinc boinc 331422076 Jul 22 02:31 EVNT.45697470._000022.pool.root.1
[2025-07-22 02:35:54] -rw-r--r--. 2 boinc boinc    542903 Jul 22 02:31 input.tar.gz
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc      6596 Jul 22 02:31 init_data.xml
[2025-07-22 02:35:54] -rw-r--r--. 2 boinc boinc     15095 Jul 22 02:31 start_atlas.sh
[2025-07-22 02:35:54] drwxrwx--x. 2 boinc boinc      4096 Jul 22 02:31 shared
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc         0 Jul 22 02:31 boinc_lockfile
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc      2609 Jul 22 02:31 pandaJob.out
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc    976638 Jul 22 02:31 agis_schedconf.cvmfs.json
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc   1593031 Jul 22 02:31 agis_ddmendpoints.agis.ALL.json
[2025-07-22 02:35:54] drwx------. 4 boinc boinc      4096 Jul 22 02:31 pilot3
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc       974 Jul 22 02:33 memory_monitor_summary.json
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc     21567 Jul 22 02:33 log.45697472._000538.job.log.tgz.1
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc      8412 Jul 22 02:35 heartbeat.json
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc      8192 Jul 22 02:35 boinc_mmap_file
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc        22 Jul 22 02:35 wrapper_checkpoint.txt
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc       523 Jul 22 02:35 boinc_task_state.xml
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc        95 Jul 22 02:35 pilot_heartbeat.json
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc       823 Jul 22 02:35 pilotlog.txt
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc     79206 Jul 22 02:35 log.45697472._000538.job.log.1
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc       188 Jul 22 02:35 output.list
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc       620 Jul 22 02:35 runtime_log
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc    122880 Jul 22 02:35 result.tar.gz
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc       644 Jul 22 02:35 xvPKDmYYLy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGgILDmSjFkdm.diag
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc      8485 Jul 22 02:35 runtime_log.err
[2025-07-22 02:35:54] -rw-r--r--. 1 boinc boinc     21792 Jul 22 02:35 stderr.txt
[2025-07-22 02:35:54] No HITS result produced
[2025-07-22 02:35:54]  *** Contents of shared directory: ***
[2025-07-22 02:35:54] total 324328
[2025-07-22 02:35:54] -rw-r--r--. 2 boinc boinc 331422076 Jul 22 02:31 ATLAS.root_0
[2025-07-22 02:35:54] -rw-r--r--. 2 boinc boinc    542903 Jul 22 02:31 input.tar.gz
[2025-07-22 02:35:54] -rw-r--r--. 2 boinc boinc     15095 Jul 22 02:31 start_atlas.sh
[2025-07-22 02:35:54] -rw-------. 1 boinc boinc    122880 Jul 22 02:35 result.tar.gz
02:35:55 (1389035): run_atlas exited; CPU time 25.385589
02:35:55 (1389035): called boinc_finish(0)

</stderr_txt>
]]>

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