Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:07:15 (2665389): wrapper (7.7.26015): starting
02:07:15 (2665389): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 02:07:15] Arguments: --nthreads 8
[2025-07-22 02:07:15] Threads: 8
[2025-07-22 02:07:15] Checking for CVMFS
[2025-07-22 02:07:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 02:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 02:07:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 02:07:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 02:07:17] 2.11.3.0 449023 272776 217740 148614 0 410 27845599 45568001 13454 130560 0 1683554049 99.753 1412142820 20275 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-22 02:07:17] CVMFS is ok
[2025-07-22 02:07:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 02:07:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 02:07:17] Further information can be found at the LHC@home message board.
[2025-07-22 02:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 02:07:17] Checking for apptainer binary...
[2025-07-22 02:07:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 02:07:17] Running /usr/bin/apptainer --version
[2025-07-22 02:07:17] apptainer version 1.3.3-1.el9
[2025-07-22 02:07:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 02:07:17] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0009.triumf.lcg
[2025-07-22 02:07:17] apptainer works
[2025-07-22 02:07:17] Set ATHENA_PROC_NUMBER=8
[2025-07-22 02:07:17] Set ATHENA_CORE_NUMBER=8
[2025-07-22 02:07:17] Starting ATLAS job with PandaID=6741743519
[2025-07-22 02:07:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 02:11:51]  *** The last 200 lines of the pilot log: ***
[2025-07-22 02:11:51] 2025-07-22 09:11:16,105 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 02:11:51] 2025-07-22 09:11:16,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 02:11:51] 2025-07-22 09:11:16,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 02:11:51] 2025-07-22 09:11:16,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 02:11:51] 2025-07-22 09:11:16,123 | WARNING  | wrong length of table data, x=[1753175317.0], y=[1927.0] (must be same and length>=4)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | ..............................
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . Timing measurements:
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . get job = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . initial setup = 3 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . payload setup = 13 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . stage-in = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . payload execution = 38 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . stage-out = 1 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . log creation = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | ..............................
[2025-07-22 02:11:51] 2025-07-22 09:11:16,125 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 02:11:51] 2025-07-22 09:11:16,125 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741743519/pilotlog.txt
[2025-07-22 02:11:51] 2025-07-22 09:11:16,212 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-22 02:11:51] - Log from pilotlog.txt -
[2025-07-22 02:11:51] 2025-07-22 09:11:16,104 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741743519/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,105 | INFO     | extracted standard info from prmon json
[2025-07-22 02:11:51] 2025-07-22 09:11:16,105 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 02:11:51] 2025-07-22 09:11:16,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 02:11:51] 2025-07-22 09:11:16,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 02:11:51] 2025-07-22 09:11:16,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 02:11:51] 2025-07-22 09:11:16,123 | WARNING  | wrong length of table data, x=[1753175317.0], y=[1927.0] (must be same and length>=4)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | ..............................
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . Timing measurements:
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . get job = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . initial setup = 3 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . payload setup = 13 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . stage-in = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . payload execution = 38 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . stage-out = 1 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . log creation = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | ..............................
[2025-07-22 02:11:51] 2025-07-22 09:11:16,125 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 02:11:51] 2025-07-22 09:11:16,125 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741743519/pilotlog.txt
[2025-07-22 02:11:51] 2025-07-22 09:11:16,213 | WARNING  | 
[2025-07-22 02:11:51] [begin log extracts]
[2025-07-22 02:11:51] - Log from pilotlog.txt -
[2025-07-22 02:11:51] 2025-07-22 09:11:16,104 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741743519/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,105 | INFO     | extracted standard info from prmon json
[2025-07-22 02:11:51] 2025-07-22 09:11:16,105 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 02:11:51] 2025-07-22 09:11:16,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 02:11:51] 2025-07-22 09:11:16,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 02:11:51] 2025-07-22 09:11:16,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 02:11:51] 2025-07-22 09:11:16,123 | WARNING  | wrong length of table data, x=[1753175317.0], y=[1927.0] (must be same and length>=4)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | ..............................
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . Timing measurements:
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . get job = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . initial setup = 3 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . payload setup = 13 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . stage-in = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . payload execution = 38 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . stage-out = 1 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | . log creation = 0 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,124 | INFO     | ..............................
[2025-07-22 02:11:51] 2025-07-22 09:11:16,125 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-22 02:11:51] 2025-07-22 09:11:16,125 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741743519/pilotlog.txt
[2025-07-22 02:11:51] [end log extracts]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,213 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,214 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-22 02:11:51] 2025-07-22 09:11:16,556 | INFO     | 
[2025-07-22 02:11:51] 2025-07-22 09:11:16,556 | INFO     | job summary report
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | --------------------------------------------------
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | PanDA job id: 6741743519
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | task id: 45697472
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-22 02:09:00,668 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | pilot state: failed 
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | transexitcode: 65
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | exeerrorcode: 65
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | exitcode: 65
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,557 | INFO     | cpuconsumptiontime: 17 s
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | nevents: 0
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | neventsw: 0
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | pid: 2684426
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | pgrp: 2684426
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | corecount: 8
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | event service: False
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | sizes: {0: 2397354, 1: 2397553, 11: 2397553, 13: 2397843, 23: 2397899, 56: 2421372, 57: 2425664, 59: 2425692, 183: 2425858}
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | --------------------------------------------------
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | 
[2025-07-22 02:11:51] 2025-07-22 09:11:16,558 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-22 02:11:51] 2025-07-22 09:11:16,643 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | job 6741743519 has completed (purged errors)
[2025-07-22 02:11:51] 2025-07-22 09:11:16,645 | INFO     | overall cleanup function is called
[2025-07-22 02:11:51] 2025-07-22 09:11:17,667 | INFO     | --- collectZombieJob: --- 10, [2684426]
[2025-07-22 02:11:51] 2025-07-22 09:11:17,667 | INFO     | zombie collector waiting for pid 2684426
[2025-07-22 02:11:51] 2025-07-22 09:11:17,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 02:11:51] 2025-07-22 09:11:17,668 | INFO     | collected zombie processes
[2025-07-22 02:11:51] 2025-07-22 09:11:17,668 | INFO     | will attempt to kill all subprocesses of pid=2684426
[2025-07-22 02:11:51] 2025-07-22 09:11:18,007 | INFO     | process IDs to be killed: [2684426] (in reverse order)
[2025-07-22 02:11:51] 2025-07-22 09:11:18,085 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 02:11:51] 2025-07-22 09:11:18,086 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 02:11:51] 2025-07-22 09:11:18,095 | INFO     | did not find any defunct processes belonging to 2684426
[2025-07-22 02:11:51] 2025-07-22 09:11:18,103 | INFO     | did not find any defunct processes belonging to 2684426
[2025-07-22 02:11:51] 2025-07-22 09:11:18,103 | INFO     | ready for new job
[2025-07-22 02:11:51] 2025-07-22 09:11:18,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 02:11:51] 2025-07-22 09:11:18,105 | INFO     | ***************************************
[2025-07-22 02:11:51] 2025-07-22 09:11:18,105 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 02:11:51] 2025-07-22 09:11:18,105 | INFO     | ***************************************
[2025-07-22 02:11:51] 2025-07-22 09:11:18,105 | INFO     | 
[2025-07-22 02:11:51] 2025-07-22 09:11:18,119 | INFO     | architecture information:
[2025-07-22 02:11:51] 2025-07-22 09:11:18,119 | INFO     | executing command: cat /etc/os-release
[2025-07-22 02:11:51] 2025-07-22 09:11:18,131 | INFO     | cat /etc/os-release:
[2025-07-22 02:11:51] NAME="CentOS Linux"
[2025-07-22 02:11:51] VERSION="7 (Core)"
[2025-07-22 02:11:51] ID="centos"
[2025-07-22 02:11:51] ID_LIKE="rhel fedora"
[2025-07-22 02:11:51] VERSION_ID="7"
[2025-07-22 02:11:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 02:11:51] ANSI_COLOR="0;31"
[2025-07-22 02:11:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 02:11:51] HOME_URL="https://www.centos.org/"
[2025-07-22 02:11:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 02:11:51] 
[2025-07-22 02:11:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 02:11:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 02:11:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 02:11:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 02:11:51] 
[2025-07-22 02:11:51] 2025-07-22 09:11:18,131 | INFO     | ***************************************
[2025-07-22 02:11:51] 2025-07-22 09:11:18,635 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-22 02:11:51] 2025-07-22 09:11:18,759 | INFO     | sufficient remaining disk space (1170986762240 B)
[2025-07-22 02:11:51] 2025-07-22 09:11:18,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 02:11:51] 2025-07-22 09:11:18,760 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 02:11:51] 2025-07-22 09:11:18,760 | INFO     | update_server=False
[2025-07-22 02:11:51] 2025-07-22 09:11:18,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 02:11:51] 2025-07-22 09:11:18,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 02:11:51] 2025-07-22 09:11:18,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 02:11:51] 2025-07-22 09:11:18,780 | INFO     | aborting loop
[2025-07-22 02:11:51] 2025-07-22 09:11:19,315 | INFO     | all payload control threads have been joined
[2025-07-22 02:11:51] 2025-07-22 09:11:19,629 | INFO     | all job control threads have been joined
[2025-07-22 02:11:51] 2025-07-22 09:11:19,632 | INFO     | all data control threads have been joined
[2025-07-22 02:11:51] 2025-07-22 09:11:19,766 | INFO     | [job] retrieve thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:19,786 | INFO     | [job] job monitor thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:19,845 | INFO     | [payload] validate_post thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,273 | INFO     | [job] validate thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,321 | INFO     | [payload] control thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,482 | INFO     | [payload] failed_post thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 02:11:51] 2025-07-22 09:11:20,617 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,635 | INFO     | [job] control thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,637 | INFO     | [data] control thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,673 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,707 | INFO     | [data] copytool_in thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,708 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:20,784 | INFO     | [data] copytool_out thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:21,122 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:21,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 02:11:51] 2025-07-22 09:11:22,575 | INFO     | [job] queue monitor thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:24,499 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 02:11:51] 2025-07-22 09:11:26,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288299407168)>', '<ExcThread(monitor, started 140287229806336)>']
[2025-07-22 02:11:51] 2025-07-22 09:11:31,298 | INFO     | all workflow threads have been joined
[2025-07-22 02:11:51] 2025-07-22 09:11:31,298 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 02:11:51] 2025-07-22 09:11:31,299 | INFO     | traces error code: 0
[2025-07-22 02:11:51] 2025-07-22 09:11:31,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 02:11:51] 2025-07-22 09:11:50,625 | INFO     | PID=2670924 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 02:11:51] 2025-07-22 09:11:50,625 | INFO     | .. there are 33 such processes running
[2025-07-22 02:11:51] 2025-07-22 09:11:50,627 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 02:11:51] 2025-07-22 09:11:50,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 02:11:51] 2025-07-22 09:11:50,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 02:11:51] 2025-07-22 09:11:50,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 02:11:51] 2025-07-22 09:11:50,627 | INFO     | [monitor] control thread has ended
[2025-07-22 02:11:51] 2025-07-22 09:11:50,928 [wrapper] ==== pilot stdout END ====
[2025-07-22 02:11:51] 2025-07-22 09:11:50,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 02:11:51] 2025-07-22 09:11:50,932 [wrapper] pilotpid: 2670924
[2025-07-22 02:11:51] 2025-07-22 09:11:50,934 [wrapper] Pilot exit status: 0
[2025-07-22 02:11:51] 2025-07-22 09:11:50,943 [wrapper] pandaids: 6741743519
[2025-07-22 02:11:51] 2025-07-22 09:11:50,993 [wrapper] cleanup supervisor_pilot 2670930 2670925
[2025-07-22 02:11:51] 2025-07-22 09:11:50,995 [wrapper] Test setup, not cleaning
[2025-07-22 02:11:51] 2025-07-22 09:11:50,998 [wrapper] apfmon messages muted
[2025-07-22 02:11:51] 2025-07-22 09:11:51,024 [wrapper] ==== wrapper stdout END ====
[2025-07-22 02:11:51] 2025-07-22 09:11:51,032 [wrapper] ==== wrapper stderr END ====
[2025-07-22 02:11:51]  *** Error codes and diagnostics ***
[2025-07-22 02:11:51]     "exeErrorCode": 65,
[2025-07-22 02:11:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 02:11:51]     "pilotErrorCode": 1305,
[2025-07-22 02:11:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-22 02:11:51]  *** Listing of results directory ***
[2025-07-22 02:11:51] total 329192
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc    530466 Jul 21 22:51 pilot3.tar.gz
[2025-07-22 02:11:51] -rwx------. 1 boinc boinc     36292 Jul 21 23:17 runpilot2-wrapper.sh
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc      5112 Jul 21 23:17 queuedata.json
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc       100 Jul 22 02:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 02:11:51] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 02:07 run_atlas
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc       105 Jul 22 02:07 job.xml
[2025-07-22 02:11:51] -rw-r--r--. 2 boinc boinc 333034995 Jul 22 02:07 EVNT.45697470._000019.pool.root.1
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc      6447 Jul 22 02:07 init_data.xml
[2025-07-22 02:11:51] drwxrwx--x. 2 boinc boinc      4096 Jul 22 02:07 shared
[2025-07-22 02:11:51] -rw-r--r--. 2 boinc boinc    542892 Jul 22 02:07 input.tar.gz
[2025-07-22 02:11:51] -rw-r--r--. 2 boinc boinc     15095 Jul 22 02:07 start_atlas.sh
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc         0 Jul 22 02:07 boinc_lockfile
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc      2609 Jul 22 02:07 pandaJob.out
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc    976662 Jul 22 02:07 agis_schedconf.cvmfs.json
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc   1593031 Jul 22 02:07 agis_ddmendpoints.agis.ALL.json
[2025-07-22 02:11:51] drwx------. 4 boinc boinc      4096 Jul 22 02:07 pilot3
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc       525 Jul 22 02:08 boinc_task_state.xml
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc       954 Jul 22 02:09 memory_monitor_summary.json
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc     21346 Jul 22 02:09 log.45697472._000454.job.log.tgz.1
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc      8421 Jul 22 02:11 heartbeat.json
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc      8192 Jul 22 02:11 boinc_mmap_file
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc        23 Jul 22 02:11 wrapper_checkpoint.txt
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc        95 Jul 22 02:11 pilot_heartbeat.json
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc       823 Jul 22 02:11 pilotlog.txt
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc     78750 Jul 22 02:11 log.45697472._000454.job.log.1
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc       188 Jul 22 02:11 output.list
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc       620 Jul 22 02:11 runtime_log
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc    122880 Jul 22 02:11 result.tar.gz
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc      8648 Jul 22 02:11 runtime_log.err
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc       645 Jul 22 02:11 r9lNDmJULy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4ZuKDmAxUPMo.diag
[2025-07-22 02:11:51] -rw-r--r--. 1 boinc boinc      2305 Jul 22 02:11 stderr.txt
[2025-07-22 02:11:51] No HITS result produced
[2025-07-22 02:11:51]  *** Contents of shared directory: ***
[2025-07-22 02:11:51] total 325904
[2025-07-22 02:11:51] -rw-r--r--. 2 boinc boinc 333034995 Jul 22 02:07 ATLAS.root_0
[2025-07-22 02:11:51] -rw-r--r--. 2 boinc boinc    542892 Jul 22 02:07 input.tar.gz
[2025-07-22 02:11:51] -rw-r--r--. 2 boinc boinc     15095 Jul 22 02:07 start_atlas.sh
[2025-07-22 02:11:51] -rw-------. 1 boinc boinc    122880 Jul 22 02:11 result.tar.gz
02:11:53 (2665389): run_atlas exited; CPU time 25.123160
02:11:53 (2665389): called boinc_finish(0)

</stderr_txt>
]]>

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