| Name | veILDmjvHy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsGuKDmJrCjln_1 |
| Workunit | 233726399 |
| Created | 22 Jul 2025, 5:07:33 UTC |
| Sent | 22 Jul 2025, 7:57:47 UTC |
| Report deadline | 30 Jul 2025, 7:57:47 UTC |
| Received | 22 Jul 2025, 8:16:59 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 0 (0x00000000) |
| Computer ID | 10871274 |
| Run time | 7 min 23 sec |
| CPU time | 18 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 22.08 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 68.90 MB |
| Peak swap size | 18.31 GB |
| Peak disk usage | 614.82 MB |
Stderr output
<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:58:06 (488964): wrapper (7.7.26015): starting
09:58:06 (488964): wrapper: running run_atlas (--nthreads 3)
[2025-07-22 09:58:06] Arguments: --nthreads 3
[2025-07-22 09:58:06] Threads: 3
[2025-07-22 09:58:06] Checking for CVMFS
[2025-07-22 09:58:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 09:58:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 09:58:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 09:58:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 09:58:09] 2.9.2.0 99829 3 30380 148613 0 5 8802257 36864001 0 130560 0 1 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-22 09:58:09] CVMFS is ok
[2025-07-22 09:58:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 09:58:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 09:58:09] Further information can be found at the LHC@home message board.
[2025-07-22 09:58:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 09:58:09] Checking for apptainer binary...
[2025-07-22 09:58:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 09:58:09] Running /usr/bin/apptainer --version
[2025-07-22 09:58:09] apptainer version 1.4.1-1.1
[2025-07-22 09:58:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 09:58:09] thA373
[2025-07-22 09:58:09] apptainer works
[2025-07-22 09:58:10] Set ATHENA_PROC_NUMBER=3
[2025-07-22 09:58:10] Set ATHENA_CORE_NUMBER=3
[2025-07-22 09:58:10] Starting ATLAS job with PandaID=6741712421
[2025-07-22 09:58:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 10:05:29] *** The last 200 lines of the pilot log: ***
[2025-07-22 10:05:29] process = subprocess.Popen(
[2025-07-22 10:05:29] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/lib/python3.9/subprocess.py", line 951, in __init__
[2025-07-22 10:05:29] self._execute_child(args, executable, preexec_fn, close_fds,
[2025-07-22 10:05:29] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/lib/python3.9/subprocess.py", line 1837, in _execute_child
[2025-07-22 10:05:29] raise child_exception_type(errno_num, err_msg, err_filename)
[2025-07-22 10:05:29] unexpected exception caught by thread run() function: (<class 'OSError'>, OSError(107, 'Transport endpoint is not connected'), <traceback object at 0x7f0bca791d00>)
[2025-07-22 10:05:29] Traceback (most recent call last):
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/common/exception.py", line 466, in run
[2025-07-22 10:05:29] self._target(**self.kwargs)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/data.py", line 637, in copytool_out
[2025-07-22 10:05:29] if _stage_out_new(job, args):
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/data.py", line 1043, in _stage_out_new
[2025-07-22 10:05:29] create_log(job.workdir, logfile.lfn, tarball_name, args.cleanup,
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/data.py", line 775, in create_log
[2025-07-22 10:05:29] user.remove_redundant_files(workdir, piloterrors=piloterrors, debugmode=debugmode)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/user/atlas/common.py", line 2168, in remove_redundant_files
[2025-07-22 10:05:29] list_work_dir(workdir)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/user/atlas/common.py", line 2074, in list_work_dir
[2025-07-22 10:05:29] _, stdout, stderr = execute(cmd)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/util/container.py", line 88, in execute
[2025-07-22 10:05:29] process = subprocess.Popen(
[2025-07-22 10:05:29] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/lib/python3.9/subprocess.py", line 951, in __init__
[2025-07-22 10:05:29] self._execute_child(args, executable, preexec_fn, close_fds,
[2025-07-22 10:05:29] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/lib/python3.9/subprocess.py", line 1837, in _execute_child
[2025-07-22 10:05:29] raise child_exception_type(errno_num, err_msg, err_filename)
[2025-07-22 10:05:29] OSError: [Errno 107] Transport endpoint is not connected: '/bin/bash'
[2025-07-22 10:05:29]
[2025-07-22 10:05:29] None
[2025-07-22 10:05:29] exception has been put in bucket queue belonging to thread 'copytool_out'
[2025-07-22 10:05:29] setting graceful stop in 10 s since there is no point in continuing
[2025-07-22 10:05:29] 2025-07-22 08:02:46,972 | WARNING | thread 'copytool_out' received an exception from bucket: [Errno 107] Transport endpoint is not connected: '/bin/bash'
[2025-07-22 10:05:29] 2025-07-22 08:02:47,141 | INFO | monitor loop #46: job 0:6741712421 is in state 'failed'
[2025-07-22 10:05:29] 2025-07-22 08:02:47,141 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-22 10:05:29] 2025-07-22 08:02:49,647 | INFO | monitor loop #47: job 0:6741712421 is in state 'failed'
[2025-07-22 10:05:29] 2025-07-22 08:02:49,647 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-22 10:05:29] 2025-07-22 08:02:52,152 | INFO | monitor loop #48: job 0:6741712421 is in state 'failed'
[2025-07-22 10:05:29] 2025-07-22 08:02:52,152 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-22 10:05:29] 2025-07-22 08:02:54,657 | INFO | monitor loop #49: job 0:6741712421 is in state 'failed'
[2025-07-22 10:05:29] 2025-07-22 08:02:54,657 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-22 10:05:29] 2025-07-22 08:02:56,222 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-22 10:05:29] 2025-07-22 08:02:56,223 | INFO | found 1 job(s) in 20 queues
[2025-07-22 10:05:29] 2025-07-22 08:02:56,223 | INFO | aborting job 6741712421
[2025-07-22 10:05:29] 2025-07-22 08:02:56,239 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 10:05:29] 2025-07-22 08:02:56,239 | INFO | aborting loop
[2025-07-22 10:05:29] 2025-07-22 08:02:56,337 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 10:05:29] 2025-07-22 08:02:56,337 | WARNING | since job:queue_monitor is responsible for sending job updates, we sleep for 20 s
[2025-07-22 10:05:29] 2025-07-22 08:02:56,704 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 10:05:29] 2025-07-22 08:02:56,704 | WARNING | will wait for a maximum of 300 s for threads to finish
[2025-07-22 10:05:29] 2025-07-22 08:02:56,787 | INFO | all data control threads have been joined
[2025-07-22 10:05:29] 2025-07-22 08:02:57,246 | INFO | [job] job monitor thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:57,255 | INFO | [job] create_data_payload thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:57,388 | INFO | [payload] validate_post thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:57,442 | INFO | all job control threads have been joined
[2025-07-22 10:05:29] 2025-07-22 08:02:57,598 | INFO | [job] retrieve thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:57,743 | INFO | all payload control threads have been joined
[2025-07-22 10:05:29] 2025-07-22 08:02:57,794 | INFO | [data] control thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:57,838 | INFO | [payload] run_realtimelog thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:57,915 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 10:05:29] 2025-07-22 08:02:57,992 | INFO | [payload] validate_pre thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:58,032 | INFO | [job] validate thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:58,317 | INFO | [payload] failed_post thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:58,391 | INFO | [data] copytool_in thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:58,447 | INFO | [job] control thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:02:58,750 | INFO | [payload] control thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:03:01,908 | INFO | [payload] execute_payloads thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:03:01,923 | INFO | [data] queue_monitor thread has finished
[2025-07-22 10:05:29] 2025-07-22 08:03:17,438 | INFO | job 6741712421 has state=failed
[2025-07-22 10:05:29] 2025-07-22 08:03:17,439 | INFO | preparing for final server update for job 6741712421 in state='failed'
[2025-07-22 10:05:29] 2025-07-22 08:03:17,848 | WARNING | job_aborted has been set - aborting pilot monitoring
[2025-07-22 10:05:29] 2025-07-22 08:03:17,848 | INFO | [monitor] control thread has ended
[2025-07-22 10:05:29] 2025-07-22 08:03:18,900 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:20,912 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:22,925 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:24,936 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:26,949 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:28,961 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:30,973 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:32,984 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:34,996 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:37,008 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:39,022 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:41,034 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:43,045 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:45,058 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:47,068 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:49,081 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:51,093 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:53,104 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:55,116 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:57,128 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:03:59,138 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:01,152 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:03,165 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:05,178 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:07,189 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:09,200 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:11,212 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:13,227 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:15,238 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:17,251 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:19,267 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:21,280 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:23,295 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:25,308 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:27,318 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:29,329 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:31,340 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:33,351 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:35,361 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:37,374 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:39,384 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:41,397 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:43,410 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:45,422 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:47,432 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:49,445 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:51,457 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:53,471 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:55,481 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:57,491 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:04:59,501 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:01,514 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:03,525 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:05,536 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:07,550 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:09,563 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:11,574 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:12,634 | INFO | proceeding with final server update
[2025-07-22 10:05:29] 2025-07-22 08:05:12,634 | INFO | this job has now completed (state=failed)
[2025-07-22 10:05:29] 2025-07-22 08:05:12,634 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2025-07-22 10:05:29] 2025-07-22 08:05:12,634 | INFO | log transfer has not been attempted: IN_PROGRESS
[2025-07-22 10:05:29] 2025-07-22 08:05:12,634 | INFO | job 6741712421 has state 'failed' - writing heartbeat
[2025-07-22 10:05:29] 2025-07-22 08:05:12,635 | INFO | payload/TRF did not report the number of read events
[2025-07-22 10:05:29] 2025-07-22 08:05:12,635 | WARNING | command=lscpu does not exist - cannot check number of available cores
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/common/exception.py", line 466, in run
[2025-07-22 10:05:29] self._target(**self.kwargs)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 2797, in queue_monitor
[2025-07-22 10:05:29] update_server(job, args)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 2846, in update_server
[2025-07-22 10:05:29] send_state(job, args, job.state, metadata=metadata)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 434, in send_state
[2025-07-22 10:05:29] data = get_data_structure(job, state, args, xml=xml, metadata=metadata)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 769, in get_data_structure
[2025-07-22 10:05:29] cpumodel = get_cpu_model() # ARM info will be corrected below if necessary (otherwise cpumodel will contain UNKNOWN)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/util/workernode.py", line 279, in get_cpu_model
[2025-07-22 10:05:29] with open("/proc/cpuinfo", "r") as _fp:
[2025-07-22 10:05:29] unexpected exception caught by thread run() function: (<class 'OSError'>, OSError(116, 'Stale file handle'), <traceback object at 0x7f0bcbb67fc0>)
[2025-07-22 10:05:29] Traceback (most recent call last):
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/common/exception.py", line 466, in run
[2025-07-22 10:05:29] self._target(**self.kwargs)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 2797, in queue_monitor
[2025-07-22 10:05:29] update_server(job, args)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 2846, in update_server
[2025-07-22 10:05:29] send_state(job, args, job.state, metadata=metadata)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 434, in send_state
[2025-07-22 10:05:29] data = get_data_structure(job, state, args, xml=xml, metadata=metadata)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/control/job.py", line 769, in get_data_structure
[2025-07-22 10:05:29] cpumodel = get_cpu_model() # ARM info will be corrected below if necessary (otherwise cpumodel will contain UNKNOWN)
[2025-07-22 10:05:29] File "/local/data/boinc/slots/0/pilot3/pilot/util/workernode.py", line 279, in get_cpu_model
[2025-07-22 10:05:29] with open("/proc/cpuinfo", "r") as _fp:
[2025-07-22 10:05:29] OSError: [Errno 116] Stale file handle: '/proc/cpuinfo'
[2025-07-22 10:05:29]
[2025-07-22 10:05:29] None
[2025-07-22 10:05:29] exception has been put in bucket queue belonging to thread 'queue_monitor'
[2025-07-22 10:05:29] setting graceful stop in 10 s since there is no point in continuing
[2025-07-22 10:05:29] 2025-07-22 08:05:13,585 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:15,597 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:17,609 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:19,620 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:21,631 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 139688703838016)>', '<ExcThread(queue_monitor, started 139688224478976)>']
[2025-07-22 10:05:29] 2025-07-22 08:05:23,645 | INFO | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 139688703838016)>'])
[2025-07-22 10:05:29] 2025-07-22 08:05:28,670 | INFO | all workflow threads have been joined
[2025-07-22 10:05:29] 2025-07-22 08:05:28,670 | INFO | end of generic workflow (traces error code: 0)
[2025-07-22 10:05:29] 2025-07-22 08:05:28,671 | INFO | traces error code: 0
[2025-07-22 10:05:29] 2025-07-22 08:05:28,671 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] ==== pilot stdout END ====
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] ==== wrapper stdout RESUME ====
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] pilotpid: 617420
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] Pilot exit status: 0
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 1018: /usr/bin/cat: Stale file handle
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 1018: cut: command not found
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 1018: xargs: command not found
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] pandaids:
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 27: ps: command not found
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] No supervise_pilot CHILD process found
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 36: /dev/null: Stale file handle
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] Test setup, not cleaning
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] apfmon messages muted
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 15: date: command not found
[2025-07-22 10:05:29] ==== wrapper stdout END ====
[2025-07-22 10:05:29] ./runpilot2-wrapper.sh: line 10: date: command not found
[2025-07-22 10:05:29] ==== wrapper stderr END ====
[2025-07-22 10:05:29] *** Error codes and diagnostics ***
[2025-07-22 10:05:29] *** Listing of results directory ***
[2025-07-22 10:05:29] total 314872
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 530466 Jul 22 04:19 pilot3.tar.gz
[2025-07-22 10:05:29] -rwx------ 1 boinc boinc 36292 Jul 22 04:29 runpilot2-wrapper.sh
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 5112 Jul 22 04:29 queuedata.json
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 100 Jul 22 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 10:05:29] -rwxr-xr-x 1 boinc boinc 7986 Jul 22 09:58 run_atlas
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 105 Jul 22 09:58 job.xml
[2025-07-22 10:05:29] -rw-r--r-- 2 boinc boinc 318452510 Jul 22 09:58 EVNT.45697451._000132.pool.root.1
[2025-07-22 10:05:29] -rw-r--r-- 2 boinc boinc 542903 Jul 22 09:58 input.tar.gz
[2025-07-22 10:05:29] -rw-r--r-- 2 boinc boinc 15095 Jul 22 09:58 start_atlas.sh
[2025-07-22 10:05:29] drwxrwx--x 2 boinc boinc 4096 Jul 22 09:58 shared
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 0 Jul 22 09:58 boinc_setup_complete
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 6271 Jul 22 09:58 init_data.xml
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 0 Jul 22 09:58 boinc_lockfile
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 2634 Jul 22 09:58 pandaJob.out
[2025-07-22 10:05:29] -rw------- 1 boinc boinc 977339 Jul 22 09:59 agis_schedconf.cvmfs.json
[2025-07-22 10:05:29] -rw------- 1 boinc boinc 1593055 Jul 22 09:59 agis_ddmendpoints.agis.ALL.json
[2025-07-22 10:05:29] drwx------ 4 boinc boinc 4096 Jul 22 09:59 pilot3
[2025-07-22 10:05:29] -rw------- 1 boinc boinc 735 Jul 22 10:02 heartbeat.json
[2025-07-22 10:05:29] -rw------- 1 boinc boinc 95 Jul 22 10:02 pilot_heartbeat.json
[2025-07-22 10:05:29] -rw------- 1 boinc boinc 936 Jul 22 10:02 memory_monitor_summary.json
[2025-07-22 10:05:29] drwxrwx--- 2 boinc boinc 4096 Jul 22 10:02 PanDA_Pilot-6741712421
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 523 Jul 22 10:02 boinc_task_state.xml
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 22 Jul 22 10:05 wrapper_checkpoint.txt
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 8192 Jul 22 10:05 boinc_mmap_file
[2025-07-22 10:05:29] -rw------- 1 boinc boinc 55531 Jul 22 10:05 pilotlog.txt
[2025-07-22 10:05:29] -rw------- 1 boinc boinc 73251 Jul 22 10:05 log.45697453._003297.job.log.1
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 428 Jul 22 10:05 runtime_log
[2025-07-22 10:05:29] -rw------- 1 boinc boinc 623 Jul 22 10:05 veILDmjvHy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsGuKDmJrCjln.diag
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 8610 Jul 22 10:05 runtime_log.err
[2025-07-22 10:05:29] -rw-r--r-- 1 boinc boinc 27859 Jul 22 10:05 stderr.txt
[2025-07-22 10:05:29] No HITS result produced
[2025-07-22 10:05:29] *** Contents of shared directory: ***
[2025-07-22 10:05:29] total 311544
[2025-07-22 10:05:29] -rw-r--r-- 2 boinc boinc 318452510 Jul 22 09:58 ATLAS.root_0
[2025-07-22 10:05:29] -rw-r--r-- 2 boinc boinc 542903 Jul 22 09:58 input.tar.gz
[2025-07-22 10:05:29] -rw-r--r-- 2 boinc boinc 15095 Jul 22 09:58 start_atlas.sh
10:05:30 (488964): run_atlas exited; CPU time 18.777852
10:05:30 (488964): called boinc_finish(0)
</stderr_txt>
<message>
upload failure: <file_xfer_error>
<file_name>veILDmjvHy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsGuKDmJrCjln_1_r17699403_ATLAS_result</file_name>
<error_code>-161 (not found)</error_code>
</file_xfer_error>
</message>
]]>
©2025 CERN