Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:42:48 (628077): wrapper (7.7.26015): starting
09:42:48 (628077): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 09:42:48] Arguments: --nthreads 12
[2025-07-24 09:42:48] Threads: 12
[2025-07-24 09:42:48] Checking for CVMFS
[2025-07-24 09:42:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 09:42:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 09:42:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 09:42:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 09:42:49] 2.13.0.0 1164766 3176 78460 148689 2 188 3730129 4096000 15565 130560 0 33536712 99.999 116434 229 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-24 09:42:49] CVMFS is ok
[2025-07-24 09:42:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 09:42:49] Checking for apptainer binary...
[2025-07-24 09:42:49] apptainer is not installed, using version from CVMFS
[2025-07-24 09:42:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 09:42:50] epyc7v12
[2025-07-24 09:42:50] apptainer works
[2025-07-24 09:42:50] Set ATHENA_PROC_NUMBER=12
[2025-07-24 09:42:50] Set ATHENA_CORE_NUMBER=12
[2025-07-24 09:42:50] Starting ATLAS job with PandaID=6741823783
[2025-07-24 09:42:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31422/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 12:28:52]  *** The last 200 lines of the pilot log: ***
[2025-07-24 12:28:52] 2025-07-24 12:28:17,432 | INFO     | current chi2=1.8528061015755803 (change=0.12833158922311155 %)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,432 | INFO     | right removable region: 156
[2025-07-24 12:28:52] 2025-07-24 12:28:17,432 | INFO     | sum of square deviations: 1199940638.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,433 | INFO     | sum of deviations: 18611107808.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,433 | INFO     | mean x: 1753355282.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,434 | INFO     | mean y: 2727080.8598726112
[2025-07-24 12:28:52] 2025-07-24 12:28:17,434 | INFO     | -- intersect: -27191855005.648514
[2025-07-24 12:28:52] 2025-07-24 12:28:17,434 | INFO     | intersect: -27191855005.648514
[2025-07-24 12:28:52] 2025-07-24 12:28:17,434 | INFO     | chi2: 0.1749935901870261
[2025-07-24 12:28:52] 2025-07-24 12:28:17,434 | INFO     | current chi2=0.1749935901870261 (change=90.56733362530049 %)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,435 | INFO     | sum of square deviations: 1088905998.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,436 | INFO     | sum of deviations: 6217054516.499999
[2025-07-24 12:28:52] 2025-07-24 12:28:17,436 | INFO     | mean x: 1753355434.5
[2025-07-24 12:28:52] 2025-07-24 12:28:17,436 | INFO     | mean y: 2744061.8092105263
[2025-07-24 12:28:52] 2025-07-24 12:28:17,436 | INFO     | -- intersect: -10007951391.342333
[2025-07-24 12:28:52] 2025-07-24 12:28:17,436 | INFO     | intersect: -10007951391.342333
[2025-07-24 12:28:52] 2025-07-24 12:28:17,436 | INFO     | chi2: 0.0075562491851585015
[2025-07-24 12:28:52] 2025-07-24 12:28:17,436 | INFO     | current chi2=0.0075562491851585015 (change=95.68198516466649 %)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,437 | INFO     | sum of square deviations: 984941258.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,438 | INFO     | sum of deviations: 3672628037.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,438 | INFO     | mean x: 1753355587.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,438 | INFO     | mean y: 2747773.6666666665
[2025-07-24 12:28:52] 2025-07-24 12:28:17,438 | INFO     | -- intersect: -6535127287.758359
[2025-07-24 12:28:52] 2025-07-24 12:28:17,438 | INFO     | intersect: -6535127287.758359
[2025-07-24 12:28:52] 2025-07-24 12:28:17,438 | INFO     | chi2: 0.0013755396937725989
[2025-07-24 12:28:52] 2025-07-24 12:28:17,439 | INFO     | current chi2=0.0013755396937725989 (change=81.79599878105734 %)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,439 | INFO     | sum of square deviations: 887813855.5
[2025-07-24 12:28:52] 2025-07-24 12:28:17,440 | INFO     | sum of deviations: 2626291315.9999995
[2025-07-24 12:28:52] 2025-07-24 12:28:17,440 | INFO     | mean x: 1753355739.5
[2025-07-24 12:28:52] 2025-07-24 12:28:17,440 | INFO     | mean y: 2749411.084507042
[2025-07-24 12:28:52] 2025-07-24 12:28:17,440 | INFO     | -- intersect: -5183949269.028182
[2025-07-24 12:28:52] 2025-07-24 12:28:17,440 | INFO     | intersect: -5183949269.028182
[2025-07-24 12:28:52] 2025-07-24 12:28:17,441 | INFO     | chi2: 0.0006150529949180876
[2025-07-24 12:28:52] 2025-07-24 12:28:17,441 | INFO     | current chi2=0.0006150529949180876 (change=55.28642337966826 %)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,441 | INFO     | sum of square deviations: 797291228.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,442 | INFO     | sum of deviations: 2067261147.0000005
[2025-07-24 12:28:52] 2025-07-24 12:28:17,442 | INFO     | mean x: 1753355892.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,442 | INFO     | mean y: 2750352.299270073
[2025-07-24 12:28:52] 2025-07-24 12:28:17,442 | INFO     | -- intersect: -4543448558.589951
[2025-07-24 12:28:52] 2025-07-24 12:28:17,442 | INFO     | intersect: -4543448558.589951
[2025-07-24 12:28:52] 2025-07-24 12:28:17,443 | INFO     | chi2: 0.0004746769752990123
[2025-07-24 12:28:52] 2025-07-24 12:28:17,443 | INFO     | current chi2=0.0004746769752990123 (change=22.823402337512483 %)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,443 | INFO     | left removable region: 50
[2025-07-24 12:28:52] 2025-07-24 12:28:17,443 | INFO     | sum of square deviations: 369281342.5
[2025-07-24 12:28:52] 2025-07-24 12:28:17,444 | INFO     | sum of deviations: 401467230.0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,444 | INFO     | mean x: 1753356471.5
[2025-07-24 12:28:52] 2025-07-24 12:28:17,444 | INFO     | mean y: 2753565.754716981
[2025-07-24 12:28:52] 2025-07-24 12:28:17,444 | INFO     | -- intersect: -1903422254.1506143
[2025-07-24 12:28:52] 2025-07-24 12:28:17,444 | INFO     | intersect: -1903422254.1506143
[2025-07-24 12:28:52] 2025-07-24 12:28:17,444 | INFO     | chi2: 0.00010386533192457327
[2025-07-24 12:28:52] 2025-07-24 12:28:17,445 | INFO     | -- intersect: -1903422254.1506143
[2025-07-24 12:28:52] 2025-07-24 12:28:17,445 | INFO     | current memory leak: 1.09 B/s (using 106 data points, chi2=0.00)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,445 | INFO     | could have reported an average CPU frequency of 2375 MHz (9 samples)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,445 | INFO     | ..............................
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | . Timing measurements:
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | . get job = 0 s
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | . initial setup = 2 s
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | . payload setup = 9 s
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | . stage-in = 0 s
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | . payload execution = 9873 s
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | . stage-out = 1 s
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | . log creation = 0 s
[2025-07-24 12:28:52] 2025-07-24 12:28:17,446 | INFO     | ..............................
[2025-07-24 12:28:52] 2025-07-24 12:28:17,560 | INFO     | 
[2025-07-24 12:28:52] 2025-07-24 12:28:17,560 | INFO     | job summary report
[2025-07-24 12:28:52] 2025-07-24 12:28:17,560 | INFO     | --------------------------------------------------
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | PanDA job id: 6741823783
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | task id: 45697532
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | errors: (none)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | pilot state: finished 
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | transexitcode: 0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | exeerrorcode: 0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | exeerrordiag: 
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | exitcode: 0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,561 | INFO     | exitmsg: OK
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | cpuconsumptiontime: 69290 s
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | nevents: 400
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | neventsw: 0
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | pid: 652891
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | pgrp: 652891
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | corecount: 12
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | event service: False
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | sizes: {0: 2396706, 1: 2397585, 7: 2397847, 12: 2397875, 9883: 2426481, 9884: 2426480, 9886: 2435708, 9889: 2435764, 9895: 2436022}
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | --------------------------------------------------
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | 
[2025-07-24 12:28:52] 2025-07-24 12:28:17,562 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31422/slots/1
[2025-07-24 12:28:52] 2025-07-24 12:28:17,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,590 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,590 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,590 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,591 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | job 6741823783 has completed (purged errors)
[2025-07-24 12:28:52] 2025-07-24 12:28:17,592 | INFO     | overall cleanup function is called
[2025-07-24 12:28:52] 2025-07-24 12:28:18,603 | INFO     | --- collectZombieJob: --- 10, [652891]
[2025-07-24 12:28:52] 2025-07-24 12:28:18,603 | INFO     | zombie collector waiting for pid 652891
[2025-07-24 12:28:52] 2025-07-24 12:28:18,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 12:28:52] 2025-07-24 12:28:18,603 | INFO     | collected zombie processes
[2025-07-24 12:28:52] 2025-07-24 12:28:18,603 | INFO     | will attempt to kill all subprocesses of pid=652891
[2025-07-24 12:28:52] 2025-07-24 12:28:18,952 | INFO     | PID=635342 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 12:28:52] 2025-07-24 12:28:18,952 | INFO     | .. there are 20 such processes running
[2025-07-24 12:28:52] 2025-07-24 12:28:19,303 | INFO     | process IDs to be killed: [652891] (in reverse order)
[2025-07-24 12:28:52] 2025-07-24 12:28:19,537 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 12:28:52] 2025-07-24 12:28:19,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 12:28:52] 2025-07-24 12:28:19,555 | INFO     | did not find any defunct processes belonging to 652891
[2025-07-24 12:28:52] 2025-07-24 12:28:19,572 | INFO     | did not find any defunct processes belonging to 652891
[2025-07-24 12:28:52] 2025-07-24 12:28:19,572 | INFO     | ready for new job
[2025-07-24 12:28:52] 2025-07-24 12:28:19,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 12:28:52] 2025-07-24 12:28:19,574 | INFO     | ***************************************
[2025-07-24 12:28:52] 2025-07-24 12:28:19,574 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 12:28:52] 2025-07-24 12:28:19,574 | INFO     | ***************************************
[2025-07-24 12:28:52] 2025-07-24 12:28:19,574 | INFO     | 
[2025-07-24 12:28:52] 2025-07-24 12:28:19,604 | INFO     | architecture information:
[2025-07-24 12:28:52] 2025-07-24 12:28:19,605 | INFO     | executing command: cat /etc/os-release
[2025-07-24 12:28:52] 2025-07-24 12:28:19,625 | INFO     | cat /etc/os-release:
[2025-07-24 12:28:52] NAME="CentOS Linux"
[2025-07-24 12:28:52] VERSION="7 (Core)"
[2025-07-24 12:28:52] ID="centos"
[2025-07-24 12:28:52] ID_LIKE="rhel fedora"
[2025-07-24 12:28:52] VERSION_ID="7"
[2025-07-24 12:28:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 12:28:52] ANSI_COLOR="0;31"
[2025-07-24 12:28:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 12:28:52] HOME_URL="https://www.centos.org/"
[2025-07-24 12:28:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 12:28:52] 
[2025-07-24 12:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 12:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 12:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 12:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 12:28:52] 
[2025-07-24 12:28:52] 2025-07-24 12:28:19,626 | INFO     | ***************************************
[2025-07-24 12:28:52] 2025-07-24 12:28:20,129 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31422/slots/1
[2025-07-24 12:28:52] 2025-07-24 12:28:20,154 | INFO     | sufficient remaining disk space (225831813120 B)
[2025-07-24 12:28:52] 2025-07-24 12:28:20,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 12:28:52] 2025-07-24 12:28:20,155 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 12:28:52] 2025-07-24 12:28:20,155 | INFO     | update_server=False
[2025-07-24 12:28:52] 2025-07-24 12:28:20,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 12:28:52] 2025-07-24 12:28:20,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 12:28:52] 2025-07-24 12:28:20,175 | INFO     | aborting loop
[2025-07-24 12:28:52] 2025-07-24 12:28:20,487 | INFO     | all payload control threads have been joined
[2025-07-24 12:28:52] 2025-07-24 12:28:20,991 | INFO     | all job control threads have been joined
[2025-07-24 12:28:52] 2025-07-24 12:28:21,159 | INFO     | [job] retrieve thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,181 | INFO     | [job] job monitor thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,190 | INFO     | all data control threads have been joined
[2025-07-24 12:28:52] 2025-07-24 12:28:21,193 | INFO     | [data] copytool_in thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,477 | INFO     | [payload] validate_post thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,495 | INFO     | [payload] control thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,519 | INFO     | [job] validate thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 12:28:52] 2025-07-24 12:28:21,627 | INFO     | [payload] failed_post thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,955 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 12:28:52] 2025-07-24 12:28:21,995 | INFO     | [job] control thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:21,999 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:22,195 | INFO     | [data] control thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:22,431 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:22,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 12:28:52] 2025-07-24 12:28:23,563 | INFO     | [data] copytool_out thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:23,571 | INFO     | [job] queue monitor thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:25,999 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:30,335 | INFO     | job.realtimelogging is not enabled
[2025-07-24 12:28:52] 2025-07-24 12:28:31,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 12:28:52] 2025-07-24 12:28:32,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140689888642880)>', '<ExcThread(monitor, started 140689220294400)>']
[2025-07-24 12:28:52] 2025-07-24 12:28:37,535 | INFO     | all workflow threads have been joined
[2025-07-24 12:28:52] 2025-07-24 12:28:37,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 12:28:52] 2025-07-24 12:28:37,535 | INFO     | traces error code: 0
[2025-07-24 12:28:52] 2025-07-24 12:28:37,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 12:28:52] 2025-07-24 12:28:51,648 | INFO     | PID=635342 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 12:28:52] 2025-07-24 12:28:51,648 | INFO     | .. there are 20 such processes running
[2025-07-24 12:28:52] 2025-07-24 12:28:51,649 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 12:28:52] 2025-07-24 12:28:51,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 12:28:52] 2025-07-24 12:28:51,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 12:28:52] 2025-07-24 12:28:51,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 12:28:52] 2025-07-24 12:28:51,649 | INFO     | [monitor] control thread has ended
[2025-07-24 12:28:52] 2025-07-24 12:28:51,791 [wrapper] ==== pilot stdout END ====
[2025-07-24 12:28:52] 2025-07-24 12:28:51,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 12:28:52] 2025-07-24 12:28:51,798 [wrapper] pilotpid: 635342
[2025-07-24 12:28:52] 2025-07-24 12:28:51,802 [wrapper] Pilot exit status: 0
[2025-07-24 12:28:52] 2025-07-24 12:28:51,816 [wrapper] pandaids: 6741823783
[2025-07-24 12:28:52] 2025-07-24 12:28:51,940 [wrapper] cleanup supervisor_pilot 1286837 635343
[2025-07-24 12:28:52] 2025-07-24 12:28:51,944 [wrapper] Test setup, not cleaning
[2025-07-24 12:28:52] 2025-07-24 12:28:51,948 [wrapper] apfmon messages muted
[2025-07-24 12:28:52] 2025-07-24 12:28:51,951 [wrapper] ==== wrapper stdout END ====
[2025-07-24 12:28:52] 2025-07-24 12:28:51,954 [wrapper] ==== wrapper stderr END ====
[2025-07-24 12:28:52]  *** Error codes and diagnostics ***
[2025-07-24 12:28:52]     "exeErrorCode": 0,
[2025-07-24 12:28:52]     "exeErrorDiag": "",
[2025-07-24 12:28:52]     "pilotErrorCode": 0,
[2025-07-24 12:28:52]     "pilotErrorDiag": "",
[2025-07-24 12:28:52]  *** Listing of results directory ***
[2025-07-24 12:28:52] total 606292
[2025-07-24 12:28:52] -rw-r--r-- 1 boinc boinc    530466 Jul 21 23:18 pilot3.tar.gz
[2025-07-24 12:28:52] -rwx------ 1 boinc boinc     36292 Jul 21 23:53 runpilot2-wrapper.sh
[2025-07-24 12:28:52] -rw-r--r-- 1 boinc boinc      5112 Jul 21 23:53 queuedata.json
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc       100 Jul 24 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 12:28:52] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 09:42 run_atlas
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc       105 Jul 24 09:42 job.xml
[2025-07-24 12:28:52] -rw-r--r-- 2 boinc boinc     15095 Jul 24 09:42 start_atlas.sh
[2025-07-24 12:28:52] drwxrwx--x 2 boinc boinc      4096 Jul 24 09:42 shared
[2025-07-24 12:28:52] -rw-r--r-- 2 boinc boinc    542900 Jul 24 09:42 input.tar.gz
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc      6569 Jul 24 09:42 init_data.xml
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc         0 Jul 24 09:42 boinc_setup_complete
[2025-07-24 12:28:52] -rw-r--r-- 2 boinc boinc 329150276 Jul 24 09:42 EVNT.45697530._000137.pool.root.1
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc         0 Jul 24 09:42 boinc_lockfile
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc      2612 Jul 24 09:42 pandaJob.out
[2025-07-24 12:28:52] -rw------- 1 boinc boinc    978947 Jul 24 09:43 agis_schedconf.cvmfs.json
[2025-07-24 12:28:52] -rw------- 1 boinc boinc   1593041 Jul 24 09:43 agis_ddmendpoints.agis.ALL.json
[2025-07-24 12:28:52] drwx------ 4 boinc boinc      4096 Jul 24 09:43 pilot3
[2025-07-24 12:28:52] -rw------- 1 boinc boinc 285214331 Jul 24 12:27 HITS.45697532._003423.pool.root.1
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc       530 Jul 24 12:27 boinc_task_state.xml
[2025-07-24 12:28:52] -rw------- 1 boinc boinc      1024 Jul 24 12:28 memory_monitor_summary.json
[2025-07-24 12:28:52] -rw------- 1 boinc boinc        95 Jul 24 12:28 pilot_heartbeat.json
[2025-07-24 12:28:52] -rw------- 1 boinc boinc    424435 Jul 24 12:28 log.45697532._003423.job.log.tgz.1
[2025-07-24 12:28:52] -rw------- 1 boinc boinc      7730 Jul 24 12:28 heartbeat.json
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc        27 Jul 24 12:28 wrapper_checkpoint.txt
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc      8192 Jul 24 12:28 boinc_mmap_file
[2025-07-24 12:28:52] -rw------- 1 boinc boinc       822 Jul 24 12:28 pilotlog.txt
[2025-07-24 12:28:52] -rw------- 1 boinc boinc    876405 Jul 24 12:28 log.45697532._003423.job.log.1
[2025-07-24 12:28:52] -rw------- 1 boinc boinc       357 Jul 24 12:28 output.list
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc       620 Jul 24 12:28 runtime_log
[2025-07-24 12:28:52] -rw------- 1 boinc boinc   1320960 Jul 24 12:28 result.tar.gz
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc      8964 Jul 24 12:28 runtime_log.err
[2025-07-24 12:28:52] -rw------- 1 boinc boinc       654 Jul 24 12:28 UYhMDmJVFy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4NHLDmmQvLnn.diag
[2025-07-24 12:28:52] -rw-rw-r-- 1 boinc boinc     20878 Jul 24 12:28 stderr.txt
[2025-07-24 12:28:52] HITS file was successfully produced:
[2025-07-24 12:28:52] -rw------- 1 boinc boinc 285214331 Jul 24 12:27 shared/HITS.pool.root.1
[2025-07-24 12:28:52]  *** Contents of shared directory: ***
[2025-07-24 12:28:52] total 601816
[2025-07-24 12:28:52] -rw-r--r-- 2 boinc boinc     15095 Jul 24 09:42 start_atlas.sh
[2025-07-24 12:28:52] -rw-r--r-- 2 boinc boinc    542900 Jul 24 09:42 input.tar.gz
[2025-07-24 12:28:52] -rw-r--r-- 2 boinc boinc 329150276 Jul 24 09:42 ATLAS.root_0
[2025-07-24 12:28:52] -rw------- 1 boinc boinc 285214331 Jul 24 12:27 HITS.pool.root.1
[2025-07-24 12:28:52] -rw------- 1 boinc boinc   1320960 Jul 24 12:28 result.tar.gz
12:28:53 (628077): run_atlas exited; CPU time 69788.848542
12:28:53 (628077): called boinc_finish(0)

</stderr_txt>
]]>

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