Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:42:11 (155310): wrapper (7.7.26015): starting
13:42:11 (155310): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 13:42:11] Arguments: --nthreads 12
[2025-07-23 13:42:11] Threads: 12
[2025-07-23 13:42:11] Checking for CVMFS
[2025-07-23 13:42:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 13:42:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 13:42:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 13:42:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 13:42:14] 2.13.0.0 1164766 1975 74072 148659 3 188 3275609 4096000 16149 130560 0 20596379 99.999 73621 206 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-23 13:42:14] CVMFS is ok
[2025-07-23 13:42:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 13:42:14] Checking for apptainer binary...
[2025-07-23 13:42:14] apptainer is not installed, using version from CVMFS
[2025-07-23 13:42:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 13:42:28] epyc7v12
[2025-07-23 13:42:28] apptainer works
[2025-07-23 13:42:28] Set ATHENA_PROC_NUMBER=12
[2025-07-23 13:42:28] Set ATHENA_CORE_NUMBER=12
[2025-07-23 13:42:28] Starting ATLAS job with PandaID=6741801418
[2025-07-23 13:42:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31422/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 16:54:05]  *** The last 200 lines of the pilot log: ***
[2025-07-23 16:54:05] 2025-07-23 16:53:27,893 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 16:54:05] 2025-07-23 16:53:27,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 16:54:05] 2025-07-23 16:53:27,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 16:54:05] 2025-07-23 16:53:27,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 16:54:05] 2025-07-23 16:53:27,901 | INFO     | fitting pss+swap vs Time
[2025-07-23 16:54:05] 2025-07-23 16:53:27,901 | INFO     | sum of square deviations: 1605461563.9768791
[2025-07-23 16:54:05] 2025-07-23 16:53:27,902 | INFO     | sum of deviations: 97341728245.76875
[2025-07-23 16:54:05] 2025-07-23 16:53:27,903 | INFO     | mean x: 1753284231.0115607
[2025-07-23 16:54:05] 2025-07-23 16:53:27,904 | INFO     | mean y: 2601891.1156069366
[2025-07-23 16:54:05] 2025-07-23 16:53:27,904 | INFO     | -- intersect: -106301853464.36424
[2025-07-23 16:54:05] 2025-07-23 16:53:27,904 | INFO     | intersect: -106301853464.36424
[2025-07-23 16:54:05] 2025-07-23 16:53:27,904 | INFO     | chi2: 7.278419024860675
[2025-07-23 16:54:05] 2025-07-23 16:53:27,904 | INFO     | sum of square deviations: 1470241033.9761908
[2025-07-23 16:54:05] 2025-07-23 16:53:27,906 | INFO     | sum of deviations: 107186068561.70235
[2025-07-23 16:54:05] 2025-07-23 16:53:27,906 | INFO     | mean x: 1753284078.5119047
[2025-07-23 16:54:05] 2025-07-23 16:53:27,906 | INFO     | mean y: 2612638.398809524
[2025-07-23 16:54:05] 2025-07-23 16:53:27,906 | INFO     | -- intersect: -127818352158.97023
[2025-07-23 16:54:05] 2025-07-23 16:53:27,906 | INFO     | intersect: -127818352158.97023
[2025-07-23 16:54:05] 2025-07-23 16:53:27,906 | INFO     | chi2: 6.467573035151747
[2025-07-23 16:54:05] 2025-07-23 16:53:27,911 | INFO     | current chi2=6.467573035151747 (change=11.140413693404374 %)
[2025-07-23 16:54:05] 2025-07-23 16:53:27,911 | INFO     | right removable region: 167
[2025-07-23 16:54:05] 2025-07-23 16:53:27,911 | INFO     | sum of square deviations: 1470239813.9761908
[2025-07-23 16:54:05] 2025-07-23 16:53:27,912 | INFO     | sum of deviations: 32367883120.690483
[2025-07-23 16:54:05] 2025-07-23 16:53:27,912 | INFO     | mean x: 1753284383.5119047
[2025-07-23 16:54:05] 2025-07-23 16:53:27,912 | INFO     | mean y: 2675123.154761905
[2025-07-23 16:54:05] 2025-07-23 16:53:27,913 | INFO     | -- intersect: -38596540775.7586
[2025-07-23 16:54:05] 2025-07-23 16:53:27,913 | INFO     | intersect: -38596540775.7586
[2025-07-23 16:54:05] 2025-07-23 16:53:27,913 | INFO     | chi2: 2.251345894244917
[2025-07-23 16:54:05] 2025-07-23 16:53:27,913 | INFO     | current chi2=2.251345894244917 (change=69.06820167188694 %)
[2025-07-23 16:54:05] 2025-07-23 16:53:27,913 | INFO     | sum of square deviations: 1342832163.97546
[2025-07-23 16:54:05] 2025-07-23 16:53:27,919 | INFO     | sum of deviations: 454422909.67484665
[2025-07-23 16:54:05] 2025-07-23 16:53:27,919 | INFO     | mean x: 1753284536.01227
[2025-07-23 16:54:05] 2025-07-23 16:53:27,919 | INFO     | mean y: 2713091.662576687
[2025-07-23 16:54:05] 2025-07-23 16:53:27,919 | INFO     | -- intersect: -590609500.4801964
[2025-07-23 16:54:05] 2025-07-23 16:53:27,919 | INFO     | intersect: -590609500.4801964
[2025-07-23 16:54:05] 2025-07-23 16:53:27,919 | INFO     | chi2: 1.017378529983915
[2025-07-23 16:54:05] 2025-07-23 16:53:27,919 | INFO     | current chi2=1.017378529983915 (change=54.810207859013346 %)
[2025-07-23 16:54:05] 2025-07-23 16:53:27,920 | INFO     | sum of square deviations: 1223006051.474682
[2025-07-23 16:54:05] 2025-07-23 16:53:27,921 | INFO     | sum of deviations: -7894867674.86076
[2025-07-23 16:54:05] 2025-07-23 16:53:27,921 | INFO     | mean x: 1753284688.512658
[2025-07-23 16:54:05] 2025-07-23 16:53:27,921 | INFO     | mean y: 2723618.430379747
[2025-07-23 16:54:05] 2025-07-23 16:53:27,921 | INFO     | -- intersect: 11320697552.800114
[2025-07-23 16:54:05] 2025-07-23 16:53:27,921 | INFO     | intersect: 11320697552.800114
[2025-07-23 16:54:05] 2025-07-23 16:53:27,921 | INFO     | chi2: 0.9151504748703118
[2025-07-23 16:54:05] 2025-07-23 16:53:27,922 | INFO     | current chi2=0.9151504748703118 (change=10.048182864171467 %)
[2025-07-23 16:54:05] 2025-07-23 16:53:27,922 | INFO     | left removable region: 30
[2025-07-23 16:54:05] 2025-07-23 16:53:27,922 | INFO     | sum of square deviations: 797279761.970806
[2025-07-23 16:54:05] 2025-07-23 16:53:27,927 | INFO     | sum of deviations: 2335825325.4306574
[2025-07-23 16:54:05] 2025-07-23 16:53:27,927 | INFO     | mean x: 1753284963.0145986
[2025-07-23 16:54:05] 2025-07-23 16:53:27,927 | INFO     | mean y: 2741714.284671533
[2025-07-23 16:54:05] 2025-07-23 16:53:27,927 | INFO     | -- intersect: -5133933784.893762
[2025-07-23 16:54:05] 2025-07-23 16:53:27,927 | INFO     | intersect: -5133933784.893762
[2025-07-23 16:54:05] 2025-07-23 16:53:27,928 | INFO     | chi2: 0.00017976825747651265
[2025-07-23 16:54:05] 2025-07-23 16:53:27,928 | INFO     | -- intersect: -5133933784.893762
[2025-07-23 16:54:05] 2025-07-23 16:53:27,928 | INFO     | current memory leak: 2.93 B/s (using 137 data points, chi2=0.00)
[2025-07-23 16:54:05] 2025-07-23 16:53:27,928 | INFO     | could have reported an average CPU frequency of 2385 MHz (9 samples)
[2025-07-23 16:54:05] 2025-07-23 16:53:27,929 | INFO     | ..............................
[2025-07-23 16:54:05] 2025-07-23 16:53:27,929 | INFO     | . Timing measurements:
[2025-07-23 16:54:05] 2025-07-23 16:53:27,929 | INFO     | . get job = 0 s
[2025-07-23 16:54:05] 2025-07-23 16:53:27,929 | INFO     | . initial setup = 8 s
[2025-07-23 16:54:05] 2025-07-23 16:53:27,929 | INFO     | . payload setup = 175 s
[2025-07-23 16:54:05] 2025-07-23 16:53:27,929 | INFO     | . stage-in = 0 s
[2025-07-23 16:54:05] 2025-07-23 16:53:27,929 | INFO     | . payload execution = 10647 s
[2025-07-23 16:54:05] 2025-07-23 16:53:27,939 | INFO     | . stage-out = 3 s
[2025-07-23 16:54:05] 2025-07-23 16:53:27,939 | INFO     | . log creation = 0 s
[2025-07-23 16:54:05] 2025-07-23 16:53:27,939 | INFO     | ..............................
[2025-07-23 16:54:05] 2025-07-23 16:53:28,136 | INFO     | 
[2025-07-23 16:54:05] 2025-07-23 16:53:28,136 | INFO     | job summary report
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | --------------------------------------------------
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | PanDA job id: 6741801418
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | task id: 45697532
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | errors: (none)
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | pilot state: finished 
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | transexitcode: 0
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | exeerrorcode: 0
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | exeerrordiag: 
[2025-07-23 16:54:05] 2025-07-23 16:53:28,137 | INFO     | exitcode: 0
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | exitmsg: OK
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | cpuconsumptiontime: 65802 s
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | nevents: 400
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | neventsw: 0
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | pid: 188168
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | pgrp: 188168
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | corecount: 12
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | event service: False
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | sizes: {0: 2396706, 1: 2397414, 2: 2397613, 13: 2397613, 24: 2397669, 35: 2397697, 46: 2397853, 56: 2397881, 67: 2397909, 78: 2397937, 89: 2397993, 99: 2398301, 11
[2025-07-23 16:54:05] 2025-07-23 16:53:28,138 | INFO     | --------------------------------------------------
[2025-07-23 16:54:05] 2025-07-23 16:53:28,139 | INFO     | 
[2025-07-23 16:54:05] 2025-07-23 16:53:28,139 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31422/slots/0
[2025-07-23 16:54:05] 2025-07-23 16:53:28,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,432 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 16:54:05] 2025-07-23 16:53:28,434 | INFO     | job 6741801418 has completed (purged errors)
[2025-07-23 16:54:05] 2025-07-23 16:53:28,435 | INFO     | overall cleanup function is called
[2025-07-23 16:54:05] 2025-07-23 16:53:29,443 | INFO     | --- collectZombieJob: --- 10, [188168]
[2025-07-23 16:54:05] 2025-07-23 16:53:29,443 | INFO     | zombie collector waiting for pid 188168
[2025-07-23 16:54:05] 2025-07-23 16:53:29,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 16:54:05] 2025-07-23 16:53:29,443 | INFO     | collected zombie processes
[2025-07-23 16:54:05] 2025-07-23 16:53:29,443 | INFO     | will attempt to kill all subprocesses of pid=188168
[2025-07-23 16:54:05] 2025-07-23 16:53:30,535 | INFO     | process IDs to be killed: [188168] (in reverse order)
[2025-07-23 16:54:05] 2025-07-23 16:53:35,493 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 16:54:05] 2025-07-23 16:53:35,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 16:54:05] 2025-07-23 16:53:35,512 | INFO     | did not find any defunct processes belonging to 188168
[2025-07-23 16:54:05] 2025-07-23 16:53:35,529 | INFO     | did not find any defunct processes belonging to 188168
[2025-07-23 16:54:05] 2025-07-23 16:53:35,530 | INFO     | ready for new job
[2025-07-23 16:54:05] 2025-07-23 16:53:35,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 16:54:05] 2025-07-23 16:53:35,532 | INFO     | ***************************************
[2025-07-23 16:54:05] 2025-07-23 16:53:35,532 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 16:54:05] 2025-07-23 16:53:35,532 | INFO     | ***************************************
[2025-07-23 16:54:05] 2025-07-23 16:53:35,532 | INFO     | 
[2025-07-23 16:54:05] 2025-07-23 16:53:35,542 | INFO     | architecture information:
[2025-07-23 16:54:05] 2025-07-23 16:53:35,543 | INFO     | executing command: cat /etc/os-release
[2025-07-23 16:54:05] 2025-07-23 16:53:35,566 | INFO     | cat /etc/os-release:
[2025-07-23 16:54:05] NAME="CentOS Linux"
[2025-07-23 16:54:05] VERSION="7 (Core)"
[2025-07-23 16:54:05] ID="centos"
[2025-07-23 16:54:05] ID_LIKE="rhel fedora"
[2025-07-23 16:54:05] VERSION_ID="7"
[2025-07-23 16:54:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 16:54:05] ANSI_COLOR="0;31"
[2025-07-23 16:54:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 16:54:05] HOME_URL="https://www.centos.org/"
[2025-07-23 16:54:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 16:54:05] 
[2025-07-23 16:54:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 16:54:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 16:54:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 16:54:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 16:54:05] 
[2025-07-23 16:54:05] 2025-07-23 16:53:35,566 | INFO     | ***************************************
[2025-07-23 16:54:05] 2025-07-23 16:53:36,071 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31422/slots/0
[2025-07-23 16:54:05] 2025-07-23 16:53:36,444 | INFO     | sufficient remaining disk space (203109171200 B)
[2025-07-23 16:54:05] 2025-07-23 16:53:36,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 16:54:05] 2025-07-23 16:53:36,445 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 16:54:05] 2025-07-23 16:53:36,445 | INFO     | update_server=False
[2025-07-23 16:54:05] 2025-07-23 16:53:36,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 16:54:05] 2025-07-23 16:53:36,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:54:05] 2025-07-23 16:53:36,747 | INFO     | aborting loop
[2025-07-23 16:54:05] 2025-07-23 16:53:37,081 | INFO     | all job control threads have been joined
[2025-07-23 16:54:05] 2025-07-23 16:53:37,105 | INFO     | all payload control threads have been joined
[2025-07-23 16:54:05] 2025-07-23 16:53:37,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 16:54:05] 2025-07-23 16:53:37,281 | INFO     | all data control threads have been joined
[2025-07-23 16:54:05] 2025-07-23 16:53:37,447 | INFO     | [job] retrieve thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:37,755 | INFO     | [job] job monitor thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:37,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 16:54:05] 2025-07-23 16:53:37,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:37,855 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:37,999 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:38,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 16:54:05] 2025-07-23 16:53:38,083 | INFO     | [job] control thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:38,111 | INFO     | [payload] control thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:38,179 | INFO     | [job] queue monitor thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:38,223 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:38,291 | INFO     | [data] control thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:38,388 | INFO     | [payload] failed_post thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:38,403 | INFO     | [job] validate thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:38,735 | INFO     | [data] copytool_in thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:39,043 | INFO     | [payload] validate_post thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:39,795 | INFO     | [data] copytool_out thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:42,055 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 16:54:05] 2025-07-23 16:53:43,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572680664896)>', '<ExcThread(monitor, started 140572232759040)>']
[2025-07-23 16:54:05] 2025-07-23 16:53:48,151 | INFO     | all workflow threads have been joined
[2025-07-23 16:54:05] 2025-07-23 16:53:48,151 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 16:54:05] 2025-07-23 16:53:48,151 | INFO     | traces error code: 0
[2025-07-23 16:54:05] 2025-07-23 16:53:48,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 16:54:05] 2025-07-23 16:54:01,843 | INFO     | PID=163757 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 16:54:05] 2025-07-23 16:54:01,844 | INFO     | .. there are 20 such processes running
[2025-07-23 16:54:05] 2025-07-23 16:54:01,844 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 16:54:05] 2025-07-23 16:54:01,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 16:54:05] 2025-07-23 16:54:01,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 16:54:05] 2025-07-23 16:54:01,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 16:54:05] 2025-07-23 16:54:01,844 | INFO     | [monitor] control thread has ended
[2025-07-23 16:54:05] 2025-07-23 16:54:02,235 [wrapper] ==== pilot stdout END ====
[2025-07-23 16:54:05] 2025-07-23 16:54:02,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 16:54:05] 2025-07-23 16:54:02,447 [wrapper] pilotpid: 163757
[2025-07-23 16:54:05] 2025-07-23 16:54:02,571 [wrapper] Pilot exit status: 0
[2025-07-23 16:54:05] 2025-07-23 16:54:02,963 [wrapper] pandaids: 6741801418
[2025-07-23 16:54:05] 2025-07-23 16:54:03,575 [wrapper] cleanup supervisor_pilot  793103 163758
[2025-07-23 16:54:05] 2025-07-23 16:54:03,635 [wrapper] Test setup, not cleaning
[2025-07-23 16:54:05] 2025-07-23 16:54:03,735 [wrapper] apfmon messages muted
[2025-07-23 16:54:05] 2025-07-23 16:54:03,783 [wrapper] ==== wrapper stdout END ====
[2025-07-23 16:54:05] 2025-07-23 16:54:03,855 [wrapper] ==== wrapper stderr END ====
[2025-07-23 16:54:05]  *** Error codes and diagnostics ***
[2025-07-23 16:54:05]     "exeErrorCode": 0,
[2025-07-23 16:54:05]     "exeErrorDiag": "",
[2025-07-23 16:54:05]     "pilotErrorCode": 0,
[2025-07-23 16:54:05]     "pilotErrorDiag": "",
[2025-07-23 16:54:05]  *** Listing of results directory ***
[2025-07-23 16:54:05] total 603524
[2025-07-23 16:54:05] -rw-r--r-- 1 boinc boinc    530466 Jul 21 23:18 pilot3.tar.gz
[2025-07-23 16:54:05] -rw-r--r-- 1 boinc boinc      5112 Jul 21 23:48 queuedata.json
[2025-07-23 16:54:05] -rwx------ 1 boinc boinc     36292 Jul 21 23:49 runpilot2-wrapper.sh
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc       100 Jul 23 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 16:54:05] -rwxr-xr-x 1 boinc boinc      7986 Jul 23 13:42 run_atlas
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc       105 Jul 23 13:42 job.xml
[2025-07-23 16:54:05] -rw-r--r-- 2 boinc boinc 331963912 Jul 23 13:42 EVNT.45697530._000129.pool.root.1
[2025-07-23 16:54:05] -rw-r--r-- 2 boinc boinc     15095 Jul 23 13:42 start_atlas.sh
[2025-07-23 16:54:05] drwxrwx--x 2 boinc boinc      4096 Jul 23 13:42 shared
[2025-07-23 16:54:05] -rw-r--r-- 2 boinc boinc    542902 Jul 23 13:42 input.tar.gz
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc      6569 Jul 23 13:42 init_data.xml
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc         0 Jul 23 13:42 boinc_setup_complete
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc         0 Jul 23 13:42 boinc_lockfile
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc      2612 Jul 23 13:42 pandaJob.out
[2025-07-23 16:54:05] -rw------- 1 boinc boinc    978503 Jul 23 13:46 agis_schedconf.cvmfs.json
[2025-07-23 16:54:05] drwx------ 4 boinc boinc      4096 Jul 23 13:46 pilot3
[2025-07-23 16:54:05] -rw------- 1 boinc boinc 279459965 Jul 23 16:50 HITS.45697532._003207.pool.root.1
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc       531 Jul 23 16:50 boinc_task_state.xml
[2025-07-23 16:54:05] -rw------- 1 boinc boinc      1024 Jul 23 16:51 memory_monitor_summary.json
[2025-07-23 16:54:05] -rw------- 1 boinc boinc   1593041 Jul 23 16:51 agis_ddmendpoints.agis.ALL.json
[2025-07-23 16:54:05] -rw------- 1 boinc boinc    409786 Jul 23 16:51 log.45697532._003207.job.log.tgz.1
[2025-07-23 16:54:05] -rw------- 1 boinc boinc        95 Jul 23 16:53 pilot_heartbeat.json
[2025-07-23 16:54:05] -rw------- 1 boinc boinc      7738 Jul 23 16:53 heartbeat.json
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc      8192 Jul 23 16:53 boinc_mmap_file
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc        28 Jul 23 16:53 wrapper_checkpoint.txt
[2025-07-23 16:54:05] -rw------- 1 boinc boinc       822 Jul 23 16:54 pilotlog.txt
[2025-07-23 16:54:05] -rw------- 1 boinc boinc    947807 Jul 23 16:54 log.45697532._003207.job.log.1
[2025-07-23 16:54:05] -rw------- 1 boinc boinc       357 Jul 23 16:54 output.list
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc       620 Jul 23 16:54 runtime_log
[2025-07-23 16:54:05] -rw------- 1 boinc boinc   1372160 Jul 23 16:54 result.tar.gz
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc      8965 Jul 23 16:54 runtime_log.err
[2025-07-23 16:54:05] -rw------- 1 boinc boinc       656 Jul 23 16:54 RgPMDmORFy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbMHLDmF7nFSo.diag
[2025-07-23 16:54:05] -rw-rw-r-- 1 boinc boinc     20797 Jul 23 16:54 stderr.txt
[2025-07-23 16:54:05] HITS file was successfully produced:
[2025-07-23 16:54:05] -rw------- 1 boinc boinc 279459965 Jul 23 16:50 shared/HITS.pool.root.1
[2025-07-23 16:54:05]  *** Contents of shared directory: ***
[2025-07-23 16:54:05] total 598992
[2025-07-23 16:54:05] -rw-r--r-- 2 boinc boinc 331963912 Jul 23 13:42 ATLAS.root_0
[2025-07-23 16:54:05] -rw-r--r-- 2 boinc boinc     15095 Jul 23 13:42 start_atlas.sh
[2025-07-23 16:54:05] -rw-r--r-- 2 boinc boinc    542902 Jul 23 13:42 input.tar.gz
[2025-07-23 16:54:05] -rw------- 1 boinc boinc 279459965 Jul 23 16:50 HITS.pool.root.1
[2025-07-23 16:54:05] -rw------- 1 boinc boinc   1372160 Jul 23 16:54 result.tar.gz
16:54:06 (155310): run_atlas exited; CPU time 66352.484800
16:54:06 (155310): called boinc_finish(0)

</stderr_txt>
]]>

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