Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:07:10 (606494): wrapper (7.7.26015): starting
22:07:10 (606494): wrapper: running run_atlas (--nthreads 12)
[2025-07-21 22:07:10] Arguments: --nthreads 12
[2025-07-21 22:07:10] Threads: 12
[2025-07-21 22:07:10] Checking for CVMFS
[2025-07-21 22:07:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 22:07:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 22:07:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 22:07:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 22:07:10] 2.11.5.0 6905 29500 355260 148609 1 339 29810272 45568000 18745 130560 0 229354002 99.743 181099727 29270 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-21 22:07:10] CVMFS is ok
[2025-07-21 22:07:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 22:07:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 22:07:10] Further information can be found at the LHC@home message board.
[2025-07-21 22:07:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 22:07:10] Checking for apptainer binary...
[2025-07-21 22:07:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 22:07:10] Running /usr/bin/apptainer --version
[2025-07-21 22:07:10] apptainer version 1.4.1-1.el9
[2025-07-21 22:07:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 22:07:10] wns0079.triumf.lcg
[2025-07-21 22:07:10] apptainer works
[2025-07-21 22:07:10] Set ATHENA_PROC_NUMBER=12
[2025-07-21 22:07:10] Set ATHENA_CORE_NUMBER=12
[2025-07-21 22:07:10] Starting ATLAS job with PandaID=6741946168
[2025-07-21 22:07:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-21 22:10:11]  *** The last 200 lines of the pilot log: ***
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | found no stored workdir sizes
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | INFO     | will not add max space = 0 B to job metrics
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | WARNING  | wrong length of table data, x=[1753160863.0], y=[1157.0] (must be same and length>=4)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | ..............................
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . Timing measurements:
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . get job = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . initial setup = 2 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . payload setup = 4 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . stage-in = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . payload execution = 16 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . stage-out = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . log creation = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | ..............................
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741946168/pilotlog.txt
[2025-07-21 22:10:11] 2025-07-22 05:09:57,254 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-21 22:10:11] - Log from pilotlog.txt -
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | found no stored workdir sizes
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | INFO     | will not add max space = 0 B to job metrics
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | WARNING  | wrong length of table data, x=[1753160863.0], y=[1157.0] (must be same and length>=4)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | ..............................
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . Timing measurements:
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . get job = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . initial setup = 2 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . payload setup = 4 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . stage-in = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . payload execution = 16 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . stage-out = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . log creation = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | ..............................
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741946168/pilotlog.txt
[2025-07-21 22:10:11] 2025-07-22 05:09:57,254 | WARNING  | 
[2025-07-21 22:10:11] [begin log extracts]
[2025-07-21 22:10:11] - Log from pilotlog.txt -
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | WARNING  | found no stored workdir sizes
[2025-07-21 22:10:11] 2025-07-22 05:09:57,241 | INFO     | will not add max space = 0 B to job metrics
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | WARNING  | wrong length of table data, x=[1753160863.0], y=[1157.0] (must be same and length>=4)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | ..............................
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . Timing measurements:
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . get job = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . initial setup = 2 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . payload setup = 4 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . stage-in = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . payload execution = 16 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . stage-out = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,242 | INFO     | . log creation = 0 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | ..............................
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 22:10:11] 2025-07-22 05:09:57,243 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741946168/pilotlog.txt
[2025-07-21 22:10:11] [end log extracts]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,254 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,255 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | 
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | job summary report
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | --------------------------------------------------
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | PanDA job id: 6741946168
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | task id: 45697523
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-21 22:07:50,507 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | pilot state: failed 
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | transexitcode: 65
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | exeerrorcode: 65
[2025-07-21 22:10:11] 2025-07-22 05:09:57,376 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | exitcode: 65
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | cpuconsumptiontime: 16 s
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | nevents: 0
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | neventsw: 0
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | pid: 616453
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | pgrp: 616453
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | corecount: 12
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | event service: False
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | sizes: {0: 2397334, 1: 2397589, 4: 2397851, 11: 2397879, 23: 2421204, 24: 2425628, 143: 2425766}
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | --------------------------------------------------
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | 
[2025-07-21 22:10:11] 2025-07-22 05:09:57,377 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-21 22:10:11] 2025-07-22 05:09:57,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-21 22:10:11] 2025-07-22 05:09:57,394 | INFO     | job 6741946168 has completed (purged errors)
[2025-07-21 22:10:11] 2025-07-22 05:09:57,394 | INFO     | overall cleanup function is called
[2025-07-21 22:10:11] 2025-07-22 05:09:58,400 | INFO     | --- collectZombieJob: --- 10, [616453]
[2025-07-21 22:10:11] 2025-07-22 05:09:58,401 | INFO     | zombie collector waiting for pid 616453
[2025-07-21 22:10:11] 2025-07-22 05:09:58,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-21 22:10:11] 2025-07-22 05:09:58,401 | INFO     | collected zombie processes
[2025-07-21 22:10:11] 2025-07-22 05:09:58,401 | INFO     | will attempt to kill all subprocesses of pid=616453
[2025-07-21 22:10:11] 2025-07-22 05:09:58,649 | INFO     | process IDs to be killed: [616453] (in reverse order)
[2025-07-21 22:10:11] 2025-07-22 05:09:58,728 | WARNING  | found no corresponding commands to process id(s)
[2025-07-21 22:10:11] 2025-07-22 05:09:58,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-21 22:10:11] 2025-07-22 05:09:58,738 | INFO     | did not find any defunct processes belonging to 616453
[2025-07-21 22:10:11] 2025-07-22 05:09:58,747 | INFO     | did not find any defunct processes belonging to 616453
[2025-07-21 22:10:11] 2025-07-22 05:09:58,748 | INFO     | ready for new job
[2025-07-21 22:10:11] 2025-07-22 05:09:58,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-21 22:10:11] 2025-07-22 05:09:58,749 | INFO     | ***************************************
[2025-07-21 22:10:11] 2025-07-22 05:09:58,749 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-21 22:10:11] 2025-07-22 05:09:58,749 | INFO     | ***************************************
[2025-07-21 22:10:11] 2025-07-22 05:09:58,749 | INFO     | 
[2025-07-21 22:10:11] 2025-07-22 05:09:58,751 | INFO     | architecture information:
[2025-07-21 22:10:11] 2025-07-22 05:09:58,751 | INFO     | executing command: cat /etc/os-release
[2025-07-21 22:10:11] 2025-07-22 05:09:58,762 | INFO     | cat /etc/os-release:
[2025-07-21 22:10:11] NAME="CentOS Linux"
[2025-07-21 22:10:11] VERSION="7 (Core)"
[2025-07-21 22:10:11] ID="centos"
[2025-07-21 22:10:11] ID_LIKE="rhel fedora"
[2025-07-21 22:10:11] VERSION_ID="7"
[2025-07-21 22:10:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-21 22:10:11] ANSI_COLOR="0;31"
[2025-07-21 22:10:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-21 22:10:11] HOME_URL="https://www.centos.org/"
[2025-07-21 22:10:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-21 22:10:11] 
[2025-07-21 22:10:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-21 22:10:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-21 22:10:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-21 22:10:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-21 22:10:11] 
[2025-07-21 22:10:11] 2025-07-22 05:09:58,762 | INFO     | ***************************************
[2025-07-21 22:10:11] 2025-07-22 05:09:59,264 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-21 22:10:11] 2025-07-22 05:09:59,275 | INFO     | sufficient remaining disk space (1901803339776 B)
[2025-07-21 22:10:11] 2025-07-22 05:09:59,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-21 22:10:11] 2025-07-22 05:09:59,275 | INFO     | current server update state: UPDATING_FINAL
[2025-07-21 22:10:11] 2025-07-22 05:09:59,275 | INFO     | update_server=False
[2025-07-21 22:10:11] 2025-07-22 05:09:59,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-21 22:10:11] 2025-07-22 05:09:59,275 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-21 22:10:11] 2025-07-22 05:09:59,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-21 22:10:11] 2025-07-22 05:09:59,276 | INFO     | found 0 job(s) in 20 queues
[2025-07-21 22:10:11] 2025-07-22 05:09:59,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-21 22:10:11] 2025-07-22 05:09:59,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-21 22:10:11] 2025-07-22 05:09:59,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-21 22:10:11] 2025-07-22 05:09:59,433 | INFO     | all data control threads have been joined
[2025-07-21 22:10:11] 2025-07-22 05:09:59,829 | INFO     | all job control threads have been joined
[2025-07-21 22:10:11] 2025-07-22 05:10:00,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-21 22:10:11] 2025-07-22 05:10:00,266 | INFO     | aborting loop
[2025-07-21 22:10:11] 2025-07-22 05:10:00,280 | INFO     | [job] retrieve thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:00,281 | INFO     | [job] queue monitor thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:00,292 | INFO     | [payload] execute_payloads thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:00,308 | INFO     | [payload] validate_post thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:00,438 | INFO     | [data] control thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:00,445 | INFO     | [data] copytool_in thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:00,535 | INFO     | all payload control threads have been joined
[2025-07-21 22:10:11] 2025-07-22 05:10:00,834 | INFO     | [job] control thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:00,891 | INFO     | [payload] failed_post thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:01,271 | INFO     | [job] job monitor thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:01,282 | INFO     | [data] copytool_out thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:01,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-21 22:10:11] 2025-07-22 05:10:01,427 | INFO     | [job] validate thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:01,541 | INFO     | [payload] control thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:01,598 | INFO     | [job] create_data_payload thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:01,703 | INFO     | [payload] validate_pre thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:01,733 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:05,405 | INFO     | [data] queue_monitor thread has finished
[2025-07-21 22:10:11] 2025-07-22 05:10:06,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336379844416)>', '<ExcThread(monitor, started 140335682406144)>']
[2025-07-21 22:10:11] 2025-07-22 05:10:06,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-21 22:10:11] 2025-07-22 05:10:06,306 | INFO     | [monitor] control thread has ended
[2025-07-21 22:10:11] 2025-07-22 05:10:11,090 | INFO     | all workflow threads have been joined
[2025-07-21 22:10:11] 2025-07-22 05:10:11,090 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-21 22:10:11] 2025-07-22 05:10:11,090 | INFO     | traces error code: 0
[2025-07-21 22:10:11] 2025-07-22 05:10:11,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-21 22:10:11] 2025-07-22 05:10:11,219 [wrapper] ==== pilot stdout END ====
[2025-07-21 22:10:11] 2025-07-22 05:10:11,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-21 22:10:11] 2025-07-22 05:10:11,223 [wrapper] pilotpid: 610068
[2025-07-21 22:10:11] 2025-07-22 05:10:11,225 [wrapper] Pilot exit status: 0
[2025-07-21 22:10:11] 2025-07-22 05:10:11,233 [wrapper] pandaids: 6741946168
[2025-07-21 22:10:11] 2025-07-22 05:10:11,284 [wrapper] cleanup supervisor_pilot  610074 610069
[2025-07-21 22:10:11] 2025-07-22 05:10:11,287 [wrapper] Test setup, not cleaning
[2025-07-21 22:10:11] 2025-07-22 05:10:11,289 [wrapper] apfmon messages muted
[2025-07-21 22:10:11] 2025-07-22 05:10:11,291 [wrapper] ==== wrapper stdout END ====
[2025-07-21 22:10:11] 2025-07-22 05:10:11,293 [wrapper] ==== wrapper stderr END ====
[2025-07-21 22:10:11]  *** Error codes and diagnostics ***
[2025-07-21 22:10:11]     "exeErrorCode": 65,
[2025-07-21 22:10:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 22:10:11]     "pilotErrorCode": 1305,
[2025-07-21 22:10:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 22:10:11]  *** Listing of results directory ***
[2025-07-21 22:10:11] total 313188
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc    530466 Jul 21 20:01 pilot3.tar.gz
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc      5112 Jul 21 20:06 queuedata.json
[2025-07-21 22:10:11] -rwx------. 1 boinc boinc     36292 Jul 21 20:07 runpilot2-wrapper.sh
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc       100 Jul 21 22:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-21 22:10:11] -rwxr-xr-x. 1 boinc boinc      7986 Jul 21 22:07 run_atlas
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc       105 Jul 21 22:07 job.xml
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc      6596 Jul 21 22:07 init_data.xml
[2025-07-21 22:10:11] -rw-r--r--. 2 boinc boinc 316633777 Jul 21 22:07 EVNT.45697521._000179.pool.root.1
[2025-07-21 22:10:11] -rw-r--r--. 2 boinc boinc     15095 Jul 21 22:07 start_atlas.sh
[2025-07-21 22:10:11] drwxrwx--x. 2 boinc boinc      4096 Jul 21 22:07 shared
[2025-07-21 22:10:11] -rw-r--r--. 2 boinc boinc    542908 Jul 21 22:07 input.tar.gz
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc         0 Jul 21 22:07 boinc_lockfile
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc      2634 Jul 21 22:07 pandaJob.out
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc    977326 Jul 21 22:07 agis_schedconf.cvmfs.json
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc   1593055 Jul 21 22:07 agis_ddmendpoints.agis.ALL.json
[2025-07-21 22:10:11] drwx------. 4 boinc boinc      4096 Jul 21 22:07 pilot3
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc       522 Jul 21 22:07 boinc_task_state.xml
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc       988 Jul 21 22:07 memory_monitor_summary.json
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc     20940 Jul 21 22:07 log.45697523._004490.job.log.tgz.1
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc        95 Jul 21 22:09 pilot_heartbeat.json
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc      8401 Jul 21 22:09 heartbeat.json
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc        22 Jul 21 22:10 wrapper_checkpoint.txt
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc      8192 Jul 21 22:10 boinc_mmap_file
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc      4479 Jul 21 22:10 pilotlog.txt
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc     74203 Jul 21 22:10 log.45697523._004490.job.log.1
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc       188 Jul 21 22:10 output.list
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc       620 Jul 21 22:10 runtime_log
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc    112640 Jul 21 22:10 result.tar.gz
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc      8485 Jul 21 22:10 runtime_log.err
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc       647 Jul 21 22:10 J11MDmbWIy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms9HLDmU5H5sn.diag
[2025-07-21 22:10:11] -rw-r--r--. 1 boinc boinc     21551 Jul 21 22:10 stderr.txt
[2025-07-21 22:10:11] No HITS result produced
[2025-07-21 22:10:11]  *** Contents of shared directory: ***
[2025-07-21 22:10:11] total 309880
[2025-07-21 22:10:11] -rw-r--r--. 2 boinc boinc 316633777 Jul 21 22:07 ATLAS.root_0
[2025-07-21 22:10:11] -rw-r--r--. 2 boinc boinc     15095 Jul 21 22:07 start_atlas.sh
[2025-07-21 22:10:11] -rw-r--r--. 2 boinc boinc    542908 Jul 21 22:07 input.tar.gz
[2025-07-21 22:10:11] -rw-------. 1 boinc boinc    112640 Jul 21 22:10 result.tar.gz
22:10:12 (606494): run_atlas exited; CPU time 20.141871
22:10:12 (606494): called boinc_finish(0)

</stderr_txt>
]]>

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