Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:52:54 (3989724): wrapper (7.7.26015): starting
05:52:54 (3989724): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 05:52:54] Arguments: --nthreads 4
[2025-07-25 05:52:54] Threads: 4
[2025-07-25 05:52:54] Checking for CVMFS
[2025-07-25 05:52:54] No cvmfs_config command found, will try listing directly
[2025-07-25 05:52:54] CVMFS is ok
[2025-07-25 05:52:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 05:52:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 05:52:54] Further information can be found at the LHC@home message board.
[2025-07-25 05:52:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 05:52:54] Checking for apptainer binary...
[2025-07-25 05:52:54] which: no apptainer in ((null))
[2025-07-25 05:52:54] apptainer is not installed, using version from CVMFS
[2025-07-25 05:52:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 05:52:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-07-25 05:52:55] apptainer works
[2025-07-25 05:52:55] Set ATHENA_PROC_NUMBER=4
[2025-07-25 05:52:55] Set ATHENA_CORE_NUMBER=4
[2025-07-25 05:52:55] Starting ATLAS job with PandaID=6741692301
[2025-07-25 05:52:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 10:31:26]  *** The last 200 lines of the pilot log: ***
[2025-07-25 10:31:26] 2025-07-25 08:31:06,405 | INFO     | current chi2=1.3924036508064668 (change=-0.029343432844658266 %)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,405 | INFO     | right removable region: 267
[2025-07-25 10:31:26] 2025-07-25 08:31:06,405 | INFO     | sum of square deviations: 5968658887.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,407 | INFO     | sum of deviations: 10101020744.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,407 | INFO     | mean x: 1753424059.5
[2025-07-25 10:31:26] 2025-07-25 08:31:06,407 | INFO     | mean y: 2364644.925373134
[2025-07-25 10:31:26] 2025-07-25 08:31:06,407 | INFO     | -- intersect: -2965031068.81098
[2025-07-25 10:31:26] 2025-07-25 08:31:06,407 | INFO     | intersect: -2965031068.81098
[2025-07-25 10:31:26] 2025-07-25 08:31:06,408 | INFO     | chi2: 0.009133570888385715
[2025-07-25 10:31:26] 2025-07-25 08:31:06,408 | INFO     | current chi2=0.009133570888385715 (change=99.34385039953507 %)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,408 | INFO     | sum of square deviations: 5640782972.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,410 | INFO     | sum of deviations: 8708164007.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,410 | INFO     | mean x: 1753424212.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,410 | INFO     | mean y: 2365281.9011406843
[2025-07-25 10:31:26] 2025-07-25 08:31:06,410 | INFO     | -- intersect: -2704547160.526495
[2025-07-25 10:31:26] 2025-07-25 08:31:06,410 | INFO     | intersect: -2704547160.526495
[2025-07-25 10:31:26] 2025-07-25 08:31:06,411 | INFO     | chi2: 0.0053659853982524
[2025-07-25 10:31:26] 2025-07-25 08:31:06,411 | INFO     | current chi2=0.0053659853982524 (change=41.24986312773016 %)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,411 | INFO     | sum of square deviations: 5325139844.5
[2025-07-25 10:31:26] 2025-07-25 08:31:06,413 | INFO     | sum of deviations: 10462987637.5
[2025-07-25 10:31:26] 2025-07-25 08:31:06,413 | INFO     | mean x: 1753424364.5
[2025-07-25 10:31:26] 2025-07-25 08:31:06,413 | INFO     | mean y: 2364432.6627906975
[2025-07-25 10:31:26] 2025-07-25 08:31:06,413 | INFO     | -- intersect: -3442814094.9965863
[2025-07-25 10:31:26] 2025-07-25 08:31:06,413 | INFO     | intersect: -3442814094.9965863
[2025-07-25 10:31:26] 2025-07-25 08:31:06,414 | INFO     | chi2: 0.002277273921415973
[2025-07-25 10:31:26] 2025-07-25 08:31:06,414 | INFO     | current chi2=0.002277273921415973 (change=57.56093704321973 %)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,414 | INFO     | sum of square deviations: 5021496942.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,416 | INFO     | sum of deviations: 9582779567.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,416 | INFO     | mean x: 1753424517.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,416 | INFO     | mean y: 2364879.703557312
[2025-07-25 10:31:26] 2025-07-25 08:31:06,416 | INFO     | -- intersect: -3343784849.721976
[2025-07-25 10:31:26] 2025-07-25 08:31:06,416 | INFO     | intersect: -3343784849.721976
[2025-07-25 10:31:26] 2025-07-25 08:31:06,417 | INFO     | chi2: 0.0007876591556444937
[2025-07-25 10:31:26] 2025-07-25 08:31:06,417 | INFO     | current chi2=0.0007876591556444937 (change=65.41219094298766 %)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,417 | INFO     | sum of square deviations: 4729621702.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,419 | INFO     | sum of deviations: 8491020446.499999
[2025-07-25 10:31:26] 2025-07-25 08:31:06,419 | INFO     | mean x: 1753424669.5
[2025-07-25 10:31:26] 2025-07-25 08:31:06,419 | INFO     | mean y: 2365450.1330645164
[2025-07-25 10:31:26] 2025-07-25 08:31:06,419 | INFO     | -- intersect: -3145532131.998337
[2025-07-25 10:31:26] 2025-07-25 08:31:06,419 | INFO     | intersect: -3145532131.998337
[2025-07-25 10:31:26] 2025-07-25 08:31:06,419 | INFO     | chi2: 0.0005994062614330784
[2025-07-25 10:31:26] 2025-07-25 08:31:06,420 | INFO     | current chi2=0.0005994062614330784 (change=23.900299115723396 %)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,420 | INFO     | left removable region: 50
[2025-07-25 10:31:26] 2025-07-25 08:31:06,420 | INFO     | sum of square deviations: 3168461268.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,420 | INFO     | 16683s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-25 10:31:26] 2025-07-25 08:31:06,422 | INFO     | sum of deviations: 4546147793.000001
[2025-07-25 10:31:26] 2025-07-25 08:31:06,422 | INFO     | mean x: 1753425249.0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,422 | INFO     | mean y: 2367116.474654378
[2025-07-25 10:31:26] 2025-07-25 08:31:06,422 | INFO     | -- intersect: -2513469326.419123
[2025-07-25 10:31:26] 2025-07-25 08:31:06,422 | INFO     | intersect: -2513469326.419123
[2025-07-25 10:31:26] 2025-07-25 08:31:06,423 | INFO     | chi2: 0.0002263525794898984
[2025-07-25 10:31:26] 2025-07-25 08:31:06,423 | INFO     | -- intersect: -2513469326.419123
[2025-07-25 10:31:26] 2025-07-25 08:31:06,423 | INFO     | current memory leak: 1.43 B/s (using 217 data points, chi2=0.00)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | could have reported an average CPU frequency of 2595 MHz (13 samples)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | ..............................
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | . Timing measurements:
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | . get job = 0 s
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | . initial setup = 1 s
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | . payload setup = 6 s
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | . stage-in = 0 s
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | . payload execution = 16650 s
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | . stage-out = 1 s
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | . log creation = 0 s
[2025-07-25 10:31:26] 2025-07-25 08:31:06,424 | INFO     | ..............................
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | 
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | job summary report
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | --------------------------------------------------
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | PanDA job id: 6741692301
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | task id: 45697532
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | errors: (none)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | pilot state: finished 
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | transexitcode: 0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,566 | INFO     | exeerrorcode: 0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | exeerrordiag: 
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | exitcode: 0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | exitmsg: OK
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | cpuconsumptiontime: 64523 s
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | nevents: 400
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | neventsw: 0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | pid: 4000441
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | pgrp: 4000441
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | corecount: 4
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | event service: False
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | sizes: {0: 2396715, 1: 2397582, 5: 2397844, 12: 2397900, 16661: 2429863, 16662: 2439067, 16667: 2439205}
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | --------------------------------------------------
[2025-07-25 10:31:26] 2025-07-25 08:31:06,567 | INFO     | 
[2025-07-25 10:31:26] 2025-07-25 08:31:06,568 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-07-25 10:31:26] 2025-07-25 08:31:06,587 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | job 6741692301 has completed (purged errors)
[2025-07-25 10:31:26] 2025-07-25 08:31:06,589 | INFO     | overall cleanup function is called
[2025-07-25 10:31:26] 2025-07-25 08:31:07,594 | INFO     | --- collectZombieJob: --- 10, [4000441]
[2025-07-25 10:31:26] 2025-07-25 08:31:07,594 | INFO     | zombie collector waiting for pid 4000441
[2025-07-25 10:31:26] 2025-07-25 08:31:07,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 10:31:26] 2025-07-25 08:31:07,594 | INFO     | collected zombie processes
[2025-07-25 10:31:26] 2025-07-25 08:31:07,594 | INFO     | will attempt to kill all subprocesses of pid=4000441
[2025-07-25 10:31:26] 2025-07-25 08:31:08,058 | INFO     | PID=3993457 has CPU usage=18.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 10:31:26] 2025-07-25 08:31:08,058 | INFO     | .. there are 12 such processes running
[2025-07-25 10:31:26] 2025-07-25 08:31:08,200 | INFO     | process IDs to be killed: [4000441] (in reverse order)
[2025-07-25 10:31:26] 2025-07-25 08:31:08,309 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 10:31:26] 2025-07-25 08:31:08,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 10:31:26] 2025-07-25 08:31:08,319 | INFO     | did not find any defunct processes belonging to 4000441
[2025-07-25 10:31:26] 2025-07-25 08:31:08,328 | INFO     | did not find any defunct processes belonging to 4000441
[2025-07-25 10:31:26] 2025-07-25 08:31:08,329 | INFO     | ready for new job
[2025-07-25 10:31:26] 2025-07-25 08:31:08,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 10:31:26] 2025-07-25 08:31:08,331 | INFO     | ***************************************
[2025-07-25 10:31:26] 2025-07-25 08:31:08,331 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 10:31:26] 2025-07-25 08:31:08,331 | INFO     | ***************************************
[2025-07-25 10:31:26] 2025-07-25 08:31:08,331 | INFO     | 
[2025-07-25 10:31:26] 2025-07-25 08:31:08,335 | INFO     | architecture information:
[2025-07-25 10:31:26] 2025-07-25 08:31:08,335 | INFO     | executing command: cat /etc/os-release
[2025-07-25 10:31:26] 2025-07-25 08:31:08,349 | INFO     | cat /etc/os-release:
[2025-07-25 10:31:26] NAME="CentOS Linux"
[2025-07-25 10:31:26] VERSION="7 (Core)"
[2025-07-25 10:31:26] ID="centos"
[2025-07-25 10:31:26] ID_LIKE="rhel fedora"
[2025-07-25 10:31:26] VERSION_ID="7"
[2025-07-25 10:31:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 10:31:26] ANSI_COLOR="0;31"
[2025-07-25 10:31:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 10:31:26] HOME_URL="https://www.centos.org/"
[2025-07-25 10:31:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 10:31:26] 
[2025-07-25 10:31:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 10:31:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 10:31:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 10:31:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 10:31:26] 
[2025-07-25 10:31:26] 2025-07-25 08:31:08,349 | INFO     | ***************************************
[2025-07-25 10:31:26] 2025-07-25 08:31:08,852 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-07-25 10:31:26] 2025-07-25 08:31:08,868 | INFO     | sufficient remaining disk space (648401649664 B)
[2025-07-25 10:31:26] 2025-07-25 08:31:08,869 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 10:31:26] 2025-07-25 08:31:08,869 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 10:31:26] 2025-07-25 08:31:08,869 | INFO     | update_server=False
[2025-07-25 10:31:26] 2025-07-25 08:31:08,869 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 10:31:26] 2025-07-25 08:31:08,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 10:31:26] 2025-07-25 08:31:08,869 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-25 10:31:26] 2025-07-25 08:31:08,870 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 10:31:26] 2025-07-25 08:31:08,870 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 10:31:26] 2025-07-25 08:31:08,870 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 10:31:26] 2025-07-25 08:31:08,946 | INFO     | all payload control threads have been joined
[2025-07-25 10:31:26] 2025-07-25 08:31:09,010 | INFO     | all job control threads have been joined
[2025-07-25 10:31:26] 2025-07-25 08:31:09,098 | INFO     | all data control threads have been joined
[2025-07-25 10:31:26] 2025-07-25 08:31:09,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 10:31:26] 2025-07-25 08:31:09,853 | INFO     | aborting loop
[2025-07-25 10:31:26] 2025-07-25 08:31:09,874 | INFO     | [job] retrieve thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:09,951 | INFO     | [payload] control thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:10,015 | INFO     | [job] control thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:10,104 | INFO     | [data] control thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:10,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 10:31:26] 2025-07-25 08:31:10,484 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:10,489 | INFO     | [job] validate thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:10,726 | INFO     | [data] copytool_in thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:10,787 | INFO     | [payload] failed_post thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:10,859 | INFO     | [job] job monitor thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:10,967 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:11,175 | INFO     | [payload] validate_post thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:11,233 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:11,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 10:31:26] 2025-07-25 08:31:12,255 | INFO     | [data] copytool_out thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:12,537 | INFO     | [job] queue monitor thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:12,875 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:19,530 | INFO     | job.realtimelogging is not enabled
[2025-07-25 10:31:26] 2025-07-25 08:31:20,535 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 10:31:26] 2025-07-25 08:31:20,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22552278251328)>', '<ExcThread(monitor, started 22552038569728)>']
[2025-07-25 10:31:26] 2025-07-25 08:31:20,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 10:31:26] 2025-07-25 08:31:20,920 | INFO     | [monitor] control thread has ended
[2025-07-25 10:31:26] 2025-07-25 08:31:25,904 | INFO     | all workflow threads have been joined
[2025-07-25 10:31:26] 2025-07-25 08:31:25,904 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 10:31:26] 2025-07-25 08:31:25,904 | INFO     | traces error code: 0
[2025-07-25 10:31:26] 2025-07-25 08:31:25,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 10:31:26] 2025-07-25 08:31:26,057 [wrapper] ==== pilot stdout END ====
[2025-07-25 10:31:26] 2025-07-25 08:31:26,060 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 10:31:26] 2025-07-25 08:31:26,062 [wrapper] pilotpid: 3993457
[2025-07-25 10:31:26] 2025-07-25 08:31:26,065 [wrapper] Pilot exit status: 0
[2025-07-25 10:31:26] 2025-07-25 08:31:26,075 [wrapper] pandaids: 6741692301
[2025-07-25 10:31:26] 2025-07-25 08:31:26,138 [wrapper] cleanup supervisor_pilot  407416 3993458
[2025-07-25 10:31:26] 2025-07-25 08:31:26,141 [wrapper] Test setup, not cleaning
[2025-07-25 10:31:26] 2025-07-25 08:31:26,144 [wrapper] apfmon messages muted
[2025-07-25 10:31:26] 2025-07-25 08:31:26,146 [wrapper] ==== wrapper stdout END ====
[2025-07-25 10:31:26] 2025-07-25 08:31:26,149 [wrapper] ==== wrapper stderr END ====
[2025-07-25 10:31:26]  *** Error codes and diagnostics ***
[2025-07-25 10:31:26]     "exeErrorCode": 0,
[2025-07-25 10:31:26]     "exeErrorDiag": "",
[2025-07-25 10:31:26]     "pilotErrorCode": 0,
[2025-07-25 10:31:26]     "pilotErrorDiag": "",
[2025-07-25 10:31:26]  *** Listing of results directory ***
[2025-07-25 10:31:26] total 605576
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc    530466 Jul 21 23:11 pilot3.tar.gz
[2025-07-25 10:31:26] -rwx------ 1 boinc boinc     36292 Jul 21 23:20 runpilot2-wrapper.sh
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc      5112 Jul 21 23:20 queuedata.json
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc       100 Jul 25 05:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 10:31:26] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 05:52 run_atlas
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc       105 Jul 25 05:52 job.xml
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc      6636 Jul 25 05:52 init_data.xml
[2025-07-25 10:31:26] -rw-r--r-- 2 boinc boinc 329760722 Jul 25 05:52 EVNT.45697530._000049.pool.root.1
[2025-07-25 10:31:26] -rw-r--r-- 2 boinc boinc     15095 Jul 25 05:52 start_atlas.sh
[2025-07-25 10:31:26] drwxrwx--x 2 boinc boinc      4096 Jul 25 05:52 shared
[2025-07-25 10:31:26] -rw-r--r-- 2 boinc boinc    542902 Jul 25 05:52 input.tar.gz
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc         0 Jul 25 05:52 boinc_lockfile
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc      2611 Jul 25 05:52 pandaJob.out
[2025-07-25 10:31:26] -rw------- 1 boinc boinc    979709 Jul 25 05:53 agis_schedconf.cvmfs.json
[2025-07-25 10:31:26] drwx------ 4 boinc boinc      4096 Jul 25 05:53 pilot3
[2025-07-25 10:31:26] -rw------- 1 boinc boinc 282595225 Jul 25 10:30 HITS.45697532._001210.pool.root.1
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc       530 Jul 25 10:30 boinc_task_state.xml
[2025-07-25 10:31:26] -rw------- 1 boinc boinc      1037 Jul 25 10:30 memory_monitor_summary.json
[2025-07-25 10:31:26] -rw------- 1 boinc boinc        95 Jul 25 10:30 pilot_heartbeat.json
[2025-07-25 10:31:26] -rw------- 1 boinc boinc   1593052 Jul 25 10:31 agis_ddmendpoints.agis.ALL.json
[2025-07-25 10:31:26] -rw------- 1 boinc boinc    362498 Jul 25 10:31 log.45697532._001210.job.log.tgz.1
[2025-07-25 10:31:26] -rw------- 1 boinc boinc      7824 Jul 25 10:31 heartbeat.json
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc      8192 Jul 25 10:31 boinc_mmap_file
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc        28 Jul 25 10:31 wrapper_checkpoint.txt
[2025-07-25 10:31:26] -rw------- 1 boinc boinc      4562 Jul 25 10:31 pilotlog.txt
[2025-07-25 10:31:26] -rw------- 1 boinc boinc   1573733 Jul 25 10:31 log.45697532._001210.job.log.1
[2025-07-25 10:31:26] -rw------- 1 boinc boinc       357 Jul 25 10:31 output.list
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc       620 Jul 25 10:31 runtime_log
[2025-07-25 10:31:26] -rw------- 1 boinc boinc   1955840 Jul 25 10:31 result.tar.gz
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc      9027 Jul 25 10:31 runtime_log.err
[2025-07-25 10:31:26] -rw------- 1 boinc boinc       665 Jul 25 10:31 AHbKDmb7Cy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZStKDmkHOS7m.diag
[2025-07-25 10:31:26] -rw-r--r-- 1 boinc boinc     20815 Jul 25 10:31 stderr.txt
[2025-07-25 10:31:26] HITS file was successfully produced:
[2025-07-25 10:31:26] -rw------- 1 boinc boinc 282595225 Jul 25 10:30 shared/HITS.pool.root.1
[2025-07-25 10:31:26]  *** Contents of shared directory: ***
[2025-07-25 10:31:26] total 600472
[2025-07-25 10:31:26] -rw-r--r-- 2 boinc boinc 329760722 Jul 25 05:52 ATLAS.root_0
[2025-07-25 10:31:26] -rw-r--r-- 2 boinc boinc     15095 Jul 25 05:52 start_atlas.sh
[2025-07-25 10:31:26] -rw-r--r-- 2 boinc boinc    542902 Jul 25 05:52 input.tar.gz
[2025-07-25 10:31:26] -rw------- 1 boinc boinc 282595225 Jul 25 10:30 HITS.pool.root.1
[2025-07-25 10:31:26] -rw------- 1 boinc boinc   1955840 Jul 25 10:31 result.tar.gz
10:31:28 (3989724): run_atlas exited; CPU time 65143.107591
10:31:28 (3989724): called boinc_finish(0)

</stderr_txt>
]]>

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