Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:57:09 (3725384): wrapper (7.7.26015): starting
00:57:09 (3725384): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 00:57:09] Arguments: --nthreads 8
[2025-07-22 00:57:09] Threads: 8
[2025-07-22 00:57:09] Checking for CVMFS
[2025-07-22 00:57:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 00:57:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 00:57:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 00:57:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 00:57:09] 2.13.1.0 665382 520 65288 148609 3 188 32471280 40960001 13687 16776704 0 7867250 99.999 20222 56172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-22 00:57:09] CVMFS is ok
[2025-07-22 00:57:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 00:57:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 00:57:09] Further information can be found at the LHC@home message board.
[2025-07-22 00:57:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 00:57:09] Checking for apptainer binary...
[2025-07-22 00:57:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 00:57:09] Running /usr/bin/apptainer --version
[2025-07-22 00:57:09] apptainer version 1.4.1-1.el9
[2025-07-22 00:57:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 00:57:10] c-208-40.aglt2.org
[2025-07-22 00:57:10] apptainer works
[2025-07-22 00:57:10] Set ATHENA_PROC_NUMBER=8
[2025-07-22 00:57:10] Set ATHENA_CORE_NUMBER=8
[2025-07-22 00:57:10] Starting ATLAS job with PandaID=6741710879
[2025-07-22 00:57:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 02:10:09]  *** The last 200 lines of the pilot log: ***
[2025-07-22 02:10:09]  replicas=None
[2025-07-22 02:10:09]  scope=mc23_13p6TeV
[2025-07-22 02:10:09]  status=None
[2025-07-22 02:10:09]  status_code=0
[2025-07-22 02:10:09]  storage_token=
[2025-07-22 02:10:09]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6741710879/log.45697472._000019.job.log.tgz.1
[2025-07-22 02:10:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/54/log.45697472._000019.job.log.tgz.1
[2025-07-22 02:10:09]  workdir=None
[2025-07-22 02:10:09] ]
[2025-07-22 02:10:09] 2025-07-22 06:09:27,672 | INFO     | transferring file log.45697472._000019.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6741710879/log.45697472._000019.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-22 02:10:09] 2025-07-22 06:09:27,672 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6741710879/log.45697472._000019.job.log.tgz.1 /tmp/boinchome/slots/4/log.45697472._000019.job
[2025-07-22 02:10:09] 2025-07-22 06:09:27,691 | INFO     | adding to output.list: log.45697472._000019.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/54/log.45697472._000019.job.log.tg
[2025-07-22 02:10:09] 2025-07-22 06:09:27,691 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-22 02:10:09] 2025-07-22 06:09:27,691 | INFO     | summary of transferred files:
[2025-07-22 02:10:09] 2025-07-22 06:09:27,691 | INFO     |  -- lfn=log.45697472._000019.job.log.tgz.1, status_code=0, status=transferred
[2025-07-22 02:10:09] 2025-07-22 06:09:27,692 | INFO     | stage-out finished correctly
[2025-07-22 02:10:09] 2025-07-22 06:09:28,584 | INFO     | PID=3728982 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-22 02:10:09] 2025-07-22 06:09:28,584 | INFO     | .. there are 16 such processes running
[2025-07-22 02:10:09] 2025-07-22 06:09:29,635 | INFO     | monitor loop #314: job 0:6741710879 is in state 'finished'
[2025-07-22 02:10:09] 2025-07-22 06:09:29,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 02:10:09] 2025-07-22 06:09:30,836 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-22 02:10:09] 2025-07-22 06:09:32,138 | INFO     | monitor loop #315: job 0:6741710879 is in state 'finished'
[2025-07-22 02:10:09] 2025-07-22 06:09:32,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 02:10:09] 2025-07-22 06:09:33,407 | INFO     | job 6741710879 has state=finished
[2025-07-22 02:10:09] 2025-07-22 06:09:33,408 | INFO     | preparing for final server update for job 6741710879 in state='finished'
[2025-07-22 02:10:09] 2025-07-22 06:09:33,408 | INFO     | this job has now completed (state=finished)
[2025-07-22 02:10:09] 2025-07-22 06:09:33,408 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-22 02:10:09] 2025-07-22 06:09:33,408 | INFO     | log transfer has been attempted: DONE
[2025-07-22 02:10:09] 2025-07-22 06:09:33,408 | INFO     | job 6741710879 has finished - writing final server update
[2025-07-22 02:10:09] 2025-07-22 06:09:33,408 | INFO     | total number of processed events: 400 (read)
[2025-07-22 02:10:09] 2025-07-22 06:09:33,410 | INFO     | executing command: lscpu
[2025-07-22 02:10:09] 2025-07-22 06:09:33,466 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-22 02:10:09] 2025-07-22 06:09:34,642 | INFO     | monitor loop #316: job 0:6741710879 is in state 'finished'
[2025-07-22 02:10:09] 2025-07-22 06:09:34,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 02:10:09] 2025-07-22 06:09:37,115 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-22 02:10:09] 2025-07-22 06:09:37,120 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3730.739914062503
[2025-07-22 02:10:09] 2025-07-22 06:09:37,133 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6741710879/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 02:10:09] 2025-07-22 06:09:37,133 | INFO     | extracted standard info from prmon json
[2025-07-22 02:10:09] 2025-07-22 06:09:37,133 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 02:10:09] 2025-07-22 06:09:37,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 02:10:09] 2025-07-22 06:09:37,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 02:10:09] 2025-07-22 06:09:37,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | fitting pss+swap vs Time
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | sum of square deviations: 81266640.0
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | sum of deviations: 289687902.0
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | mean x: 1753162490.5
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | mean y: 2570325.25
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | -- intersect: -6246857038.032645
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | intersect: -6246857038.032645
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | chi2: 0.0006235045689342081
[2025-07-22 02:10:09] 2025-07-22 06:09:37,135 | INFO     | -- intersect: -6246857038.032645
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | current memory leak: 3.56 B/s (using 64 data points, chi2=0.00)
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | could have reported an average CPU frequency of 3776 MHz (6 samples)
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | ..............................
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | . Timing measurements:
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | . get job = 0 s
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | . initial setup = 2 s
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | . payload setup = 5 s
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | . stage-in = 0 s
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | . payload execution = 4304 s
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | . stage-out = 0 s
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | . log creation = 0 s
[2025-07-22 02:10:09] 2025-07-22 06:09:37,136 | INFO     | ..............................
[2025-07-22 02:10:09] 2025-07-22 06:09:37,191 | INFO     | 
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | job summary report
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | --------------------------------------------------
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | PanDA job id: 6741710879
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | task id: 45697472
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | errors: (none)
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | pilot state: finished 
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | transexitcode: 0
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | exeerrorcode: 0
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | exeerrordiag: 
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | exitcode: 0
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | exitmsg: OK
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | cpuconsumptiontime: 32423 s
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | nevents: 400
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | neventsw: 0
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | pid: 3736291
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | pgrp: 3736291
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | corecount: 8
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | event service: False
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | sizes: {0: 2397532, 4: 2397794, 11: 2397822, 4313: 2424016, 4314: 2433014, 4317: 2433070, 4323: 2433392}
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | --------------------------------------------------
[2025-07-22 02:10:09] 2025-07-22 06:09:37,192 | INFO     | 
[2025-07-22 02:10:09] 2025-07-22 06:09:37,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-07-22 02:10:09] 2025-07-22 06:09:37,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,209 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | job 6741710879 has completed (purged errors)
[2025-07-22 02:10:09] 2025-07-22 06:09:37,210 | INFO     | overall cleanup function is called
[2025-07-22 02:10:09] 2025-07-22 06:09:38,218 | INFO     | --- collectZombieJob: --- 10, [3736291]
[2025-07-22 02:10:09] 2025-07-22 06:09:38,218 | INFO     | zombie collector waiting for pid 3736291
[2025-07-22 02:10:09] 2025-07-22 06:09:38,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 02:10:09] 2025-07-22 06:09:38,219 | INFO     | collected zombie processes
[2025-07-22 02:10:09] 2025-07-22 06:09:38,219 | INFO     | will attempt to kill all subprocesses of pid=3736291
[2025-07-22 02:10:09] 2025-07-22 06:09:38,566 | INFO     | process IDs to be killed: [3736291] (in reverse order)
[2025-07-22 02:10:09] 2025-07-22 06:09:38,678 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 02:10:09] 2025-07-22 06:09:38,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 02:10:09] 2025-07-22 06:09:38,696 | INFO     | did not find any defunct processes belonging to 3736291
[2025-07-22 02:10:09] 2025-07-22 06:09:38,710 | INFO     | did not find any defunct processes belonging to 3736291
[2025-07-22 02:10:09] 2025-07-22 06:09:38,710 | INFO     | ready for new job
[2025-07-22 02:10:09] 2025-07-22 06:09:38,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 02:10:09] 2025-07-22 06:09:38,712 | INFO     | ***************************************
[2025-07-22 02:10:09] 2025-07-22 06:09:38,712 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 02:10:09] 2025-07-22 06:09:38,712 | INFO     | ***************************************
[2025-07-22 02:10:09] 2025-07-22 06:09:38,712 | INFO     | 
[2025-07-22 02:10:09] 2025-07-22 06:09:38,717 | INFO     | architecture information:
[2025-07-22 02:10:09] 2025-07-22 06:09:38,717 | INFO     | executing command: cat /etc/os-release
[2025-07-22 02:10:09] 2025-07-22 06:09:38,731 | INFO     | cat /etc/os-release:
[2025-07-22 02:10:09] NAME="CentOS Linux"
[2025-07-22 02:10:09] VERSION="7 (Core)"
[2025-07-22 02:10:09] ID="centos"
[2025-07-22 02:10:09] ID_LIKE="rhel fedora"
[2025-07-22 02:10:09] VERSION_ID="7"
[2025-07-22 02:10:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 02:10:09] ANSI_COLOR="0;31"
[2025-07-22 02:10:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 02:10:09] HOME_URL="https://www.centos.org/"
[2025-07-22 02:10:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 02:10:09] 
[2025-07-22 02:10:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 02:10:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 02:10:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 02:10:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 02:10:09] 
[2025-07-22 02:10:09] 2025-07-22 06:09:38,731 | INFO     | ***************************************
[2025-07-22 02:10:09] 2025-07-22 06:09:39,234 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-07-22 02:10:09] 2025-07-22 06:09:39,250 | INFO     | sufficient remaining disk space (158417813504 B)
[2025-07-22 02:10:09] 2025-07-22 06:09:39,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 02:10:09] 2025-07-22 06:09:39,250 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 02:10:09] 2025-07-22 06:09:39,250 | INFO     | update_server=False
[2025-07-22 02:10:09] 2025-07-22 06:09:39,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 02:10:09] 2025-07-22 06:09:39,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 02:10:09] 2025-07-22 06:09:39,251 | INFO     | all job control threads have been joined
[2025-07-22 02:10:09] 2025-07-22 06:09:39,653 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 02:10:09] 2025-07-22 06:09:39,653 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 02:10:09] 2025-07-22 06:09:39,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 02:10:09] 2025-07-22 06:09:39,653 | INFO     | will abort loop
[2025-07-22 02:10:09] 2025-07-22 06:09:39,885 | INFO     | all data control threads have been joined
[2025-07-22 02:10:09] 2025-07-22 06:09:40,255 | INFO     | [job] retrieve thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,256 | INFO     | [job] control thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,409 | INFO     | [data] copytool_in thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,454 | INFO     | [job] validate thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,455 | INFO     | all payload control threads have been joined
[2025-07-22 02:10:09] 2025-07-22 06:09:40,659 | INFO     | [job] job monitor thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,737 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,771 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,891 | INFO     | [data] control thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,944 | INFO     | [payload] failed_post thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:40,970 | INFO     | [payload] validate_post thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:41,257 | INFO     | [data] copytool_out thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:41,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 02:10:09] 2025-07-22 06:09:41,460 | INFO     | [payload] control thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:41,629 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:42,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 02:10:09] 2025-07-22 06:09:43,203 | INFO     | [job] queue monitor thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:45,408 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:49,700 | INFO     | job.realtimelogging is not enabled
[2025-07-22 02:10:09] 2025-07-22 06:09:50,706 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 02:10:09] 2025-07-22 06:09:52,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976098658112)>', '<ExcThread(monitor, started 139975825790720)>']
[2025-07-22 02:10:09] 2025-07-22 06:09:57,138 | INFO     | all workflow threads have been joined
[2025-07-22 02:10:09] 2025-07-22 06:09:57,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 02:10:09] 2025-07-22 06:09:57,138 | INFO     | traces error code: 0
[2025-07-22 02:10:09] 2025-07-22 06:09:57,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 02:10:09] 2025-07-22 06:10:09,073 | INFO     | PID=3728982 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 02:10:09] 2025-07-22 06:10:09,073 | INFO     | .. there are 15 such processes running
[2025-07-22 02:10:09] 2025-07-22 06:10:09,073 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 02:10:09] 2025-07-22 06:10:09,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 02:10:09] 2025-07-22 06:10:09,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 02:10:09] 2025-07-22 06:10:09,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 02:10:09] 2025-07-22 06:10:09,074 | INFO     | [monitor] control thread has ended
[2025-07-22 02:10:09] 2025-07-22 06:10:09,154 [wrapper] ==== pilot stdout END ====
[2025-07-22 02:10:09] 2025-07-22 06:10:09,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 02:10:09] 2025-07-22 06:10:09,157 [wrapper] pilotpid: 3728982
[2025-07-22 02:10:09] 2025-07-22 06:10:09,159 [wrapper] Pilot exit status: 0
[2025-07-22 02:10:09] 2025-07-22 06:10:09,166 [wrapper] pandaids: 6741710879
[2025-07-22 02:10:09] 2025-07-22 06:10:09,248 [wrapper] cleanup supervisor_pilot 3956371 3728983
[2025-07-22 02:10:09] 2025-07-22 06:10:09,250 [wrapper] Test setup, not cleaning
[2025-07-22 02:10:09] 2025-07-22 06:10:09,252 [wrapper] apfmon messages muted
[2025-07-22 02:10:09] 2025-07-22 06:10:09,254 [wrapper] ==== wrapper stdout END ====
[2025-07-22 02:10:09] 2025-07-22 06:10:09,257 [wrapper] ==== wrapper stderr END ====
[2025-07-22 02:10:09]  *** Error codes and diagnostics ***
[2025-07-22 02:10:09]     "exeErrorCode": 0,
[2025-07-22 02:10:09]     "exeErrorDiag": "",
[2025-07-22 02:10:09]     "pilotErrorCode": 0,
[2025-07-22 02:10:09]     "pilotErrorDiag": "",
[2025-07-22 02:10:09]  *** Listing of results directory ***
[2025-07-22 02:10:09] total 595176
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 21:12 pilot3.tar.gz
[2025-07-22 02:10:09] -rwx------. 1 boincer umatlas     36292 Jul 21 21:14 runpilot2-wrapper.sh
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 21:14 queuedata.json
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas       100 Jul 22 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 02:10:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 22 00:57 run_atlas
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas       105 Jul 22 00:57 job.xml
[2025-07-22 02:10:09] -rw-r--r--. 2 boincer umatlas 330115592 Jul 22 00:57 EVNT.45697470._000001.pool.root.1
[2025-07-22 02:10:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 00:57 start_atlas.sh
[2025-07-22 02:10:09] drwxrwx--x. 2 boincer umatlas      4096 Jul 22 00:57 shared
[2025-07-22 02:10:09] -rw-r--r--. 2 boincer umatlas    542889 Jul 22 00:57 input.tar.gz
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas         0 Jul 22 00:57 boinc_lockfile
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas      2605 Jul 22 00:57 pandaJob.out
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas    977326 Jul 22 00:57 agis_schedconf.cvmfs.json
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas   1593055 Jul 22 00:57 agis_ddmendpoints.agis.ALL.json
[2025-07-22 02:10:09] drwx------. 4 boincer umatlas      4096 Jul 22 00:57 pilot3
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas      7171 Jul 22 02:00 init_data.xml
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas 273988559 Jul 22 02:08 HITS.45697472._000019.pool.root.1
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas       529 Jul 22 02:09 boinc_task_state.xml
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas      1030 Jul 22 02:09 memory_monitor_summary.json
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas    311415 Jul 22 02:09 log.45697472._000019.job.log.tgz.1
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas      7754 Jul 22 02:09 heartbeat.json
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 02:10 boinc_mmap_file
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas        27 Jul 22 02:10 wrapper_checkpoint.txt
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas       823 Jul 22 02:10 pilotlog.txt
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas        95 Jul 22 02:10 pilot_heartbeat.json
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas    430164 Jul 22 02:10 log.45697472._000019.job.log.1
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas       357 Jul 22 02:10 output.list
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas       620 Jul 22 02:10 runtime_log
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas    757760 Jul 22 02:10 result.tar.gz
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas      8660 Jul 22 02:10 runtime_log.err
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas       651 Jul 22 02:10 Hq2NDmQlGy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmG6tKDmyP2jwm.diag
[2025-07-22 02:10:09] -rw-r--r--. 1 boincer umatlas     21906 Jul 22 02:10 stderr.txt
[2025-07-22 02:10:09] HITS file was successfully produced:
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas 273988559 Jul 22 02:08 shared/HITS.pool.root.1
[2025-07-22 02:10:09]  *** Contents of shared directory: ***
[2025-07-22 02:10:09] total 591244
[2025-07-22 02:10:09] -rw-r--r--. 2 boincer umatlas 330115592 Jul 22 00:57 ATLAS.root_0
[2025-07-22 02:10:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 22 00:57 start_atlas.sh
[2025-07-22 02:10:09] -rw-r--r--. 2 boincer umatlas    542889 Jul 22 00:57 input.tar.gz
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas 273988559 Jul 22 02:08 HITS.pool.root.1
[2025-07-22 02:10:09] -rw-------. 1 boincer umatlas    757760 Jul 22 02:10 result.tar.gz
02:10:10 (3725384): run_atlas exited; CPU time 32530.987535
02:10:10 (3725384): called boinc_finish(0)

</stderr_txt>
]]>

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