Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-22 07:43:39 (3568): Detected: vboxwrapper 26206
2025-07-22 07:43:39 (3568): Detected: BOINC client v8.2.5
2025-07-22 07:43:40 (3568): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-07-22 07:43:40 (3568): Successfully copied 'init_data.xml' to the shared directory.
2025-07-22 07:43:41 (3568): Create VM. (boinc_d923621366feb547, slot#15)
2025-07-22 07:43:41 (3568): Setting Memory Size for VM. (4096MB)
2025-07-22 07:43:41 (3568): Setting CPU Count for VM. (1)
2025-07-22 07:43:42 (3568): Setting Chipset Options for VM.
2025-07-22 07:43:42 (3568): Setting Graphics Controller Options for VM.
2025-07-22 07:43:42 (3568): Setting Boot Options for VM.
2025-07-22 07:43:43 (3568): Setting Network Configuration for NAT.
2025-07-22 07:43:43 (3568): Enabling VM Network Access.
2025-07-22 07:43:43 (3568): Disabling USB Support for VM.
2025-07-22 07:43:43 (3568): Disabling COM Port Support for VM.
2025-07-22 07:43:44 (3568): Disabling LPT Port Support for VM.
2025-07-22 07:43:44 (3568): Disabling Audio Support for VM.
2025-07-22 07:43:44 (3568): Disabling Clipboard Support for VM.
2025-07-22 07:43:44 (3568): Disabling Drag and Drop Support for VM.
2025-07-22 07:43:45 (3568): Adding storage controller(s) to VM.
2025-07-22 07:43:45 (3568): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-22 07:43:46 (3568): Adding VirtualBox Guest Additions to VM.
2025-07-22 07:43:46 (3568): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-22 07:43:46 (3568): forwarding host port 54405 to guest port 80
2025-07-22 07:43:46 (3568): Enabling remote desktop for VM.
2025-07-22 07:43:47 (3568): Required extension pack not installed, remote desktop not enabled.
2025-07-22 07:43:47 (3568): Enabling shared directory for VM.
2025-07-22 07:43:47 (3568): Starting VM using VBoxManage interface. (boinc_d923621366feb547, slot#15)
2025-07-22 07:43:56 (3568): Successfully started VM. (PID = '22884')
2025-07-22 07:43:56 (3568): Reporting VM Process ID to BOINC.
2025-07-22 07:43:56 (3568): Guest Log: BIOS: VirtualBox 7.1.8
2025-07-22 07:43:56 (3568): Guest Log: CPUID EDX: 0x178bfbff
2025-07-22 07:43:56 (3568): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-22 07:43:56 (3568): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-22 07:43:56 (3568): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-22 07:43:56 (3568): Detected: Web Application Enabled (http://localhost:54405)
2025-07-22 07:43:56 (3568): Preference change detected
2025-07-22 07:43:56 (3568): Setting CPU throttle for VM. (100%)
2025-07-22 07:43:56 (3568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-22 07:43:58 (3568): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-22 07:43:58 (3568): Guest Log: BIOS: Booting from Hard Disk...
2025-07-22 07:44:02 (3568): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-22 07:44:02 (3568): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-22 07:44:02 (3568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-22 07:44:11 (3568): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-22 07:44:11 (3568): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-22 07:44:33 (3568): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-22 07:44:33 (3568): Guest Log: 00:00:00.000312 main     Log opened 2025-07-22T07:44:31.720625000Z
2025-07-22 07:44:33 (3568): Guest Log: 00:00:00.000568 main     OS Product: Linux
2025-07-22 07:44:33 (3568): Guest Log: 00:00:00.000628 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-22 07:44:33 (3568): Guest Log: 00:00:00.000678 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-22 07:44:33 (3568): Guest Log: 00:00:00.000730 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-22 07:44:33 (3568): Guest Log: 00:00:00.000731 main     Process ID: 1256
2025-07-22 07:44:33 (3568): Guest Log: 00:00:00.000733 main     Package type: LINUX_64BITS_GENERIC
2025-07-22 07:44:33 (3568): Guest Log: 00:00:00.015792 main     5.2.32 r132073 started. Verbose level = 0
2025-07-22 07:44:34 (3568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-22 07:44:34 (3568): Guest Log: [INFO] Mounting shared directory
2025-07-22 07:44:34 (3568): Guest Log: [INFO] Checking for init_data.xml
2025-07-22 07:44:37 (3568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-22 07:44:37 (3568): Guest Log: [INFO] Detected branch: prod
2025-07-22 07:44:38 (3568): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-22 07:44:38 (3568): Guest Log: Copying input files
2025-07-22 07:44:43 (3568): Guest Log: 00:00:10.051414 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 370 889 000ns (GuestNow=1 753 163 083 400 397 000 ns GuestLast=1 753 170 271 771 286 000 ns fSetTimeLastLoop=true )
2025-07-22 07:44:44 (3568): Guest Log: Copied input files into RunAtlas.
2025-07-22 07:44:44 (3568): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-07-22 07:44:56 (3568): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-22 07:44:57 (3568): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-22 07:44:57 (3568): Guest Log: 2.6.3.0 1525 0 31556 148610 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-07-22 07:44:58 (3568): Guest Log: copied the webapp to /var/www
2025-07-22 07:44:58 (3568): Guest Log: core_number=1
2025-07-22 07:44:58 (3568): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-22 07:44:58 (3568): Guest Log:  *** Starting ATLAS job. (PandaID=6741708415 taskID=45697453) ***
2025-07-22 09:24:05 (3568): Status Report: Elapsed Time: '6000.000000'
2025-07-22 09:24:05 (3568): Status Report: CPU Time: '5908.187500'
2025-07-22 11:04:19 (3568): Status Report: Elapsed Time: '12000.000000'
2025-07-22 11:04:19 (3568): Status Report: CPU Time: '11880.468750'
2025-07-22 12:45:09 (3568): Status Report: Elapsed Time: '18000.000000'
2025-07-22 12:45:09 (3568): Status Report: CPU Time: '17862.015625'
2025-07-22 14:27:01 (3568): Status Report: Elapsed Time: '24000.000000'
2025-07-22 14:27:01 (3568): Status Report: CPU Time: '23910.437500'
2025-07-22 16:09:38 (3568): Status Report: Elapsed Time: '30000.137255'
2025-07-22 16:09:38 (3568): Status Report: CPU Time: '29996.953125'
2025-07-22 17:51:39 (3568): Status Report: Elapsed Time: '36000.137255'
2025-07-22 17:51:39 (3568): Status Report: CPU Time: '36062.312500'
2025-07-22 19:31:46 (3568): Status Report: Elapsed Time: '42000.137255'
2025-07-22 19:31:46 (3568): Status Report: CPU Time: '42042.500000'
2025-07-22 21:11:52 (3568): Status Report: Elapsed Time: '48000.137255'
2025-07-22 21:11:52 (3568): Status Report: CPU Time: '48021.984375'
2025-07-22 22:51:58 (3568): Status Report: Elapsed Time: '54000.137255'
2025-07-22 22:51:58 (3568): Status Report: CPU Time: '54001.671875'
2025-07-23 00:32:04 (3568): Status Report: Elapsed Time: '60000.137255'
2025-07-23 00:32:04 (3568): Status Report: CPU Time: '59980.328125'
2025-07-23 02:12:10 (3568): Status Report: Elapsed Time: '66000.137255'
2025-07-23 02:12:10 (3568): Status Report: CPU Time: '65959.218750'
2025-07-23 03:52:17 (3568): Status Report: Elapsed Time: '72000.137255'
2025-07-23 03:52:17 (3568): Status Report: CPU Time: '71937.625000'
2025-07-23 05:32:23 (3568): Status Report: Elapsed Time: '78000.137255'
2025-07-23 05:32:23 (3568): Status Report: CPU Time: '77918.359375'
2025-07-23 05:56:27 (3568): Guest Log:  *** Job finished ***
2025-07-23 05:56:27 (3568): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:10,264 | INFO     | all workflow threads have been joined
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:10,264 | INFO     | end of generic workflow (traces error code: 0)
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:10,264 | INFO     | traces error code: 0
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:10,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,208 | INFO     | PID=5789 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,209 | INFO     | found 0 job(s) in 20 queues
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,209 | INFO     | [monitor] control thread has ended
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,315 [wrapper] ==== pilot stdout END ====
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,320 [wrapper] ==== wrapper stdout RESUME ====
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,324 [wrapper] pilotpid: 5789
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,331 [wrapper] Pilot exit status: 0
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,382 [wrapper] pandaids: 6741708415
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,418 [wrapper] cleanup supervisor_pilot 18849 5790
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,424 [wrapper] Test setup, not cleaning
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,431 [wrapper] apfmon messages muted
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,436 [wrapper] ==== wrapper stdout END ====
2025-07-23 05:56:27 (3568): Guest Log: 2025-07-23 03:56:27,441 [wrapper] ==== wrapper stderr END ====
2025-07-23 05:56:27 (3568): Guest Log:  *** Error codes and diagnostics ***
2025-07-23 05:56:27 (3568): Guest Log:     "exeErrorCode": 0,
2025-07-23 05:56:27 (3568): Guest Log:     "exeErrorDiag": "",
2025-07-23 05:56:27 (3568): Guest Log:     "pilotErrorCode": 0,
2025-07-23 05:56:27 (3568): Guest Log:     "pilotErrorDiag": "",
2025-07-23 05:56:27 (3568): Guest Log:  *** Listing of results directory ***
2025-07-23 05:56:27 (3568): Guest Log: total 271516
2025-07-23 05:56:27 (3568): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 21 22:22 pilot3.tar.gz
2025-07-23 05:56:27 (3568): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 21 22:24 queuedata.json
2025-07-23 05:56:27 (3568): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 21 22:24 runpilot2-wrapper.sh
2025-07-23 05:56:27 (3568): Guest Log: -rwxr-xr-x. 1 atlas atlas      9395 Jul 22 05:44 init_data.xml
2025-07-23 05:56:27 (3568): Guest Log: -rwxr-xr-x. 1 atlas atlas    542906 Jul 22 05:44 input.tar.gz
2025-07-23 05:56:27 (3568): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 22 05:44 start_atlas.sh
2025-07-23 05:56:27 (3568): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 22 05:44 EVNT.45697451._000030.pool.root.1 -> /data/./ATLAS.root_0
2025-07-23 05:56:27 (3568): Guest Log: -rw-r--r--. 1 atlas atlas      2631 Jul 22 05:44 pandaJob.out
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas    977334 Jul 22 05:45 agis_schedconf.cvmfs.json
2025-07-23 05:56:27 (3568): Guest Log: drwx------. 4 atlas atlas      4096 Jul 22 05:45 pilot3
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas 258886790 Jul 23 03:54 HITS.45697453._000732.pool.root.1
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas      1020 Jul 23 03:55 memory_monitor_summary.json
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas   1593031 Jul 23 03:55 agis_ddmendpoints.agis.ALL.json
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas    841083 Jul 23 03:55 log.45697453._000732.job.log.tgz.1
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas      7764 Jul 23 03:55 heartbeat.json
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas        95 Jul 23 03:56 pilot_heartbeat.json
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas       744 Jul 23 03:56 pilotlog.txt
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas   6825605 Jul 23 03:56 log.45697453._000732.job.log.1
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas       357 Jul 23 03:56 output.list
2025-07-23 05:56:27 (3568): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 23 03:56 runtime_log
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas   7690240 Jul 23 03:56 result.tar.gz
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas       656 Jul 23 03:56 sjAODmW7Dy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIdtKDmA2m2Nn.diag
2025-07-23 05:56:27 (3568): Guest Log: -rw-r--r--. 1 atlas atlas      8460 Jul 23 03:56 runtime_log.err
2025-07-23 05:56:27 (3568): Guest Log: Looking for outputfile HITS.45697453._000732.pool.root.1
2025-07-23 05:56:27 (3568): Guest Log: HITS file was successfully produced
2025-07-23 05:56:27 (3568): Guest Log: -rw-------. 1 atlas atlas 258886790 Jul 23 03:54 /home/atlas/RunAtlas/HITS.45697453._000732.pool.root.1
2025-07-23 05:56:30 (3568): Guest Log: Successfully finished the ATLAS job!
2025-07-23 05:56:30 (3568): Guest Log: Copying the results back to the shared directory!
2025-07-23 05:56:30 (3568): Guest Log:  *** Contents of shared directory: ***
2025-07-23 05:56:30 (3568): Guest Log: total 570292
2025-07-23 05:56:30 (3568): Guest Log: -rwxrwxrwx. 1 root root 316823785 Jul 22 05:43 ATLAS.root_0
2025-07-23 05:56:30 (3568): Guest Log: -rwxrwxrwx. 1 root root 258886790 Jul 23 03:56 HITS.pool.root.1
2025-07-23 05:56:30 (3568): Guest Log: -rwxrwxrwx. 1 root root      9395 Jul 22 05:43 init_data.xml
2025-07-23 05:56:30 (3568): Guest Log: -rwxrwxrwx. 1 root root    542906 Jul 22 04:55 input.tar.gz
2025-07-23 05:56:30 (3568): Guest Log: -rwxrwxrwx. 1 root root   7690240 Jul 23 03:56 result.tar.gz
2025-07-23 05:56:30 (3568): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 22 04:55 start_atlas.sh
2025-07-23 05:56:30 (3568): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-23 05:56:30 (3568): VM Completion File Detected.
2025-07-23 05:56:30 (3568): Powering off VM.
2025-07-23 05:56:32 (3568): Successfully stopped VM.
2025-07-23 05:56:32 (3568): Deregistering VM. (boinc_d923621366feb547, slot#15)
2025-07-23 05:56:32 (3568): Removing network bandwidth throttle group from VM.
2025-07-23 05:56:32 (3568): Removing VM from VirtualBox.
05:56:37 (3568): called boinc_finish(0)

</stderr_txt>
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