Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:46:16 (655429): wrapper (7.7.26015): starting
21:46:16 (655429): wrapper: running run_atlas (--nthreads 8)
[2025-07-21 21:46:16] Arguments: --nthreads 8
[2025-07-21 21:46:16] Threads: 8
[2025-07-21 21:46:16] Checking for CVMFS
[2025-07-21 21:46:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 21:46:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 21:46:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 21:46:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 21:46:17] 2.11.3.0 25003 471244 227232 148609 2 458 26989274 45568000 15018 130560 0 2547504458 99.759 2013604666 19403 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-21 21:46:17] CVMFS is ok
[2025-07-21 21:46:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 21:46:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 21:46:17] Further information can be found at the LHC@home message board.
[2025-07-21 21:46:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 21:46:17] Checking for apptainer binary...
[2025-07-21 21:46:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 21:46:17] Running /usr/bin/apptainer --version
[2025-07-21 21:46:17] apptainer version 1.3.3-1.el9
[2025-07-21 21:46:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 21:46:17] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0012.triumf.lcg
[2025-07-21 21:46:17] apptainer works
[2025-07-21 21:46:17] Set ATHENA_PROC_NUMBER=8
[2025-07-21 21:46:17] Set ATHENA_CORE_NUMBER=8
[2025-07-21 21:46:17] Starting ATLAS job with PandaID=6741713213
[2025-07-21 21:46:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-21 21:51:26]  *** The last 200 lines of the pilot log: ***
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | wrong length of table data, x=[1753159680.0], y=[1545.0] (must be same and length>=4)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | ..............................
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . Timing measurements:
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . get job = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . initial setup = 4 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . payload setup = 15 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . stage-in = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . payload execution = 54 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . stage-out = 2 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . log creation = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | ..............................
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741713213/pilotlog.txt
[2025-07-21 21:51:26] 2025-07-22 04:50:52,592 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-21 21:51:26] - Log from pilotlog.txt -
[2025-07-21 21:51:26] 2025-07-22 04:50:52,536 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741713213/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,537 | INFO     | extracted standard info from prmon json
[2025-07-21 21:51:26] 2025-07-22 04:50:52,537 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 21:51:26] 2025-07-22 04:50:52,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | wrong length of table data, x=[1753159680.0], y=[1545.0] (must be same and length>=4)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | ..............................
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . Timing measurements:
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . get job = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . initial setup = 4 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . payload setup = 15 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . stage-in = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . payload execution = 54 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . stage-out = 2 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . log creation = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | ..............................
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741713213/pilotlog.txt
[2025-07-21 21:51:26] 2025-07-22 04:50:52,593 | WARNING  | 
[2025-07-21 21:51:26] [begin log extracts]
[2025-07-21 21:51:26] - Log from pilotlog.txt -
[2025-07-21 21:51:26] 2025-07-22 04:50:52,536 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741713213/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,537 | INFO     | extracted standard info from prmon json
[2025-07-21 21:51:26] 2025-07-22 04:50:52,537 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 21:51:26] 2025-07-22 04:50:52,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | WARNING  | wrong length of table data, x=[1753159680.0], y=[1545.0] (must be same and length>=4)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,538 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | ..............................
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . Timing measurements:
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . get job = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . initial setup = 4 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . payload setup = 15 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . stage-in = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . payload execution = 54 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . stage-out = 2 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | . log creation = 0 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | ..............................
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 21:51:26] 2025-07-22 04:50:52,539 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741713213/pilotlog.txt
[2025-07-21 21:51:26] [end log extracts]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,593 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,594 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-21 21:51:26] 2025-07-22 04:50:52,789 | INFO     | 
[2025-07-21 21:51:26] 2025-07-22 04:50:52,789 | INFO     | job summary report
[2025-07-21 21:51:26] 2025-07-22 04:50:52,789 | INFO     | --------------------------------------------------
[2025-07-21 21:51:26] 2025-07-22 04:50:52,789 | INFO     | PanDA job id: 6741713213
[2025-07-21 21:51:26] 2025-07-22 04:50:52,789 | INFO     | task id: 45697453
[2025-07-21 21:51:26] 2025-07-22 04:50:52,789 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-21 21:48:26,375 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-21 21:51:26] 2025-07-22 04:50:52,789 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-21 21:51:26] 2025-07-22 04:50:52,790 | INFO     | pilot state: failed 
[2025-07-21 21:51:26] 2025-07-22 04:50:52,790 | INFO     | transexitcode: 65
[2025-07-21 21:51:26] 2025-07-22 04:50:52,790 | INFO     | exeerrorcode: 65
[2025-07-21 21:51:26] 2025-07-22 04:50:52,790 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,790 | INFO     | exitcode: 65
[2025-07-21 21:51:26] 2025-07-22 04:50:52,806 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,806 | INFO     | cpuconsumptiontime: 17 s
[2025-07-21 21:51:26] 2025-07-22 04:50:52,806 | INFO     | nevents: 0
[2025-07-21 21:51:26] 2025-07-22 04:50:52,806 | INFO     | neventsw: 0
[2025-07-21 21:51:26] 2025-07-22 04:50:52,806 | INFO     | pid: 672873
[2025-07-21 21:51:26] 2025-07-22 04:50:52,806 | INFO     | pgrp: 672873
[2025-07-21 21:51:26] 2025-07-22 04:50:52,807 | INFO     | corecount: 8
[2025-07-21 21:51:26] 2025-07-22 04:50:52,807 | INFO     | event service: False
[2025-07-21 21:51:26] 2025-07-22 04:50:52,807 | INFO     | sizes: {0: 2397390, 1: 2397589, 12: 2397589, 14: 2397879, 23: 2397907, 74: 2421236, 75: 2421340, 79: 2425660, 80: 2425716, 210: 2425882}
[2025-07-21 21:51:26] 2025-07-22 04:50:52,807 | INFO     | --------------------------------------------------
[2025-07-21 21:51:26] 2025-07-22 04:50:52,807 | INFO     | 
[2025-07-21 21:51:26] 2025-07-22 04:50:52,807 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-21 21:51:26] 2025-07-22 04:50:52,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | job 6741713213 has completed (purged errors)
[2025-07-21 21:51:26] 2025-07-22 04:50:52,903 | INFO     | overall cleanup function is called
[2025-07-21 21:51:26] 2025-07-22 04:50:53,909 | INFO     | --- collectZombieJob: --- 10, [672873]
[2025-07-21 21:51:26] 2025-07-22 04:50:53,909 | INFO     | zombie collector waiting for pid 672873
[2025-07-21 21:51:26] 2025-07-22 04:50:53,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-21 21:51:26] 2025-07-22 04:50:53,909 | INFO     | collected zombie processes
[2025-07-21 21:51:26] 2025-07-22 04:50:53,909 | INFO     | will attempt to kill all subprocesses of pid=672873
[2025-07-21 21:51:26] 2025-07-22 04:50:54,696 | INFO     | process IDs to be killed: [672873] (in reverse order)
[2025-07-21 21:51:26] 2025-07-22 04:50:54,772 | WARNING  | found no corresponding commands to process id(s)
[2025-07-21 21:51:26] 2025-07-22 04:50:54,772 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-21 21:51:26] 2025-07-22 04:50:54,796 | INFO     | did not find any defunct processes belonging to 672873
[2025-07-21 21:51:26] 2025-07-22 04:50:54,825 | INFO     | did not find any defunct processes belonging to 672873
[2025-07-21 21:51:26] 2025-07-22 04:50:54,825 | INFO     | ready for new job
[2025-07-21 21:51:26] 2025-07-22 04:50:54,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-21 21:51:26] 2025-07-22 04:50:54,827 | INFO     | ***************************************
[2025-07-21 21:51:26] 2025-07-22 04:50:54,827 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-21 21:51:26] 2025-07-22 04:50:54,827 | INFO     | ***************************************
[2025-07-21 21:51:26] 2025-07-22 04:50:54,827 | INFO     | 
[2025-07-21 21:51:26] 2025-07-22 04:50:54,840 | INFO     | architecture information:
[2025-07-21 21:51:26] 2025-07-22 04:50:54,844 | INFO     | executing command: cat /etc/os-release
[2025-07-21 21:51:26] 2025-07-22 04:50:54,894 | INFO     | cat /etc/os-release:
[2025-07-21 21:51:26] NAME="CentOS Linux"
[2025-07-21 21:51:26] VERSION="7 (Core)"
[2025-07-21 21:51:26] ID="centos"
[2025-07-21 21:51:26] ID_LIKE="rhel fedora"
[2025-07-21 21:51:26] VERSION_ID="7"
[2025-07-21 21:51:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-21 21:51:26] ANSI_COLOR="0;31"
[2025-07-21 21:51:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-21 21:51:26] HOME_URL="https://www.centos.org/"
[2025-07-21 21:51:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-21 21:51:26] 
[2025-07-21 21:51:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-21 21:51:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-21 21:51:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-21 21:51:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-21 21:51:26] 
[2025-07-21 21:51:26] 2025-07-22 04:50:54,894 | INFO     | ***************************************
[2025-07-21 21:51:26] 2025-07-22 04:50:55,399 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-21 21:51:26] 2025-07-22 04:50:55,466 | INFO     | sufficient remaining disk space (1222396346368 B)
[2025-07-21 21:51:26] 2025-07-22 04:50:55,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-21 21:51:26] 2025-07-22 04:50:55,467 | INFO     | current server update state: UPDATING_FINAL
[2025-07-21 21:51:26] 2025-07-22 04:50:55,467 | INFO     | update_server=False
[2025-07-21 21:51:26] 2025-07-22 04:50:55,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-21 21:51:26] 2025-07-22 04:50:55,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-21 21:51:26] 2025-07-22 04:50:55,650 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-21 21:51:26] 2025-07-22 04:50:55,650 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-21 21:51:26] 2025-07-22 04:50:55,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-21 21:51:26] 2025-07-22 04:50:55,650 | INFO     | will abort loop
[2025-07-21 21:51:26] 2025-07-22 04:50:55,783 | INFO     | all data control threads have been joined
[2025-07-21 21:51:26] 2025-07-22 04:50:55,880 | INFO     | all payload control threads have been joined
[2025-07-21 21:51:26] 2025-07-22 04:50:56,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-21 21:51:26] 2025-07-22 04:50:56,267 | INFO     | all job control threads have been joined
[2025-07-21 21:51:26] 2025-07-22 04:50:56,475 | INFO     | [job] retrieve thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:56,483 | INFO     | [payload] validate_pre thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:56,656 | INFO     | [job] job monitor thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:56,789 | INFO     | [data] control thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:56,889 | INFO     | [payload] control thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:56,890 | INFO     | [payload] validate_post thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:57,273 | INFO     | [job] control thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:57,477 | INFO     | [data] copytool_out thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:57,587 | INFO     | [payload] failed_post thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:57,799 | INFO     | [job] create_data_payload thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:57,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-21 21:51:26] 2025-07-22 04:50:57,835 | INFO     | [job] validate thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:57,882 | INFO     | [data] copytool_in thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:57,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:57,899 | INFO     | [payload] execute_payloads thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:50:58,823 | INFO     | [job] queue monitor thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:51:00,076 | INFO     | [data] queue_monitor thread has finished
[2025-07-21 21:51:26] 2025-07-22 04:51:00,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672740300608)>', '<ExcThread(monitor, started 140671973316352)>']
[2025-07-21 21:51:26] 2025-07-22 04:51:05,550 | INFO     | all workflow threads have been joined
[2025-07-21 21:51:26] 2025-07-22 04:51:05,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-21 21:51:26] 2025-07-22 04:51:05,554 | INFO     | traces error code: 0
[2025-07-21 21:51:26] 2025-07-22 04:51:05,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-21 21:51:26] 2025-07-22 04:51:25,685 | INFO     | PID=660738 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-21 21:51:26] 2025-07-22 04:51:25,685 | INFO     | .. there are 33 such processes running
[2025-07-21 21:51:26] 2025-07-22 04:51:25,685 | INFO     | found 0 job(s) in 20 queues
[2025-07-21 21:51:26] 2025-07-22 04:51:25,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-21 21:51:26] 2025-07-22 04:51:25,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-21 21:51:26] 2025-07-22 04:51:25,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-21 21:51:26] 2025-07-22 04:51:25,686 | INFO     | [monitor] control thread has ended
[2025-07-21 21:51:26] 2025-07-22 04:51:26,062 [wrapper] ==== pilot stdout END ====
[2025-07-21 21:51:26] 2025-07-22 04:51:26,085 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-21 21:51:26] 2025-07-22 04:51:26,103 [wrapper] pilotpid: 660738
[2025-07-21 21:51:26] 2025-07-22 04:51:26,122 [wrapper] Pilot exit status: 0
[2025-07-21 21:51:26] 2025-07-22 04:51:26,229 [wrapper] pandaids: 6741713213
[2025-07-21 21:51:26] 2025-07-22 04:51:26,379 [wrapper] cleanup supervisor_pilot  660744 660739
[2025-07-21 21:51:26] 2025-07-22 04:51:26,381 [wrapper] Test setup, not cleaning
[2025-07-21 21:51:26] 2025-07-22 04:51:26,383 [wrapper] apfmon messages muted
[2025-07-21 21:51:26] 2025-07-22 04:51:26,384 [wrapper] ==== wrapper stdout END ====
[2025-07-21 21:51:26] 2025-07-22 04:51:26,386 [wrapper] ==== wrapper stderr END ====
[2025-07-21 21:51:26]  *** Error codes and diagnostics ***
[2025-07-21 21:51:26]     "exeErrorCode": 65,
[2025-07-21 21:51:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 21:51:26]     "pilotErrorCode": 1305,
[2025-07-21 21:51:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 21:51:26]  *** Listing of results directory ***
[2025-07-21 21:51:26] total 317348
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc      5112 Jul 21 19:46 queuedata.json
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc    530466 Jul 21 19:46 pilot3.tar.gz
[2025-07-21 21:51:26] -rwx------. 1 boinc boinc     36292 Jul 21 19:47 runpilot2-wrapper.sh
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc       100 Jul 21 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-21 21:51:26] -rwxr-xr-x. 1 boinc boinc      7986 Jul 21 21:46 run_atlas
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc       105 Jul 21 21:46 job.xml
[2025-07-21 21:51:26] -rw-r--r--. 2 boinc boinc 320886913 Jul 21 21:46 EVNT.45697451._000149.pool.root.1
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc      6449 Jul 21 21:46 init_data.xml
[2025-07-21 21:51:26] -rw-r--r--. 2 boinc boinc     15095 Jul 21 21:46 start_atlas.sh
[2025-07-21 21:51:26] drwxrwx--x. 2 boinc boinc      4096 Jul 21 21:46 shared
[2025-07-21 21:51:26] -rw-r--r--. 2 boinc boinc    542903 Jul 21 21:46 input.tar.gz
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc         0 Jul 21 21:46 boinc_lockfile
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc      2634 Jul 21 21:46 pandaJob.out
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc    977326 Jul 21 21:46 agis_schedconf.cvmfs.json
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc   1593055 Jul 21 21:46 agis_ddmendpoints.agis.ALL.json
[2025-07-21 21:51:26] drwx------. 4 boinc boinc      4096 Jul 21 21:46 pilot3
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc       525 Jul 21 21:48 boinc_task_state.xml
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc       954 Jul 21 21:48 memory_monitor_summary.json
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc     21567 Jul 21 21:48 log.45697453._003719.job.log.tgz.1
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc        95 Jul 21 21:50 pilot_heartbeat.json
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc      8374 Jul 21 21:50 heartbeat.json
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc      8192 Jul 21 21:51 boinc_mmap_file
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc        23 Jul 21 21:51 wrapper_checkpoint.txt
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc       822 Jul 21 21:51 pilotlog.txt
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc     81011 Jul 21 21:51 log.45697453._003719.job.log.1
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc       188 Jul 21 21:51 output.list
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc       620 Jul 21 21:51 runtime_log
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc    122880 Jul 21 21:51 result.tar.gz
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc       645 Jul 21 21:51 ubVKDmbDIy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY6HLDmzSenbm.diag
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc      8648 Jul 21 21:51 runtime_log.err
[2025-07-21 21:51:26] -rw-r--r--. 1 boinc boinc     22004 Jul 21 21:51 stderr.txt
[2025-07-21 21:51:26] No HITS result produced
[2025-07-21 21:51:26]  *** Contents of shared directory: ***
[2025-07-21 21:51:26] total 314040
[2025-07-21 21:51:26] -rw-r--r--. 2 boinc boinc 320886913 Jul 21 21:46 ATLAS.root_0
[2025-07-21 21:51:26] -rw-r--r--. 2 boinc boinc     15095 Jul 21 21:46 start_atlas.sh
[2025-07-21 21:51:26] -rw-r--r--. 2 boinc boinc    542903 Jul 21 21:46 input.tar.gz
[2025-07-21 21:51:26] -rw-------. 1 boinc boinc    122880 Jul 21 21:51 result.tar.gz
21:51:27 (655429): run_atlas exited; CPU time 27.444786
21:51:27 (655429): called boinc_finish(0)

</stderr_txt>
]]>

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