Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
12:17:06 (1313353): wrapper (7.7.26015): starting
12:17:06 (1313353): wrapper: running run_atlas (--nthreads 3)
[2025-07-22 12:17:06] Arguments: --nthreads 3
[2025-07-22 12:17:06] Threads: 3
[2025-07-22 12:17:06] Checking for CVMFS
[2025-07-22 12:17:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 12:17:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 12:17:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 12:17:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 12:17:07] 2.12.7.0 1143464 287 51236 148618 1 57 3664825 6144000 2751 130560 0 476648 99.991 13491 2931 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-22 12:17:07] CVMFS is ok
[2025-07-22 12:17:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 12:17:07] Checking for apptainer binary...
[2025-07-22 12:17:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 12:17:07] Running /usr/bin/apptainer --version
[2025-07-22 12:17:07] apptainer version 1.4.1
[2025-07-22 12:17:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 12:17:07] Ryzen5
[2025-07-22 12:17:07] apptainer works
[2025-07-22 12:17:07] Set ATHENA_PROC_NUMBER=3
[2025-07-22 12:17:07] Set ATHENA_CORE_NUMBER=3
[2025-07-22 12:17:07] Starting ATLAS job with PandaID=6741709510
[2025-07-22 12:17:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 15:48:06]  *** The last 200 lines of the pilot log: ***
[2025-07-22 15:48:06] 2025-07-22 13:47:42,774 | INFO     | executing command: lscpu
[2025-07-22 15:48:06] 2025-07-22 13:47:42,795 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-22 15:48:06] 2025-07-22 13:47:44,201 | INFO     | monitor loop #949: job 0:6741709510 is in state 'finished'
[2025-07-22 15:48:06] 2025-07-22 13:47:44,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,661 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 15:48:06] 2025-07-22 13:47:46,666 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3939.9306875
[2025-07-22 15:48:06] 2025-07-22 13:47:46,668 | INFO     | using path: /var/lib/boinc/boinc/slots/2/PanDA_Pilot-6741709510/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,668 | INFO     | extracted standard info from prmon json
[2025-07-22 15:48:06] 2025-07-22 13:47:46,669 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 15:48:06] 2025-07-22 13:47:46,669 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 15:48:06] 2025-07-22 13:47:46,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 15:48:06] 2025-07-22 13:47:46,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 15:48:06] 2025-07-22 13:47:46,672 | INFO     | fitting pss+swap vs Time
[2025-07-22 15:48:06] 2025-07-22 13:47:46,672 | INFO     | sum of square deviations: 2750295288.0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,673 | INFO     | sum of deviations: -64547317689.000015
[2025-07-22 15:48:06] 2025-07-22 13:47:46,673 | INFO     | mean x: 1753185739.0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,673 | INFO     | mean y: 2403446.541062802
[2025-07-22 15:48:06] 2025-07-22 13:47:46,673 | INFO     | -- intersect: 41148325979.589905
[2025-07-22 15:48:06] 2025-07-22 13:47:46,673 | INFO     | intersect: 41148325979.589905
[2025-07-22 15:48:06] 2025-07-22 13:47:46,674 | INFO     | chi2: 1.4997537002437429
[2025-07-22 15:48:06] 2025-07-22 13:47:46,674 | INFO     | sum of square deviations: 2555770710.5
[2025-07-22 15:48:06] 2025-07-22 13:47:46,675 | INFO     | sum of deviations: -62669376141.99998
[2025-07-22 15:48:06] 2025-07-22 13:47:46,675 | INFO     | mean x: 1753185586.5
[2025-07-22 15:48:06] 2025-07-22 13:47:46,675 | INFO     | mean y: 2404919.0495049506
[2025-07-22 15:48:06] 2025-07-22 13:47:46,675 | INFO     | -- intersect: 42991803974.180954
[2025-07-22 15:48:06] 2025-07-22 13:47:46,675 | INFO     | intersect: 42991803974.180954
[2025-07-22 15:48:06] 2025-07-22 13:47:46,675 | INFO     | chi2: 1.4888268226047945
[2025-07-22 15:48:06] 2025-07-22 13:47:46,676 | INFO     | current chi2=1.4888268226047945 (change=0.7285781416756991 %)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,676 | INFO     | right removable region: 201
[2025-07-22 15:48:06] 2025-07-22 13:47:46,676 | INFO     | sum of square deviations: 2555770710.5
[2025-07-22 15:48:06] 2025-07-22 13:47:46,677 | INFO     | sum of deviations: -79452882012.5
[2025-07-22 15:48:06] 2025-07-22 13:47:46,677 | INFO     | mean x: 1753185891.5
[2025-07-22 15:48:06] 2025-07-22 13:47:46,677 | INFO     | mean y: 2414859.8168316833
[2025-07-22 15:48:06] 2025-07-22 13:47:46,677 | INFO     | -- intersect: 54504828245.74922
[2025-07-22 15:48:06] 2025-07-22 13:47:46,677 | INFO     | intersect: 54504828245.74922
[2025-07-22 15:48:06] 2025-07-22 13:47:46,677 | INFO     | chi2: 0.43401071283560183
[2025-07-22 15:48:06] 2025-07-22 13:47:46,677 | INFO     | current chi2=0.43401071283560183 (change=71.06120073148907 %)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,678 | INFO     | sum of square deviations: 2370641658.0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,678 | INFO     | sum of deviations: -71362652122.99997
[2025-07-22 15:48:06] 2025-07-22 13:47:46,679 | INFO     | mean x: 1753186044.0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,679 | INFO     | mean y: 2408191.5228426396
[2025-07-22 15:48:06] 2025-07-22 13:47:46,679 | INFO     | -- intersect: 52777995485.64881
[2025-07-22 15:48:06] 2025-07-22 13:47:46,679 | INFO     | intersect: 52777995485.64881
[2025-07-22 15:48:06] 2025-07-22 13:47:46,679 | INFO     | chi2: 0.42907151664143867
[2025-07-22 15:48:06] 2025-07-22 13:47:46,679 | INFO     | current chi2=0.42907151664143867 (change=1.138035547992124 %)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,679 | INFO     | left removable region: 20
[2025-07-22 15:48:06] 2025-07-22 13:47:46,679 | INFO     | sum of square deviations: 1838657730.0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,680 | INFO     | sum of deviations: -51743441479.00001
[2025-07-22 15:48:06] 2025-07-22 13:47:46,680 | INFO     | mean x: 1753186166.0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,680 | INFO     | mean y: 2393791.635359116
[2025-07-22 15:48:06] 2025-07-22 13:47:46,680 | INFO     | -- intersect: 49340497508.31426
[2025-07-22 15:48:06] 2025-07-22 13:47:46,680 | INFO     | intersect: 49340497508.31426
[2025-07-22 15:48:06] 2025-07-22 13:47:46,681 | INFO     | chi2: 0.38784500461003923
[2025-07-22 15:48:06] 2025-07-22 13:47:46,681 | INFO     | -- intersect: 49340497508.31426
[2025-07-22 15:48:06] 2025-07-22 13:47:46,681 | INFO     | current memory leak: -28.14 B/s (using 181 data points, chi2=0.39)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,681 | INFO     | could have reported an average CPU frequency of 3904 MHz (10 samples)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,681 | INFO     | ..............................
[2025-07-22 15:48:06] 2025-07-22 13:47:46,681 | INFO     | . Timing measurements:
[2025-07-22 15:48:06] 2025-07-22 13:47:46,681 | INFO     | . get job = 0 s
[2025-07-22 15:48:06] 2025-07-22 13:47:46,682 | INFO     | . initial setup = 1 s
[2025-07-22 15:48:06] 2025-07-22 13:47:46,682 | INFO     | . payload setup = 5 s
[2025-07-22 15:48:06] 2025-07-22 13:47:46,682 | INFO     | . stage-in = 0 s
[2025-07-22 15:48:06] 2025-07-22 13:47:46,682 | INFO     | . payload execution = 12603 s
[2025-07-22 15:48:06] 2025-07-22 13:47:46,682 | INFO     | . stage-out = 0 s
[2025-07-22 15:48:06] 2025-07-22 13:47:46,682 | INFO     | . log creation = 0 s
[2025-07-22 15:48:06] 2025-07-22 13:47:46,682 | INFO     | ..............................
[2025-07-22 15:48:06] 2025-07-22 13:47:46,755 | INFO     | 
[2025-07-22 15:48:06] 2025-07-22 13:47:46,755 | INFO     | job summary report
[2025-07-22 15:48:06] 2025-07-22 13:47:46,755 | INFO     | --------------------------------------------------
[2025-07-22 15:48:06] 2025-07-22 13:47:46,755 | INFO     | PanDA job id: 6741709510
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | task id: 45697453
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | errors: (none)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | pilot state: finished 
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | transexitcode: 0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | exeerrorcode: 0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | exeerrordiag: 
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | exitcode: 0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | exitmsg: OK
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | cpuconsumptiontime: 37014 s
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | nevents: 400
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | neventsw: 0
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | pid: 1323630
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | pgrp: 1323630
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | corecount: 3
[2025-07-22 15:48:06] 2025-07-22 13:47:46,756 | INFO     | event service: False
[2025-07-22 15:48:06] 2025-07-22 13:47:46,757 | INFO     | sizes: {0: 2397556, 3: 2397818, 11: 2397846, 12612: 2436951, 12613: 2436951, 12619: 2437145}
[2025-07-22 15:48:06] 2025-07-22 13:47:46,757 | INFO     | --------------------------------------------------
[2025-07-22 15:48:06] 2025-07-22 13:47:46,757 | INFO     | 
[2025-07-22 15:48:06] 2025-07-22 13:47:46,757 | INFO     | executing command: ls -lF /var/lib/boinc/boinc/slots/2
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | job 6741709510 has completed (purged errors)
[2025-07-22 15:48:06] 2025-07-22 13:47:46,775 | INFO     | overall cleanup function is called
[2025-07-22 15:48:06] 2025-07-22 13:47:47,782 | INFO     | --- collectZombieJob: --- 10, [1323630]
[2025-07-22 15:48:06] 2025-07-22 13:47:47,783 | INFO     | zombie collector waiting for pid 1323630
[2025-07-22 15:48:06] 2025-07-22 13:47:47,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 15:48:06] 2025-07-22 13:47:47,783 | INFO     | collected zombie processes
[2025-07-22 15:48:06] 2025-07-22 13:47:47,783 | INFO     | will attempt to kill all subprocesses of pid=1323630
[2025-07-22 15:48:06] 2025-07-22 13:47:47,905 | INFO     | process IDs to be killed: [1323630] (in reverse order)
[2025-07-22 15:48:06] 2025-07-22 13:47:47,958 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 15:48:06] 2025-07-22 13:47:47,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 15:48:06] 2025-07-22 13:47:47,962 | INFO     | did not find any defunct processes belonging to 1323630
[2025-07-22 15:48:06] 2025-07-22 13:47:47,965 | INFO     | did not find any defunct processes belonging to 1323630
[2025-07-22 15:48:06] 2025-07-22 13:47:47,965 | INFO     | ready for new job
[2025-07-22 15:48:06] 2025-07-22 13:47:47,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 15:48:06] 2025-07-22 13:47:47,967 | INFO     | ***************************************
[2025-07-22 15:48:06] 2025-07-22 13:47:47,967 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 15:48:06] 2025-07-22 13:47:47,967 | INFO     | ***************************************
[2025-07-22 15:48:06] 2025-07-22 13:47:47,967 | INFO     | 
[2025-07-22 15:48:06] 2025-07-22 13:47:47,968 | INFO     | architecture information:
[2025-07-22 15:48:06] 2025-07-22 13:47:47,968 | INFO     | executing command: cat /etc/os-release
[2025-07-22 15:48:06] 2025-07-22 13:47:47,983 | INFO     | cat /etc/os-release:
[2025-07-22 15:48:06] NAME="CentOS Linux"
[2025-07-22 15:48:06] VERSION="7 (Core)"
[2025-07-22 15:48:06] ID="centos"
[2025-07-22 15:48:06] ID_LIKE="rhel fedora"
[2025-07-22 15:48:06] VERSION_ID="7"
[2025-07-22 15:48:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 15:48:06] ANSI_COLOR="0;31"
[2025-07-22 15:48:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 15:48:06] HOME_URL="https://www.centos.org/"
[2025-07-22 15:48:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 15:48:06] 
[2025-07-22 15:48:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 15:48:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 15:48:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 15:48:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 15:48:06] 
[2025-07-22 15:48:06] 2025-07-22 13:47:47,983 | INFO     | ***************************************
[2025-07-22 15:48:06] 2025-07-22 13:47:48,486 | INFO     | executing command: df -mP /var/lib/boinc/boinc/slots/2
[2025-07-22 15:48:06] 2025-07-22 13:47:48,498 | INFO     | sufficient remaining disk space (391400914944 B)
[2025-07-22 15:48:06] 2025-07-22 13:47:48,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 15:48:06] 2025-07-22 13:47:48,498 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 15:48:06] 2025-07-22 13:47:48,498 | INFO     | update_server=False
[2025-07-22 15:48:06] 2025-07-22 13:47:48,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 15:48:06] 2025-07-22 13:47:48,499 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-22 15:48:06] 2025-07-22 13:47:48,499 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 15:48:06] 2025-07-22 13:47:48,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 15:48:06] 2025-07-22 13:47:48,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 15:48:06] 2025-07-22 13:47:48,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 15:48:06] 2025-07-22 13:47:48,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 15:48:06] 2025-07-22 13:47:48,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 15:48:06] 2025-07-22 13:47:48,499 | INFO     | aborting loop
[2025-07-22 15:48:06] 2025-07-22 13:47:48,853 | INFO     | all payload control threads have been joined
[2025-07-22 15:48:06] 2025-07-22 13:47:48,881 | INFO     | all data control threads have been joined
[2025-07-22 15:48:06] 2025-07-22 13:47:49,005 | INFO     | all job control threads have been joined
[2025-07-22 15:48:06] 2025-07-22 13:47:49,504 | INFO     | [job] retrieve thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:49,505 | INFO     | [job] queue monitor thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:49,505 | INFO     | [job] job monitor thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:49,626 | INFO     | [data] copytool_in thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:49,655 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:49,858 | INFO     | [payload] control thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:49,886 | INFO     | [data] control thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:50,010 | INFO     | [job] control thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:50,127 | INFO     | [payload] validate_post thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:50,505 | INFO     | [data] copytool_out thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:50,599 | INFO     | [job] validate thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:50,971 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:50,978 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:51,086 | INFO     | [payload] failed_post thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:51,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 15:48:06] 2025-07-22 13:47:55,747 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:47:59,143 | INFO     | job.realtimelogging is not enabled
[2025-07-22 15:48:06] 2025-07-22 13:48:00,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 15:48:06] 2025-07-22 13:48:01,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269764724544)>', '<ExcThread(monitor, started 140269483689728)>']
[2025-07-22 15:48:06] 2025-07-22 13:48:01,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 15:48:06] 2025-07-22 13:48:01,562 | INFO     | [monitor] control thread has ended
[2025-07-22 15:48:06] 2025-07-22 13:48:06,126 | INFO     | all workflow threads have been joined
[2025-07-22 15:48:06] 2025-07-22 13:48:06,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 15:48:06] 2025-07-22 13:48:06,127 | INFO     | traces error code: 0
[2025-07-22 15:48:06] 2025-07-22 13:48:06,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 15:48:06] 2025-07-22 13:48:06,217 [wrapper] ==== pilot stdout END ====
[2025-07-22 15:48:06] 2025-07-22 13:48:06,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 15:48:06] 2025-07-22 13:48:06,224 [wrapper] pilotpid: 1317044
[2025-07-22 15:48:06] 2025-07-22 13:48:06,225 [wrapper] Pilot exit status: 0
[2025-07-22 15:48:06] 2025-07-22 13:48:06,233 [wrapper] pandaids: 6741709510
[2025-07-22 15:48:06] 2025-07-22 13:48:06,262 [wrapper] cleanup supervisor_pilot 1446943 1317045
[2025-07-22 15:48:06] 2025-07-22 13:48:06,264 [wrapper] Test setup, not cleaning
[2025-07-22 15:48:06] 2025-07-22 13:48:06,266 [wrapper] apfmon messages muted
[2025-07-22 15:48:06] 2025-07-22 13:48:06,268 [wrapper] ==== wrapper stdout END ====
[2025-07-22 15:48:06] 2025-07-22 13:48:06,269 [wrapper] ==== wrapper stderr END ====
[2025-07-22 15:48:06]  *** Error codes and diagnostics ***
[2025-07-22 15:48:06]     "exeErrorCode": 0,
[2025-07-22 15:48:06]     "exeErrorDiag": "",
[2025-07-22 15:48:06]     "pilotErrorCode": 0,
[2025-07-22 15:48:06]     "pilotErrorDiag": "",
[2025-07-22 15:48:06]  *** Listing of results directory ***
[2025-07-22 15:48:06] insgesamt 565768
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc    530466 22. Jul 02:28 pilot3.tar.gz
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc      5112 22. Jul 02:32 queuedata.json
[2025-07-22 15:48:06] -rwx------ 1 boinc boinc     36292 22. Jul 02:33 runpilot2-wrapper.sh
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc       100 22. Jul 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 15:48:06] -rwxr-xr-x 1 boinc boinc      7986 22. Jul 12:17 run_atlas
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc       105 22. Jul 12:17 job.xml
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc      6977 22. Jul 12:17 init_data.xml
[2025-07-22 15:48:06] -rw-r--r-- 2 boinc boinc 314641499 22. Jul 12:17 EVNT.45697451._000052.pool.root.1
[2025-07-22 15:48:06] -rw-r--r-- 2 boinc boinc     15095 22. Jul 12:17 start_atlas.sh
[2025-07-22 15:48:06] drwxrwx--x 2 boinc boinc      4096 22. Jul 12:17 shared
[2025-07-22 15:48:06] -rw-r--r-- 2 boinc boinc    542904 22. Jul 12:17 input.tar.gz
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc         0 22. Jul 12:17 boinc_lockfile
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc      2633 22. Jul 12:17 pandaJob.out
[2025-07-22 15:48:06] -rw------- 1 boinc boinc    976654 22. Jul 12:17 agis_schedconf.cvmfs.json
[2025-07-22 15:48:06] drwx------ 4 boinc boinc      4096 22. Jul 12:17 pilot3
[2025-07-22 15:48:06] -rw------- 1 boinc boinc        95 22. Jul 15:47 pilot_heartbeat.json
[2025-07-22 15:48:06] -rw------- 1 boinc boinc 257841597 22. Jul 15:47 HITS.45697453._001280.pool.root.1
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc       531 22. Jul 15:47 boinc_task_state.xml
[2025-07-22 15:48:06] -rw------- 1 boinc boinc      1017 22. Jul 15:47 memory_monitor_summary.json
[2025-07-22 15:48:06] -rw------- 1 boinc boinc   1593031 22. Jul 15:47 agis_ddmendpoints.agis.ALL.json
[2025-07-22 15:48:06] -rw------- 1 boinc boinc    293203 22. Jul 15:47 log.45697453._001280.job.log.tgz.1
[2025-07-22 15:48:06] -rw------- 1 boinc boinc      7728 22. Jul 15:47 heartbeat.json
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc      8192 22. Jul 15:48 boinc_mmap_file
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc        28 22. Jul 15:48 wrapper_checkpoint.txt
[2025-07-22 15:48:06] -rw------- 1 boinc boinc      4559 22. Jul 15:48 pilotlog.txt
[2025-07-22 15:48:06] -rw------- 1 boinc boinc   1200042 22. Jul 15:48 log.45697453._001280.job.log.1
[2025-07-22 15:48:06] -rw------- 1 boinc boinc       357 22. Jul 15:48 output.list
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc       620 22. Jul 15:48 runtime_log
[2025-07-22 15:48:06] -rw------- 1 boinc boinc   1515520 22. Jul 15:48 result.tar.gz
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc      8697 22. Jul 15:48 runtime_log.err
[2025-07-22 15:48:06] -rw------- 1 boinc boinc       648 22. Jul 15:48 NreMDmU7Fy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyaHLDmwZkLrn.diag
[2025-07-22 15:48:06] -rw-r--r-- 1 boinc boinc     20816 22. Jul 15:48 stderr.txt
[2025-07-22 15:48:06] HITS file was successfully produced:
[2025-07-22 15:48:06] -rw------- 1 boinc boinc 257841597 22. Jul 15:47 shared/HITS.pool.root.1
[2025-07-22 15:48:06]  *** Contents of shared directory: ***
[2025-07-22 15:48:06] insgesamt 561104
[2025-07-22 15:48:06] -rw-r--r-- 2 boinc boinc 314641499 22. Jul 12:17 ATLAS.root_0
[2025-07-22 15:48:06] -rw-r--r-- 2 boinc boinc     15095 22. Jul 12:17 start_atlas.sh
[2025-07-22 15:48:06] -rw-r--r-- 2 boinc boinc    542904 22. Jul 12:17 input.tar.gz
[2025-07-22 15:48:06] -rw------- 1 boinc boinc 257841597 22. Jul 15:47 HITS.pool.root.1
[2025-07-22 15:48:06] -rw------- 1 boinc boinc   1515520 22. Jul 15:48 result.tar.gz
15:48:07 (1313353): run_atlas exited; CPU time 37183.662181
15:48:07 (1313353): called boinc_finish(0)

</stderr_txt>
]]>

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