Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:28:12 (4098221): wrapper (7.7.26015): starting
23:28:12 (4098221): wrapper: running run_atlas (--nthreads 10)
[2025-07-21 23:28:12] Arguments: --nthreads 10
[2025-07-21 23:28:12] Threads: 10
[2025-07-21 23:28:12] Checking for CVMFS
[2025-07-21 23:28:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 23:28:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 23:28:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 23:28:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 23:28:13] 2.12.6.0 4120630 10642 283984 148607 0 455 28817227 32935937 14887 16776704 0 37441277 99.549 49418545 29420 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-21 23:28:13] CVMFS is ok
[2025-07-21 23:28:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 23:28:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 23:28:13] Further information can be found at the LHC@home message board.
[2025-07-21 23:28:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 23:28:13] Checking for apptainer binary...
[2025-07-21 23:28:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 23:28:13] Running /usr/bin/apptainer --version
[2025-07-21 23:28:13] apptainer version 1.4.1-1.el9
[2025-07-21 23:28:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 23:28:14] c-5-4.aglt2.org
[2025-07-21 23:28:14] apptainer works
[2025-07-21 23:28:14] Set ATHENA_PROC_NUMBER=10
[2025-07-21 23:28:14] Set ATHENA_CORE_NUMBER=10
[2025-07-21 23:28:14] Starting ATLAS job with PandaID=6741825685
[2025-07-21 23:28:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 06:32:27]  *** The last 200 lines of the pilot log: ***
[2025-07-22 06:32:27] 2025-07-22 10:31:53,531 | INFO     | monitor loop #1456: job 0:6741825685 is in state 'finished'
[2025-07-22 06:32:27] 2025-07-22 10:31:53,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,601 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 06:32:27] 2025-07-22 10:31:53,608 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2639.972825
[2025-07-22 06:32:27] 2025-07-22 10:31:53,627 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741825685/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,628 | INFO     | extracted standard info from prmon json
[2025-07-22 06:32:27] 2025-07-22 10:31:53,628 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 06:32:27] 2025-07-22 10:31:53,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 06:32:27] 2025-07-22 10:31:53,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 06:32:27] 2025-07-22 10:31:53,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 06:32:27] 2025-07-22 10:31:53,637 | INFO     | fitting pss+swap vs Time
[2025-07-22 06:32:27] 2025-07-22 10:31:53,638 | INFO     | sum of square deviations: 22323392604.978363
[2025-07-22 06:32:27] 2025-07-22 10:31:53,642 | INFO     | sum of deviations: 2566047626.908638
[2025-07-22 06:32:27] 2025-07-22 10:31:53,643 | INFO     | mean x: 1753167635.0697114
[2025-07-22 06:32:27] 2025-07-22 10:31:53,643 | INFO     | mean y: 2305383.0721153845
[2025-07-22 06:32:27] 2025-07-22 10:31:53,643 | INFO     | -- intersect: -199219166.94365594
[2025-07-22 06:32:27] 2025-07-22 10:31:53,643 | INFO     | intersect: -199219166.94365594
[2025-07-22 06:32:27] 2025-07-22 10:31:53,644 | INFO     | chi2: 3.1765962413037285
[2025-07-22 06:32:27] 2025-07-22 10:31:53,644 | INFO     | sum of square deviations: 21528175558.335808
[2025-07-22 06:32:27] 2025-07-22 10:31:53,649 | INFO     | sum of deviations: 29340288169.605843
[2025-07-22 06:32:27] 2025-07-22 10:31:53,649 | INFO     | mean x: 1753167482.5766423
[2025-07-22 06:32:27] 2025-07-22 10:31:53,649 | INFO     | mean y: 2310473.583941606
[2025-07-22 06:32:27] 2025-07-22 10:31:53,649 | INFO     | -- intersect: -2387043840.672564
[2025-07-22 06:32:27] 2025-07-22 10:31:53,649 | INFO     | intersect: -2387043840.672564
[2025-07-22 06:32:27] 2025-07-22 10:31:53,650 | INFO     | chi2: 2.5242712194489725
[2025-07-22 06:32:27] 2025-07-22 10:31:53,650 | INFO     | current chi2=2.5242712194489725 (change=20.535345769565946 %)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,650 | INFO     | right removable region: 410
[2025-07-22 06:32:27] 2025-07-22 10:31:53,651 | INFO     | sum of square deviations: 21528030988.335823
[2025-07-22 06:32:27] 2025-07-22 10:31:53,655 | INFO     | sum of deviations: -76143321692.21906
[2025-07-22 06:32:27] 2025-07-22 10:31:53,655 | INFO     | mean x: 1753167787.5766423
[2025-07-22 06:32:27] 2025-07-22 10:31:53,655 | INFO     | mean y: 2320429.435523114
[2025-07-22 06:32:27] 2025-07-22 10:31:53,656 | INFO     | -- intersect: 6203167079.192391
[2025-07-22 06:32:27] 2025-07-22 10:31:53,656 | INFO     | intersect: 6203167079.192391
[2025-07-22 06:32:27] 2025-07-22 10:31:53,656 | INFO     | chi2: 1.3207988366935333
[2025-07-22 06:32:27] 2025-07-22 10:31:53,657 | INFO     | current chi2=1.3207988366935333 (change=58.4209406433266 %)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,657 | INFO     | sum of square deviations: 20751811324.317844
[2025-07-22 06:32:27] 2025-07-22 10:31:53,661 | INFO     | sum of deviations: -96547817842.01233
[2025-07-22 06:32:27] 2025-07-22 10:31:53,662 | INFO     | mean x: 1753167940.0812807
[2025-07-22 06:32:27] 2025-07-22 10:31:53,662 | INFO     | mean y: 2324429.4852216747
[2025-07-22 06:32:27] 2025-07-22 10:31:53,662 | INFO     | -- intersect: 8158939593.341891
[2025-07-22 06:32:27] 2025-07-22 10:31:53,662 | INFO     | intersect: 8158939593.341891
[2025-07-22 06:32:27] 2025-07-22 10:31:53,663 | INFO     | chi2: 1.178879358041029
[2025-07-22 06:32:27] 2025-07-22 10:31:53,663 | INFO     | current chi2=1.178879358041029 (change=10.744973020099197 %)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,663 | INFO     | left removable region: 20
[2025-07-22 06:32:27] 2025-07-22 10:31:53,664 | INFO     | sum of square deviations: 18393876997.03584
[2025-07-22 06:32:27] 2025-07-22 10:31:53,667 | INFO     | sum of deviations: -44610565823.23082
[2025-07-22 06:32:27] 2025-07-22 10:31:53,667 | INFO     | mean x: 1753168062.0871794
[2025-07-22 06:32:27] 2025-07-22 10:31:53,668 | INFO     | mean y: 2324716.653846154
[2025-07-22 06:32:27] 2025-07-22 10:31:53,668 | INFO     | -- intersect: 4254273299.626843
[2025-07-22 06:32:27] 2025-07-22 10:31:53,668 | INFO     | intersect: 4254273299.626843
[2025-07-22 06:32:27] 2025-07-22 10:31:53,669 | INFO     | chi2: 0.4554542992354453
[2025-07-22 06:32:27] 2025-07-22 10:31:53,669 | INFO     | -- intersect: 4254273299.626843
[2025-07-22 06:32:27] 2025-07-22 10:31:53,669 | INFO     | current memory leak: -2.43 B/s (using 390 data points, chi2=0.46)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,670 | INFO     | could have reported an average CPU frequency of 2605 MHz (17 samples)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,670 | INFO     | ..............................
[2025-07-22 06:32:27] 2025-07-22 10:31:53,670 | INFO     | . Timing measurements:
[2025-07-22 06:32:27] 2025-07-22 10:31:53,670 | INFO     | . get job = 0 s
[2025-07-22 06:32:27] 2025-07-22 10:31:53,670 | INFO     | . initial setup = 4 s
[2025-07-22 06:32:27] 2025-07-22 10:31:53,670 | INFO     | . payload setup = 14 s
[2025-07-22 06:32:27] 2025-07-22 10:31:53,670 | INFO     | . stage-in = 0 s
[2025-07-22 06:32:27] 2025-07-22 10:31:53,671 | INFO     | . payload execution = 25333 s
[2025-07-22 06:32:27] 2025-07-22 10:31:53,671 | INFO     | . stage-out = 3 s
[2025-07-22 06:32:27] 2025-07-22 10:31:53,671 | INFO     | . log creation = 0 s
[2025-07-22 06:32:27] 2025-07-22 10:31:53,671 | INFO     | ..............................
[2025-07-22 06:32:27] 2025-07-22 10:31:53,779 | INFO     | 
[2025-07-22 06:32:27] 2025-07-22 10:31:53,780 | INFO     | job summary report
[2025-07-22 06:32:27] 2025-07-22 10:31:53,780 | INFO     | --------------------------------------------------
[2025-07-22 06:32:27] 2025-07-22 10:31:53,780 | INFO     | PanDA job id: 6741825685
[2025-07-22 06:32:27] 2025-07-22 10:31:53,780 | INFO     | task id: 45697532
[2025-07-22 06:32:27] 2025-07-22 10:31:53,780 | INFO     | errors: (none)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 06:32:27] 2025-07-22 10:31:53,780 | INFO     | pilot state: finished 
[2025-07-22 06:32:27] 2025-07-22 10:31:53,780 | INFO     | transexitcode: 0
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | exeerrorcode: 0
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | exeerrordiag: 
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | exitcode: 0
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | exitmsg: OK
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | cpuconsumptiontime: 73343 s
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | nevents: 400
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | neventsw: 0
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | pid: 4112127
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | pgrp: 4112127
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | corecount: 10
[2025-07-22 06:32:27] 2025-07-22 10:31:53,781 | INFO     | event service: False
[2025-07-22 06:32:27] 2025-07-22 10:31:53,782 | INFO     | sizes: {0: 2397546, 1: 2397546, 9: 2397836, 12: 2397864, 25352: 2433113, 25357: 2442099, 25358: 2442283, 25368: 2442541}
[2025-07-22 06:32:27] 2025-07-22 10:31:53,782 | INFO     | --------------------------------------------------
[2025-07-22 06:32:27] 2025-07-22 10:31:53,782 | INFO     | 
[2025-07-22 06:32:27] 2025-07-22 10:31:53,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 06:32:27] 2025-07-22 10:31:53,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,801 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,801 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,803 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 06:32:27] 2025-07-22 10:31:53,803 | INFO     | job 6741825685 has completed (purged errors)
[2025-07-22 06:32:27] 2025-07-22 10:31:53,804 | INFO     | overall cleanup function is called
[2025-07-22 06:32:27] 2025-07-22 10:31:54,530 | INFO     | PID=4102210 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-22 06:32:27] 2025-07-22 10:31:54,530 | INFO     | .. there are 33 such processes running
[2025-07-22 06:32:27] 2025-07-22 10:31:54,812 | INFO     | --- collectZombieJob: --- 10, [4112127]
[2025-07-22 06:32:27] 2025-07-22 10:31:54,813 | INFO     | zombie collector waiting for pid 4112127
[2025-07-22 06:32:27] 2025-07-22 10:31:54,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 06:32:27] 2025-07-22 10:31:54,813 | INFO     | collected zombie processes
[2025-07-22 06:32:27] 2025-07-22 10:31:54,813 | INFO     | will attempt to kill all subprocesses of pid=4112127
[2025-07-22 06:32:27] 2025-07-22 10:31:55,291 | INFO     | process IDs to be killed: [4112127] (in reverse order)
[2025-07-22 06:32:27] 2025-07-22 10:31:55,430 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 06:32:27] 2025-07-22 10:31:55,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 06:32:27] 2025-07-22 10:31:55,490 | INFO     | did not find any defunct processes belonging to 4112127
[2025-07-22 06:32:27] 2025-07-22 10:31:55,563 | INFO     | did not find any defunct processes belonging to 4112127
[2025-07-22 06:32:27] 2025-07-22 10:31:55,563 | INFO     | ready for new job
[2025-07-22 06:32:27] 2025-07-22 10:31:55,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 06:32:27] 2025-07-22 10:31:55,583 | INFO     | ***************************************
[2025-07-22 06:32:27] 2025-07-22 10:31:55,583 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 06:32:27] 2025-07-22 10:31:55,584 | INFO     | ***************************************
[2025-07-22 06:32:27] 2025-07-22 10:31:55,584 | INFO     | 
[2025-07-22 06:32:27] 2025-07-22 10:31:55,603 | INFO     | architecture information:
[2025-07-22 06:32:27] 2025-07-22 10:31:55,604 | INFO     | executing command: cat /etc/os-release
[2025-07-22 06:32:27] 2025-07-22 10:31:55,661 | INFO     | cat /etc/os-release:
[2025-07-22 06:32:27] NAME="CentOS Linux"
[2025-07-22 06:32:27] VERSION="7 (Core)"
[2025-07-22 06:32:27] ID="centos"
[2025-07-22 06:32:27] ID_LIKE="rhel fedora"
[2025-07-22 06:32:27] VERSION_ID="7"
[2025-07-22 06:32:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 06:32:27] ANSI_COLOR="0;31"
[2025-07-22 06:32:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 06:32:27] HOME_URL="https://www.centos.org/"
[2025-07-22 06:32:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 06:32:27] 
[2025-07-22 06:32:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 06:32:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 06:32:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 06:32:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 06:32:27] 
[2025-07-22 06:32:27] 2025-07-22 10:31:55,661 | INFO     | ***************************************
[2025-07-22 06:32:27] 2025-07-22 10:31:56,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 06:32:27] 2025-07-22 10:31:56,273 | INFO     | sufficient remaining disk space (76265029632 B)
[2025-07-22 06:32:27] 2025-07-22 10:31:56,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 06:32:27] 2025-07-22 10:31:56,274 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 06:32:27] 2025-07-22 10:31:56,274 | INFO     | update_server=False
[2025-07-22 06:32:27] 2025-07-22 10:31:56,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 06:32:27] 2025-07-22 10:31:56,597 | INFO     | all payload control threads have been joined
[2025-07-22 06:32:27] 2025-07-22 10:31:56,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 06:32:27] 2025-07-22 10:31:56,934 | INFO     | all data control threads have been joined
[2025-07-22 06:32:27] 2025-07-22 10:31:57,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 06:32:27] 2025-07-22 10:31:57,047 | INFO     | aborting loop
[2025-07-22 06:32:27] 2025-07-22 10:31:57,279 | INFO     | [job] retrieve thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:57,453 | INFO     | [payload] failed_post thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:57,575 | INFO     | all job control threads have been joined
[2025-07-22 06:32:27] 2025-07-22 10:31:57,603 | INFO     | [payload] control thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:57,943 | INFO     | [data] control thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:57,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,038 | INFO     | [job] validate thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,048 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,053 | INFO     | [job] job monitor thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,059 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,559 | INFO     | [data] copytool_in thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,582 | INFO     | [job] control thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,591 | INFO     | [payload] validate_post thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,640 | INFO     | [data] copytool_out thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,738 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:31:58,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 06:32:27] 2025-07-22 10:31:58,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 06:32:27] 2025-07-22 10:31:59,800 | INFO     | [job] queue monitor thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:32:02,938 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 06:32:27] 2025-07-22 10:32:03,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632744204096)>', '<ExcThread(monitor, started 140632244868864)>']
[2025-07-22 06:32:27] 2025-07-22 10:32:08,309 | INFO     | all workflow threads have been joined
[2025-07-22 06:32:27] 2025-07-22 10:32:08,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 06:32:27] 2025-07-22 10:32:08,310 | INFO     | traces error code: 0
[2025-07-22 06:32:27] 2025-07-22 10:32:08,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 06:32:27] 2025-07-22 10:32:27,404 | INFO     | PID=4102210 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 06:32:27] 2025-07-22 10:32:27,405 | INFO     | .. there are 33 such processes running
[2025-07-22 06:32:27] 2025-07-22 10:32:27,406 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 06:32:27] 2025-07-22 10:32:27,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 06:32:27] 2025-07-22 10:32:27,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 06:32:27] 2025-07-22 10:32:27,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 06:32:27] 2025-07-22 10:32:27,406 | INFO     | [monitor] control thread has ended
[2025-07-22 06:32:27] 2025-07-22 10:32:27,567 [wrapper] ==== pilot stdout END ====
[2025-07-22 06:32:27] 2025-07-22 10:32:27,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 06:32:27] 2025-07-22 10:32:27,678 [wrapper] pilotpid: 4102210
[2025-07-22 06:32:27] 2025-07-22 10:32:27,700 [wrapper] Pilot exit status: 0
[2025-07-22 06:32:27] 2025-07-22 10:32:27,713 [wrapper] pandaids: 6741825685
[2025-07-22 06:32:27] 2025-07-22 10:32:27,835 [wrapper] cleanup supervisor_pilot 1211722 4102211
[2025-07-22 06:32:27] 2025-07-22 10:32:27,839 [wrapper] Test setup, not cleaning
[2025-07-22 06:32:27] 2025-07-22 10:32:27,841 [wrapper] apfmon messages muted
[2025-07-22 06:32:27] 2025-07-22 10:32:27,844 [wrapper] ==== wrapper stdout END ====
[2025-07-22 06:32:27] 2025-07-22 10:32:27,856 [wrapper] ==== wrapper stderr END ====
[2025-07-22 06:32:27]  *** Error codes and diagnostics ***
[2025-07-22 06:32:27]     "exeErrorCode": 0,
[2025-07-22 06:32:27]     "exeErrorDiag": "",
[2025-07-22 06:32:27]     "pilotErrorCode": 0,
[2025-07-22 06:32:27]     "pilotErrorDiag": "",
[2025-07-22 06:32:27]  *** Listing of results directory ***
[2025-07-22 06:32:27] total 606520
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 19:55 pilot3.tar.gz
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 20:12 queuedata.json
[2025-07-22 06:32:27] -rwx------. 1 boincer umatlas     36292 Jul 21 20:12 runpilot2-wrapper.sh
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas       100 Jul 21 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 06:32:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 21 23:28 run_atlas
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas       105 Jul 21 23:28 job.xml
[2025-07-22 06:32:27] -rw-r--r--. 2 boincer umatlas 330947639 Jul 21 23:28 EVNT.45697530._000160.pool.root.1
[2025-07-22 06:32:27] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 23:28 start_atlas.sh
[2025-07-22 06:32:27] drwxrwx--x. 2 boincer umatlas      4096 Jul 21 23:28 shared
[2025-07-22 06:32:27] -rw-r--r--. 2 boincer umatlas    542898 Jul 21 23:28 input.tar.gz
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas         0 Jul 21 23:28 boinc_lockfile
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas      2612 Jul 21 23:28 pandaJob.out
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas    977326 Jul 21 23:28 agis_schedconf.cvmfs.json
[2025-07-22 06:32:27] drwx------. 4 boincer umatlas      4096 Jul 21 23:28 pilot3
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas 281271167 Jul 22 06:30 HITS.45697532._003997.pool.root.1
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas       531 Jul 22 06:30 boinc_task_state.xml
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas      1042 Jul 22 06:31 memory_monitor_summary.json
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas   1593031 Jul 22 06:31 agis_ddmendpoints.agis.ALL.json
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas    528963 Jul 22 06:31 log.45697532._003997.job.log.tgz.1
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas      7830 Jul 22 06:31 heartbeat.json
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas      6656 Jul 22 06:31 init_data.xml
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas        28 Jul 22 06:32 wrapper_checkpoint.txt
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas        95 Jul 22 06:32 pilot_heartbeat.json
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas       823 Jul 22 06:32 pilotlog.txt
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 06:32 boinc_mmap_file
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas   1963498 Jul 22 06:32 log.45697532._003997.job.log.1
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas       357 Jul 22 06:32 output.list
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas       620 Jul 22 06:32 runtime_log
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas   2508800 Jul 22 06:32 result.tar.gz
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas       654 Jul 22 06:32 zxKNDmVnFy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOVHLDmMj7zKm.diag
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas      8648 Jul 22 06:32 runtime_log.err
[2025-07-22 06:32:27] -rw-r--r--. 1 boincer umatlas     21311 Jul 22 06:32 stderr.txt
[2025-07-22 06:32:27] HITS file was successfully produced:
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas 281271167 Jul 22 06:30 shared/HITS.pool.root.1
[2025-07-22 06:32:27]  *** Contents of shared directory: ***
[2025-07-22 06:32:27] total 600880
[2025-07-22 06:32:27] -rw-r--r--. 2 boincer umatlas 330947639 Jul 21 23:28 ATLAS.root_0
[2025-07-22 06:32:27] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 23:28 start_atlas.sh
[2025-07-22 06:32:27] -rw-r--r--. 2 boincer umatlas    542898 Jul 21 23:28 input.tar.gz
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas 281271167 Jul 22 06:30 HITS.pool.root.1
[2025-07-22 06:32:27] -rw-------. 1 boincer umatlas   2508800 Jul 22 06:32 result.tar.gz
06:32:49 (4098221): run_atlas exited; CPU time 74292.952663
06:32:49 (4098221): called boinc_finish(0)

</stderr_txt>
]]>

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