Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:27:06 (419): wrapper (7.7.26015): starting
10:27:06 (419): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 10:27:06] Arguments: --nthreads 8
[2025-07-22 10:27:06] Threads: 8
[2025-07-22 10:27:06] Checking for CVMFS
[2025-07-22 10:27:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 10:27:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 10:27:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 10:27:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 10:27:08] 2.11.2.0 32728 102075 109128 148614 3 141 20877927 25165825 2244 130560 0 78690445 99.886 44790278 3407 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-22 10:27:08] CVMFS is ok
[2025-07-22 10:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 10:27:08] Checking for apptainer binary...
[2025-07-22 10:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 10:27:08] Running /usr/bin/apptainer --version
[2025-07-22 10:27:08] apptainer version 1.3.2-1.el7
[2025-07-22 10:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 10:29:21] cg-vwn337.simple-grid.lan
[2025-07-22 10:29:21] apptainer works
[2025-07-22 10:29:21] Set ATHENA_PROC_NUMBER=8
[2025-07-22 10:29:21] Set ATHENA_CORE_NUMBER=8
[2025-07-22 10:29:21] Starting ATLAS job with PandaID=6741711336
[2025-07-22 10:29:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 15:53:31]  *** The last 200 lines of the pilot log: ***
[2025-07-22 15:53:31] 2025-07-22 13:52:58,336 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 15:53:31] 2025-07-22 13:52:58,337 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-22 15:53:31] 2025-07-22 13:52:58,339 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6741711336/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,340 | INFO     | extracted standard info from prmon json
[2025-07-22 15:53:31] 2025-07-22 13:52:58,340 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 15:53:31] 2025-07-22 13:52:58,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 15:53:31] 2025-07-22 13:52:58,340 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 15:53:31] 2025-07-22 13:52:58,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 15:53:31] 2025-07-22 13:52:58,347 | INFO     | fitting pss+swap vs Time
[2025-07-22 15:53:31] 2025-07-22 13:52:58,348 | INFO     | sum of square deviations: 9877610318.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,351 | INFO     | sum of deviations: 216008991.00000435
[2025-07-22 15:53:31] 2025-07-22 13:52:58,351 | INFO     | mean x: 1753182671.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,351 | INFO     | mean y: 2563753.116719243
[2025-07-22 15:53:31] 2025-07-22 13:52:58,352 | INFO     | -- intersect: -35775805.502159506
[2025-07-22 15:53:31] 2025-07-22 13:52:58,352 | INFO     | intersect: -35775805.502159506
[2025-07-22 15:53:31] 2025-07-22 13:52:58,352 | INFO     | chi2: 1.9704416681519352
[2025-07-22 15:53:31] 2025-07-22 13:52:58,353 | INFO     | sum of square deviations: 9417545878.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,356 | INFO     | sum of deviations: 136164748.99999502
[2025-07-22 15:53:31] 2025-07-22 13:52:58,356 | INFO     | mean x: 1753182518.5
[2025-07-22 15:53:31] 2025-07-22 13:52:58,356 | INFO     | mean y: 2563726.6602564105
[2025-07-22 15:53:31] 2025-07-22 13:52:58,357 | INFO     | -- intersect: -22784879.08855135
[2025-07-22 15:53:31] 2025-07-22 13:52:58,357 | INFO     | intersect: -22784879.08855135
[2025-07-22 15:53:31] 2025-07-22 13:52:58,357 | INFO     | chi2: 1.9703711370616894
[2025-07-22 15:53:31] 2025-07-22 13:52:58,357 | INFO     | current chi2=1.9703711370616894 (change=0.0035794558847279294 %)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,357 | INFO     | right removable region: 311
[2025-07-22 15:53:31] 2025-07-22 13:52:58,358 | INFO     | sum of square deviations: 9417545878.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,361 | INFO     | sum of deviations: -59838171826.50001
[2025-07-22 15:53:31] 2025-07-22 13:52:58,361 | INFO     | mean x: 1753182823.5
[2025-07-22 15:53:31] 2025-07-22 13:52:58,361 | INFO     | mean y: 2583552.4903846155
[2025-07-22 15:53:31] 2025-07-22 13:52:58,361 | INFO     | -- intersect: 11142136934.537785
[2025-07-22 15:53:31] 2025-07-22 13:52:58,362 | INFO     | intersect: 11142136934.537785
[2025-07-22 15:53:31] 2025-07-22 13:52:58,362 | INFO     | chi2: 0.2537633833842732
[2025-07-22 15:53:31] 2025-07-22 13:52:58,362 | INFO     | current chi2=0.2537633833842732 (change=87.1214973025679 %)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,363 | INFO     | sum of square deviations: 8971993338.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,366 | INFO     | sum of deviations: -58757771698.99999
[2025-07-22 15:53:31] 2025-07-22 13:52:58,366 | INFO     | mean x: 1753182976.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,366 | INFO     | mean y: 2583162.576547231
[2025-07-22 15:53:31] 2025-07-22 13:52:58,366 | INFO     | -- intersect: 11484215077.535664
[2025-07-22 15:53:31] 2025-07-22 13:52:58,366 | INFO     | intersect: 11484215077.535664
[2025-07-22 15:53:31] 2025-07-22 13:52:58,367 | INFO     | chi2: 0.23566916735197604
[2025-07-22 15:53:31] 2025-07-22 13:52:58,367 | INFO     | current chi2=0.23566916735197604 (change=7.130349458218372 %)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,367 | INFO     | left removable region: 20
[2025-07-22 15:53:31] 2025-07-22 13:52:58,368 | INFO     | sum of square deviations: 7641036290.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,370 | INFO     | sum of deviations: -39236308126.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,370 | INFO     | mean x: 1753183098.0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,371 | INFO     | mean y: 2576572.7147766324
[2025-07-22 15:53:31] 2025-07-22 13:52:58,371 | INFO     | -- intersect: 9005076969.741848
[2025-07-22 15:53:31] 2025-07-22 13:52:58,371 | INFO     | intersect: 9005076969.741848
[2025-07-22 15:53:31] 2025-07-22 13:52:58,371 | INFO     | chi2: 0.2024034559774099
[2025-07-22 15:53:31] 2025-07-22 13:52:58,371 | INFO     | -- intersect: 9005076969.741848
[2025-07-22 15:53:31] 2025-07-22 13:52:58,372 | INFO     | current memory leak: -5.13 B/s (using 291 data points, chi2=0.20)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,372 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,372 | INFO     | ..............................
[2025-07-22 15:53:31] 2025-07-22 13:52:58,372 | INFO     | . Timing measurements:
[2025-07-22 15:53:31] 2025-07-22 13:52:58,373 | INFO     | . get job = 0 s
[2025-07-22 15:53:31] 2025-07-22 13:52:58,373 | INFO     | . initial setup = 2 s
[2025-07-22 15:53:31] 2025-07-22 13:52:58,373 | INFO     | . payload setup = 11 s
[2025-07-22 15:53:31] 2025-07-22 13:52:58,373 | INFO     | . stage-in = 0 s
[2025-07-22 15:53:31] 2025-07-22 13:52:58,373 | INFO     | . payload execution = 19347 s
[2025-07-22 15:53:31] 2025-07-22 13:52:58,373 | INFO     | . stage-out = 1 s
[2025-07-22 15:53:31] 2025-07-22 13:52:58,373 | INFO     | . log creation = 0 s
[2025-07-22 15:53:31] 2025-07-22 13:52:58,373 | INFO     | ..............................
[2025-07-22 15:53:31] 2025-07-22 13:52:58,536 | INFO     | 
[2025-07-22 15:53:31] 2025-07-22 13:52:58,537 | INFO     | job summary report
[2025-07-22 15:53:31] 2025-07-22 13:52:58,537 | INFO     | --------------------------------------------------
[2025-07-22 15:53:31] 2025-07-22 13:52:58,537 | INFO     | PanDA job id: 6741711336
[2025-07-22 15:53:31] 2025-07-22 13:52:58,537 | INFO     | task id: 45697453
[2025-07-22 15:53:31] 2025-07-22 13:52:58,537 | INFO     | errors: (none)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 15:53:31] 2025-07-22 13:52:58,537 | INFO     | pilot state: finished 
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | transexitcode: 0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | exeerrorcode: 0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | exeerrordiag: 
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | exitcode: 0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | exitmsg: OK
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | cpuconsumptiontime: 73052 s
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | nevents: 400
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | neventsw: 0
[2025-07-22 15:53:31] 2025-07-22 13:52:58,538 | INFO     | pid: 10922
[2025-07-22 15:53:31] 2025-07-22 13:52:58,539 | INFO     | pgrp: 10922
[2025-07-22 15:53:31] 2025-07-22 13:52:58,539 | INFO     | corecount: 8
[2025-07-22 15:53:31] 2025-07-22 13:52:58,539 | INFO     | event service: False
[2025-07-22 15:53:31] 2025-07-22 13:52:58,539 | INFO     | sizes: {0: 2397342, 1: 2397541, 9: 2397803, 12: 2397831, 19362: 2430267, 19364: 2439437, 19377: 2439575}
[2025-07-22 15:53:31] 2025-07-22 13:52:58,539 | INFO     | --------------------------------------------------
[2025-07-22 15:53:31] 2025-07-22 13:52:58,539 | INFO     | 
[2025-07-22 15:53:31] 2025-07-22 13:52:58,539 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-22 15:53:31] 2025-07-22 13:52:58,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,586 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 15:53:31] 2025-07-22 13:52:58,586 | INFO     | job 6741711336 has completed (purged errors)
[2025-07-22 15:53:31] 2025-07-22 13:52:58,587 | INFO     | overall cleanup function is called
[2025-07-22 15:53:31] 2025-07-22 13:52:59,595 | INFO     | --- collectZombieJob: --- 10, [10922]
[2025-07-22 15:53:31] 2025-07-22 13:52:59,596 | INFO     | zombie collector waiting for pid 10922
[2025-07-22 15:53:31] 2025-07-22 13:52:59,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 15:53:31] 2025-07-22 13:52:59,596 | INFO     | collected zombie processes
[2025-07-22 15:53:31] 2025-07-22 13:52:59,596 | INFO     | will attempt to kill all subprocesses of pid=10922
[2025-07-22 15:53:31] 2025-07-22 13:52:59,694 | INFO     | process IDs to be killed: [10922] (in reverse order)
[2025-07-22 15:53:31] 2025-07-22 13:52:59,822 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 15:53:31] 2025-07-22 13:52:59,823 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 15:53:31] 2025-07-22 13:52:59,825 | INFO     | did not find any defunct processes belonging to 10922
[2025-07-22 15:53:31] 2025-07-22 13:52:59,833 | INFO     | did not find any defunct processes belonging to 10922
[2025-07-22 15:53:31] 2025-07-22 13:52:59,833 | INFO     | ready for new job
[2025-07-22 15:53:31] 2025-07-22 13:52:59,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 15:53:31] 2025-07-22 13:52:59,839 | INFO     | ***************************************
[2025-07-22 15:53:31] 2025-07-22 13:52:59,839 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 15:53:31] 2025-07-22 13:52:59,839 | INFO     | ***************************************
[2025-07-22 15:53:31] 2025-07-22 13:52:59,839 | INFO     | 
[2025-07-22 15:53:31] 2025-07-22 13:52:59,840 | INFO     | pilot is running in a VM
[2025-07-22 15:53:31] 2025-07-22 13:52:59,840 | INFO     | architecture information:
[2025-07-22 15:53:31] 2025-07-22 13:52:59,840 | INFO     | executing command: cat /etc/os-release
[2025-07-22 15:53:31] 2025-07-22 13:52:59,880 | INFO     | cat /etc/os-release:
[2025-07-22 15:53:31] NAME="CentOS Linux"
[2025-07-22 15:53:31] VERSION="7 (Core)"
[2025-07-22 15:53:31] ID="centos"
[2025-07-22 15:53:31] ID_LIKE="rhel fedora"
[2025-07-22 15:53:31] VERSION_ID="7"
[2025-07-22 15:53:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 15:53:31] ANSI_COLOR="0;31"
[2025-07-22 15:53:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 15:53:31] HOME_URL="https://www.centos.org/"
[2025-07-22 15:53:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 15:53:31] 
[2025-07-22 15:53:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 15:53:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 15:53:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 15:53:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 15:53:31] 
[2025-07-22 15:53:31] 2025-07-22 13:52:59,881 | INFO     | ***************************************
[2025-07-22 15:53:31] 2025-07-22 13:53:00,385 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-22 15:53:31] 2025-07-22 13:53:00,414 | INFO     | sufficient remaining disk space (497638440960 B)
[2025-07-22 15:53:31] 2025-07-22 13:53:00,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 15:53:31] 2025-07-22 13:53:00,415 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 15:53:31] 2025-07-22 13:53:00,415 | INFO     | update_server=False
[2025-07-22 15:53:31] 2025-07-22 13:53:00,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 15:53:31] 2025-07-22 13:53:00,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 15:53:31] 2025-07-22 13:53:00,605 | INFO     | all job control threads have been joined
[2025-07-22 15:53:31] 2025-07-22 13:53:00,635 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-22 15:53:31] 2025-07-22 13:53:00,635 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-22 15:53:31] 2025-07-22 13:53:00,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 15:53:31] 2025-07-22 13:53:00,635 | INFO     | will abort loop
[2025-07-22 15:53:31] 2025-07-22 13:53:00,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 15:53:31] 2025-07-22 13:53:01,137 | INFO     | all data control threads have been joined
[2025-07-22 15:53:31] 2025-07-22 13:53:01,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 15:53:31] 2025-07-22 13:53:01,330 | INFO     | all payload control threads have been joined
[2025-07-22 15:53:31] 2025-07-22 13:53:01,420 | INFO     | [job] retrieve thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:01,421 | INFO     | [job] queue monitor thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:01,611 | INFO     | [job] control thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:01,624 | INFO     | [job] validate thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:01,642 | INFO     | [job] job monitor thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:01,931 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:01,976 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:02,099 | INFO     | [data] copytool_in thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:02,144 | INFO     | [data] control thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:02,332 | INFO     | [payload] control thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:02,399 | INFO     | [payload] validate_post thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:02,650 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:02,921 | INFO     | [payload] failed_post thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:03,314 | INFO     | [data] copytool_out thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:04,952 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:11,382 | INFO     | job.realtimelogging is not enabled
[2025-07-22 15:53:31] 2025-07-22 13:53:12,388 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 15:53:31] 2025-07-22 13:53:13,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401198241600)>', '<ExcThread(monitor, started 140400467638016)>']
[2025-07-22 15:53:31] 2025-07-22 13:53:18,522 | INFO     | all workflow threads have been joined
[2025-07-22 15:53:31] 2025-07-22 13:53:18,523 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 15:53:31] 2025-07-22 13:53:18,523 | INFO     | traces error code: 0
[2025-07-22 15:53:31] 2025-07-22 13:53:18,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 15:53:31] 2025-07-22 13:53:30,060 | INFO     | PID=4415 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-22 15:53:31] 2025-07-22 13:53:30,061 | INFO     | .. there are 9 such processes running
[2025-07-22 15:53:31] 2025-07-22 13:53:30,062 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 15:53:31] 2025-07-22 13:53:30,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 15:53:31] 2025-07-22 13:53:30,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 15:53:31] 2025-07-22 13:53:30,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 15:53:31] 2025-07-22 13:53:30,063 | INFO     | [monitor] control thread has ended
[2025-07-22 15:53:31] 2025-07-22 13:53:30,195 [wrapper] ==== pilot stdout END ====
[2025-07-22 15:53:31] 2025-07-22 13:53:30,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 15:53:31] 2025-07-22 13:53:30,364 [wrapper] pilotpid: 4415
[2025-07-22 15:53:31] 2025-07-22 13:53:30,423 [wrapper] Pilot exit status: 0
[2025-07-22 15:53:31] 2025-07-22 13:53:30,650 [wrapper] pandaids: 6741711336
[2025-07-22 15:53:31] 2025-07-22 13:53:30,879 [wrapper] cleanup supervisor_pilot 28650 4416
[2025-07-22 15:53:31] 2025-07-22 13:53:30,891 [wrapper] Test setup, not cleaning
[2025-07-22 15:53:31] 2025-07-22 13:53:30,904 [wrapper] apfmon messages muted
[2025-07-22 15:53:31] 2025-07-22 13:53:30,914 [wrapper] ==== wrapper stdout END ====
[2025-07-22 15:53:31] 2025-07-22 13:53:30,957 [wrapper] ==== wrapper stderr END ====
[2025-07-22 15:53:31]  *** Error codes and diagnostics ***
[2025-07-22 15:53:31]     "exeErrorCode": 0,
[2025-07-22 15:53:31]     "exeErrorDiag": "",
[2025-07-22 15:53:31]     "pilotErrorCode": 0,
[2025-07-22 15:53:31]     "pilotErrorDiag": "",
[2025-07-22 15:53:31]  *** Listing of results directory ***
[2025-07-22 15:53:31] total 579344
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc      5112 Jul 22 03:25 queuedata.json
[2025-07-22 15:53:31] -rwx------. 1 boinc boinc     36292 Jul 22 03:27 runpilot2-wrapper.sh
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc    530466 Jul 22 03:27 pilot3.tar.gz
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc       100 Jul 22 10:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 15:53:31] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 10:27 run_atlas
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc       105 Jul 22 10:27 job.xml
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc      6390 Jul 22 10:27 init_data.xml
[2025-07-22 15:53:31] -rw-r--r--. 2 boinc boinc 319766056 Jul 22 10:27 EVNT.45697451._000102.pool.root.1
[2025-07-22 15:53:31] -rw-r--r--. 2 boinc boinc     15095 Jul 22 10:27 start_atlas.sh
[2025-07-22 15:53:31] drwxrwx--x. 2 boinc boinc        68 Jul 22 10:27 shared
[2025-07-22 15:53:31] -rw-r--r--. 2 boinc boinc    542905 Jul 22 10:27 input.tar.gz
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc         0 Jul 22 10:27 boinc_lockfile
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc      2633 Jul 22 10:29 pandaJob.out
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc    976662 Jul 22 10:29 agis_schedconf.cvmfs.json
[2025-07-22 15:53:31] drwx------. 4 boinc boinc      4096 Jul 22 10:29 pilot3
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc 265437426 Jul 22 15:51 HITS.45697453._002543.pool.root.1
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc       531 Jul 22 15:52 boinc_task_state.xml
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc      1014 Jul 22 15:52 memory_monitor_summary.json
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc   1593031 Jul 22 15:52 agis_ddmendpoints.agis.ALL.json
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc    434526 Jul 22 15:52 log.45697453._002543.job.log.tgz.1
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc      7768 Jul 22 15:52 heartbeat.json
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc        28 Jul 22 15:53 wrapper_checkpoint.txt
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc      8192 Jul 22 15:53 boinc_mmap_file
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc        95 Jul 22 15:53 pilot_heartbeat.json
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc       819 Jul 22 15:53 pilotlog.txt
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc   1660634 Jul 22 15:53 log.45697453._002543.job.log.1
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc       357 Jul 22 15:53 output.list
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc       620 Jul 22 15:53 runtime_log
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc   2109440 Jul 22 15:53 result.tar.gz
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc      8660 Jul 22 15:53 runtime_log.err
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc       656 Jul 22 15:53 aJAMDmbyGy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmu8tKDmNCoXgn.diag
[2025-07-22 15:53:31] -rw-r--r--. 1 boinc boinc     20730 Jul 22 15:53 stderr.txt
[2025-07-22 15:53:31] HITS file was successfully produced:
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc 265437426 Jul 22 15:51 shared/HITS.pool.root.1
[2025-07-22 15:53:31]  *** Contents of shared directory: ***
[2025-07-22 15:53:31] total 574100
[2025-07-22 15:53:31] -rw-r--r--. 2 boinc boinc 319766056 Jul 22 10:27 ATLAS.root_0
[2025-07-22 15:53:31] -rw-r--r--. 2 boinc boinc     15095 Jul 22 10:27 start_atlas.sh
[2025-07-22 15:53:31] -rw-r--r--. 2 boinc boinc    542905 Jul 22 10:27 input.tar.gz
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc 265437426 Jul 22 15:51 HITS.pool.root.1
[2025-07-22 15:53:31] -rw-------. 1 boinc boinc   2109440 Jul 22 15:53 result.tar.gz
15:53:33 (419): run_atlas exited; CPU time 73290.966790
15:53:33 (419): called boinc_finish(0)

</stderr_txt>
]]>

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