Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:39:50 (57848): wrapper (7.7.26015): starting
19:39:50 (57848): wrapper: running run_atlas (--nthreads 8)
[2025-07-21 19:39:50] Arguments: --nthreads 8
[2025-07-21 19:39:50] Threads: 8
[2025-07-21 19:39:50] Checking for CVMFS
[2025-07-21 19:39:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 19:39:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 19:39:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 19:39:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 19:39:51] 2.11.3.0 25003 471118 217840 148605 0 233 25010724 45568000 15257 130560 0 2545735298 99.759 2013563937 19403 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-21 19:39:51] CVMFS is ok
[2025-07-21 19:39:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 19:39:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 19:39:51] Further information can be found at the LHC@home message board.
[2025-07-21 19:39:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 19:39:51] Checking for apptainer binary...
[2025-07-21 19:39:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 19:39:51] Running /usr/bin/apptainer --version
[2025-07-21 19:39:51] apptainer version 1.3.3-1.el9
[2025-07-21 19:39:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 19:39:51] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0012.triumf.lcg
[2025-07-21 19:39:51] apptainer works
[2025-07-21 19:39:51] Set ATHENA_PROC_NUMBER=8
[2025-07-21 19:39:51] Set ATHENA_CORE_NUMBER=8
[2025-07-21 19:39:51] Starting ATLAS job with PandaID=6741710869
[2025-07-21 19:39:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-21 19:45:30]  *** The last 200 lines of the pilot log: ***
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | WARNING  | wrong length of table data, x=[1753152105.0], y=[938.0] (must be same and length>=4)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | ..............................
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . Timing measurements:
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . get job = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . initial setup = 5 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . payload setup = 19 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . stage-in = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . payload execution = 59 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . stage-out = 2 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . log creation = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | ..............................
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 19:45:30] 2025-07-22 02:44:56,584 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741710869/pilotlog.txt
[2025-07-21 19:45:30] 2025-07-22 02:44:56,595 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-21 19:45:30] - Log from pilotlog.txt -
[2025-07-21 19:45:30] 2025-07-22 02:44:56,580 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741710869/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | INFO     | extracted standard info from prmon json
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | WARNING  | wrong length of table data, x=[1753152105.0], y=[938.0] (must be same and length>=4)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | ..............................
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . Timing measurements:
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . get job = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . initial setup = 5 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . payload setup = 19 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . stage-in = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . payload execution = 59 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . stage-out = 2 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . log creation = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | ..............................
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 19:45:30] 2025-07-22 02:44:56,584 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741710869/pilotlog.txt
[2025-07-21 19:45:30] 2025-07-22 02:44:56,595 | WARNING  | 
[2025-07-21 19:45:30] [begin log extracts]
[2025-07-21 19:45:30] - Log from pilotlog.txt -
[2025-07-21 19:45:30] 2025-07-22 02:44:56,580 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741710869/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | INFO     | extracted standard info from prmon json
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 19:45:30] 2025-07-22 02:44:56,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | WARNING  | wrong length of table data, x=[1753152105.0], y=[938.0] (must be same and length>=4)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,582 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | ..............................
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . Timing measurements:
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . get job = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . initial setup = 5 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . payload setup = 19 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . stage-in = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . payload execution = 59 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . stage-out = 2 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | . log creation = 0 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | ..............................
[2025-07-21 19:45:30] 2025-07-22 02:44:56,583 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 19:45:30] 2025-07-22 02:44:56,584 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741710869/pilotlog.txt
[2025-07-21 19:45:30] [end log extracts]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,595 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,596 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-21 19:45:30] 2025-07-22 02:44:56,683 | INFO     | 
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | job summary report
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | --------------------------------------------------
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | PanDA job id: 6741710869
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | task id: 45697472
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-21 19:42:16,854 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | pilot state: failed 
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | transexitcode: 65
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | exeerrorcode: 65
[2025-07-21 19:45:30] 2025-07-22 02:44:56,684 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | exitcode: 65
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | cpuconsumptiontime: 17 s
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | nevents: 0
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | neventsw: 0
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | pid: 68003
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | pgrp: 68003
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | corecount: 8
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | event service: False
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | sizes: {0: 2397525, 11: 2397525, 13: 2397815, 22: 2397871, 83: 2421124, 87: 2425416, 90: 2425572, 230: 2425738}
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | --------------------------------------------------
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | 
[2025-07-21 19:45:30] 2025-07-22 02:44:56,685 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-21 19:45:30] 2025-07-22 02:44:56,702 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,702 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-21 19:45:30] 2025-07-22 02:44:56,704 | INFO     | job 6741710869 has completed (purged errors)
[2025-07-21 19:45:30] 2025-07-22 02:44:56,704 | INFO     | overall cleanup function is called
[2025-07-21 19:45:30] 2025-07-22 02:44:57,715 | INFO     | --- collectZombieJob: --- 10, [68003]
[2025-07-21 19:45:30] 2025-07-22 02:44:57,715 | INFO     | zombie collector waiting for pid 68003
[2025-07-21 19:45:30] 2025-07-22 02:44:57,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-21 19:45:30] 2025-07-22 02:44:57,716 | INFO     | collected zombie processes
[2025-07-21 19:45:30] 2025-07-22 02:44:57,716 | INFO     | will attempt to kill all subprocesses of pid=68003
[2025-07-21 19:45:30] 2025-07-22 02:44:59,159 | INFO     | process IDs to be killed: [68003] (in reverse order)
[2025-07-21 19:45:30] 2025-07-22 02:44:59,477 | WARNING  | found no corresponding commands to process id(s)
[2025-07-21 19:45:30] 2025-07-22 02:44:59,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-21 19:45:30] 2025-07-22 02:44:59,509 | INFO     | did not find any defunct processes belonging to 68003
[2025-07-21 19:45:30] 2025-07-22 02:44:59,517 | INFO     | did not find any defunct processes belonging to 68003
[2025-07-21 19:45:30] 2025-07-22 02:44:59,517 | INFO     | ready for new job
[2025-07-21 19:45:30] 2025-07-22 02:44:59,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-21 19:45:30] 2025-07-22 02:44:59,518 | INFO     | ***************************************
[2025-07-21 19:45:30] 2025-07-22 02:44:59,518 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-21 19:45:30] 2025-07-22 02:44:59,518 | INFO     | ***************************************
[2025-07-21 19:45:30] 2025-07-22 02:44:59,518 | INFO     | 
[2025-07-21 19:45:30] 2025-07-22 02:44:59,532 | INFO     | architecture information:
[2025-07-21 19:45:30] 2025-07-22 02:44:59,533 | INFO     | executing command: cat /etc/os-release
[2025-07-21 19:45:30] 2025-07-22 02:44:59,545 | INFO     | cat /etc/os-release:
[2025-07-21 19:45:30] NAME="CentOS Linux"
[2025-07-21 19:45:30] VERSION="7 (Core)"
[2025-07-21 19:45:30] ID="centos"
[2025-07-21 19:45:30] ID_LIKE="rhel fedora"
[2025-07-21 19:45:30] VERSION_ID="7"
[2025-07-21 19:45:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-21 19:45:30] ANSI_COLOR="0;31"
[2025-07-21 19:45:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-21 19:45:30] HOME_URL="https://www.centos.org/"
[2025-07-21 19:45:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-21 19:45:30] 
[2025-07-21 19:45:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-21 19:45:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-21 19:45:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-21 19:45:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-21 19:45:30] 
[2025-07-21 19:45:30] 2025-07-22 02:44:59,545 | INFO     | ***************************************
[2025-07-21 19:45:30] 2025-07-22 02:45:00,049 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-21 19:45:30] 2025-07-22 02:45:00,144 | INFO     | sufficient remaining disk space (1154593325056 B)
[2025-07-21 19:45:30] 2025-07-22 02:45:00,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-21 19:45:30] 2025-07-22 02:45:00,145 | INFO     | current server update state: UPDATING_FINAL
[2025-07-21 19:45:30] 2025-07-22 02:45:00,145 | INFO     | update_server=False
[2025-07-21 19:45:30] 2025-07-22 02:45:00,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-21 19:45:30] 2025-07-22 02:45:00,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-21 19:45:30] 2025-07-22 02:45:00,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-21 19:45:30] 2025-07-22 02:45:00,146 | INFO     | aborting loop
[2025-07-21 19:45:30] 2025-07-22 02:45:01,151 | INFO     | [job] retrieve thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:01,152 | INFO     | [job] job monitor thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:01,205 | INFO     | all data control threads have been joined
[2025-07-21 19:45:30] 2025-07-22 02:45:01,280 | INFO     | [payload] execute_payloads thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:01,307 | INFO     | all job control threads have been joined
[2025-07-21 19:45:30] 2025-07-22 02:45:01,344 | INFO     | [data] copytool_in thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:01,464 | INFO     | [payload] validate_pre thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:01,577 | INFO     | all payload control threads have been joined
[2025-07-21 19:45:30] 2025-07-22 02:45:01,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-21 19:45:30] 2025-07-22 02:45:01,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-21 19:45:30] 2025-07-22 02:45:01,747 | INFO     | [payload] validate_post thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,153 | INFO     | [data] copytool_out thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,211 | INFO     | [data] control thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,215 | INFO     | [job] validate thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,313 | INFO     | [job] control thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,429 | INFO     | [job] create_data_payload thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,494 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,583 | INFO     | [payload] control thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,654 | INFO     | [payload] failed_post thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:02,720 | INFO     | [job] queue monitor thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:05,648 | INFO     | [data] queue_monitor thread has finished
[2025-07-21 19:45:30] 2025-07-22 02:45:06,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029807417152)>', '<ExcThread(monitor, started 140029271725824)>']
[2025-07-21 19:45:30] 2025-07-22 02:45:11,574 | INFO     | all workflow threads have been joined
[2025-07-21 19:45:30] 2025-07-22 02:45:11,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-21 19:45:30] 2025-07-22 02:45:11,574 | INFO     | traces error code: 0
[2025-07-21 19:45:30] 2025-07-22 02:45:11,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-21 19:45:30] 2025-07-22 02:45:29,608 | INFO     | PID=61643 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-21 19:45:30] 2025-07-22 02:45:29,609 | INFO     | .. there are 33 such processes running
[2025-07-21 19:45:30] 2025-07-22 02:45:29,609 | INFO     | found 0 job(s) in 20 queues
[2025-07-21 19:45:30] 2025-07-22 02:45:29,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-21 19:45:30] 2025-07-22 02:45:29,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-21 19:45:30] 2025-07-22 02:45:29,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-21 19:45:30] 2025-07-22 02:45:29,610 | INFO     | [monitor] control thread has ended
[2025-07-21 19:45:30] 2025-07-22 02:45:29,951 [wrapper] ==== pilot stdout END ====
[2025-07-21 19:45:30] 2025-07-22 02:45:29,973 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-21 19:45:30] 2025-07-22 02:45:29,986 [wrapper] pilotpid: 61643
[2025-07-21 19:45:30] 2025-07-22 02:45:30,007 [wrapper] Pilot exit status: 0
[2025-07-21 19:45:30] 2025-07-22 02:45:30,189 [wrapper] pandaids: 6741710869
[2025-07-21 19:45:30] 2025-07-22 02:45:30,310 [wrapper] cleanup supervisor_pilot   61649 61644
[2025-07-21 19:45:30] 2025-07-22 02:45:30,313 [wrapper] Test setup, not cleaning
[2025-07-21 19:45:30] 2025-07-22 02:45:30,314 [wrapper] apfmon messages muted
[2025-07-21 19:45:30] 2025-07-22 02:45:30,316 [wrapper] ==== wrapper stdout END ====
[2025-07-21 19:45:30] 2025-07-22 02:45:30,318 [wrapper] ==== wrapper stderr END ====
[2025-07-21 19:45:30]  *** Error codes and diagnostics ***
[2025-07-21 19:45:30]     "exeErrorCode": 65,
[2025-07-21 19:45:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 19:45:30]     "pilotErrorCode": 1305,
[2025-07-21 19:45:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 19:45:30]  *** Listing of results directory ***
[2025-07-21 19:45:30] total 326364
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc    530466 Jul 21 18:12 pilot3.tar.gz
[2025-07-21 19:45:30] -rwx------. 1 boinc boinc     36292 Jul 21 18:14 runpilot2-wrapper.sh
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc      5112 Jul 21 18:14 queuedata.json
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc       100 Jul 21 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-21 19:45:30] -rwxr-xr-x. 1 boinc boinc      7986 Jul 21 19:39 run_atlas
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc       105 Jul 21 19:39 job.xml
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc      6449 Jul 21 19:39 init_data.xml
[2025-07-21 19:45:30] -rw-r--r--. 2 boinc boinc 330115592 Jul 21 19:39 EVNT.45697470._000001.pool.root.1
[2025-07-21 19:45:30] -rw-r--r--. 2 boinc boinc     15095 Jul 21 19:39 start_atlas.sh
[2025-07-21 19:45:30] drwxrwx--x. 2 boinc boinc      4096 Jul 21 19:39 shared
[2025-07-21 19:45:30] -rw-r--r--. 2 boinc boinc    542887 Jul 21 19:39 input.tar.gz
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc         0 Jul 21 19:39 boinc_lockfile
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc      2603 Jul 21 19:39 pandaJob.out
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc    977326 Jul 21 19:40 agis_schedconf.cvmfs.json
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc   1593055 Jul 21 19:40 agis_ddmendpoints.agis.ALL.json
[2025-07-21 19:45:30] drwx------. 4 boinc boinc      4096 Jul 21 19:40 pilot3
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc       524 Jul 21 19:42 boinc_task_state.xml
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc       943 Jul 21 19:42 memory_monitor_summary.json
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc     21722 Jul 21 19:42 log.45697472._000009.job.log.tgz.1
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc      8371 Jul 21 19:44 heartbeat.json
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc      8192 Jul 21 19:45 boinc_mmap_file
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc        23 Jul 21 19:45 wrapper_checkpoint.txt
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc       821 Jul 21 19:45 pilotlog.txt
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc        95 Jul 21 19:45 pilot_heartbeat.json
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc     82465 Jul 21 19:45 log.45697472._000009.job.log.1
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc       188 Jul 21 19:45 output.list
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc       620 Jul 21 19:45 runtime_log
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc    122880 Jul 21 19:45 result.tar.gz
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc      8648 Jul 21 19:45 runtime_log.err
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc       645 Jul 21 19:45 booNDmQlGy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm65tKDmZ7YbGn.diag
[2025-07-21 19:45:30] -rw-r--r--. 1 boinc boinc     21941 Jul 21 19:45 stderr.txt
[2025-07-21 19:45:30] No HITS result produced
[2025-07-21 19:45:30]  *** Contents of shared directory: ***
[2025-07-21 19:45:30] total 323052
[2025-07-21 19:45:30] -rw-r--r--. 2 boinc boinc 330115592 Jul 21 19:39 ATLAS.root_0
[2025-07-21 19:45:30] -rw-r--r--. 2 boinc boinc     15095 Jul 21 19:39 start_atlas.sh
[2025-07-21 19:45:30] -rw-r--r--. 2 boinc boinc    542887 Jul 21 19:39 input.tar.gz
[2025-07-21 19:45:30] -rw-------. 1 boinc boinc    122880 Jul 21 19:45 result.tar.gz
19:45:32 (57848): run_atlas exited; CPU time 28.289728
19:45:32 (57848): called boinc_finish(0)

</stderr_txt>
]]>

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