Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:25:42 (428954): wrapper (7.7.26015): starting
19:25:42 (428954): wrapper: running run_atlas (--nthreads 12)
[2025-07-21 19:25:42] Arguments: --nthreads 12
[2025-07-21 19:25:42] Threads: 12
[2025-07-21 19:25:42] Checking for CVMFS
[2025-07-21 19:25:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 19:25:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 19:25:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 19:25:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 19:25:44] 2.11.5.0 7157 29338 334868 148605 2 329 36913581 45568001 19001 130560 0 181981041 99.666 181678532 31186 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-21 19:25:44] CVMFS is ok
[2025-07-21 19:25:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 19:25:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 19:25:44] Further information can be found at the LHC@home message board.
[2025-07-21 19:25:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 19:25:44] Checking for apptainer binary...
[2025-07-21 19:25:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 19:25:44] Running /usr/bin/apptainer --version
[2025-07-21 19:25:44] apptainer version 1.4.1-1.el9
[2025-07-21 19:25:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 19:25:44] wns0083.triumf.lcg
[2025-07-21 19:25:44] apptainer works
[2025-07-21 19:25:44] Set ATHENA_PROC_NUMBER=12
[2025-07-21 19:25:44] Set ATHENA_CORE_NUMBER=12
[2025-07-21 19:25:44] Starting ATLAS job with PandaID=6741710140
[2025-07-21 19:25:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-21 19:30:30]  *** The last 200 lines of the pilot log: ***
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | WARNING  | wrong length of table data, x=[1753151243.0], y=[1301.0] (must be same and length>=4)
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | could have reported an average CPU frequency of 2525 MHz (4 samples)
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | ..............................
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . Timing measurements:
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . get job = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . initial setup = 3 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . payload setup = 14 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . stage-in = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . payload execution = 37 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . stage-out = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . log creation = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | ..............................
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741710140/pilotlog.txt
[2025-07-21 19:30:30] 2025-07-22 02:29:57,004 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-21 19:30:30] - Log from pilotlog.txt -
[2025-07-21 19:30:30] 2025-07-22 02:29:56,898 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741710140/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | INFO     | extracted standard info from prmon json
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | WARNING  | wrong length of table data, x=[1753151243.0], y=[1301.0] (must be same and length>=4)
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | could have reported an average CPU frequency of 2525 MHz (4 samples)
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | ..............................
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . Timing measurements:
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . get job = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . initial setup = 3 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . payload setup = 14 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . stage-in = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . payload execution = 37 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . stage-out = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . log creation = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | ..............................
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741710140/pilotlog.txt
[2025-07-21 19:30:30] 2025-07-22 02:29:57,004 | WARNING  | 
[2025-07-21 19:30:30] [begin log extracts]
[2025-07-21 19:30:30] - Log from pilotlog.txt -
[2025-07-21 19:30:30] 2025-07-22 02:29:56,898 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741710140/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | INFO     | extracted standard info from prmon json
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 19:30:30] 2025-07-22 02:29:56,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | WARNING  | wrong length of table data, x=[1753151243.0], y=[1301.0] (must be same and length>=4)
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | could have reported an average CPU frequency of 2525 MHz (4 samples)
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | ..............................
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . Timing measurements:
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . get job = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . initial setup = 3 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . payload setup = 14 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . stage-in = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . payload execution = 37 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . stage-out = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | . log creation = 0 s
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | ..............................
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 19:30:30] 2025-07-22 02:29:56,900 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741710140/pilotlog.txt
[2025-07-21 19:30:30] [end log extracts]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,004 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-21 19:30:30] 2025-07-22 02:29:57,005 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-21 19:30:30] 2025-07-22 02:29:57,288 | INFO     | 
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | job summary report
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | --------------------------------------------------
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | PanDA job id: 6741710140
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | task id: 45697453
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-21 19:27:39,800 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | pilot state: failed 
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | transexitcode: 65
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | exeerrorcode: 65
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | exitcode: 65
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | cpuconsumptiontime: 16 s
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | nevents: 0
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | neventsw: 0
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | pid: 440136
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | pgrp: 440136
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | corecount: 12
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | event service: False
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | sizes: {0: 2397388, 1: 2397587, 2: 2397587, 11: 2397877, 12: 2397905, 55: 2421301, 57: 2425593, 58: 2425621, 184: 2425787}
[2025-07-21 19:30:30] 2025-07-22 02:29:57,289 | INFO     | --------------------------------------------------
[2025-07-21 19:30:30] 2025-07-22 02:29:57,290 | INFO     | 
[2025-07-21 19:30:30] 2025-07-22 02:29:57,290 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-21 19:30:30] 2025-07-22 02:29:57,360 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,362 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-21 19:30:30] 2025-07-22 02:29:57,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,362 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-21 19:30:30] 2025-07-22 02:29:57,362 | INFO     | job 6741710140 has completed (purged errors)
[2025-07-21 19:30:30] 2025-07-22 02:29:57,362 | INFO     | overall cleanup function is called
[2025-07-21 19:30:30] 2025-07-22 02:29:58,368 | INFO     | --- collectZombieJob: --- 10, [440136]
[2025-07-21 19:30:30] 2025-07-22 02:29:58,368 | INFO     | zombie collector waiting for pid 440136
[2025-07-21 19:30:30] 2025-07-22 02:29:58,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-21 19:30:30] 2025-07-22 02:29:58,369 | INFO     | collected zombie processes
[2025-07-21 19:30:30] 2025-07-22 02:29:58,369 | INFO     | will attempt to kill all subprocesses of pid=440136
[2025-07-21 19:30:30] 2025-07-22 02:29:59,259 | INFO     | process IDs to be killed: [440136] (in reverse order)
[2025-07-21 19:30:30] 2025-07-22 02:29:59,338 | WARNING  | found no corresponding commands to process id(s)
[2025-07-21 19:30:30] 2025-07-22 02:29:59,338 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-21 19:30:30] 2025-07-22 02:29:59,360 | INFO     | did not find any defunct processes belonging to 440136
[2025-07-21 19:30:30] 2025-07-22 02:29:59,398 | INFO     | did not find any defunct processes belonging to 440136
[2025-07-21 19:30:30] 2025-07-22 02:29:59,398 | INFO     | ready for new job
[2025-07-21 19:30:30] 2025-07-22 02:29:59,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-21 19:30:30] 2025-07-22 02:29:59,399 | INFO     | ***************************************
[2025-07-21 19:30:30] 2025-07-22 02:29:59,399 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-21 19:30:30] 2025-07-22 02:29:59,399 | INFO     | ***************************************
[2025-07-21 19:30:30] 2025-07-22 02:29:59,399 | INFO     | 
[2025-07-21 19:30:30] 2025-07-22 02:29:59,419 | INFO     | architecture information:
[2025-07-21 19:30:30] 2025-07-22 02:29:59,420 | INFO     | executing command: cat /etc/os-release
[2025-07-21 19:30:30] 2025-07-22 02:29:59,485 | INFO     | cat /etc/os-release:
[2025-07-21 19:30:30] NAME="CentOS Linux"
[2025-07-21 19:30:30] VERSION="7 (Core)"
[2025-07-21 19:30:30] ID="centos"
[2025-07-21 19:30:30] ID_LIKE="rhel fedora"
[2025-07-21 19:30:30] VERSION_ID="7"
[2025-07-21 19:30:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-21 19:30:30] ANSI_COLOR="0;31"
[2025-07-21 19:30:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-21 19:30:30] HOME_URL="https://www.centos.org/"
[2025-07-21 19:30:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-21 19:30:30] 
[2025-07-21 19:30:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-21 19:30:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-21 19:30:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-21 19:30:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-21 19:30:30] 
[2025-07-21 19:30:30] 2025-07-22 02:29:59,486 | INFO     | ***************************************
[2025-07-21 19:30:30] 2025-07-22 02:29:59,988 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-21 19:30:30] 2025-07-22 02:30:00,001 | INFO     | sufficient remaining disk space (1830729809920 B)
[2025-07-21 19:30:30] 2025-07-22 02:30:00,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-21 19:30:30] 2025-07-22 02:30:00,002 | INFO     | current server update state: UPDATING_FINAL
[2025-07-21 19:30:30] 2025-07-22 02:30:00,002 | INFO     | update_server=False
[2025-07-21 19:30:30] 2025-07-22 02:30:00,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-21 19:30:30] 2025-07-22 02:30:00,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-21 19:30:30] 2025-07-22 02:30:00,002 | INFO     | aborting loop
[2025-07-21 19:30:30] 2025-07-22 02:30:00,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-21 19:30:30] 2025-07-22 02:30:00,321 | INFO     | all data control threads have been joined
[2025-07-21 19:30:30] 2025-07-22 02:30:00,520 | INFO     | all payload control threads have been joined
[2025-07-21 19:30:30] 2025-07-22 02:30:00,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-21 19:30:30] 2025-07-22 02:30:01,016 | INFO     | [job] retrieve thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,017 | INFO     | [job] job monitor thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,086 | INFO     | all job control threads have been joined
[2025-07-21 19:30:30] 2025-07-22 02:30:01,184 | INFO     | [payload] validate_pre thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,314 | INFO     | [payload] failed_post thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,327 | INFO     | [data] control thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,526 | INFO     | [payload] control thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,657 | INFO     | [payload] execute_payloads thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,906 | INFO     | [job] validate thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:01,969 | INFO     | [job] create_data_payload thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:02,052 | INFO     | [data] copytool_in thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:02,092 | INFO     | [job] control thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:02,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-21 19:30:30] 2025-07-22 02:30:02,537 | INFO     | [data] copytool_out thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:02,540 | INFO     | [payload] validate_post thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:03,323 | INFO     | [job] queue monitor thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:04,011 | INFO     | [data] queue_monitor thread has finished
[2025-07-21 19:30:30] 2025-07-22 02:30:04,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139934192912192)>', '<ExcThread(monitor, started 139933515769600)>']
[2025-07-21 19:30:30] 2025-07-22 02:30:09,325 | INFO     | all workflow threads have been joined
[2025-07-21 19:30:30] 2025-07-22 02:30:09,326 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-21 19:30:30] 2025-07-22 02:30:09,326 | INFO     | traces error code: 0
[2025-07-21 19:30:30] 2025-07-22 02:30:09,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-21 19:30:30] 2025-07-22 02:30:30,381 | INFO     | PID=433778 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-21 19:30:30] 2025-07-22 02:30:30,381 | INFO     | .. there are 35 such processes running
[2025-07-21 19:30:30] 2025-07-22 02:30:30,382 | INFO     | found 0 job(s) in 20 queues
[2025-07-21 19:30:30] 2025-07-22 02:30:30,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-21 19:30:30] 2025-07-22 02:30:30,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-21 19:30:30] 2025-07-22 02:30:30,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-21 19:30:30] 2025-07-22 02:30:30,382 | INFO     | [monitor] control thread has ended
[2025-07-21 19:30:30] 2025-07-22 02:30:30,554 [wrapper] ==== pilot stdout END ====
[2025-07-21 19:30:30] 2025-07-22 02:30:30,556 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-21 19:30:30] 2025-07-22 02:30:30,558 [wrapper] pilotpid: 433778
[2025-07-21 19:30:30] 2025-07-22 02:30:30,560 [wrapper] Pilot exit status: 0
[2025-07-21 19:30:30] 2025-07-22 02:30:30,569 [wrapper] pandaids: 6741710140
[2025-07-21 19:30:30] 2025-07-22 02:30:30,617 [wrapper] cleanup supervisor_pilot  433784 433779
[2025-07-21 19:30:30] 2025-07-22 02:30:30,619 [wrapper] Test setup, not cleaning
[2025-07-21 19:30:30] 2025-07-22 02:30:30,622 [wrapper] apfmon messages muted
[2025-07-21 19:30:30] 2025-07-22 02:30:30,624 [wrapper] ==== wrapper stdout END ====
[2025-07-21 19:30:30] 2025-07-22 02:30:30,626 [wrapper] ==== wrapper stderr END ====
[2025-07-21 19:30:30]  *** Error codes and diagnostics ***
[2025-07-21 19:30:30]     "exeErrorCode": 65,
[2025-07-21 19:30:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 19:30:30]     "pilotErrorCode": 1305,
[2025-07-21 19:30:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 19:30:30]  *** Listing of results directory ***
[2025-07-21 19:30:30] total 313080
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc    530466 Jul 21 17:28 pilot3.tar.gz
[2025-07-21 19:30:30] -rwx------. 1 boinc boinc     36292 Jul 21 17:51 runpilot2-wrapper.sh
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc      5112 Jul 21 17:51 queuedata.json
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc       100 Jul 21 19:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-21 19:30:30] -rwxr-xr-x. 1 boinc boinc      7986 Jul 21 19:25 run_atlas
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc       105 Jul 21 19:25 job.xml
[2025-07-21 19:30:30] -rw-r--r--. 2 boinc boinc 316518875 Jul 21 19:25 EVNT.45697451._000071.pool.root.1
[2025-07-21 19:30:30] -rw-r--r--. 2 boinc boinc     15095 Jul 21 19:25 start_atlas.sh
[2025-07-21 19:30:30] drwxrwx--x. 2 boinc boinc      4096 Jul 21 19:25 shared
[2025-07-21 19:30:30] -rw-r--r--. 2 boinc boinc    542903 Jul 21 19:25 input.tar.gz
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc      6597 Jul 21 19:25 init_data.xml
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc         0 Jul 21 19:25 boinc_lockfile
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc      2633 Jul 21 19:25 pandaJob.out
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc    977326 Jul 21 19:26 agis_schedconf.cvmfs.json
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc   1593055 Jul 21 19:26 agis_ddmendpoints.agis.ALL.json
[2025-07-21 19:30:30] drwx------. 4 boinc boinc      4096 Jul 21 19:26 pilot3
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc       968 Jul 21 19:27 memory_monitor_summary.json
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc     21704 Jul 21 19:27 log.45697453._001774.job.log.tgz.1
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc      8400 Jul 21 19:29 heartbeat.json
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc       524 Jul 21 19:30 boinc_task_state.xml
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc      8192 Jul 21 19:30 boinc_mmap_file
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc        22 Jul 21 19:30 wrapper_checkpoint.txt
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc        95 Jul 21 19:30 pilot_heartbeat.json
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc       822 Jul 21 19:30 pilotlog.txt
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc     78661 Jul 21 19:30 log.45697453._001774.job.log.1
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc       188 Jul 21 19:30 output.list
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc       620 Jul 21 19:30 runtime_log
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc    122880 Jul 21 19:30 result.tar.gz
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc      8485 Jul 21 19:30 runtime_log.err
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc       645 Jul 21 19:30 Gp2KDmWPGy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsfHLDmGEog6n.diag
[2025-07-21 19:30:30] -rw-r--r--. 1 boinc boinc     21744 Jul 21 19:30 stderr.txt
[2025-07-21 19:30:30] No HITS result produced
[2025-07-21 19:30:30]  *** Contents of shared directory: ***
[2025-07-21 19:30:30] total 309772
[2025-07-21 19:30:30] -rw-r--r--. 2 boinc boinc 316518875 Jul 21 19:25 ATLAS.root_0
[2025-07-21 19:30:30] -rw-r--r--. 2 boinc boinc     15095 Jul 21 19:25 start_atlas.sh
[2025-07-21 19:30:30] -rw-r--r--. 2 boinc boinc    542903 Jul 21 19:25 input.tar.gz
[2025-07-21 19:30:30] -rw-------. 1 boinc boinc    122880 Jul 21 19:30 result.tar.gz
19:30:32 (428954): run_atlas exited; CPU time 24.011557
19:30:32 (428954): called boinc_finish(0)

</stderr_txt>
]]>

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