Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:43:28 (3084768): wrapper (7.7.26015): starting
21:43:28 (3084768): wrapper: running run_atlas (--nthreads 8)
[2025-07-21 21:43:28] Arguments: --nthreads 8
[2025-07-21 21:43:28] Threads: 8
[2025-07-21 21:43:28] Checking for CVMFS
[2025-07-21 21:43:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 21:43:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 21:43:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 21:43:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 21:43:30] 2.12.6.0 1149533 10521 348060 148603 1 674 21508101 32935937 29222 16776704 1 30310308 99.352 57367589 19439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-21 21:43:30] CVMFS is ok
[2025-07-21 21:43:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 21:43:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 21:43:30] Further information can be found at the LHC@home message board.
[2025-07-21 21:43:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 21:43:30] Checking for apptainer binary...
[2025-07-21 21:43:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 21:43:30] Running /usr/bin/apptainer --version
[2025-07-21 21:43:30] apptainer version 1.4.1-1.el9
[2025-07-21 21:43:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 21:43:31] c6-2-11-4.aglt2.org
[2025-07-21 21:43:31] apptainer works
[2025-07-21 21:43:31] Set ATHENA_PROC_NUMBER=8
[2025-07-21 21:43:31] Set ATHENA_CORE_NUMBER=8
[2025-07-21 21:43:31] Starting ATLAS job with PandaID=6741688406
[2025-07-21 21:43:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 02:34:30]  *** The last 200 lines of the pilot log: ***
[2025-07-22 02:34:30] 2025-07-22 06:33:50,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 02:34:30] 2025-07-22 06:33:50,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 02:34:30] 2025-07-22 06:33:50,764 | INFO     | fitting pss+swap vs Time
[2025-07-22 02:34:30] 2025-07-22 06:33:50,764 | INFO     | sum of square deviations: 6880235072.612095
[2025-07-22 02:34:30] 2025-07-22 06:33:50,778 | INFO     | sum of deviations: 95188105066.13162
[2025-07-22 02:34:30] 2025-07-22 06:33:50,779 | INFO     | mean x: 1753157389.2099645
[2025-07-22 02:34:30] 2025-07-22 06:33:50,779 | INFO     | mean y: 2119959.1672597863
[2025-07-22 02:34:30] 2025-07-22 06:33:50,779 | INFO     | -- intersect: -24252825983.868217
[2025-07-22 02:34:30] 2025-07-22 06:33:50,779 | INFO     | intersect: -24252825983.868217
[2025-07-22 02:34:30] 2025-07-22 06:33:50,779 | INFO     | chi2: 3.8082864018203066
[2025-07-22 02:34:30] 2025-07-22 06:33:50,780 | INFO     | sum of square deviations: 6519449595.228291
[2025-07-22 02:34:30] 2025-07-22 06:33:50,793 | INFO     | sum of deviations: 109765448892.02165
[2025-07-22 02:34:30] 2025-07-22 06:33:50,793 | INFO     | mean x: 1753157236.7065217
[2025-07-22 02:34:30] 2025-07-22 06:33:50,793 | INFO     | mean y: 2126031.8768115942
[2025-07-22 02:34:30] 2025-07-22 06:33:50,793 | INFO     | -- intersect: -29515103644.419064
[2025-07-22 02:34:30] 2025-07-22 06:33:50,794 | INFO     | intersect: -29515103644.419064
[2025-07-22 02:34:30] 2025-07-22 06:33:50,794 | INFO     | chi2: 3.1392912247583955
[2025-07-22 02:34:30] 2025-07-22 06:33:50,794 | INFO     | current chi2=3.1392912247583955 (change=17.566829447022183 %)
[2025-07-22 02:34:30] 2025-07-22 06:33:50,794 | INFO     | right removable region: 275
[2025-07-22 02:34:30] 2025-07-22 06:33:50,795 | INFO     | sum of square deviations: 6519447522.387695
[2025-07-22 02:34:30] 2025-07-22 06:33:50,807 | INFO     | sum of deviations: 34719365003.452866
[2025-07-22 02:34:30] 2025-07-22 06:33:50,807 | INFO     | mean x: 1753157541.713768
[2025-07-22 02:34:30] 2025-07-22 06:33:50,807 | INFO     | mean y: 2145451.170289855
[2025-07-22 02:34:30] 2025-07-22 06:33:50,807 | INFO     | -- intersect: -9334307736.05068
[2025-07-22 02:34:30] 2025-07-22 06:33:50,807 | INFO     | intersect: -9334307736.05068
[2025-07-22 02:34:30] 2025-07-22 06:33:50,808 | INFO     | chi2: 1.3668218116027888
[2025-07-22 02:34:30] 2025-07-22 06:33:50,808 | INFO     | current chi2=1.3668218116027888 (change=64.10926943547452 %)
[2025-07-22 02:34:30] 2025-07-22 06:33:50,808 | INFO     | sum of square deviations: 6171547806.427998
[2025-07-22 02:34:30] 2025-07-22 06:33:50,845 | INFO     | sum of deviations: 6120938546.741695
[2025-07-22 02:34:30] 2025-07-22 06:33:50,845 | INFO     | mean x: 1753157694.2066422
[2025-07-22 02:34:30] 2025-07-22 06:33:50,845 | INFO     | mean y: 2157979.254612546
[2025-07-22 02:34:30] 2025-07-22 06:33:50,846 | INFO     | -- intersect: -1736623092.4579563
[2025-07-22 02:34:30] 2025-07-22 06:33:50,846 | INFO     | intersect: -1736623092.4579563
[2025-07-22 02:34:30] 2025-07-22 06:33:50,846 | INFO     | chi2: 0.8845914031744193
[2025-07-22 02:34:30] 2025-07-22 06:33:50,846 | INFO     | current chi2=0.8845914031744193 (change=35.28114669628276 %)
[2025-07-22 02:34:30] 2025-07-22 06:33:50,847 | INFO     | sum of square deviations: 5836253099.939848
[2025-07-22 02:34:30] 2025-07-22 06:33:50,848 | INFO     | sum of deviations: -3829543554.6766872
[2025-07-22 02:34:30] 2025-07-22 06:33:50,849 | INFO     | mean x: 1753157846.699248
[2025-07-22 02:34:30] 2025-07-22 06:33:50,862 | INFO     | mean y: 2162482.6165413535
[2025-07-22 02:34:30] 2025-07-22 06:33:50,862 | INFO     | -- intersect: 1152522862.3312528
[2025-07-22 02:34:30] 2025-07-22 06:33:50,862 | INFO     | intersect: 1152522862.3312528
[2025-07-22 02:34:30] 2025-07-22 06:33:50,863 | INFO     | chi2: 0.8104291038070401
[2025-07-22 02:34:30] 2025-07-22 06:33:50,863 | INFO     | current chi2=0.8104291038070401 (change=8.38379155633239 %)
[2025-07-22 02:34:30] 2025-07-22 06:33:50,863 | INFO     | left removable region: 30
[2025-07-22 02:34:30] 2025-07-22 06:33:50,863 | INFO     | sum of square deviations: 4560231581.795931
[2025-07-22 02:34:30] 2025-07-22 06:33:50,865 | INFO     | sum of deviations: 9681154704.551014
[2025-07-22 02:34:30] 2025-07-22 06:33:50,865 | INFO     | mean x: 1753158121.2040815
[2025-07-22 02:34:30] 2025-07-22 06:33:50,865 | INFO     | mean y: 2171291.048979592
[2025-07-22 02:34:30] 2025-07-22 06:33:50,865 | INFO     | -- intersect: -3719699997.389509
[2025-07-22 02:34:30] 2025-07-22 06:33:50,865 | INFO     | intersect: -3719699997.389509
[2025-07-22 02:34:30] 2025-07-22 06:33:50,865 | INFO     | chi2: 0.12305228960498728
[2025-07-22 02:34:30] 2025-07-22 06:33:50,866 | INFO     | -- intersect: -3719699997.389509
[2025-07-22 02:34:30] 2025-07-22 06:33:50,879 | INFO     | current memory leak: 2.12 B/s (using 245 data points, chi2=0.12)
[2025-07-22 02:34:30] 2025-07-22 06:33:50,879 | INFO     | could have reported an average CPU frequency of 2683 MHz (13 samples)
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | ..............................
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | . Timing measurements:
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | . get job = 0 s
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | . initial setup = 6 s
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | . payload setup = 62 s
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | . stage-in = 0 s
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | . payload execution = 17169 s
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | . stage-out = 6 s
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | . log creation = 1 s
[2025-07-22 02:34:30] 2025-07-22 06:33:50,880 | INFO     | ..............................
[2025-07-22 02:34:30] 2025-07-22 06:33:52,208 | INFO     | 
[2025-07-22 02:34:30] 2025-07-22 06:33:52,241 | INFO     | job summary report
[2025-07-22 02:34:30] 2025-07-22 06:33:52,241 | INFO     | --------------------------------------------------
[2025-07-22 02:34:30] 2025-07-22 06:33:52,241 | INFO     | PanDA job id: 6741688406
[2025-07-22 02:34:30] 2025-07-22 06:33:52,241 | INFO     | task id: 45697523
[2025-07-22 02:34:30] 2025-07-22 06:33:52,241 | INFO     | errors: (none)
[2025-07-22 02:34:30] 2025-07-22 06:33:52,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 02:34:30] 2025-07-22 06:33:52,241 | INFO     | pilot state: finished 
[2025-07-22 02:34:30] 2025-07-22 06:33:52,241 | INFO     | transexitcode: 0
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | exeerrorcode: 0
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | exeerrordiag: 
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | exitcode: 0
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | exitmsg: OK
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | cpuconsumptiontime: 60879 s
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | nevents: 400
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | neventsw: 0
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | pid: 3100536
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | pgrp: 3100536
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | corecount: 8
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | event service: False
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | sizes: {0: 2397331, 1: 2397387, 2: 2397614, 3: 2397642, 14: 2397642, 25: 2397670, 32: 2398088, 36: 2398116, 17236: 2429946, 17244: 2438972, 17247: 2439028, 17283: 
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | --------------------------------------------------
[2025-07-22 02:34:30] 2025-07-22 06:33:52,242 | INFO     | 
[2025-07-22 02:34:30] 2025-07-22 06:33:52,243 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 02:34:30] 2025-07-22 06:33:52,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 02:34:30] 2025-07-22 06:33:52,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 02:34:30] 2025-07-22 06:33:52,389 | INFO     | job 6741688406 has completed (purged errors)
[2025-07-22 02:34:30] 2025-07-22 06:33:52,389 | INFO     | overall cleanup function is called
[2025-07-22 02:34:30] 2025-07-22 06:33:53,449 | INFO     | --- collectZombieJob: --- 10, [3100536]
[2025-07-22 02:34:30] 2025-07-22 06:33:53,449 | INFO     | zombie collector waiting for pid 3100536
[2025-07-22 02:34:30] 2025-07-22 06:33:53,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 02:34:30] 2025-07-22 06:33:53,449 | INFO     | collected zombie processes
[2025-07-22 02:34:30] 2025-07-22 06:33:53,449 | INFO     | will attempt to kill all subprocesses of pid=3100536
[2025-07-22 02:34:30] 2025-07-22 06:33:54,570 | INFO     | PID=3089553 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 02:34:30] 2025-07-22 06:33:54,570 | INFO     | .. there are 50 such processes running
[2025-07-22 02:34:30] 2025-07-22 06:33:56,005 | INFO     | process IDs to be killed: [3100536] (in reverse order)
[2025-07-22 02:34:30] 2025-07-22 06:33:56,840 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 02:34:30] 2025-07-22 06:33:56,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 02:34:30] 2025-07-22 06:33:56,954 | INFO     | did not find any defunct processes belonging to 3100536
[2025-07-22 02:34:30] 2025-07-22 06:33:57,026 | INFO     | did not find any defunct processes belonging to 3100536
[2025-07-22 02:34:30] 2025-07-22 06:33:57,026 | INFO     | ready for new job
[2025-07-22 02:34:30] 2025-07-22 06:33:57,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 02:34:30] 2025-07-22 06:33:57,028 | INFO     | ***************************************
[2025-07-22 02:34:30] 2025-07-22 06:33:57,028 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 02:34:30] 2025-07-22 06:33:57,028 | INFO     | ***************************************
[2025-07-22 02:34:30] 2025-07-22 06:33:57,028 | INFO     | 
[2025-07-22 02:34:30] 2025-07-22 06:33:57,073 | INFO     | architecture information:
[2025-07-22 02:34:30] 2025-07-22 06:33:57,077 | INFO     | executing command: cat /etc/os-release
[2025-07-22 02:34:30] 2025-07-22 06:33:57,160 | INFO     | cat /etc/os-release:
[2025-07-22 02:34:30] NAME="CentOS Linux"
[2025-07-22 02:34:30] VERSION="7 (Core)"
[2025-07-22 02:34:30] ID="centos"
[2025-07-22 02:34:30] ID_LIKE="rhel fedora"
[2025-07-22 02:34:30] VERSION_ID="7"
[2025-07-22 02:34:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 02:34:30] ANSI_COLOR="0;31"
[2025-07-22 02:34:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 02:34:30] HOME_URL="https://www.centos.org/"
[2025-07-22 02:34:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 02:34:30] 
[2025-07-22 02:34:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 02:34:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 02:34:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 02:34:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 02:34:30] 
[2025-07-22 02:34:30] 2025-07-22 06:33:57,160 | INFO     | ***************************************
[2025-07-22 02:34:30] 2025-07-22 06:33:57,664 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 02:34:30] 2025-07-22 06:33:57,810 | INFO     | sufficient remaining disk space (94506057728 B)
[2025-07-22 02:34:30] 2025-07-22 06:33:57,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 02:34:30] 2025-07-22 06:33:57,811 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 02:34:30] 2025-07-22 06:33:57,811 | INFO     | update_server=False
[2025-07-22 02:34:30] 2025-07-22 06:33:57,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 02:34:30] 2025-07-22 06:33:57,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 02:34:30] 2025-07-22 06:33:57,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 02:34:30] 2025-07-22 06:33:57,912 | INFO     | aborting loop
[2025-07-22 02:34:30] 2025-07-22 06:33:58,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 02:34:30] 2025-07-22 06:33:58,148 | INFO     | all job control threads have been joined
[2025-07-22 02:34:30] 2025-07-22 06:33:58,253 | INFO     | all data control threads have been joined
[2025-07-22 02:34:30] 2025-07-22 06:33:58,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 02:34:30] 2025-07-22 06:33:58,824 | INFO     | [job] queue monitor thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:58,824 | INFO     | [job] retrieve thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:58,848 | INFO     | all payload control threads have been joined
[2025-07-22 02:34:30] 2025-07-22 06:33:58,918 | INFO     | [job] job monitor thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:58,955 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:58,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:59,154 | INFO     | [job] control thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:59,259 | INFO     | [data] control thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:59,339 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:59,339 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:59,340 | INFO     | [job] validate thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:33:59,854 | INFO     | [payload] control thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:34:00,017 | INFO     | [data] copytool_in thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:34:00,097 | INFO     | [payload] validate_post thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:34:00,242 | INFO     | [payload] failed_post thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:34:00,274 | INFO     | [data] copytool_out thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:34:02,034 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 02:34:30] 2025-07-22 06:34:02,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140512932128576)>', '<ExcThread(monitor, started 140512447153920)>']
[2025-07-22 02:34:30] 2025-07-22 06:34:07,505 | INFO     | all workflow threads have been joined
[2025-07-22 02:34:30] 2025-07-22 06:34:07,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 02:34:30] 2025-07-22 06:34:07,506 | INFO     | traces error code: 0
[2025-07-22 02:34:30] 2025-07-22 06:34:07,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 02:34:30] 2025-07-22 06:34:29,311 | INFO     | PID=3089553 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 02:34:30] 2025-07-22 06:34:29,311 | INFO     | .. there are 50 such processes running
[2025-07-22 02:34:30] 2025-07-22 06:34:29,312 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 02:34:30] 2025-07-22 06:34:29,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 02:34:30] 2025-07-22 06:34:29,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 02:34:30] 2025-07-22 06:34:29,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 02:34:30] 2025-07-22 06:34:29,312 | INFO     | [monitor] control thread has ended
[2025-07-22 02:34:30] 2025-07-22 06:34:29,541 [wrapper] ==== pilot stdout END ====
[2025-07-22 02:34:30] 2025-07-22 06:34:29,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 02:34:30] 2025-07-22 06:34:29,618 [wrapper] pilotpid: 3089553
[2025-07-22 02:34:30] 2025-07-22 06:34:29,630 [wrapper] Pilot exit status: 0
[2025-07-22 02:34:30] 2025-07-22 06:34:29,727 [wrapper] pandaids: 6741688406
[2025-07-22 02:34:30] 2025-07-22 06:34:29,891 [wrapper] cleanup supervisor_pilot 4094599 3089554
[2025-07-22 02:34:30] 2025-07-22 06:34:29,912 [wrapper] Test setup, not cleaning
[2025-07-22 02:34:30] 2025-07-22 06:34:29,923 [wrapper] apfmon messages muted
[2025-07-22 02:34:30] 2025-07-22 06:34:29,936 [wrapper] ==== wrapper stdout END ====
[2025-07-22 02:34:30] 2025-07-22 06:34:29,947 [wrapper] ==== wrapper stderr END ====
[2025-07-22 02:34:30]  *** Error codes and diagnostics ***
[2025-07-22 02:34:30]     "exeErrorCode": 0,
[2025-07-22 02:34:30]     "exeErrorDiag": "",
[2025-07-22 02:34:30]     "pilotErrorCode": 0,
[2025-07-22 02:34:30]     "pilotErrorDiag": "",
[2025-07-22 02:34:30]  *** Listing of results directory ***
[2025-07-22 02:34:30] total 572548
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 16:41 pilot3.tar.gz
[2025-07-22 02:34:30] -rwx------. 1 boincer umatlas     36292 Jul 21 16:41 runpilot2-wrapper.sh
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 16:43 queuedata.json
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas       100 Jul 21 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 02:34:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 21 21:43 run_atlas
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas       105 Jul 21 21:43 job.xml
[2025-07-22 02:34:30] -rw-r--r--. 2 boincer umatlas 321277812 Jul 21 21:43 EVNT.45697521._000117.pool.root.1
[2025-07-22 02:34:30] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 21:43 start_atlas.sh
[2025-07-22 02:34:30] drwxrwx--x. 2 boincer umatlas      4096 Jul 21 21:43 shared
[2025-07-22 02:34:30] -rw-r--r--. 2 boincer umatlas    542895 Jul 21 21:43 input.tar.gz
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas         0 Jul 21 21:43 boinc_lockfile
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas      2631 Jul 21 21:43 pandaJob.out
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas    977318 Jul 21 21:44 agis_schedconf.cvmfs.json
[2025-07-22 02:34:30] drwx------. 4 boincer umatlas      4096 Jul 21 21:44 pilot3
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas      6854 Jul 22 02:28 init_data.xml
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas 257701250 Jul 22 02:31 HITS.45697523._003051.pool.root.1
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas       530 Jul 22 02:31 boinc_task_state.xml
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas      1044 Jul 22 02:33 memory_monitor_summary.json
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas   1593055 Jul 22 02:33 agis_ddmendpoints.agis.ALL.json
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas    400639 Jul 22 02:33 log.45697523._003051.job.log.tgz.1
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas        95 Jul 22 02:33 pilot_heartbeat.json
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas      7824 Jul 22 02:33 heartbeat.json
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 02:34 boinc_mmap_file
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas        28 Jul 22 02:34 wrapper_checkpoint.txt
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas       823 Jul 22 02:34 pilotlog.txt
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas   1320744 Jul 22 02:34 log.45697523._003051.job.log.1
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas       357 Jul 22 02:34 output.list
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas       620 Jul 22 02:34 runtime_log
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas   1740800 Jul 22 02:34 result.tar.gz
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas      8666 Jul 22 02:34 runtime_log.err
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas       658 Jul 22 02:34 0QWLDmaVCy7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7EtKDmCcLumn.diag
[2025-07-22 02:34:30] -rw-r--r--. 1 boincer umatlas     21159 Jul 22 02:34 stderr.txt
[2025-07-22 02:34:30] HITS file was successfully produced:
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas 257701250 Jul 22 02:31 shared/HITS.pool.root.1
[2025-07-22 02:34:30]  *** Contents of shared directory: ***
[2025-07-22 02:34:30] total 567664
[2025-07-22 02:34:30] -rw-r--r--. 2 boincer umatlas 321277812 Jul 21 21:43 ATLAS.root_0
[2025-07-22 02:34:30] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 21:43 start_atlas.sh
[2025-07-22 02:34:30] -rw-r--r--. 2 boincer umatlas    542895 Jul 21 21:43 input.tar.gz
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas 257701250 Jul 22 02:31 HITS.pool.root.1
[2025-07-22 02:34:30] -rw-------. 1 boincer umatlas   1740800 Jul 22 02:34 result.tar.gz
02:34:32 (3084768): run_atlas exited; CPU time 61675.802567
02:34:32 (3084768): called boinc_finish(0)

</stderr_txt>
]]>

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