Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:45:09 (15889): wrapper (7.7.26015): starting
03:45:09 (15889): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 03:45:09] Arguments: --nthreads 8
[2025-07-22 03:45:09] Threads: 8
[2025-07-22 03:45:09] Checking for CVMFS
[2025-07-22 03:45:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 03:45:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 03:45:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 03:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 03:45:11] 2.11.2.0 25230 101694 109584 148603 1 112 16377290 25165825 2547 130560 0 63438002 99.836 51547406 3511 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-22 03:45:11] CVMFS is ok
[2025-07-22 03:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 03:45:11] Checking for apptainer binary...
[2025-07-22 03:45:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 03:45:11] Running /usr/bin/apptainer --version
[2025-07-22 03:45:11] apptainer version 1.3.2-1.el7
[2025-07-22 03:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 03:45:12] cg-vwn359.simple-grid.lan
[2025-07-22 03:45:12] apptainer works
[2025-07-22 03:45:12] Set ATHENA_PROC_NUMBER=8
[2025-07-22 03:45:12] Set ATHENA_CORE_NUMBER=8
[2025-07-22 03:45:12] Starting ATLAS job with PandaID=6741825055
[2025-07-22 03:45:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 11:17:41]  *** The last 200 lines of the pilot log: ***
[2025-07-22 11:17:41] 2025-07-22 07:09:26,402 | INFO     | monitor loop #1344: job 0:6741825055 is in state 'finished'
[2025-07-22 11:17:41] 2025-07-22 07:09:26,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,275 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-22 11:17:41] 2025-07-22 07:09:27,276 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-22 11:17:41] 2025-07-22 07:09:27,277 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6741825055/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,278 | INFO     | extracted standard info from prmon json
[2025-07-22 11:17:41] 2025-07-22 07:09:27,278 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 11:17:41] 2025-07-22 07:09:27,278 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 11:17:41] 2025-07-22 07:09:27,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 11:17:41] 2025-07-22 07:09:27,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 11:17:41] 2025-07-22 07:09:27,294 | INFO     | fitting pss+swap vs Time
[2025-07-22 11:17:41] 2025-07-22 07:09:27,295 | INFO     | sum of square deviations: 9784425315.0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,298 | INFO     | sum of deviations: 69248702704.50002
[2025-07-22 11:17:41] 2025-07-22 07:09:27,298 | INFO     | mean x: 1753158401.5
[2025-07-22 11:17:41] 2025-07-22 07:09:27,298 | INFO     | mean y: 2533552.338607595
[2025-07-22 11:17:41] 2025-07-22 07:09:27,298 | INFO     | -- intersect: -12405343357.228254
[2025-07-22 11:17:41] 2025-07-22 07:09:27,298 | INFO     | intersect: -12405343357.228254
[2025-07-22 11:17:41] 2025-07-22 07:09:27,299 | INFO     | chi2: 3.2313873763806527
[2025-07-22 11:17:41] 2025-07-22 07:09:27,299 | INFO     | sum of square deviations: 9327281860.0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,302 | INFO     | sum of deviations: 89306991012.99998
[2025-07-22 11:17:41] 2025-07-22 07:09:27,302 | INFO     | mean x: 1753158249.0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,302 | INFO     | mean y: 2540151.4758842443
[2025-07-22 11:17:41] 2025-07-22 07:09:27,303 | INFO     | -- intersect: -16783624385.832287
[2025-07-22 11:17:41] 2025-07-22 07:09:27,303 | INFO     | intersect: -16783624385.832287
[2025-07-22 11:17:41] 2025-07-22 07:09:27,303 | INFO     | chi2: 2.465064462716644
[2025-07-22 11:17:41] 2025-07-22 07:09:27,303 | INFO     | current chi2=2.465064462716644 (change=23.71498135028107 %)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,303 | INFO     | right removable region: 310
[2025-07-22 11:17:41] 2025-07-22 07:09:27,304 | INFO     | sum of square deviations: 9327281860.0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,307 | INFO     | sum of deviations: -6519980607.999998
[2025-07-22 11:17:41] 2025-07-22 07:09:27,307 | INFO     | mean x: 1753158554.0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,307 | INFO     | mean y: 2558735.418006431
[2025-07-22 11:17:41] 2025-07-22 07:09:27,307 | INFO     | -- intersect: 1228056146.8181286
[2025-07-22 11:17:41] 2025-07-22 07:09:27,307 | INFO     | intersect: 1228056146.8181286
[2025-07-22 11:17:41] 2025-07-22 07:09:27,308 | INFO     | chi2: 0.9228384332019286
[2025-07-22 11:17:41] 2025-07-22 07:09:27,308 | INFO     | current chi2=0.9228384332019286 (change=71.4414173940494 %)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,308 | INFO     | sum of square deviations: 8884603792.5
[2025-07-22 11:17:41] 2025-07-22 07:09:27,328 | INFO     | sum of deviations: -19896541898.0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,329 | INFO     | mean x: 1753158706.5
[2025-07-22 11:17:41] 2025-07-22 07:09:27,329 | INFO     | mean y: 2563327.6535947714
[2025-07-22 11:17:41] 2025-07-22 07:09:27,329 | INFO     | -- intersect: 3928658004.7360377
[2025-07-22 11:17:41] 2025-07-22 07:09:27,329 | INFO     | intersect: 3928658004.7360377
[2025-07-22 11:17:41] 2025-07-22 07:09:27,329 | INFO     | chi2: 0.8503536579755632
[2025-07-22 11:17:41] 2025-07-22 07:09:27,330 | INFO     | current chi2=0.8503536579755632 (change=7.854546648525296 %)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,330 | INFO     | left removable region: 20
[2025-07-22 11:17:41] 2025-07-22 07:09:27,330 | INFO     | sum of square deviations: 7562532492.5
[2025-07-22 11:17:41] 2025-07-22 07:09:27,333 | INFO     | sum of deviations: 14863652839.999998
[2025-07-22 11:17:41] 2025-07-22 07:09:27,333 | INFO     | mean x: 1753158828.5
[2025-07-22 11:17:41] 2025-07-22 07:09:27,333 | INFO     | mean y: 2565287.206896552
[2025-07-22 11:17:41] 2025-07-22 07:09:27,333 | INFO     | -- intersect: -3443151372.6617346
[2025-07-22 11:17:41] 2025-07-22 07:09:27,333 | INFO     | intersect: -3443151372.6617346
[2025-07-22 11:17:41] 2025-07-22 07:09:27,334 | INFO     | chi2: 0.005610964374441057
[2025-07-22 11:17:41] 2025-07-22 07:09:27,334 | INFO     | -- intersect: -3443151372.6617346
[2025-07-22 11:17:41] 2025-07-22 07:09:27,334 | INFO     | current memory leak: 1.97 B/s (using 290 data points, chi2=0.01)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | ..............................
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | . Timing measurements:
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | . get job = 0 s
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | . initial setup = 2 s
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | . payload setup = 16 s
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | . stage-in = 0 s
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | . payload execution = 19294 s
[2025-07-22 11:17:41] 2025-07-22 07:09:27,335 | INFO     | . stage-out = 3 s
[2025-07-22 11:17:41] 2025-07-22 07:09:27,336 | INFO     | . log creation = 1 s
[2025-07-22 11:17:41] 2025-07-22 07:09:27,336 | INFO     | ..............................
[2025-07-22 11:17:41] 2025-07-22 07:09:27,484 | INFO     | 
[2025-07-22 11:17:41] 2025-07-22 07:09:27,484 | INFO     | job summary report
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | --------------------------------------------------
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | PanDA job id: 6741825055
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | task id: 45697532
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | errors: (none)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | pilot state: finished 
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | transexitcode: 0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | exeerrorcode: 0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | exeerrordiag: 
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | exitcode: 0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | exitmsg: OK
[2025-07-22 11:17:41] 2025-07-22 07:09:27,485 | INFO     | cpuconsumptiontime: 75448 s
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | nevents: 400
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | neventsw: 0
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | pid: 26533
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | pgrp: 26533
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | corecount: 8
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | event service: False
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | sizes: {0: 2397547, 9: 2397809, 11: 2397837, 19315: 2430224, 19320: 2439224, 19321: 2439280, 19413: 2439602}
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | --------------------------------------------------
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | 
[2025-07-22 11:17:41] 2025-07-22 07:09:27,486 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-07-22 11:17:41] 2025-07-22 07:09:27,900 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,900 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,900 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,900 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 11:17:41] 2025-07-22 07:09:27,902 | INFO     | job 6741825055 has completed (purged errors)
[2025-07-22 11:17:41] 2025-07-22 07:09:27,902 | INFO     | overall cleanup function is called
[2025-07-22 11:17:41] 2025-07-22 07:09:28,911 | INFO     | --- collectZombieJob: --- 10, [26533]
[2025-07-22 11:17:41] 2025-07-22 07:09:28,911 | INFO     | zombie collector waiting for pid 26533
[2025-07-22 11:17:41] 2025-07-22 07:09:28,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 11:17:41] 2025-07-22 07:09:28,912 | INFO     | collected zombie processes
[2025-07-22 11:17:41] 2025-07-22 07:09:28,912 | INFO     | will attempt to kill all subprocesses of pid=26533
[2025-07-22 11:17:41] 2025-07-22 07:09:29,033 | INFO     | process IDs to be killed: [26533] (in reverse order)
[2025-07-22 11:17:41] 2025-07-22 07:09:29,872 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 11:17:41] 2025-07-22 07:09:29,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 11:17:41] 2025-07-22 07:09:29,879 | INFO     | did not find any defunct processes belonging to 26533
[2025-07-22 11:17:41] 2025-07-22 07:09:29,882 | INFO     | did not find any defunct processes belonging to 26533
[2025-07-22 11:17:41] 2025-07-22 07:09:29,882 | INFO     | ready for new job
[2025-07-22 11:17:41] 2025-07-22 07:09:29,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 11:17:41] 2025-07-22 07:09:29,884 | INFO     | ***************************************
[2025-07-22 11:17:41] 2025-07-22 07:09:29,884 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 11:17:41] 2025-07-22 07:09:29,884 | INFO     | ***************************************
[2025-07-22 11:17:41] 2025-07-22 07:09:29,884 | INFO     | 
[2025-07-22 11:17:41] 2025-07-22 07:09:29,885 | INFO     | pilot is running in a VM
[2025-07-22 11:17:41] 2025-07-22 07:09:29,885 | INFO     | architecture information:
[2025-07-22 11:17:41] 2025-07-22 07:09:29,900 | INFO     | executing command: cat /etc/os-release
[2025-07-22 11:17:41] 2025-07-22 07:09:30,007 | INFO     | cat /etc/os-release:
[2025-07-22 11:17:41] NAME="CentOS Linux"
[2025-07-22 11:17:41] VERSION="7 (Core)"
[2025-07-22 11:17:41] ID="centos"
[2025-07-22 11:17:41] ID_LIKE="rhel fedora"
[2025-07-22 11:17:41] VERSION_ID="7"
[2025-07-22 11:17:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 11:17:41] ANSI_COLOR="0;31"
[2025-07-22 11:17:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 11:17:41] HOME_URL="https://www.centos.org/"
[2025-07-22 11:17:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 11:17:41] 
[2025-07-22 11:17:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 11:17:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 11:17:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 11:17:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 11:17:41] 
[2025-07-22 11:17:41] 2025-07-22 07:09:30,008 | INFO     | ***************************************
[2025-07-22 11:17:41] 2025-07-22 07:09:30,511 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-07-22 11:17:41] 2025-07-22 07:09:30,681 | INFO     | sufficient remaining disk space (497235787776 B)
[2025-07-22 11:17:41] 2025-07-22 07:09:30,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 11:17:41] 2025-07-22 07:09:30,681 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 11:17:41] 2025-07-22 07:09:30,681 | INFO     | update_server=False
[2025-07-22 11:17:41] 2025-07-22 07:09:30,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 11:17:41] 2025-07-22 07:09:30,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 11:17:41] 2025-07-22 07:09:30,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:17:41] 2025-07-22 07:09:30,690 | INFO     | aborting loop
[2025-07-22 11:17:41] 2025-07-22 07:09:30,907 | INFO     | all data control threads have been joined
[2025-07-22 11:17:41] 2025-07-22 07:09:31,548 | INFO     | all payload control threads have been joined
[2025-07-22 11:17:41] 2025-07-22 07:09:31,687 | INFO     | [job] retrieve thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:31,695 | INFO     | [job] job monitor thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:31,708 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:31,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 11:17:41] 2025-07-22 07:09:31,716 | INFO     | [payload] failed_post thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:31,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:31,913 | INFO     | [data] control thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:32,113 | INFO     | all job control threads have been joined
[2025-07-22 11:17:41] 2025-07-22 07:09:32,132 | INFO     | [job] validate thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:32,270 | INFO     | [payload] validate_post thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:32,427 | INFO     | [data] copytool_in thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:32,488 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:32,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 11:17:41] 2025-07-22 07:09:32,554 | INFO     | [payload] control thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:32,689 | INFO     | [data] copytool_out thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:32,844 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:33,119 | INFO     | [job] control thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:33,503 | INFO     | [job] queue monitor thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:35,718 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 11:17:41] 2025-07-22 07:09:37,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707444479808)>', '<ExcThread(monitor, started 140707012536064)>']
[2025-07-22 11:17:41] 2025-07-22 07:09:42,783 | INFO     | all workflow threads have been joined
[2025-07-22 11:17:41] 2025-07-22 07:09:42,783 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 11:17:41] 2025-07-22 07:09:42,784 | INFO     | traces error code: 0
[2025-07-22 11:17:41] 2025-07-22 07:09:42,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 11:17:41] 2025-07-22 07:09:58,724 | INFO     | 19437s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-22 11:17:41] 2025-07-22 07:09:59,884 | INFO     | PID=19881 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-22 11:17:41] 2025-07-22 07:09:59,884 | INFO     | .. there are 9 such processes running
[2025-07-22 11:17:41] 2025-07-22 07:09:59,884 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 11:17:41] 2025-07-22 07:09:59,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 11:17:41] 2025-07-22 07:09:59,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 11:17:41] 2025-07-22 07:09:59,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 11:17:41] 2025-07-22 07:09:59,885 | INFO     | [monitor] control thread has ended
[2025-07-22 11:17:41] 2025-07-22 07:10:00,111 [wrapper] ==== pilot stdout END ====
[2025-07-22 11:17:41] 2025-07-22 07:10:00,237 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 11:17:41] 2025-07-22 07:10:00,347 [wrapper] pilotpid: 19881
[2025-07-22 11:17:41] 2025-07-22 07:10:00,445 [wrapper] Pilot exit status: 0
[2025-07-22 11:17:41] 2025-07-22 07:10:00,658 [wrapper] pandaids: 6741825055
[2025-07-22 11:17:41] 2025-07-22 07:10:00,798 [wrapper] cleanup supervisor_pilot  9283 19882
[2025-07-22 11:17:41] 2025-07-22 07:10:00,946 [wrapper] Test setup, not cleaning
[2025-07-22 11:17:41] 2025-07-22 07:10:01,060 [wrapper] apfmon messages muted
[2025-07-22 11:17:41] 2025-07-22 07:10:01,150 [wrapper] ==== wrapper stdout END ====
[2025-07-22 11:17:41] 2025-07-22 07:10:01,246 [wrapper] ==== wrapper stderr END ====
[2025-07-22 11:17:41]  *** Error codes and diagnostics ***
[2025-07-22 11:17:41]     "exeErrorCode": 0,
[2025-07-22 11:17:41]     "exeErrorDiag": "",
[2025-07-22 11:17:41]     "pilotErrorCode": 0,
[2025-07-22 11:17:41]     "pilotErrorDiag": "",
[2025-07-22 11:17:41]  *** Listing of results directory ***
[2025-07-22 11:17:41] total 597156
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc    530466 Jul 22 01:55 pilot3.tar.gz
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc      5112 Jul 22 02:04 queuedata.json
[2025-07-22 11:17:41] -rwx------. 1 boinc boinc     36292 Jul 22 02:05 runpilot2-wrapper.sh
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc       100 Jul 22 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 11:17:41] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 03:45 run_atlas
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc       105 Jul 22 03:45 job.xml
[2025-07-22 11:17:41] -rw-r--r--. 2 boinc boinc 329140035 Jul 22 03:45 EVNT.45697530._000150.pool.root.1
[2025-07-22 11:17:41] -rw-r--r--. 2 boinc boinc     15095 Jul 22 03:45 start_atlas.sh
[2025-07-22 11:17:41] drwxrwx--x. 2 boinc boinc        68 Jul 22 03:45 shared
[2025-07-22 11:17:41] -rw-r--r--. 2 boinc boinc    542904 Jul 22 03:45 input.tar.gz
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc      6392 Jul 22 03:45 init_data.xml
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc         0 Jul 22 03:45 boinc_lockfile
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc      2612 Jul 22 03:45 pandaJob.out
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc    977318 Jul 22 03:45 agis_schedconf.cvmfs.json
[2025-07-22 11:17:41] drwx------. 4 boinc boinc      4096 Jul 22 03:45 pilot3
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc 274244205 Jul 22 09:06 HITS.45697532._003735.pool.root.1
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc       531 Jul 22 09:06 boinc_task_state.xml
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc      1018 Jul 22 09:07 memory_monitor_summary.json
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc   1593055 Jul 22 09:07 agis_ddmendpoints.agis.ALL.json
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc    433170 Jul 22 09:07 log.45697532._003735.job.log.tgz.1
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc        95 Jul 22 09:09 pilot_heartbeat.json
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc      7774 Jul 22 09:09 heartbeat.json
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc       936 Jul 22 09:09 pilotlog.txt
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc   1688575 Jul 22 09:10 log.45697532._003735.job.log.1
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc       357 Jul 22 09:10 output.list
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc       620 Jul 22 09:10 runtime_log
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc   2140160 Jul 22 09:10 result.tar.gz
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc      8674 Jul 22 09:10 runtime_log.err
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc       657 Jul 22 09:10 7itMDmVgFy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1SHLDmCh4zAo.diag
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc      8192 Jul 22 11:17 boinc_mmap_file
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc        28 Jul 22 11:17 wrapper_checkpoint.txt
[2025-07-22 11:17:41] -rw-r--r--. 1 boinc boinc     20814 Jul 22 11:17 stderr.txt
[2025-07-22 11:17:41] HITS file was successfully produced:
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc 274244205 Jul 22 09:06 shared/HITS.pool.root.1
[2025-07-22 11:17:41]  *** Contents of shared directory: ***
[2025-07-22 11:17:41] total 591888
[2025-07-22 11:17:41] -rw-r--r--. 2 boinc boinc 329140035 Jul 22 03:45 ATLAS.root_0
[2025-07-22 11:17:41] -rw-r--r--. 2 boinc boinc     15095 Jul 22 03:45 start_atlas.sh
[2025-07-22 11:17:41] -rw-r--r--. 2 boinc boinc    542904 Jul 22 03:45 input.tar.gz
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc 274244205 Jul 22 09:06 HITS.pool.root.1
[2025-07-22 11:17:41] -rw-------. 1 boinc boinc   2140160 Jul 22 09:10 result.tar.gz
11:17:43 (15889): run_atlas exited; CPU time 75680.014153
11:17:43 (15889): called boinc_finish(0)

</stderr_txt>
]]>

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