Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-25 05:24:42 (16456): Detected: vboxwrapper 26206
2025-07-25 05:24:42 (16456): Detected: BOINC client v7.22.2
2025-07-25 05:24:43 (16456): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-25 05:24:43 (16456): Successfully copied 'init_data.xml' to the shared directory.
2025-07-25 05:24:44 (16456): Create VM. (boinc_0eefa058ce5c45fc, slot#11)
2025-07-25 05:24:45 (16456): Setting Memory Size for VM. (4700MB)
2025-07-25 05:24:45 (16456): Setting CPU Count for VM. (7)
2025-07-25 05:24:45 (16456): Setting Chipset Options for VM.
2025-07-25 05:24:46 (16456): Setting Graphics Controller Options for VM.
2025-07-25 05:24:46 (16456): Setting Boot Options for VM.
2025-07-25 05:24:46 (16456): Setting Network Configuration for NAT.
2025-07-25 05:24:47 (16456): Enabling VM Network Access.
2025-07-25 05:24:47 (16456): Disabling USB Support for VM.
2025-07-25 05:24:47 (16456): Disabling COM Port Support for VM.
2025-07-25 05:24:48 (16456): Disabling LPT Port Support for VM.
2025-07-25 05:24:48 (16456): Disabling Audio Support for VM.
2025-07-25 05:24:48 (16456): Disabling Clipboard Support for VM.
2025-07-25 05:24:49 (16456): Disabling Drag and Drop Support for VM.
2025-07-25 05:24:49 (16456): Adding storage controller(s) to VM.
2025-07-25 05:24:49 (16456): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-25 05:24:53 (16456): Adding VirtualBox Guest Additions to VM.
2025-07-25 05:24:53 (16456): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-25 05:24:53 (16456): forwarding host port 59178 to guest port 80
2025-07-25 05:24:54 (16456): Enabling remote desktop for VM.
2025-07-25 05:24:54 (16456): Required extension pack not installed, remote desktop not enabled.
2025-07-25 05:24:54 (16456): Enabling shared directory for VM.
2025-07-25 05:24:55 (16456): Starting VM using VBoxManage interface. (boinc_0eefa058ce5c45fc, slot#11)
2025-07-25 05:25:06 (16456): Successfully started VM. (PID = '11924')
2025-07-25 05:25:06 (16456): Reporting VM Process ID to BOINC.
2025-07-25 05:25:06 (16456): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-25 05:25:06 (16456): Guest Log: CPUID EDX: 0x178bfbff
2025-07-25 05:25:06 (16456): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-25 05:25:06 (16456): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-25 05:25:06 (16456): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-25 05:25:06 (16456): Detected: Web Application Enabled (http://localhost:59178)
2025-07-25 05:25:06 (16456): Preference change detected
2025-07-25 05:25:06 (16456): Setting CPU throttle for VM. (75%)
2025-07-25 05:25:06 (16456): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-25 05:25:08 (16456): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-25 05:25:08 (16456): Guest Log: BIOS: Booting from Hard Disk...
2025-07-25 05:25:13 (16456): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-25 05:25:13 (16456): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-25 05:25:13 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-25 05:25:29 (16456): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-25 05:25:29 (16456): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-25 05:26:03 (16456): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-25 05:26:03 (16456): Guest Log: 00:00:00.000395 main     Log opened 2025-07-25T05:26:01.379583000Z
2025-07-25 05:26:03 (16456): Guest Log: 00:00:00.000693 main     OS Product: Linux
2025-07-25 05:26:03 (16456): Guest Log: 00:00:00.000780 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-25 05:26:03 (16456): Guest Log: 00:00:00.000872 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-25 05:26:03 (16456): Guest Log: 00:00:00.000969 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-25 05:26:03 (16456): Guest Log: 00:00:00.000972 main     Process ID: 1317
2025-07-25 05:26:03 (16456): Guest Log: 00:00:00.000990 main     Package type: LINUX_64BITS_GENERIC
2025-07-25 05:26:03 (16456): Guest Log: 00:00:00.004914 main     5.2.32 r132073 started. Verbose level = 0
2025-07-25 05:26:03 (16456): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-25 05:26:03 (16456): Guest Log: [INFO] Mounting shared directory
2025-07-25 05:26:04 (16456): Guest Log: [INFO] Checking for init_data.xml
2025-07-25 05:26:13 (16456): Guest Log: 00:00:10.017881 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 384 466 000ns (GuestNow=1 753 435 572 774 379 000 ns GuestLast=1 753 421 161 389 913 000 ns fSetTimeLastLoop=true )
2025-07-25 05:26:15 (16456): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-25 05:26:15 (16456): Guest Log: [INFO] Detected branch: prod
2025-07-25 05:26:16 (16456): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-25 05:26:16 (16456): Guest Log: Copying input files
2025-07-25 05:26:25 (16456): Guest Log: Copied input files into RunAtlas.
2025-07-25 05:26:25 (16456): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-25 05:26:25 (16456): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-25 05:26:25 (16456): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-25 05:26:25 (16456): Guest Log: Further information can be found at the LHC@home message board.
2025-07-25 05:26:39 (16456): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-25 05:26:40 (16456): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-25 05:26:40 (16456): Guest Log: 2.6.3.0 1618 0 31952 148735 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-25 05:26:45 (16456): Guest Log: copied the webapp to /var/www
2025-07-25 05:26:45 (16456): Guest Log: ATHENA_PROC_NUMBER=7
2025-07-25 05:26:45 (16456): Guest Log: ATHENA_CORE_NUMBER=7
2025-07-25 05:26:46 (16456): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-25 05:26:46 (16456): Guest Log:  *** Starting ATLAS job. (PandaID=6741825028 taskID=45697532) ***
2025-07-25 05:39:40 (16456): Guest Log:  *** Job finished ***
2025-07-25 05:39:40 (16456): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:19,449 | INFO     | all workflow threads have been joined
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:19,450 | INFO     | end of generic workflow (traces error code: 0)
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:19,451 | INFO     | traces error code: 0
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:19,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:36,960 | INFO     | PID=5970 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:36,962 | INFO     | found 0 job(s) in 20 queues
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:36,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:36,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:36,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:36,963 | INFO     | [monitor] control thread has ended
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,415 [wrapper] ==== pilot stdout END ====
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,446 [wrapper] ==== wrapper stdout RESUME ====
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,471 [wrapper] pilotpid: 5970
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,499 [wrapper] Pilot exit status: 0
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,700 [wrapper] pandaids: 6741825028
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,861 [wrapper] cleanup supervisor_pilot  5976 5971
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,887 [wrapper] Test setup, not cleaning
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,911 [wrapper] apfmon messages muted
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,937 [wrapper] ==== wrapper stdout END ====
2025-07-25 05:39:40 (16456): Guest Log: 2025-07-25 09:39:37,961 [wrapper] ==== wrapper stderr END ====
2025-07-25 05:39:40 (16456): Guest Log:  *** Error codes and diagnostics ***
2025-07-25 05:39:40 (16456): Guest Log:     "exeErrorCode": 65,
2025-07-25 05:39:40 (16456): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-07-25 05:39:40 (16456): Guest Log:     "pilotErrorCode": 1305,
2025-07-25 05:39:40 (16456): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-07-25 05:39:40 (16456): Guest Log:  *** Listing of results directory ***
2025-07-25 05:39:40 (16456): Guest Log: total 4168
2025-07-25 05:39:40 (16456): Guest Log: -rw-r--r--. 1 atlas atlas  530466 Jul 21 23:55 pilot3.tar.gz
2025-07-25 05:39:40 (16456): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Jul 22 00:04 queuedata.json
2025-07-25 05:39:40 (16456): Guest Log: -rwx------. 1 atlas atlas   36292 Jul 22 00:05 runpilot2-wrapper.sh
2025-07-25 05:39:40 (16456): Guest Log: -rwxr-xr-x. 1 atlas atlas    6096 Jul 25 09:26 init_data.xml
2025-07-25 05:39:40 (16456): Guest Log: -rwxr-xr-x. 1 atlas atlas  542898 Jul 25 09:26 input.tar.gz
2025-07-25 05:39:40 (16456): Guest Log: -rwxr-xr-x. 1 atlas atlas   15095 Jul 25 09:26 start_atlas.sh
2025-07-25 05:39:40 (16456): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jul 25 09:26 EVNT.45697530._000149.pool.root.1 -> /data/./ATLAS.root_0
2025-07-25 05:39:40 (16456): Guest Log: -rw-r--r--. 1 atlas atlas    2612 Jul 25 09:26 pandaJob.out
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas  979709 Jul 25 09:28 agis_schedconf.cvmfs.json
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas 1593052 Jul 25 09:28 agis_ddmendpoints.agis.ALL.json
2025-07-25 05:39:40 (16456): Guest Log: drwx------. 4 atlas atlas    4096 Jul 25 09:28 pilot3
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas   51195 Jul 25 09:36 log.45697532._003708.job.log.tgz.1
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas    8180 Jul 25 09:39 heartbeat.json
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas      95 Jul 25 09:39 pilot_heartbeat.json
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas     744 Jul 25 09:39 pilotlog.txt
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas  184148 Jul 25 09:39 log.45697532._003708.job.log.1
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas     188 Jul 25 09:39 output.list
2025-07-25 05:39:40 (16456): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jul 25 09:39 runtime_log
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas  256000 Jul 25 09:39 result.tar.gz
2025-07-25 05:39:40 (16456): Guest Log: -rw-r--r--. 1 atlas atlas    8449 Jul 25 09:39 runtime_log.err
2025-07-25 05:39:40 (16456): Guest Log: -rw-------. 1 atlas atlas     647 Jul 25 09:39 i1qLDmVgFy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbSHLDm5MYsSn.diag
2025-07-25 05:39:40 (16456): Guest Log: Looking for outputfile HITS.45697532._003708.pool.root.1
2025-07-25 05:39:40 (16456): Guest Log: No HITS file was produced
2025-07-25 05:39:40 (16456): Guest Log: Successfully finished the ATLAS job!
2025-07-25 05:39:40 (16456): Guest Log: Copying the results back to the shared directory!
2025-07-25 05:39:40 (16456): Guest Log:  *** Contents of shared directory: ***
2025-07-25 05:39:40 (16456): Guest Log: total 325240
2025-07-25 05:39:40 (16456): Guest Log: -rwxrwxrwx. 1 root root 332216124 Jul 25 09:24 ATLAS.root_0
2025-07-25 05:39:40 (16456): Guest Log: -rwxrwxrwx. 1 root root      6096 Jul 25 09:24 init_data.xml
2025-07-25 05:39:40 (16456): Guest Log: -rwxrwxrwx. 1 root root    542898 Jul 22 01:08 input.tar.gz
2025-07-25 05:39:40 (16456): Guest Log: -rwxrwxrwx. 1 root root    256000 Jul 25 09:39 result.tar.gz
2025-07-25 05:39:40 (16456): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 22 01:08 start_atlas.sh
2025-07-25 05:39:40 (16456): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-25 05:39:40 (16456): VM Completion File Detected.
2025-07-25 05:39:40 (16456): Powering off VM.
2025-07-25 05:39:42 (16456): Successfully stopped VM.
2025-07-25 05:39:42 (16456): Deregistering VM. (boinc_0eefa058ce5c45fc, slot#11)
2025-07-25 05:39:42 (16456): Removing network bandwidth throttle group from VM.
2025-07-25 05:39:42 (16456): Removing VM from VirtualBox.
05:39:47 (16456): called boinc_finish(0)

</stderr_txt>
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