Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:38:12 (2500828): wrapper (7.7.26015): starting
05:38:12 (2500828): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 05:38:12] Arguments: --nthreads 4
[2025-07-26 05:38:12] Threads: 4
[2025-07-26 05:38:12] Checking for CVMFS
[2025-07-26 05:38:12] No cvmfs_config command found, will try listing directly
[2025-07-26 05:38:12] CVMFS is ok
[2025-07-26 05:38:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 05:38:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 05:38:12] Further information can be found at the LHC@home message board.
[2025-07-26 05:38:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 05:38:12] Checking for apptainer binary...
[2025-07-26 05:38:12] which: no apptainer in ((null))
[2025-07-26 05:38:12] apptainer is not installed, using version from CVMFS
[2025-07-26 05:38:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 05:38:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-26 05:38:13] apptainer works
[2025-07-26 05:38:13] Set ATHENA_PROC_NUMBER=4
[2025-07-26 05:38:13] Set ATHENA_CORE_NUMBER=4
[2025-07-26 05:38:13] Starting ATLAS job with PandaID=6741708959
[2025-07-26 05:38:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:17:10 (3011194): wrapper (7.7.26015): starting
07:17:10 (3011194): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 07:17:10] Arguments: --nthreads 4
[2025-07-26 07:17:10] Threads: 4
[2025-07-26 07:17:10] This job has been restarted, cleaning up previous attempt
[2025-07-26 07:17:10] Checking for CVMFS
[2025-07-26 07:17:10] No cvmfs_config command found, will try listing directly
[2025-07-26 07:17:10] CVMFS is ok
[2025-07-26 07:17:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 07:17:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 07:17:10] Further information can be found at the LHC@home message board.
[2025-07-26 07:17:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 07:17:10] Checking for apptainer binary...
[2025-07-26 07:17:10] which: no apptainer in ((null))
[2025-07-26 07:17:10] apptainer is not installed, using version from CVMFS
[2025-07-26 07:17:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 07:17:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-26 07:17:10] apptainer works
[2025-07-26 07:17:10] Set ATHENA_PROC_NUMBER=4
[2025-07-26 07:17:10] Set ATHENA_CORE_NUMBER=4
[2025-07-26 07:17:10] Starting ATLAS job with PandaID=6741708959
[2025-07-26 07:17:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:55:48 (3196042): wrapper (7.7.26015): starting
07:55:48 (3196042): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 07:55:48] Arguments: --nthreads 4
[2025-07-26 07:55:48] Threads: 4
[2025-07-26 07:55:48] This job has been restarted, cleaning up previous attempt
[2025-07-26 07:55:48] Checking for CVMFS
[2025-07-26 07:55:48] No cvmfs_config command found, will try listing directly
[2025-07-26 07:55:48] CVMFS is ok
[2025-07-26 07:55:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 07:55:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 07:55:48] Further information can be found at the LHC@home message board.
[2025-07-26 07:55:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 07:55:48] Checking for apptainer binary...
[2025-07-26 07:55:48] which: no apptainer in ((null))
[2025-07-26 07:55:48] apptainer is not installed, using version from CVMFS
[2025-07-26 07:55:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 07:55:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-26 07:55:48] apptainer works
[2025-07-26 07:55:48] Set ATHENA_PROC_NUMBER=4
[2025-07-26 07:55:48] Set ATHENA_CORE_NUMBER=4
[2025-07-26 07:55:48] Starting ATLAS job with PandaID=6741708959
[2025-07-26 07:55:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 11:47:47]  *** The last 200 lines of the pilot log: ***
[2025-07-26 11:47:47] 2025-07-26 09:47:13,901 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 11:47:47] 2025-07-26 09:47:13,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 11:47:47] 2025-07-26 09:47:13,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 11:47:47] 2025-07-26 09:47:13,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 11:47:47] 2025-07-26 09:47:13,905 | INFO     | fitting pss+swap vs Time
[2025-07-26 11:47:47] 2025-07-26 09:47:13,906 | INFO     | sum of square deviations: 3627000098.0
[2025-07-26 11:47:47] 2025-07-26 09:47:13,907 | INFO     | sum of deviations: 25121449928.000004
[2025-07-26 11:47:47] 2025-07-26 09:47:13,907 | INFO     | mean x: 1753516289.0
[2025-07-26 11:47:47] 2025-07-26 09:47:13,908 | INFO     | mean y: 2324320.176211454
[2025-07-26 11:47:47] 2025-07-26 09:47:13,908 | INFO     | -- intersect: -12142939110.15466
[2025-07-26 11:47:47] 2025-07-26 09:47:13,908 | INFO     | intersect: -12142939110.15466
[2025-07-26 11:47:47] 2025-07-26 09:47:13,908 | INFO     | chi2: 2.2191229422366403
[2025-07-26 11:47:47] 2025-07-26 09:47:13,908 | INFO     | sum of square deviations: 3392567795.5
[2025-07-26 11:47:47] 2025-07-26 09:47:13,910 | INFO     | sum of deviations: 38987911307.000015
[2025-07-26 11:47:47] 2025-07-26 09:47:13,910 | INFO     | mean x: 1753516136.5
[2025-07-26 11:47:47] 2025-07-26 09:47:13,910 | INFO     | mean y: 2333169.6306306305
[2025-07-26 11:47:47] 2025-07-26 09:47:13,910 | INFO     | -- intersect: -20149344181.058685
[2025-07-26 11:47:47] 2025-07-26 09:47:13,910 | INFO     | intersect: -20149344181.058685
[2025-07-26 11:47:47] 2025-07-26 09:47:13,911 | INFO     | chi2: 1.382985235036131
[2025-07-26 11:47:47] 2025-07-26 09:47:13,911 | INFO     | current chi2=1.382985235036131 (change=37.67874646718632 %)
[2025-07-26 11:47:47] 2025-07-26 09:47:13,911 | INFO     | sum of square deviations: 3168461268.0
[2025-07-26 11:47:47] 2025-07-26 09:47:13,913 | INFO     | sum of deviations: 37960741884.00001
[2025-07-26 11:47:47] 2025-07-26 09:47:13,913 | INFO     | mean x: 1753515984.0
[2025-07-26 11:47:47] 2025-07-26 09:47:13,913 | INFO     | mean y: 2332470.723502304
[2025-07-26 11:47:47] 2025-07-26 09:47:13,913 | INFO     | -- intersect: -21006214589.75844
[2025-07-26 11:47:47] 2025-07-26 09:47:13,913 | INFO     | intersect: -21006214589.75844
[2025-07-26 11:47:47] 2025-07-26 09:47:13,913 | INFO     | chi2: 1.3832764840046496
[2025-07-26 11:47:47] 2025-07-26 09:47:13,913 | INFO     | current chi2=1.3832764840046496 (change=-0.02105944164408396 %)
[2025-07-26 11:47:47] 2025-07-26 09:47:13,913 | INFO     | right removable region: 216
[2025-07-26 11:47:47] 2025-07-26 09:47:13,914 | INFO     | sum of square deviations: 3392567795.5
[2025-07-26 11:47:47] 2025-07-26 09:47:13,915 | INFO     | sum of deviations: -6016525251.499999
[2025-07-26 11:47:47] 2025-07-26 09:47:13,915 | INFO     | mean x: 1753516441.5
[2025-07-26 11:47:47] 2025-07-26 09:47:13,916 | INFO     | mean y: 2344364.8873873875
[2025-07-26 11:47:47] 2025-07-26 09:47:13,916 | INFO     | -- intersect: 3112105638.6927614
[2025-07-26 11:47:47] 2025-07-26 09:47:13,916 | INFO     | intersect: 3112105638.6927614
[2025-07-26 11:47:47] 2025-07-26 09:47:13,916 | INFO     | chi2: 0.8572405579945375
[2025-07-26 11:47:47] 2025-07-26 09:47:13,916 | INFO     | current chi2=0.8572405579945375 (change=61.37029897358774 %)
[2025-07-26 11:47:47] 2025-07-26 09:47:13,917 | INFO     | sum of square deviations: 3168461268.0
[2025-07-26 11:47:47] 2025-07-26 09:47:13,918 | INFO     | sum of deviations: -7488130395.999999
[2025-07-26 11:47:47] 2025-07-26 09:47:13,918 | INFO     | mean x: 1753516594.0
[2025-07-26 11:47:47] 2025-07-26 09:47:13,918 | INFO     | mean y: 2345365.8571428573
[2025-07-26 11:47:47] 2025-07-26 09:47:13,918 | INFO     | -- intersect: 4146489730.2003055
[2025-07-26 11:47:47] 2025-07-26 09:47:13,918 | INFO     | intersect: 4146489730.2003055
[2025-07-26 11:47:47] 2025-07-26 09:47:13,919 | INFO     | chi2: 0.855901126745828
[2025-07-26 11:47:47] 2025-07-26 09:47:13,919 | INFO     | current chi2=0.855901126745828 (change=0.15624916905973488 %)
[2025-07-26 11:47:47] 2025-07-26 09:47:13,919 | INFO     | left removable region: 20
[2025-07-26 11:47:47] 2025-07-26 09:47:13,919 | INFO     | sum of square deviations: 2334722845.0
[2025-07-26 11:47:47] 2025-07-26 09:47:13,920 | INFO     | sum of deviations: 4051563880.0
[2025-07-26 11:47:47] 2025-07-26 09:47:13,921 | INFO     | mean x: 1753516563.5
[2025-07-26 11:47:47] 2025-07-26 09:47:13,921 | INFO     | mean y: 2356586.826530612
[2025-07-26 11:47:47] 2025-07-26 09:47:13,921 | INFO     | -- intersect: -3040610327.5860996
[2025-07-26 11:47:47] 2025-07-26 09:47:13,921 | INFO     | intersect: -3040610327.5860996
[2025-07-26 11:47:47] 2025-07-26 09:47:13,921 | INFO     | chi2: 0.0003569847508540874
[2025-07-26 11:47:47] 2025-07-26 09:47:13,921 | INFO     | -- intersect: -3040610327.5860996
[2025-07-26 11:47:47] 2025-07-26 09:47:13,921 | INFO     | current memory leak: 1.74 B/s (using 196 data points, chi2=0.00)
[2025-07-26 11:47:47] 2025-07-26 09:47:13,922 | INFO     | could have reported an average CPU frequency of 2718 MHz (11 samples)
[2025-07-26 11:47:47] 2025-07-26 09:47:13,922 | INFO     | ..............................
[2025-07-26 11:47:47] 2025-07-26 09:47:13,922 | INFO     | . Timing measurements:
[2025-07-26 11:47:47] 2025-07-26 09:47:13,922 | INFO     | . get job = 0 s
[2025-07-26 11:47:47] 2025-07-26 09:47:13,922 | INFO     | . initial setup = 1 s
[2025-07-26 11:47:47] 2025-07-26 09:47:13,922 | INFO     | . payload setup = 9 s
[2025-07-26 11:47:47] 2025-07-26 09:47:13,923 | INFO     | . stage-in = 0 s
[2025-07-26 11:47:47] 2025-07-26 09:47:13,923 | INFO     | . payload execution = 13825 s
[2025-07-26 11:47:47] 2025-07-26 09:47:13,923 | INFO     | . stage-out = 1 s
[2025-07-26 11:47:47] 2025-07-26 09:47:13,923 | INFO     | . log creation = 0 s
[2025-07-26 11:47:47] 2025-07-26 09:47:13,923 | INFO     | ..............................
[2025-07-26 11:47:47] 2025-07-26 09:47:14,027 | INFO     | 
[2025-07-26 11:47:47] 2025-07-26 09:47:14,027 | INFO     | job summary report
[2025-07-26 11:47:47] 2025-07-26 09:47:14,027 | INFO     | --------------------------------------------------
[2025-07-26 11:47:47] 2025-07-26 09:47:14,027 | INFO     | PanDA job id: 6741708959
[2025-07-26 11:47:47] 2025-07-26 09:47:14,027 | INFO     | task id: 45697453
[2025-07-26 11:47:47] 2025-07-26 09:47:14,027 | INFO     | errors: (none)
[2025-07-26 11:47:47] 2025-07-26 09:47:14,027 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | pilot state: finished 
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | transexitcode: 0
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | exeerrorcode: 0
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | exeerrordiag: 
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | exitcode: 0
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | exitmsg: OK
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | cpuconsumptiontime: 54048 s
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | nevents: 400
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | neventsw: 0
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | pid: 3224283
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | pgrp: 3224283
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | corecount: 4
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | event service: False
[2025-07-26 11:47:47] 2025-07-26 09:47:14,028 | INFO     | sizes: {0: 2397397, 1: 2397596, 7: 2397858, 12: 2397886, 13839: 2428983, 13840: 2428982, 13842: 2438186, 13846: 2438242, 13855: 2438436}
[2025-07-26 11:47:47] 2025-07-26 09:47:14,029 | INFO     | --------------------------------------------------
[2025-07-26 11:47:47] 2025-07-26 09:47:14,029 | INFO     | 
[2025-07-26 11:47:47] 2025-07-26 09:47:14,029 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-07-26 11:47:47] 2025-07-26 09:47:14,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | job 6741708959 has completed (purged errors)
[2025-07-26 11:47:47] 2025-07-26 09:47:14,070 | INFO     | overall cleanup function is called
[2025-07-26 11:47:47] 2025-07-26 09:47:15,080 | INFO     | --- collectZombieJob: --- 10, [3224283]
[2025-07-26 11:47:47] 2025-07-26 09:47:15,080 | INFO     | zombie collector waiting for pid 3224283
[2025-07-26 11:47:47] 2025-07-26 09:47:15,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 11:47:47] 2025-07-26 09:47:15,081 | INFO     | collected zombie processes
[2025-07-26 11:47:47] 2025-07-26 09:47:15,081 | INFO     | will attempt to kill all subprocesses of pid=3224283
[2025-07-26 11:47:47] 2025-07-26 09:47:15,747 | INFO     | process IDs to be killed: [3224283] (in reverse order)
[2025-07-26 11:47:47] 2025-07-26 09:47:16,010 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 11:47:47] 2025-07-26 09:47:16,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 11:47:47] 2025-07-26 09:47:16,036 | INFO     | did not find any defunct processes belonging to 3224283
[2025-07-26 11:47:47] 2025-07-26 09:47:16,061 | INFO     | did not find any defunct processes belonging to 3224283
[2025-07-26 11:47:47] 2025-07-26 09:47:16,061 | INFO     | ready for new job
[2025-07-26 11:47:47] 2025-07-26 09:47:16,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 11:47:47] 2025-07-26 09:47:16,064 | INFO     | ***************************************
[2025-07-26 11:47:47] 2025-07-26 09:47:16,064 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 11:47:47] 2025-07-26 09:47:16,064 | INFO     | ***************************************
[2025-07-26 11:47:47] 2025-07-26 09:47:16,064 | INFO     | 
[2025-07-26 11:47:47] 2025-07-26 09:47:16,072 | INFO     | architecture information:
[2025-07-26 11:47:47] 2025-07-26 09:47:16,072 | INFO     | executing command: cat /etc/os-release
[2025-07-26 11:47:47] 2025-07-26 09:47:16,097 | INFO     | cat /etc/os-release:
[2025-07-26 11:47:47] NAME="CentOS Linux"
[2025-07-26 11:47:47] VERSION="7 (Core)"
[2025-07-26 11:47:47] ID="centos"
[2025-07-26 11:47:47] ID_LIKE="rhel fedora"
[2025-07-26 11:47:47] VERSION_ID="7"
[2025-07-26 11:47:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 11:47:47] ANSI_COLOR="0;31"
[2025-07-26 11:47:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 11:47:47] HOME_URL="https://www.centos.org/"
[2025-07-26 11:47:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 11:47:47] 
[2025-07-26 11:47:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 11:47:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 11:47:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 11:47:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 11:47:47] 
[2025-07-26 11:47:47] 2025-07-26 09:47:16,098 | INFO     | ***************************************
[2025-07-26 11:47:47] 2025-07-26 09:47:16,600 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-07-26 11:47:47] 2025-07-26 09:47:16,625 | INFO     | sufficient remaining disk space (3274201628672 B)
[2025-07-26 11:47:47] 2025-07-26 09:47:16,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 11:47:47] 2025-07-26 09:47:16,625 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 11:47:47] 2025-07-26 09:47:16,625 | INFO     | update_server=False
[2025-07-26 11:47:47] 2025-07-26 09:47:16,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 11:47:47] 2025-07-26 09:47:16,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:47:47] 2025-07-26 09:47:16,626 | INFO     | aborting loop
[2025-07-26 11:47:47] 2025-07-26 09:47:16,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 11:47:47] 2025-07-26 09:47:16,682 | INFO     | all job control threads have been joined
[2025-07-26 11:47:47] 2025-07-26 09:47:17,625 | INFO     | all data control threads have been joined
[2025-07-26 11:47:47] 2025-07-26 09:47:17,630 | INFO     | [job] retrieve thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:17,631 | INFO     | [job] job monitor thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:17,687 | INFO     | [job] control thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:17,833 | INFO     | [payload] failed_post thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,050 | INFO     | [job] validate thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,080 | INFO     | all payload control threads have been joined
[2025-07-26 11:47:47] 2025-07-26 09:47:18,198 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,318 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,318 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,632 | INFO     | [data] copytool_out thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,637 | INFO     | [data] control thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,653 | INFO     | [payload] validate_post thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,831 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:18,926 | INFO     | [data] copytool_in thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:19,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:47:47] 2025-07-26 09:47:19,085 | INFO     | [payload] control thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:19,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 11:47:47] 2025-07-26 09:47:20,021 | INFO     | [job] queue monitor thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:23,459 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 11:47:47] 2025-07-26 09:47:25,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22785079965504)>', '<ExcThread(monitor, started 22784828700416)>']
[2025-07-26 11:47:47] 2025-07-26 09:47:30,136 | INFO     | all workflow threads have been joined
[2025-07-26 11:47:47] 2025-07-26 09:47:30,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 11:47:47] 2025-07-26 09:47:30,137 | INFO     | traces error code: 0
[2025-07-26 11:47:47] 2025-07-26 09:47:30,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 11:47:47] 2025-07-26 09:47:47,078 | INFO     | PID=3202285 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 11:47:47] 2025-07-26 09:47:47,079 | INFO     | .. there are 24 such processes running
[2025-07-26 11:47:47] 2025-07-26 09:47:47,080 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 11:47:47] 2025-07-26 09:47:47,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 11:47:47] 2025-07-26 09:47:47,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 11:47:47] 2025-07-26 09:47:47,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 11:47:47] 2025-07-26 09:47:47,080 | INFO     | [monitor] control thread has ended
[2025-07-26 11:47:47] 2025-07-26 09:47:47,245 [wrapper] ==== pilot stdout END ====
[2025-07-26 11:47:47] 2025-07-26 09:47:47,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 11:47:47] 2025-07-26 09:47:47,251 [wrapper] pilotpid: 3202285
[2025-07-26 11:47:47] 2025-07-26 09:47:47,255 [wrapper] Pilot exit status: 0
[2025-07-26 11:47:47] 2025-07-26 09:47:47,269 [wrapper] pandaids: 6741708959 6741708959 6741708959
[2025-07-26 11:47:47] 2025-07-26 09:47:47,407 [wrapper] cleanup supervisor_pilot   96331 3202287
[2025-07-26 11:47:47] 2025-07-26 09:47:47,412 [wrapper] Test setup, not cleaning
[2025-07-26 11:47:47] 2025-07-26 09:47:47,417 [wrapper] apfmon messages muted
[2025-07-26 11:47:47] 2025-07-26 09:47:47,421 [wrapper] ==== wrapper stdout END ====
[2025-07-26 11:47:47] 2025-07-26 09:47:47,424 [wrapper] ==== wrapper stderr END ====
[2025-07-26 11:47:47]  *** Error codes and diagnostics ***
[2025-07-26 11:47:47]     "exeErrorCode": 0,
[2025-07-26 11:47:47]     "exeErrorDiag": "",
[2025-07-26 11:47:47]     "pilotErrorCode": 0,
[2025-07-26 11:47:47]     "pilotErrorDiag": "",
[2025-07-26 11:47:47]  *** Listing of results directory ***
[2025-07-26 11:47:47] total 881864
[2025-07-26 11:47:47] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc    530466 Jul 22 00:22 pilot3.tar.gz
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc      5112 Jul 22 00:36 queuedata.json
[2025-07-26 11:47:47] -rwx------ 1 boinc boinc     36292 Jul 22 00:36 runpilot2-wrapper.sh
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc       100 Jul 26 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 11:47:47] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 05:38 run_atlas
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc       105 Jul 26 05:38 job.xml
[2025-07-26 11:47:47] -rw-r--r-- 3 boinc boinc 319981188 Jul 26 05:38 EVNT.45697451._000040.pool.root.1
[2025-07-26 11:47:47] -rw-r--r-- 3 boinc boinc 319981188 Jul 26 05:38 ATLAS.root_0
[2025-07-26 11:47:47] -rw-r--r-- 2 boinc boinc     15095 Jul 26 05:38 start_atlas.sh
[2025-07-26 11:47:47] drwxrwx--x 2 boinc boinc      4096 Jul 26 05:38 shared
[2025-07-26 11:47:47] -rw-r--r-- 2 boinc boinc    542903 Jul 26 05:38 input.tar.gz
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc         0 Jul 26 05:38 boinc_lockfile
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc      6691 Jul 26 07:55 init_data.xml
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc      2631 Jul 26 07:55 pandaJob.out
[2025-07-26 11:47:47] -rw------- 1 boinc boinc    980001 Jul 26 07:55 agis_schedconf.cvmfs.json
[2025-07-26 11:47:47] -rw------- 1 boinc boinc 255947437 Jul 26 11:46 HITS.45697453._000979.pool.root.1
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc       531 Jul 26 11:46 boinc_task_state.xml
[2025-07-26 11:47:47] -rw------- 1 boinc boinc      1029 Jul 26 11:46 memory_monitor_summary.json
[2025-07-26 11:47:47] -rw------- 1 boinc boinc   1593052 Jul 26 11:47 agis_ddmendpoints.agis.ALL.json
[2025-07-26 11:47:47] -rw------- 1 boinc boinc    325170 Jul 26 11:47 log.45697453._000979.job.log.tgz.1
[2025-07-26 11:47:47] -rw------- 1 boinc boinc      7772 Jul 26 11:47 heartbeat.json
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc      8192 Jul 26 11:47 boinc_mmap_file
[2025-07-26 11:47:47] -rw------- 1 boinc boinc        97 Jul 26 11:47 pilot_heartbeat.json
[2025-07-26 11:47:47] -rw------- 1 boinc boinc       823 Jul 26 11:47 pilotlog.txt
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc        28 Jul 26 11:47 wrapper_checkpoint.txt
[2025-07-26 11:47:47] -rw------- 1 boinc boinc   1289837 Jul 26 11:47 log.45697453._000979.job.log.1
[2025-07-26 11:47:47] -rw------- 1 boinc boinc       357 Jul 26 11:47 output.list
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc       620 Jul 26 11:47 runtime_log
[2025-07-26 11:47:47] -rw------- 1 boinc boinc   1638400 Jul 26 11:47 result.tar.gz
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc      9104 Jul 26 11:47 runtime_log.err
[2025-07-26 11:47:47] -rw------- 1 boinc boinc       916 Jul 26 11:47 3L8NDmiIEy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLgtKDmz4fTtn.diag
[2025-07-26 11:47:47] -rw-r--r-- 1 boinc boinc     24554 Jul 26 11:47 stderr.txt
[2025-07-26 11:47:47] HITS file was successfully produced:
[2025-07-26 11:47:47] -rw------- 1 boinc boinc 255947437 Jul 26 11:46 shared/HITS.pool.root.1
[2025-07-26 11:47:47]  *** Contents of shared directory: ***
[2025-07-26 11:47:47] total 564592
[2025-07-26 11:47:47] -rw-r--r-- 3 boinc boinc 319981188 Jul 26 05:38 ATLAS.root_0
[2025-07-26 11:47:47] -rw-r--r-- 2 boinc boinc     15095 Jul 26 05:38 start_atlas.sh
[2025-07-26 11:47:47] -rw-r--r-- 2 boinc boinc    542903 Jul 26 05:38 input.tar.gz
[2025-07-26 11:47:47] -rw------- 1 boinc boinc 255947437 Jul 26 11:46 HITS.pool.root.1
[2025-07-26 11:47:47] -rw------- 1 boinc boinc   1638400 Jul 26 11:47 result.tar.gz
11:47:49 (3196042): run_atlas exited; CPU time 54828.924300
11:47:49 (3196042): called boinc_finish(0)

</stderr_txt>
]]>

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