Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:28:44 (3260834): wrapper (7.7.26015): starting
16:28:44 (3260834): wrapper: running run_atlas (--nthreads 12)
[2025-07-21 16:28:44] Arguments: --nthreads 12
[2025-07-21 16:28:44] Threads: 12
[2025-07-21 16:28:44] Checking for CVMFS
[2025-07-21 16:28:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 16:28:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 16:28:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 16:28:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 16:28:46] 2.11.5.0 7110 29165 325532 148601 3 237 45189623 45568000 19936 130560 0 209516288 99.733 168964326 23718 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-21 16:28:46] CVMFS is ok
[2025-07-21 16:28:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 16:28:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 16:28:46] Further information can be found at the LHC@home message board.
[2025-07-21 16:28:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 16:28:46] Checking for apptainer binary...
[2025-07-21 16:28:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 16:28:46] Running /usr/bin/apptainer --version
[2025-07-21 16:28:46] apptainer version 1.4.1-1.el9
[2025-07-21 16:28:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 16:28:46] wns0048.triumf.lcg
[2025-07-21 16:28:46] apptainer works
[2025-07-21 16:28:46] Set ATHENA_PROC_NUMBER=12
[2025-07-21 16:28:46] Set ATHENA_CORE_NUMBER=12
[2025-07-21 16:28:46] Starting ATLAS job with PandaID=6741693322
[2025-07-21 16:28:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-21 16:33:19]  *** The last 200 lines of the pilot log: ***
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | WARNING  | wrong length of table data, x=[1753140606.0], y=[2188.0] (must be same and length>=4)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | could have reported an average CPU frequency of 2660 MHz (4 samples)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | ..............................
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . Timing measurements:
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . get job = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . initial setup = 8 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . payload setup = 17 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . stage-in = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . payload execution = 41 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | . stage-out = 1 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | . log creation = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | ..............................
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741693322/pilotlog.txt
[2025-07-21 16:33:19] 2025-07-21 23:32:45,342 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-21 16:33:19] - Log from pilotlog.txt -
[2025-07-21 16:33:19] 2025-07-21 23:32:45,266 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741693322/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | INFO     | extracted standard info from prmon json
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | WARNING  | wrong length of table data, x=[1753140606.0], y=[2188.0] (must be same and length>=4)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | could have reported an average CPU frequency of 2660 MHz (4 samples)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | ..............................
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . Timing measurements:
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . get job = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . initial setup = 8 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . payload setup = 17 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . stage-in = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . payload execution = 41 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | . stage-out = 1 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | . log creation = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | ..............................
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741693322/pilotlog.txt
[2025-07-21 16:33:19] 2025-07-21 23:32:45,342 | WARNING  | 
[2025-07-21 16:33:19] [begin log extracts]
[2025-07-21 16:33:19] - Log from pilotlog.txt -
[2025-07-21 16:33:19] 2025-07-21 23:32:45,266 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741693322/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | INFO     | extracted standard info from prmon json
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 16:33:19] 2025-07-21 23:32:45,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | WARNING  | wrong length of table data, x=[1753140606.0], y=[2188.0] (must be same and length>=4)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | could have reported an average CPU frequency of 2660 MHz (4 samples)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | ..............................
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . Timing measurements:
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . get job = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . initial setup = 8 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . payload setup = 17 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . stage-in = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,282 | INFO     | . payload execution = 41 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | . stage-out = 1 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | . log creation = 0 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | ..............................
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-21 16:33:19] 2025-07-21 23:32:45,283 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741693322/pilotlog.txt
[2025-07-21 16:33:19] [end log extracts]
[2025-07-21 16:33:19] 2025-07-21 23:32:45,343 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,364 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-21 16:33:19] 2025-07-21 23:32:45,934 | INFO     | 
[2025-07-21 16:33:19] 2025-07-21 23:32:45,934 | INFO     | job summary report
[2025-07-21 16:33:19] 2025-07-21 23:32:45,934 | INFO     | --------------------------------------------------
[2025-07-21 16:33:19] 2025-07-21 23:32:45,934 | INFO     | PanDA job id: 6741693322
[2025-07-21 16:33:19] 2025-07-21 23:32:45,934 | INFO     | task id: 45697541
[2025-07-21 16:33:19] 2025-07-21 23:32:45,934 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-21 16:30:25,437 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | pilot state: failed 
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | transexitcode: 65
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | exeerrorcode: 65
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | exitcode: 65
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | cpuconsumptiontime: 16 s
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | nevents: 0
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | neventsw: 0
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | pid: 3270765
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | pgrp: 3270765
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | corecount: 12
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | event service: False
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | sizes: {0: 2397509, 8: 2397771, 11: 2397799, 62: 2421036, 64: 2425328, 65: 2425384, 193: 2425678}
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | --------------------------------------------------
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | 
[2025-07-21 16:33:19] 2025-07-21 23:32:45,935 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-21 16:33:19] 2025-07-21 23:32:46,058 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-21 16:33:19] 2025-07-21 23:32:46,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-21 16:33:19] 2025-07-21 23:32:46,060 | INFO     | job 6741693322 has completed (purged errors)
[2025-07-21 16:33:19] 2025-07-21 23:32:46,061 | INFO     | overall cleanup function is called
[2025-07-21 16:33:19] 2025-07-21 23:32:47,068 | INFO     | --- collectZombieJob: --- 10, [3270765]
[2025-07-21 16:33:19] 2025-07-21 23:32:47,068 | INFO     | zombie collector waiting for pid 3270765
[2025-07-21 16:33:19] 2025-07-21 23:32:47,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-21 16:33:19] 2025-07-21 23:32:47,068 | INFO     | collected zombie processes
[2025-07-21 16:33:19] 2025-07-21 23:32:47,068 | INFO     | will attempt to kill all subprocesses of pid=3270765
[2025-07-21 16:33:19] 2025-07-21 23:32:47,809 | INFO     | process IDs to be killed: [3270765] (in reverse order)
[2025-07-21 16:33:19] 2025-07-21 23:32:47,909 | WARNING  | found no corresponding commands to process id(s)
[2025-07-21 16:33:19] 2025-07-21 23:32:47,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-21 16:33:19] 2025-07-21 23:32:47,962 | INFO     | did not find any defunct processes belonging to 3270765
[2025-07-21 16:33:19] 2025-07-21 23:32:48,020 | INFO     | did not find any defunct processes belonging to 3270765
[2025-07-21 16:33:19] 2025-07-21 23:32:48,020 | INFO     | ready for new job
[2025-07-21 16:33:19] 2025-07-21 23:32:48,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-21 16:33:19] 2025-07-21 23:32:48,022 | INFO     | ***************************************
[2025-07-21 16:33:19] 2025-07-21 23:32:48,022 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-21 16:33:19] 2025-07-21 23:32:48,022 | INFO     | ***************************************
[2025-07-21 16:33:19] 2025-07-21 23:32:48,022 | INFO     | 
[2025-07-21 16:33:19] 2025-07-21 23:32:48,042 | INFO     | architecture information:
[2025-07-21 16:33:19] 2025-07-21 23:32:48,054 | INFO     | executing command: cat /etc/os-release
[2025-07-21 16:33:19] 2025-07-21 23:32:48,070 | INFO     | cat /etc/os-release:
[2025-07-21 16:33:19] NAME="CentOS Linux"
[2025-07-21 16:33:19] VERSION="7 (Core)"
[2025-07-21 16:33:19] ID="centos"
[2025-07-21 16:33:19] ID_LIKE="rhel fedora"
[2025-07-21 16:33:19] VERSION_ID="7"
[2025-07-21 16:33:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-21 16:33:19] ANSI_COLOR="0;31"
[2025-07-21 16:33:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-21 16:33:19] HOME_URL="https://www.centos.org/"
[2025-07-21 16:33:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-21 16:33:19] 
[2025-07-21 16:33:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-21 16:33:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-21 16:33:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-21 16:33:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-21 16:33:19] 
[2025-07-21 16:33:19] 2025-07-21 23:32:48,070 | INFO     | ***************************************
[2025-07-21 16:33:19] 2025-07-21 23:32:48,574 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-21 16:33:19] 2025-07-21 23:32:48,624 | INFO     | sufficient remaining disk space (1876186628096 B)
[2025-07-21 16:33:19] 2025-07-21 23:32:48,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-21 16:33:19] 2025-07-21 23:32:48,625 | INFO     | current server update state: UPDATING_FINAL
[2025-07-21 16:33:19] 2025-07-21 23:32:48,625 | INFO     | update_server=False
[2025-07-21 16:33:19] 2025-07-21 23:32:48,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-21 16:33:19] 2025-07-21 23:32:48,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-21 16:33:19] 2025-07-21 23:32:49,095 | INFO     | all data control threads have been joined
[2025-07-21 16:33:19] 2025-07-21 23:32:49,259 | INFO     | all payload control threads have been joined
[2025-07-21 16:33:19] 2025-07-21 23:32:49,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-21 16:33:19] 2025-07-21 23:32:49,419 | INFO     | aborting loop
[2025-07-21 16:33:19] 2025-07-21 23:32:49,646 | INFO     | [job] retrieve thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:49,692 | INFO     | [job] validate thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:49,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:49,794 | INFO     | [payload] failed_post thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:49,838 | INFO     | [payload] validate_pre thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:50,068 | INFO     | [payload] execute_payloads thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:50,101 | INFO     | [data] control thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:50,265 | INFO     | [payload] control thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:50,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-21 16:33:19] 2025-07-21 23:32:50,357 | INFO     | all job control threads have been joined
[2025-07-21 16:33:19] 2025-07-21 23:32:50,425 | INFO     | [job] job monitor thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:50,477 | INFO     | [payload] validate_post thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:50,634 | INFO     | [data] copytool_out thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:50,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-21 16:33:19] 2025-07-21 23:32:51,002 | INFO     | [data] copytool_in thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:51,080 | INFO     | [job] create_data_payload thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:51,363 | INFO     | [job] control thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:51,948 | INFO     | [job] queue monitor thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:54,318 | INFO     | [data] queue_monitor thread has finished
[2025-07-21 16:33:19] 2025-07-21 23:32:55,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569854797632)>', '<ExcThread(monitor, started 140569019926272)>']
[2025-07-21 16:33:19] 2025-07-21 23:33:00,493 | INFO     | all workflow threads have been joined
[2025-07-21 16:33:19] 2025-07-21 23:33:00,493 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-21 16:33:19] 2025-07-21 23:33:00,493 | INFO     | traces error code: 0
[2025-07-21 16:33:19] 2025-07-21 23:33:00,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-21 16:33:19] 2025-07-21 23:33:18,708 | INFO     | PID=3264413 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-21 16:33:19] 2025-07-21 23:33:18,709 | INFO     | .. there are 42 such processes running
[2025-07-21 16:33:19] 2025-07-21 23:33:18,709 | INFO     | found 0 job(s) in 20 queues
[2025-07-21 16:33:19] 2025-07-21 23:33:18,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-21 16:33:19] 2025-07-21 23:33:18,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-21 16:33:19] 2025-07-21 23:33:18,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-21 16:33:19] 2025-07-21 23:33:18,709 | INFO     | [monitor] control thread has ended
[2025-07-21 16:33:19] 2025-07-21 23:33:18,979 [wrapper] ==== pilot stdout END ====
[2025-07-21 16:33:19] 2025-07-21 23:33:18,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-21 16:33:19] 2025-07-21 23:33:19,037 [wrapper] pilotpid: 3264413
[2025-07-21 16:33:19] 2025-07-21 23:33:19,046 [wrapper] Pilot exit status: 0
[2025-07-21 16:33:19] 2025-07-21 23:33:19,116 [wrapper] pandaids: 6741693322
[2025-07-21 16:33:19] 2025-07-21 23:33:19,189 [wrapper] cleanup supervisor_pilot 3264419 3264414
[2025-07-21 16:33:19] 2025-07-21 23:33:19,192 [wrapper] Test setup, not cleaning
[2025-07-21 16:33:19] 2025-07-21 23:33:19,194 [wrapper] apfmon messages muted
[2025-07-21 16:33:19] 2025-07-21 23:33:19,196 [wrapper] ==== wrapper stdout END ====
[2025-07-21 16:33:19] 2025-07-21 23:33:19,197 [wrapper] ==== wrapper stderr END ====
[2025-07-21 16:33:19]  *** Error codes and diagnostics ***
[2025-07-21 16:33:19]     "exeErrorCode": 65,
[2025-07-21 16:33:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 16:33:19]     "pilotErrorCode": 1305,
[2025-07-21 16:33:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-21 16:33:19]  *** Listing of results directory ***
[2025-07-21 16:33:19] total 338392
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc    530466 Jul 21 14:26 pilot3.tar.gz
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc      5112 Jul 21 14:50 queuedata.json
[2025-07-21 16:33:19] -rwx------. 1 boinc boinc     36292 Jul 21 14:51 runpilot2-wrapper.sh
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc       100 Jul 21 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-21 16:33:19] -rwxr-xr-x. 1 boinc boinc      7986 Jul 21 16:28 run_atlas
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc       105 Jul 21 16:28 job.xml
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc      6597 Jul 21 16:28 init_data.xml
[2025-07-21 16:33:19] -rw-r--r--. 2 boinc boinc 342456453 Jul 21 16:28 EVNT.45697539._000029.pool.root.1
[2025-07-21 16:33:19] -rw-r--r--. 2 boinc boinc     15095 Jul 21 16:28 start_atlas.sh
[2025-07-21 16:33:19] drwxrwx--x. 2 boinc boinc      4096 Jul 21 16:28 shared
[2025-07-21 16:33:19] -rw-r--r--. 2 boinc boinc    542903 Jul 21 16:28 input.tar.gz
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc         0 Jul 21 16:28 boinc_lockfile
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc      2589 Jul 21 16:28 pandaJob.out
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc    977326 Jul 21 16:29 agis_schedconf.cvmfs.json
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc   1593055 Jul 21 16:29 agis_ddmendpoints.agis.ALL.json
[2025-07-21 16:33:19] drwx------. 4 boinc boinc      4096 Jul 21 16:29 pilot3
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc       524 Jul 21 16:30 boinc_task_state.xml
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc       962 Jul 21 16:30 memory_monitor_summary.json
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc     21126 Jul 21 16:30 log.45697541._000714.job.log.tgz.1
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc      8378 Jul 21 16:32 heartbeat.json
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc      8192 Jul 21 16:33 boinc_mmap_file
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc        22 Jul 21 16:33 wrapper_checkpoint.txt
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc       823 Jul 21 16:33 pilotlog.txt
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc        95 Jul 21 16:33 pilot_heartbeat.json
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc     78470 Jul 21 16:33 log.45697541._000714.job.log.1
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc       188 Jul 21 16:33 output.list
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc       620 Jul 21 16:33 runtime_log
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc    122880 Jul 21 16:33 result.tar.gz
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc      8485 Jul 21 16:33 runtime_log.err
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc       643 Jul 21 16:33 mkhLDmeaDy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUXtKDm53lwSn.diag
[2025-07-21 16:33:19] -rw-r--r--. 1 boinc boinc      2140 Jul 21 16:33 stderr.txt
[2025-07-21 16:33:19] No HITS result produced
[2025-07-21 16:33:19]  *** Contents of shared directory: ***
[2025-07-21 16:33:19] total 335104
[2025-07-21 16:33:19] -rw-r--r--. 2 boinc boinc 342456453 Jul 21 16:28 ATLAS.root_0
[2025-07-21 16:33:19] -rw-r--r--. 2 boinc boinc     15095 Jul 21 16:28 start_atlas.sh
[2025-07-21 16:33:19] -rw-r--r--. 2 boinc boinc    542903 Jul 21 16:28 input.tar.gz
[2025-07-21 16:33:19] -rw-------. 1 boinc boinc    122880 Jul 21 16:33 result.tar.gz
16:33:20 (3260834): run_atlas exited; CPU time 24.809892
16:33:20 (3260834): called boinc_finish(0)

</stderr_txt>
]]>

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