Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:14:27 (21610): wrapper (7.7.26015): starting
05:14:27 (21610): wrapper: running run_atlas (--nthreads 8)
[2025-07-22 05:14:27] Arguments: --nthreads 8
[2025-07-22 05:14:27] Threads: 8
[2025-07-22 05:14:27] Checking for CVMFS
[2025-07-22 05:14:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-22 05:14:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-22 05:14:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-22 08:44:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-22 08:44:04] 2.11.2.0 16148 101781 107224 148605 0 229 16826430 25165825 2525 130560 0 62771643 99.824 47058368 3352 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-22 08:44:04] CVMFS is ok
[2025-07-22 08:44:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 08:44:04] Checking for apptainer binary...
[2025-07-22 08:44:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-22 08:44:04] Running /usr/bin/apptainer --version
[2025-07-22 08:44:04] apptainer version 1.3.2-1.el7
[2025-07-22 08:44:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 08:44:11] cg-vwn372.simple-grid.lan
[2025-07-22 08:44:11] apptainer works
[2025-07-22 08:44:11] Set ATHENA_PROC_NUMBER=8
[2025-07-22 08:44:11] Set ATHENA_CORE_NUMBER=8
[2025-07-22 08:44:11] Starting ATLAS job with PandaID=6741690627
[2025-07-22 08:44:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 19:05:25]  *** The last 200 lines of the pilot log: ***
[2025-07-22 19:05:25] 2025-07-22 12:01:46,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 19:05:25] 2025-07-22 12:01:46,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 19:05:25] 2025-07-22 12:01:46,203 | INFO     | fitting pss+swap vs Time
[2025-07-22 19:05:25] 2025-07-22 12:01:46,203 | INFO     | sum of square deviations: 9059954057.0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,206 | INFO     | sum of deviations: 4974632410.999989
[2025-07-22 19:05:25] 2025-07-22 12:01:46,207 | INFO     | mean x: 1753176218.5
[2025-07-22 19:05:25] 2025-07-22 12:01:46,207 | INFO     | mean y: 2543775.051948052
[2025-07-22 19:05:25] 2025-07-22 12:01:46,207 | INFO     | -- intersect: -960088836.9761527
[2025-07-22 19:05:25] 2025-07-22 12:01:46,207 | INFO     | intersect: -960088836.9761527
[2025-07-22 19:05:25] 2025-07-22 12:01:46,207 | INFO     | chi2: 2.383577669756766
[2025-07-22 19:05:25] 2025-07-22 12:01:46,208 | INFO     | sum of square deviations: 8625843592.0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,219 | INFO     | sum of deviations: 25035174700.000004
[2025-07-22 19:05:25] 2025-07-22 12:01:46,219 | INFO     | mean x: 1753176066.0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,219 | INFO     | mean y: 2550725.8613861385
[2025-07-22 19:05:25] 2025-07-22 12:01:46,219 | INFO     | -- intersect: -5085771201.616561
[2025-07-22 19:05:25] 2025-07-22 12:01:46,219 | INFO     | intersect: -5085771201.616561
[2025-07-22 19:05:25] 2025-07-22 12:01:46,220 | INFO     | chi2: 1.6159373325538018
[2025-07-22 19:05:25] 2025-07-22 12:01:46,220 | INFO     | current chi2=1.6159373325538018 (change=32.20538382041893 %)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,220 | INFO     | sum of square deviations: 8205826414.5
[2025-07-22 19:05:25] 2025-07-22 12:01:46,223 | INFO     | sum of deviations: 24045299426.499996
[2025-07-22 19:05:25] 2025-07-22 12:01:46,223 | INFO     | mean x: 1753175913.5
[2025-07-22 19:05:25] 2025-07-22 12:01:46,223 | INFO     | mean y: 2550366.6812080536
[2025-07-22 19:05:25] 2025-07-22 12:01:46,223 | INFO     | -- intersect: -5134731079.212478
[2025-07-22 19:05:25] 2025-07-22 12:01:46,224 | INFO     | intersect: -5134731079.212478
[2025-07-22 19:05:25] 2025-07-22 12:01:46,224 | INFO     | chi2: 1.6161218240348256
[2025-07-22 19:05:25] 2025-07-22 12:01:46,224 | INFO     | current chi2=1.6161218240348256 (change=-0.01141699478730857 %)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,224 | INFO     | right removable region: 297
[2025-07-22 19:05:25] 2025-07-22 12:01:46,225 | INFO     | sum of square deviations: 8625843592.0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,228 | INFO     | sum of deviations: -44454096602.0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,228 | INFO     | mean x: 1753176371.0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,228 | INFO     | mean y: 2561018.0330033004
[2025-07-22 19:05:25] 2025-07-22 12:01:46,228 | INFO     | -- intersect: 9037720411.493263
[2025-07-22 19:05:25] 2025-07-22 12:01:46,228 | INFO     | intersect: 9037720411.493263
[2025-07-22 19:05:25] 2025-07-22 12:01:46,228 | INFO     | chi2: 0.923048108610569
[2025-07-22 19:05:25] 2025-07-22 12:01:46,229 | INFO     | current chi2=0.923048108610569 (change=61.27467880227447 %)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,229 | INFO     | sum of square deviations: 8205826414.5
[2025-07-22 19:05:25] 2025-07-22 12:01:46,250 | INFO     | sum of deviations: -46501057650.5
[2025-07-22 19:05:25] 2025-07-22 12:01:46,250 | INFO     | mean x: 1753176523.5
[2025-07-22 19:05:25] 2025-07-22 12:01:46,250 | INFO     | mean y: 2561743.848993289
[2025-07-22 19:05:25] 2025-07-22 12:01:46,250 | INFO     | -- intersect: 9937522401.403208
[2025-07-22 19:05:25] 2025-07-22 12:01:46,250 | INFO     | intersect: 9937522401.403208
[2025-07-22 19:05:25] 2025-07-22 12:01:46,251 | INFO     | chi2: 0.9067672089577566
[2025-07-22 19:05:25] 2025-07-22 12:01:46,251 | INFO     | current chi2=0.9067672089577566 (change=1.7638191878556981 %)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,251 | INFO     | left removable region: 20
[2025-07-22 19:05:25] 2025-07-22 12:01:46,252 | INFO     | sum of square deviations: 6590404498.0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,254 | INFO     | sum of deviations: -9137997213.000004
[2025-07-22 19:05:25] 2025-07-22 12:01:46,254 | INFO     | mean x: 1753176493.0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,254 | INFO     | mean y: 2562084.5812274367
[2025-07-22 19:05:25] 2025-07-22 12:01:46,254 | INFO     | -- intersect: 2433448066.1310534
[2025-07-22 19:05:25] 2025-07-22 12:01:46,254 | INFO     | intersect: 2433448066.1310534
[2025-07-22 19:05:25] 2025-07-22 12:01:46,255 | INFO     | chi2: 0.07587239679791277
[2025-07-22 19:05:25] 2025-07-22 12:01:46,255 | INFO     | -- intersect: 2433448066.1310534
[2025-07-22 19:05:25] 2025-07-22 12:01:46,255 | INFO     | current memory leak: -1.39 B/s (using 277 data points, chi2=0.08)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,262 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,262 | INFO     | ..............................
[2025-07-22 19:05:25] 2025-07-22 12:01:46,262 | INFO     | . Timing measurements:
[2025-07-22 19:05:25] 2025-07-22 12:01:46,262 | INFO     | . get job = 0 s
[2025-07-22 19:05:25] 2025-07-22 12:01:46,262 | INFO     | . initial setup = 1 s
[2025-07-22 19:05:25] 2025-07-22 12:01:46,262 | INFO     | . payload setup = 11 s
[2025-07-22 19:05:25] 2025-07-22 12:01:46,262 | INFO     | . stage-in = 0 s
[2025-07-22 19:05:25] 2025-07-22 12:01:46,263 | INFO     | . payload execution = 18774 s
[2025-07-22 19:05:25] 2025-07-22 12:01:46,263 | INFO     | . stage-out = 4 s
[2025-07-22 19:05:25] 2025-07-22 12:01:46,263 | INFO     | . log creation = 1 s
[2025-07-22 19:05:25] 2025-07-22 12:01:46,263 | INFO     | ..............................
[2025-07-22 19:05:25] 2025-07-22 12:01:46,382 | INFO     | 
[2025-07-22 19:05:25] 2025-07-22 12:01:46,382 | INFO     | job summary report
[2025-07-22 19:05:25] 2025-07-22 12:01:46,382 | INFO     | --------------------------------------------------
[2025-07-22 19:05:25] 2025-07-22 12:01:46,382 | INFO     | PanDA job id: 6741690627
[2025-07-22 19:05:25] 2025-07-22 12:01:46,382 | INFO     | task id: 45697523
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | errors: (none)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | pilot state: finished 
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | transexitcode: 0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | exeerrorcode: 0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | exeerrordiag: 
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | exitcode: 0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | exitmsg: OK
[2025-07-22 19:05:25] 2025-07-22 12:01:46,383 | INFO     | cpuconsumptiontime: 73556 s
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | nevents: 400
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | neventsw: 0
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | pid: 2817
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | pgrp: 2817
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | corecount: 8
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | event service: False
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | sizes: {0: 2397566, 11: 2397828, 22: 2397856, 18790: 2429984, 18795: 2439028, 18890: 2439166}
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | --------------------------------------------------
[2025-07-22 19:05:25] 2025-07-22 12:01:46,384 | INFO     | 
[2025-07-22 19:05:25] 2025-07-22 12:01:46,385 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-07-22 19:05:25] 2025-07-22 12:01:46,838 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,838 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,840 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,840 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,840 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 19:05:25] 2025-07-22 12:01:46,840 | INFO     | job 6741690627 has completed (purged errors)
[2025-07-22 19:05:25] 2025-07-22 12:01:46,841 | INFO     | overall cleanup function is called
[2025-07-22 19:05:25] 2025-07-22 12:01:47,849 | INFO     | --- collectZombieJob: --- 10, [2817]
[2025-07-22 19:05:25] 2025-07-22 12:01:47,849 | INFO     | zombie collector waiting for pid 2817
[2025-07-22 19:05:25] 2025-07-22 12:01:47,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 19:05:25] 2025-07-22 12:01:47,849 | INFO     | collected zombie processes
[2025-07-22 19:05:25] 2025-07-22 12:01:47,849 | INFO     | will attempt to kill all subprocesses of pid=2817
[2025-07-22 19:05:25] 2025-07-22 12:01:48,001 | INFO     | process IDs to be killed: [2817] (in reverse order)
[2025-07-22 19:05:25] 2025-07-22 12:01:48,787 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 19:05:25] 2025-07-22 12:01:48,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 19:05:25] 2025-07-22 12:01:48,791 | INFO     | did not find any defunct processes belonging to 2817
[2025-07-22 19:05:25] 2025-07-22 12:01:48,794 | INFO     | did not find any defunct processes belonging to 2817
[2025-07-22 19:05:25] 2025-07-22 12:01:48,794 | INFO     | ready for new job
[2025-07-22 19:05:25] 2025-07-22 12:01:48,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 19:05:25] 2025-07-22 12:01:48,796 | INFO     | ***************************************
[2025-07-22 19:05:25] 2025-07-22 12:01:48,796 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 19:05:25] 2025-07-22 12:01:48,796 | INFO     | ***************************************
[2025-07-22 19:05:25] 2025-07-22 12:01:48,796 | INFO     | 
[2025-07-22 19:05:25] 2025-07-22 12:01:48,797 | INFO     | pilot is running in a VM
[2025-07-22 19:05:25] 2025-07-22 12:01:48,797 | INFO     | architecture information:
[2025-07-22 19:05:25] 2025-07-22 12:01:48,813 | INFO     | executing command: cat /etc/os-release
[2025-07-22 19:05:25] 2025-07-22 12:01:49,040 | INFO     | cat /etc/os-release:
[2025-07-22 19:05:25] NAME="CentOS Linux"
[2025-07-22 19:05:25] VERSION="7 (Core)"
[2025-07-22 19:05:25] ID="centos"
[2025-07-22 19:05:25] ID_LIKE="rhel fedora"
[2025-07-22 19:05:25] VERSION_ID="7"
[2025-07-22 19:05:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 19:05:25] ANSI_COLOR="0;31"
[2025-07-22 19:05:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 19:05:25] HOME_URL="https://www.centos.org/"
[2025-07-22 19:05:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 19:05:25] 
[2025-07-22 19:05:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 19:05:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 19:05:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 19:05:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 19:05:25] 
[2025-07-22 19:05:25] 2025-07-22 12:01:49,041 | INFO     | ***************************************
[2025-07-22 19:05:25] 2025-07-22 12:01:49,544 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-07-22 19:05:25] 2025-07-22 12:01:49,776 | INFO     | sufficient remaining disk space (497195941888 B)
[2025-07-22 19:05:25] 2025-07-22 12:01:49,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 19:05:25] 2025-07-22 12:01:49,777 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 19:05:25] 2025-07-22 12:01:49,777 | INFO     | update_server=False
[2025-07-22 19:05:25] 2025-07-22 12:01:49,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 19:05:25] 2025-07-22 12:01:49,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 19:05:25] 2025-07-22 12:01:50,288 | INFO     | all data control threads have been joined
[2025-07-22 19:05:25] 2025-07-22 12:01:50,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 19:05:25] 2025-07-22 12:01:50,497 | INFO     | aborting loop
[2025-07-22 19:05:25] 2025-07-22 12:01:50,783 | INFO     | [job] retrieve thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:50,901 | INFO     | all payload control threads have been joined
[2025-07-22 19:05:25] 2025-07-22 12:01:51,046 | INFO     | all job control threads have been joined
[2025-07-22 19:05:25] 2025-07-22 12:01:51,141 | INFO     | [payload] failed_post thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,142 | INFO     | [data] copytool_in thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,294 | INFO     | [data] control thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,365 | INFO     | [payload] validate_post thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 19:05:25] 2025-07-22 12:01:51,466 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,503 | INFO     | [job] job monitor thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,766 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,787 | INFO     | [data] copytool_out thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,907 | INFO     | [payload] control thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:51,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 19:05:25] 2025-07-22 12:01:52,053 | INFO     | [job] control thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:52,109 | INFO     | [job] validate thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:52,183 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:52,403 | INFO     | [job] queue monitor thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:01:56,008 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:02:00,462 | INFO     | job.realtimelogging is not enabled
[2025-07-22 19:05:25] 2025-07-22 12:02:01,468 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 19:05:25] 2025-07-22 12:02:03,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321980585792)>', '<ExcThread(monitor, started 140321371432704)>']
[2025-07-22 19:05:25] 2025-07-22 12:02:08,603 | INFO     | all workflow threads have been joined
[2025-07-22 19:05:25] 2025-07-22 12:02:08,603 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 19:05:25] 2025-07-22 12:02:08,603 | INFO     | traces error code: 0
[2025-07-22 19:05:25] 2025-07-22 12:02:08,604 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 19:05:25] 2025-07-22 12:02:19,667 | INFO     | PID=28632 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-22 19:05:25] 2025-07-22 12:02:19,667 | INFO     | .. there are 9 such processes running
[2025-07-22 19:05:25] 2025-07-22 12:02:19,668 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 19:05:25] 2025-07-22 12:02:19,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 19:05:25] 2025-07-22 12:02:19,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 19:05:25] 2025-07-22 12:02:19,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 19:05:25] 2025-07-22 12:02:19,668 | INFO     | [monitor] control thread has ended
[2025-07-22 19:05:25] 2025-07-22 12:02:20,009 [wrapper] ==== pilot stdout END ====
[2025-07-22 19:05:25] 2025-07-22 12:02:20,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 19:05:25] 2025-07-22 12:02:20,192 [wrapper] pilotpid: 28632
[2025-07-22 19:05:25] 2025-07-22 12:02:20,286 [wrapper] Pilot exit status: 0
[2025-07-22 19:05:25] 2025-07-22 12:02:20,722 [wrapper] pandaids: 6741690627
[2025-07-22 19:05:25] 2025-07-22 12:02:21,649 [wrapper] cleanup supervisor_pilot 23568 28633
[2025-07-22 19:05:25] 2025-07-22 12:02:21,732 [wrapper] Test setup, not cleaning
[2025-07-22 19:05:25] 2025-07-22 12:02:21,852 [wrapper] apfmon messages muted
[2025-07-22 19:05:25] 2025-07-22 12:02:21,996 [wrapper] ==== wrapper stdout END ====
[2025-07-22 19:05:25] 2025-07-22 12:02:22,084 [wrapper] ==== wrapper stderr END ====
[2025-07-22 19:05:25]  *** Error codes and diagnostics ***
[2025-07-22 19:05:25]     "exeErrorCode": 0,
[2025-07-22 19:05:25]     "exeErrorDiag": "",
[2025-07-22 19:05:25]     "pilotErrorCode": 0,
[2025-07-22 19:05:25]     "pilotErrorDiag": "",
[2025-07-22 19:05:25]  *** Listing of results directory ***
[2025-07-22 19:05:25] total 579528
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc    530466 Jul 21 22:41 pilot3.tar.gz
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc      5112 Jul 21 22:54 queuedata.json
[2025-07-22 19:05:25] -rwx------. 1 boinc boinc     36292 Jul 21 22:54 runpilot2-wrapper.sh
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc       100 Jul 22 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 19:05:25] -rwxr-xr-x. 1 boinc boinc      7986 Jul 22 05:14 run_atlas
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc       105 Jul 22 05:14 job.xml
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc      6391 Jul 22 05:14 init_data.xml
[2025-07-22 19:05:25] -rw-r--r--. 2 boinc boinc 316952758 Jul 22 05:14 EVNT.45697521._000149.pool.root.1
[2025-07-22 19:05:25] -rw-r--r--. 2 boinc boinc     15095 Jul 22 05:14 start_atlas.sh
[2025-07-22 19:05:25] drwxrwx--x. 2 boinc boinc        68 Jul 22 05:14 shared
[2025-07-22 19:05:25] -rw-r--r--. 2 boinc boinc    542906 Jul 22 05:14 input.tar.gz
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc         0 Jul 22 05:14 boinc_lockfile
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc      2635 Jul 22 08:44 pandaJob.out
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc    977326 Jul 22 08:46 agis_schedconf.cvmfs.json
[2025-07-22 19:05:25] drwx------. 4 boinc boinc      4096 Jul 22 08:46 pilot3
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc 268544903 Jul 22 13:58 HITS.45697523._003709.pool.root.1
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc       531 Jul 22 13:58 boinc_task_state.xml
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc      1014 Jul 22 14:00 memory_monitor_summary.json
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc   1593031 Jul 22 14:00 agis_ddmendpoints.agis.ALL.json
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc    422529 Jul 22 14:00 log.45697523._003709.job.log.tgz.1
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc      7768 Jul 22 14:01 heartbeat.json
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc       820 Jul 22 14:02 pilotlog.txt
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc        95 Jul 22 14:02 pilot_heartbeat.json
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc   1615305 Jul 22 14:02 log.45697523._003709.job.log.1
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc       357 Jul 22 14:02 output.list
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc       620 Jul 22 14:02 runtime_log
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc   2058240 Jul 22 14:02 result.tar.gz
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc       657 Jul 22 14:02 VgWKDmphCy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUXGLDm39AcQm.diag
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc      8674 Jul 22 14:02 runtime_log.err
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc      8192 Jul 22 19:05 boinc_mmap_file
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc        28 Jul 22 19:05 wrapper_checkpoint.txt
[2025-07-22 19:05:25] -rw-r--r--. 1 boinc boinc     20538 Jul 22 19:05 stderr.txt
[2025-07-22 19:05:25] HITS file was successfully produced:
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc 268544903 Jul 22 13:58 shared/HITS.pool.root.1
[2025-07-22 19:05:25]  *** Contents of shared directory: ***
[2025-07-22 19:05:25] total 574340
[2025-07-22 19:05:25] -rw-r--r--. 2 boinc boinc 316952758 Jul 22 05:14 ATLAS.root_0
[2025-07-22 19:05:25] -rw-r--r--. 2 boinc boinc     15095 Jul 22 05:14 start_atlas.sh
[2025-07-22 19:05:25] -rw-r--r--. 2 boinc boinc    542906 Jul 22 05:14 input.tar.gz
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc 268544903 Jul 22 13:58 HITS.pool.root.1
[2025-07-22 19:05:25] -rw-------. 1 boinc boinc   2058240 Jul 22 14:02 result.tar.gz
19:05:27 (21610): run_atlas exited; CPU time 73790.165527
19:05:27 (21610): called boinc_finish(0)

</stderr_txt>
]]>

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