Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:57 (2329443): wrapper (7.7.26015): starting
11:37:57 (2329443): wrapper: running run_atlas (--nthreads 4)
[2025-07-22 11:37:57] Arguments: --nthreads 4
[2025-07-22 11:37:57] Threads: 4
[2025-07-22 11:37:57] Checking for CVMFS
[2025-07-22 11:37:57] No cvmfs_config command found, will try listing directly
[2025-07-22 11:37:57] CVMFS is ok
[2025-07-22 11:37:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 11:37:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 11:37:57] Further information can be found at the LHC@home message board.
[2025-07-22 11:37:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 11:37:57] Checking for apptainer binary...
[2025-07-22 11:37:57] which: no apptainer in ((null))
[2025-07-22 11:37:57] apptainer is not installed, using version from CVMFS
[2025-07-22 11:37:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 11:37:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-07-22 11:37:57] apptainer works
[2025-07-22 11:37:57] Set ATHENA_PROC_NUMBER=4
[2025-07-22 11:37:57] Set ATHENA_CORE_NUMBER=4
[2025-07-22 11:37:58] Starting ATLAS job with PandaID=6741689886
[2025-07-22 11:37:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:50:39 (2378652): wrapper (7.7.26015): starting
11:50:39 (2378652): wrapper: running run_atlas (--nthreads 4)
[2025-07-22 11:50:39] Arguments: --nthreads 4
[2025-07-22 11:50:39] Threads: 4
[2025-07-22 11:50:39] This job has been restarted, cleaning up previous attempt
[2025-07-22 11:50:39] Checking for CVMFS
[2025-07-22 11:50:39] No cvmfs_config command found, will try listing directly
[2025-07-22 11:50:39] CVMFS is ok
[2025-07-22 11:50:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 11:50:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 11:50:39] Further information can be found at the LHC@home message board.
[2025-07-22 11:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 11:50:39] Checking for apptainer binary...
[2025-07-22 11:50:39] which: no apptainer in ((null))
[2025-07-22 11:50:39] apptainer is not installed, using version from CVMFS
[2025-07-22 11:50:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 11:50:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-07-22 11:50:39] apptainer works
[2025-07-22 11:50:40] Set ATHENA_PROC_NUMBER=4
[2025-07-22 11:50:40] Set ATHENA_CORE_NUMBER=4
[2025-07-22 11:50:40] Starting ATLAS job with PandaID=6741689886
[2025-07-22 11:50:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 15:54:49]  *** The last 200 lines of the pilot log: ***
[2025-07-22 15:54:49] 2025-07-22 13:54:03,084 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 15:54:49] 2025-07-22 13:54:03,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 15:54:49] 2025-07-22 13:54:03,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 15:54:49] 2025-07-22 13:54:03,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 15:54:49] 2025-07-22 13:54:03,090 | INFO     | fitting pss+swap vs Time
[2025-07-22 15:54:49] 2025-07-22 13:54:03,090 | INFO     | sum of square deviations: 4233158440.0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,092 | INFO     | sum of deviations: 10727828439.999996
[2025-07-22 15:54:49] 2025-07-22 13:54:03,092 | INFO     | mean x: 1753185135.0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,092 | INFO     | mean y: 2343939.9832635983
[2025-07-22 15:54:49] 2025-07-22 13:54:03,092 | INFO     | -- intersect: -4440643398.76568
[2025-07-22 15:54:49] 2025-07-22 13:54:03,092 | INFO     | intersect: -4440643398.76568
[2025-07-22 15:54:49] 2025-07-22 13:54:03,093 | INFO     | chi2: 2.144781775061035
[2025-07-22 15:54:49] 2025-07-22 13:54:03,093 | INFO     | sum of square deviations: 3972995422.5
[2025-07-22 15:54:49] 2025-07-22 13:54:03,095 | INFO     | sum of deviations: 25251320727.499996
[2025-07-22 15:54:49] 2025-07-22 13:54:03,095 | INFO     | mean x: 1753184982.5
[2025-07-22 15:54:49] 2025-07-22 13:54:03,095 | INFO     | mean y: 2352304.183760684
[2025-07-22 15:54:49] 2025-07-22 13:54:03,095 | INFO     | -- intersect: -11140433322.256
[2025-07-22 15:54:49] 2025-07-22 13:54:03,095 | INFO     | intersect: -11140433322.256
[2025-07-22 15:54:49] 2025-07-22 13:54:03,096 | INFO     | chi2: 1.366295314618797
[2025-07-22 15:54:49] 2025-07-22 13:54:03,096 | INFO     | current chi2=1.366295314618797 (change=36.29676778748664 %)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,096 | INFO     | sum of square deviations: 3723716330.0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,098 | INFO     | sum of deviations: 24543203721.999996
[2025-07-22 15:54:49] 2025-07-22 13:54:03,098 | INFO     | mean x: 1753184830.0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,098 | INFO     | mean y: 2351870.9126637555
[2025-07-22 15:54:49] 2025-07-22 13:54:03,098 | INFO     | -- intersect: -11552978511.896042
[2025-07-22 15:54:49] 2025-07-22 13:54:03,098 | INFO     | intersect: -11552978511.896042
[2025-07-22 15:54:49] 2025-07-22 13:54:03,099 | INFO     | chi2: 1.3669493553138203
[2025-07-22 15:54:49] 2025-07-22 13:54:03,099 | INFO     | current chi2=1.3669493553138203 (change=-0.04786964340910179 %)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,099 | INFO     | right removable region: 228
[2025-07-22 15:54:49] 2025-07-22 13:54:03,099 | INFO     | sum of square deviations: 3972995422.5
[2025-07-22 15:54:49] 2025-07-22 13:54:03,101 | INFO     | sum of deviations: -19552651439.499992
[2025-07-22 15:54:49] 2025-07-22 13:54:03,101 | INFO     | mean x: 1753185287.5
[2025-07-22 15:54:49] 2025-07-22 13:54:03,101 | INFO     | mean y: 2361491.371794872
[2025-07-22 15:54:49] 2025-07-22 13:54:03,101 | INFO     | -- intersect: 8630466281.328192
[2025-07-22 15:54:49] 2025-07-22 13:54:03,101 | INFO     | intersect: 8630466281.328192
[2025-07-22 15:54:49] 2025-07-22 13:54:03,102 | INFO     | chi2: 0.8505688617472186
[2025-07-22 15:54:49] 2025-07-22 13:54:03,102 | INFO     | current chi2=0.8505688617472186 (change=60.34240538420216 %)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,102 | INFO     | sum of square deviations: 3723716330.0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,104 | INFO     | sum of deviations: -15742741225.0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,104 | INFO     | mean x: 1753185440.0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,104 | INFO     | mean y: 2359147.1615720526
[2025-07-22 15:54:49] 2025-07-22 13:54:03,104 | INFO     | -- intersect: 7414294497.60696
[2025-07-22 15:54:49] 2025-07-22 13:54:03,104 | INFO     | intersect: 7414294497.60696
[2025-07-22 15:54:49] 2025-07-22 13:54:03,104 | INFO     | chi2: 0.8403874441532558
[2025-07-22 15:54:49] 2025-07-22 13:54:03,105 | INFO     | current chi2=0.8403874441532558 (change=1.1970127348711437 %)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,105 | INFO     | left removable region: 20
[2025-07-22 15:54:49] 2025-07-22 13:54:03,105 | INFO     | sum of square deviations: 2790348132.0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,106 | INFO     | sum of deviations: 6962895477.500002
[2025-07-22 15:54:49] 2025-07-22 13:54:03,107 | INFO     | mean x: 1753185409.5
[2025-07-22 15:54:49] 2025-07-22 13:54:03,107 | INFO     | mean y: 2362099.985576923
[2025-07-22 15:54:49] 2025-07-22 13:54:03,107 | INFO     | -- intersect: -4372449278.936134
[2025-07-22 15:54:49] 2025-07-22 13:54:03,107 | INFO     | intersect: -4372449278.936134
[2025-07-22 15:54:49] 2025-07-22 13:54:03,107 | INFO     | chi2: 0.00100888040982118
[2025-07-22 15:54:49] 2025-07-22 13:54:03,107 | INFO     | -- intersect: -4372449278.936134
[2025-07-22 15:54:49] 2025-07-22 13:54:03,107 | INFO     | current memory leak: 2.50 B/s (using 208 data points, chi2=0.00)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,108 | INFO     | could have reported an average CPU frequency of 2606 MHz (12 samples)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,108 | INFO     | ..............................
[2025-07-22 15:54:49] 2025-07-22 13:54:03,108 | INFO     | . Timing measurements:
[2025-07-22 15:54:49] 2025-07-22 13:54:03,109 | INFO     | . get job = 0 s
[2025-07-22 15:54:49] 2025-07-22 13:54:03,109 | INFO     | . initial setup = 1 s
[2025-07-22 15:54:49] 2025-07-22 13:54:03,109 | INFO     | . payload setup = 7 s
[2025-07-22 15:54:49] 2025-07-22 13:54:03,109 | INFO     | . stage-in = 0 s
[2025-07-22 15:54:49] 2025-07-22 13:54:03,109 | INFO     | . payload execution = 14557 s
[2025-07-22 15:54:49] 2025-07-22 13:54:03,109 | INFO     | . stage-out = 1 s
[2025-07-22 15:54:49] 2025-07-22 13:54:03,109 | INFO     | . log creation = 0 s
[2025-07-22 15:54:49] 2025-07-22 13:54:03,109 | INFO     | ..............................
[2025-07-22 15:54:49] 2025-07-22 13:54:03,214 | INFO     | 
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | job summary report
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | --------------------------------------------------
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | PanDA job id: 6741689886
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | task id: 45697523
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | errors: (none)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | pilot state: finished 
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | transexitcode: 0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | exeerrorcode: 0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | exeerrordiag: 
[2025-07-22 15:54:49] 2025-07-22 13:54:03,215 | INFO     | exitcode: 0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | exitmsg: OK
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | cpuconsumptiontime: 56215 s
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | nevents: 400
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | neventsw: 0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | pid: 2389768
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | pgrp: 2389768
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | corecount: 4
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | event service: False
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | sizes: {0: 2397563, 4: 2397825, 11: 2397853, 14568: 2428835, 14569: 2437855, 14571: 2437911, 14578: 2438233}
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | --------------------------------------------------
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | 
[2025-07-22 15:54:49] 2025-07-22 13:54:03,216 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-07-22 15:54:49] 2025-07-22 13:54:03,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | job 6741689886 has completed (purged errors)
[2025-07-22 15:54:49] 2025-07-22 13:54:03,238 | INFO     | overall cleanup function is called
[2025-07-22 15:54:49] 2025-07-22 13:54:04,246 | INFO     | --- collectZombieJob: --- 10, [2389768]
[2025-07-22 15:54:49] 2025-07-22 13:54:04,246 | INFO     | zombie collector waiting for pid 2389768
[2025-07-22 15:54:49] 2025-07-22 13:54:04,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 15:54:49] 2025-07-22 13:54:04,246 | INFO     | collected zombie processes
[2025-07-22 15:54:49] 2025-07-22 13:54:04,246 | INFO     | will attempt to kill all subprocesses of pid=2389768
[2025-07-22 15:54:49] 2025-07-22 13:54:04,589 | INFO     | process IDs to be killed: [2389768] (in reverse order)
[2025-07-22 15:54:49] 2025-07-22 13:54:04,700 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 15:54:49] 2025-07-22 13:54:04,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 15:54:49] 2025-07-22 13:54:04,713 | INFO     | did not find any defunct processes belonging to 2389768
[2025-07-22 15:54:49] 2025-07-22 13:54:04,724 | INFO     | did not find any defunct processes belonging to 2389768
[2025-07-22 15:54:49] 2025-07-22 13:54:04,724 | INFO     | ready for new job
[2025-07-22 15:54:49] 2025-07-22 13:54:04,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 15:54:49] 2025-07-22 13:54:04,726 | INFO     | ***************************************
[2025-07-22 15:54:49] 2025-07-22 13:54:04,727 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 15:54:49] 2025-07-22 13:54:04,728 | INFO     | ***************************************
[2025-07-22 15:54:49] 2025-07-22 13:54:04,728 | INFO     | 
[2025-07-22 15:54:49] 2025-07-22 13:54:04,731 | INFO     | architecture information:
[2025-07-22 15:54:49] 2025-07-22 13:54:04,732 | INFO     | executing command: cat /etc/os-release
[2025-07-22 15:54:49] 2025-07-22 13:54:04,747 | INFO     | cat /etc/os-release:
[2025-07-22 15:54:49] NAME="CentOS Linux"
[2025-07-22 15:54:49] VERSION="7 (Core)"
[2025-07-22 15:54:49] ID="centos"
[2025-07-22 15:54:49] ID_LIKE="rhel fedora"
[2025-07-22 15:54:49] VERSION_ID="7"
[2025-07-22 15:54:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 15:54:49] ANSI_COLOR="0;31"
[2025-07-22 15:54:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 15:54:49] HOME_URL="https://www.centos.org/"
[2025-07-22 15:54:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 15:54:49] 
[2025-07-22 15:54:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 15:54:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 15:54:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 15:54:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 15:54:49] 
[2025-07-22 15:54:49] 2025-07-22 13:54:04,747 | INFO     | ***************************************
[2025-07-22 15:54:49] 2025-07-22 13:54:05,250 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-07-22 15:54:49] 2025-07-22 13:54:05,267 | INFO     | sufficient remaining disk space (627745751040 B)
[2025-07-22 15:54:49] 2025-07-22 13:54:05,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 15:54:49] 2025-07-22 13:54:05,268 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 15:54:49] 2025-07-22 13:54:05,268 | INFO     | update_server=False
[2025-07-22 15:54:49] 2025-07-22 13:54:05,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 15:54:49] 2025-07-22 13:54:05,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 15:54:49] 2025-07-22 13:54:05,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 15:54:49] 2025-07-22 13:54:05,269 | INFO     | aborting loop
[2025-07-22 15:54:49] 2025-07-22 13:54:05,757 | INFO     | all data control threads have been joined
[2025-07-22 15:54:49] 2025-07-22 13:54:05,761 | INFO     | all payload control threads have been joined
[2025-07-22 15:54:49] 2025-07-22 13:54:06,273 | INFO     | [job] retrieve thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,274 | INFO     | [job] job monitor thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,327 | INFO     | [payload] failed_post thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,491 | INFO     | [job] validate thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 15:54:49] 2025-07-22 13:54:06,670 | INFO     | all job control threads have been joined
[2025-07-22 15:54:49] 2025-07-22 13:54:06,694 | INFO     | [data] copytool_in thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,709 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,762 | INFO     | [data] control thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,766 | INFO     | [payload] control thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,848 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:06,872 | INFO     | [payload] validate_post thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:07,274 | INFO     | [data] copytool_out thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:07,440 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:07,675 | INFO     | [job] control thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:07,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:08,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 15:54:49] 2025-07-22 13:54:09,229 | INFO     | [job] queue monitor thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:10,655 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 15:54:49] 2025-07-22 13:54:11,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22765190444864)>', '<ExcThread(monitor, started 22764956120832)>']
[2025-07-22 15:54:49] 2025-07-22 13:54:16,746 | INFO     | all workflow threads have been joined
[2025-07-22 15:54:49] 2025-07-22 13:54:16,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 15:54:49] 2025-07-22 13:54:16,747 | INFO     | traces error code: 0
[2025-07-22 15:54:49] 2025-07-22 13:54:16,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 15:54:49] 2025-07-22 13:54:36,181 | INFO     | PID=2382360 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 15:54:49] 2025-07-22 13:54:36,182 | INFO     | .. there are 8 such processes running
[2025-07-22 15:54:49] 2025-07-22 13:54:36,183 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 15:54:49] 2025-07-22 13:54:36,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 15:54:49] 2025-07-22 13:54:36,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 15:54:49] 2025-07-22 13:54:36,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 15:54:49] 2025-07-22 13:54:36,183 | INFO     | [monitor] control thread has ended
[2025-07-22 15:54:49] 2025-07-22 13:54:36,355 [wrapper] ==== pilot stdout END ====
[2025-07-22 15:54:49] 2025-07-22 13:54:36,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 15:54:49] 2025-07-22 13:54:36,361 [wrapper] pilotpid: 2382360
[2025-07-22 15:54:49] 2025-07-22 13:54:36,364 [wrapper] Pilot exit status: 0
[2025-07-22 15:54:49] 2025-07-22 13:54:36,372 [wrapper] pandaids: 6741689886 6741689886
[2025-07-22 15:54:49] 2025-07-22 13:54:36,441 [wrapper] cleanup supervisor_pilot 2810216 2382361
[2025-07-22 15:54:49] 2025-07-22 13:54:36,444 [wrapper] Test setup, not cleaning
[2025-07-22 15:54:49] 2025-07-22 13:54:36,448 [wrapper] apfmon messages muted
[2025-07-22 15:54:49] 2025-07-22 13:54:36,451 [wrapper] ==== wrapper stdout END ====
[2025-07-22 15:54:49] 2025-07-22 13:54:36,453 [wrapper] ==== wrapper stderr END ====
[2025-07-22 15:54:49]  *** Error codes and diagnostics ***
[2025-07-22 15:54:49]     "exeErrorCode": 0,
[2025-07-22 15:54:49]     "exeErrorDiag": "",
[2025-07-22 15:54:49]     "pilotErrorCode": 0,
[2025-07-22 15:54:49]     "pilotErrorDiag": "",
[2025-07-22 15:54:49]  *** Listing of results directory ***
[2025-07-22 15:54:49] total 873740
[2025-07-22 15:54:49] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc    530466 Jul 21 22:41 pilot3.tar.gz
[2025-07-22 15:54:49] -rwx------ 1 boinc boinc     36292 Jul 21 22:48 runpilot2-wrapper.sh
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc      5112 Jul 21 22:48 queuedata.json
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc       100 Jul 22 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 15:54:49] -rwxr-xr-x 1 boinc boinc      7986 Jul 22 11:37 run_atlas
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc       105 Jul 22 11:37 job.xml
[2025-07-22 15:54:49] -rw-r--r-- 3 boinc boinc 315832842 Jul 22 11:37 EVNT.45697521._000133.pool.root.1
[2025-07-22 15:54:49] -rw-r--r-- 3 boinc boinc 315832842 Jul 22 11:37 ATLAS.root_0
[2025-07-22 15:54:49] -rw-r--r-- 2 boinc boinc     15095 Jul 22 11:37 start_atlas.sh
[2025-07-22 15:54:49] drwxrwx--x 2 boinc boinc      4096 Jul 22 11:37 shared
[2025-07-22 15:54:49] -rw-r--r-- 2 boinc boinc    542903 Jul 22 11:37 input.tar.gz
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc         0 Jul 22 11:37 boinc_lockfile
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc      2634 Jul 22 11:50 pandaJob.out
[2025-07-22 15:54:49] -rw------- 1 boinc boinc    976638 Jul 22 11:50 agis_schedconf.cvmfs.json
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc      6642 Jul 22 12:39 init_data.xml
[2025-07-22 15:54:49] -rw------- 1 boinc boinc 255775690 Jul 22 15:53 HITS.45697523._003379.pool.root.1
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc       530 Jul 22 15:53 boinc_task_state.xml
[2025-07-22 15:54:49] -rw------- 1 boinc boinc      1050 Jul 22 15:53 memory_monitor_summary.json
[2025-07-22 15:54:49] -rw------- 1 boinc boinc   1593031 Jul 22 15:53 agis_ddmendpoints.agis.ALL.json
[2025-07-22 15:54:49] -rw------- 1 boinc boinc    333556 Jul 22 15:53 log.45697523._003379.job.log.tgz.1
[2025-07-22 15:54:49] -rw------- 1 boinc boinc      7848 Jul 22 15:54 heartbeat.json
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc        27 Jul 22 15:54 wrapper_checkpoint.txt
[2025-07-22 15:54:49] -rw------- 1 boinc boinc       822 Jul 22 15:54 pilotlog.txt
[2025-07-22 15:54:49] -rw------- 1 boinc boinc        96 Jul 22 15:54 pilot_heartbeat.json
[2025-07-22 15:54:49] -rw------- 1 boinc boinc   1361427 Jul 22 15:54 log.45697523._003379.job.log.1
[2025-07-22 15:54:49] -rw------- 1 boinc boinc       357 Jul 22 15:54 output.list
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc       620 Jul 22 15:54 runtime_log
[2025-07-22 15:54:49] -rw------- 1 boinc boinc   1710080 Jul 22 15:54 result.tar.gz
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc      9104 Jul 22 15:54 runtime_log.err
[2025-07-22 15:54:49] -rw------- 1 boinc boinc       793 Jul 22 15:54 Ro9KDmpbCy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVItKDmHEvSBn.diag
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc      8192 Jul 22 15:54 boinc_mmap_file
[2025-07-22 15:54:49] -rw-r--r-- 1 boinc boinc     22594 Jul 22 15:54 stderr.txt
[2025-07-22 15:54:49] HITS file was successfully produced:
[2025-07-22 15:54:49] -rw------- 1 boinc boinc 255775690 Jul 22 15:53 shared/HITS.pool.root.1
[2025-07-22 15:54:49]  *** Contents of shared directory: ***
[2025-07-22 15:54:49] total 560444
[2025-07-22 15:54:49] -rw-r--r-- 3 boinc boinc 315832842 Jul 22 11:37 ATLAS.root_0
[2025-07-22 15:54:49] -rw-r--r-- 2 boinc boinc     15095 Jul 22 11:37 start_atlas.sh
[2025-07-22 15:54:49] -rw-r--r-- 2 boinc boinc    542903 Jul 22 11:37 input.tar.gz
[2025-07-22 15:54:49] -rw------- 1 boinc boinc 255775690 Jul 22 15:53 HITS.pool.root.1
[2025-07-22 15:54:49] -rw------- 1 boinc boinc   1710080 Jul 22 15:54 result.tar.gz
15:54:51 (2378652): run_atlas exited; CPU time 56750.684327
15:54:51 (2378652): called boinc_finish(0)

</stderr_txt>
]]>

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