Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:56:10 (3035232): wrapper (7.7.26015): starting
14:56:10 (3035232): wrapper: running run_atlas (--nthreads 4)
[2025-07-22 14:56:10] Arguments: --nthreads 4
[2025-07-22 14:56:10] Threads: 4
[2025-07-22 14:56:10] Checking for CVMFS
[2025-07-22 14:56:10] No cvmfs_config command found, will try listing directly
[2025-07-22 14:56:10] CVMFS is ok
[2025-07-22 14:56:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 14:56:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 14:56:10] Further information can be found at the LHC@home message board.
[2025-07-22 14:56:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 14:56:10] Checking for apptainer binary...
[2025-07-22 14:56:10] which: no apptainer in ((null))
[2025-07-22 14:56:10] apptainer is not installed, using version from CVMFS
[2025-07-22 14:56:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 14:56:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-07-22 14:56:10] apptainer works
[2025-07-22 14:56:10] Set ATHENA_PROC_NUMBER=4
[2025-07-22 14:56:10] Set ATHENA_CORE_NUMBER=4
[2025-07-22 14:56:10] Starting ATLAS job with PandaID=6741685602
[2025-07-22 14:56:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:53:24 (3321839): wrapper (7.7.26015): starting
16:53:24 (3321839): wrapper: running run_atlas (--nthreads 4)
[2025-07-22 16:53:24] Arguments: --nthreads 4
[2025-07-22 16:53:24] Threads: 4
[2025-07-22 16:53:24] This job has been restarted, cleaning up previous attempt
[2025-07-22 16:53:24] Checking for CVMFS
[2025-07-22 16:53:24] No cvmfs_config command found, will try listing directly
[2025-07-22 16:53:24] CVMFS is ok
[2025-07-22 16:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-22 16:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-22 16:53:24] Further information can be found at the LHC@home message board.
[2025-07-22 16:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-22 16:53:24] Checking for apptainer binary...
[2025-07-22 16:53:24] which: no apptainer in ((null))
[2025-07-22 16:53:24] apptainer is not installed, using version from CVMFS
[2025-07-22 16:53:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-22 16:53:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-07-22 16:53:25] apptainer works
[2025-07-22 16:53:25] Set ATHENA_PROC_NUMBER=4
[2025-07-22 16:53:25] Set ATHENA_CORE_NUMBER=4
[2025-07-22 16:53:25] Starting ATLAS job with PandaID=6741685602
[2025-07-22 16:53:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 20:29:08]  *** The last 200 lines of the pilot log: ***
[2025-07-22 20:29:08] 2025-07-22 18:28:34,836 | INFO     | current chi2=1.3888755884790056 (change=-0.04505346294933704 %)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,836 | INFO     | right removable region: 205
[2025-07-22 20:29:08] 2025-07-22 18:28:34,836 | INFO     | sum of square deviations: 2710627567.5
[2025-07-22 20:29:08] 2025-07-22 18:28:34,837 | INFO     | sum of deviations: 3410285489.5
[2025-07-22 20:29:08] 2025-07-22 18:28:34,837 | INFO     | mean x: 1753202596.5
[2025-07-22 20:29:08] 2025-07-22 18:28:34,837 | INFO     | mean y: 2369094.140776699
[2025-07-22 20:29:08] 2025-07-22 18:28:34,837 | INFO     | -- intersect: -2203364163.605143
[2025-07-22 20:29:08] 2025-07-22 18:28:34,838 | INFO     | intersect: -2203364163.605143
[2025-07-22 20:29:08] 2025-07-22 18:28:34,838 | INFO     | chi2: 0.0066347304682056515
[2025-07-22 20:29:08] 2025-07-22 18:28:34,838 | INFO     | current chi2=0.0066347304682056515 (change=99.52207960892248 %)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,838 | INFO     | sum of square deviations: 2518000700.0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,839 | INFO     | sum of deviations: 2535919511.0000005
[2025-07-22 20:29:08] 2025-07-22 18:28:34,839 | INFO     | mean x: 1753202749.0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,840 | INFO     | mean y: 2369769.2089552237
[2025-07-22 20:29:08] 2025-07-22 18:28:34,840 | INFO     | -- intersect: -1763309270.4862826
[2025-07-22 20:29:08] 2025-07-22 18:28:34,840 | INFO     | intersect: -1763309270.4862826
[2025-07-22 20:29:08] 2025-07-22 18:28:34,840 | INFO     | chi2: 0.0027644206785679
[2025-07-22 20:29:08] 2025-07-22 18:28:34,840 | INFO     | current chi2=0.0027644206785679 (change=58.33409221647656 %)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,840 | INFO     | sum of square deviations: 2334722845.0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,841 | INFO     | sum of deviations: 3380018265.499999
[2025-07-22 20:29:08] 2025-07-22 18:28:34,842 | INFO     | mean x: 1753202901.5
[2025-07-22 20:29:08] 2025-07-22 18:28:34,842 | INFO     | mean y: 2369065.4846938774
[2025-07-22 20:29:08] 2025-07-22 18:28:34,842 | INFO     | -- intersect: -2535772814.134253
[2025-07-22 20:29:08] 2025-07-22 18:28:34,842 | INFO     | intersect: -2535772814.134253
[2025-07-22 20:29:08] 2025-07-22 18:28:34,842 | INFO     | chi2: 0.001633975858560471
[2025-07-22 20:29:08] 2025-07-22 18:28:34,842 | INFO     | current chi2=0.001633975858560471 (change=40.892648096998485 %)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,843 | INFO     | sum of square deviations: 2160561440.0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,844 | INFO     | sum of deviations: 4222313006.0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,844 | INFO     | mean x: 1753203054.0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,844 | INFO     | mean y: 2368324.4188481676
[2025-07-22 20:29:08] 2025-07-22 18:28:34,844 | INFO     | -- intersect: -3423857803.6671557
[2025-07-22 20:29:08] 2025-07-22 18:28:34,844 | INFO     | intersect: -3423857803.6671557
[2025-07-22 20:29:08] 2025-07-22 18:28:34,844 | INFO     | chi2: 0.00017366406469220138
[2025-07-22 20:29:08] 2025-07-22 18:28:34,844 | INFO     | current chi2=0.00017366406469220138 (change=89.37168723868423 %)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,845 | INFO     | sum of square deviations: 1995283922.5
[2025-07-22 20:29:08] 2025-07-22 18:28:34,846 | INFO     | sum of deviations: 3891269605.000001
[2025-07-22 20:29:08] 2025-07-22 18:28:34,846 | INFO     | mean x: 1753203206.5
[2025-07-22 20:29:08] 2025-07-22 18:28:34,846 | INFO     | mean y: 2368629.8279569894
[2025-07-22 20:29:08] 2025-07-22 18:28:34,846 | INFO     | -- intersect: -3416787046.169322
[2025-07-22 20:29:08] 2025-07-22 18:28:34,846 | INFO     | intersect: -3416787046.169322
[2025-07-22 20:29:08] 2025-07-22 18:28:34,846 | INFO     | chi2: 0.00017162937309151547
[2025-07-22 20:29:08] 2025-07-22 18:28:34,846 | INFO     | current chi2=0.00017162937309151547 (change=1.1716250015754037 %)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,847 | INFO     | left removable region: 50
[2025-07-22 20:29:08] 2025-07-22 18:28:34,847 | INFO     | sum of square deviations: 1154663510.0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,848 | INFO     | sum of deviations: 2242730087.0000005
[2025-07-22 20:29:08] 2025-07-22 18:28:34,848 | INFO     | mean x: 1753203786.0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,848 | INFO     | mean y: 2369966.7741935486
[2025-07-22 20:29:08] 2025-07-22 18:28:34,848 | INFO     | -- intersect: -3402918972.7753987
[2025-07-22 20:29:08] 2025-07-22 18:28:34,848 | INFO     | intersect: -3402918972.7753987
[2025-07-22 20:29:08] 2025-07-22 18:28:34,848 | INFO     | chi2: 0.00015873696281991465
[2025-07-22 20:29:08] 2025-07-22 18:28:34,848 | INFO     | -- intersect: -3402918972.7753987
[2025-07-22 20:29:08] 2025-07-22 18:28:34,848 | INFO     | current memory leak: 1.94 B/s (using 155 data points, chi2=0.00)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,849 | INFO     | could have reported an average CPU frequency of 2689 MHz (11 samples)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,849 | INFO     | ..............................
[2025-07-22 20:29:08] 2025-07-22 18:28:34,849 | INFO     | . Timing measurements:
[2025-07-22 20:29:08] 2025-07-22 18:28:34,849 | INFO     | . get job = 0 s
[2025-07-22 20:29:08] 2025-07-22 18:28:34,849 | INFO     | . initial setup = 1 s
[2025-07-22 20:29:08] 2025-07-22 18:28:34,849 | INFO     | . payload setup = 6 s
[2025-07-22 20:29:08] 2025-07-22 18:28:34,850 | INFO     | . stage-in = 0 s
[2025-07-22 20:29:08] 2025-07-22 18:28:34,850 | INFO     | . payload execution = 12867 s
[2025-07-22 20:29:08] 2025-07-22 18:28:34,850 | INFO     | . stage-out = 1 s
[2025-07-22 20:29:08] 2025-07-22 18:28:34,850 | INFO     | . log creation = 0 s
[2025-07-22 20:29:08] 2025-07-22 18:28:34,850 | INFO     | ..............................
[2025-07-22 20:29:08] 2025-07-22 18:28:34,948 | INFO     | 
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | job summary report
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | --------------------------------------------------
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | PanDA job id: 6741685602
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | task id: 45697523
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | errors: (none)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | pilot state: finished 
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | transexitcode: 0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | exeerrorcode: 0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | exeerrordiag: 
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | exitcode: 0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | exitmsg: OK
[2025-07-22 20:29:08] 2025-07-22 18:28:34,949 | INFO     | cpuconsumptiontime: 49859 s
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | nevents: 400
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | neventsw: 0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | pid: 3332585
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | pgrp: 3332585
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | corecount: 4
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | event service: False
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | sizes: {0: 2397335, 1: 2397590, 5: 2397852, 12: 2397908, 12877: 2428053, 12880: 2437073, 12881: 2437257, 12886: 2437451}
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | --------------------------------------------------
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | 
[2025-07-22 20:29:08] 2025-07-22 18:28:34,950 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-07-22 20:29:08] 2025-07-22 18:28:34,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,969 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,969 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 20:29:08] 2025-07-22 18:28:34,971 | INFO     | job 6741685602 has completed (purged errors)
[2025-07-22 20:29:08] 2025-07-22 18:28:34,971 | INFO     | overall cleanup function is called
[2025-07-22 20:29:08] 2025-07-22 18:28:35,517 | INFO     | PID=3325564 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-22 20:29:08] 2025-07-22 18:28:35,518 | INFO     | .. there are 9 such processes running
[2025-07-22 20:29:08] 2025-07-22 18:28:35,979 | INFO     | --- collectZombieJob: --- 10, [3332585]
[2025-07-22 20:29:08] 2025-07-22 18:28:35,979 | INFO     | zombie collector waiting for pid 3332585
[2025-07-22 20:29:08] 2025-07-22 18:28:35,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 20:29:08] 2025-07-22 18:28:35,979 | INFO     | collected zombie processes
[2025-07-22 20:29:08] 2025-07-22 18:28:35,979 | INFO     | will attempt to kill all subprocesses of pid=3332585
[2025-07-22 20:29:08] 2025-07-22 18:28:36,273 | INFO     | process IDs to be killed: [3332585] (in reverse order)
[2025-07-22 20:29:08] 2025-07-22 18:28:36,371 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 20:29:08] 2025-07-22 18:28:36,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 20:29:08] 2025-07-22 18:28:36,381 | INFO     | did not find any defunct processes belonging to 3332585
[2025-07-22 20:29:08] 2025-07-22 18:28:36,390 | INFO     | did not find any defunct processes belonging to 3332585
[2025-07-22 20:29:08] 2025-07-22 18:28:36,390 | INFO     | ready for new job
[2025-07-22 20:29:08] 2025-07-22 18:28:36,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 20:29:08] 2025-07-22 18:28:36,393 | INFO     | ***************************************
[2025-07-22 20:29:08] 2025-07-22 18:28:36,393 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 20:29:08] 2025-07-22 18:28:36,393 | INFO     | ***************************************
[2025-07-22 20:29:08] 2025-07-22 18:28:36,393 | INFO     | 
[2025-07-22 20:29:08] 2025-07-22 18:28:36,397 | INFO     | architecture information:
[2025-07-22 20:29:08] 2025-07-22 18:28:36,397 | INFO     | executing command: cat /etc/os-release
[2025-07-22 20:29:08] 2025-07-22 18:28:36,411 | INFO     | cat /etc/os-release:
[2025-07-22 20:29:08] NAME="CentOS Linux"
[2025-07-22 20:29:08] VERSION="7 (Core)"
[2025-07-22 20:29:08] ID="centos"
[2025-07-22 20:29:08] ID_LIKE="rhel fedora"
[2025-07-22 20:29:08] VERSION_ID="7"
[2025-07-22 20:29:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 20:29:08] ANSI_COLOR="0;31"
[2025-07-22 20:29:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 20:29:08] HOME_URL="https://www.centos.org/"
[2025-07-22 20:29:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 20:29:08] 
[2025-07-22 20:29:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 20:29:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 20:29:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 20:29:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 20:29:08] 
[2025-07-22 20:29:08] 2025-07-22 18:28:36,412 | INFO     | ***************************************
[2025-07-22 20:29:08] 2025-07-22 18:28:36,914 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-07-22 20:29:08] 2025-07-22 18:28:36,931 | INFO     | sufficient remaining disk space (635525136384 B)
[2025-07-22 20:29:08] 2025-07-22 18:28:36,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 20:29:08] 2025-07-22 18:28:36,931 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 20:29:08] 2025-07-22 18:28:36,932 | INFO     | update_server=False
[2025-07-22 20:29:08] 2025-07-22 18:28:36,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 20:29:08] 2025-07-22 18:28:36,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 20:29:08] 2025-07-22 18:28:36,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 20:29:08] 2025-07-22 18:28:37,105 | INFO     | all payload control threads have been joined
[2025-07-22 20:29:08] 2025-07-22 18:28:37,124 | INFO     | all data control threads have been joined
[2025-07-22 20:29:08] 2025-07-22 18:28:37,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 20:29:08] 2025-07-22 18:28:37,239 | INFO     | aborting loop
[2025-07-22 20:29:08] 2025-07-22 18:28:37,625 | INFO     | all job control threads have been joined
[2025-07-22 20:29:08] 2025-07-22 18:28:37,937 | INFO     | [job] retrieve thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:37,938 | INFO     | [job] queue monitor thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,110 | INFO     | [payload] control thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,129 | INFO     | [data] control thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,240 | INFO     | [job] job monitor thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,444 | INFO     | [job] validate thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,574 | INFO     | [data] copytool_in thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,602 | INFO     | [payload] validate_post thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,630 | INFO     | [job] control thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,630 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,827 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:38,938 | INFO     | [data] copytool_out thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:39,087 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:39,511 | INFO     | [payload] failed_post thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:40,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 20:29:08] 2025-07-22 18:28:44,335 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:47,700 | INFO     | job.realtimelogging is not enabled
[2025-07-22 20:29:08] 2025-07-22 18:28:48,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 20:29:08] 2025-07-22 18:28:50,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22660440893248)>', '<ExcThread(monitor, started 22660205475584)>']
[2025-07-22 20:29:08] 2025-07-22 18:28:55,629 | INFO     | all workflow threads have been joined
[2025-07-22 20:29:08] 2025-07-22 18:28:55,629 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 20:29:08] 2025-07-22 18:28:55,629 | INFO     | traces error code: 0
[2025-07-22 20:29:08] 2025-07-22 18:28:55,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 20:29:08] 2025-07-22 18:29:07,960 | INFO     | PID=3325564 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-22 20:29:08] 2025-07-22 18:29:07,961 | INFO     | .. there are 9 such processes running
[2025-07-22 20:29:08] 2025-07-22 18:29:07,961 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 20:29:08] 2025-07-22 18:29:07,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 20:29:08] 2025-07-22 18:29:07,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 20:29:08] 2025-07-22 18:29:07,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 20:29:08] 2025-07-22 18:29:07,962 | INFO     | [monitor] control thread has ended
[2025-07-22 20:29:08] 2025-07-22 18:29:08,086 [wrapper] ==== pilot stdout END ====
[2025-07-22 20:29:08] 2025-07-22 18:29:08,088 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 20:29:08] 2025-07-22 18:29:08,091 [wrapper] pilotpid: 3325564
[2025-07-22 20:29:08] 2025-07-22 18:29:08,093 [wrapper] Pilot exit status: 0
[2025-07-22 20:29:08] 2025-07-22 18:29:08,102 [wrapper] pandaids: 6741685602 6741685602
[2025-07-22 20:29:08] 2025-07-22 18:29:08,162 [wrapper] cleanup supervisor_pilot 3812133 3325565
[2025-07-22 20:29:08] 2025-07-22 18:29:08,165 [wrapper] Test setup, not cleaning
[2025-07-22 20:29:08] 2025-07-22 18:29:08,168 [wrapper] apfmon messages muted
[2025-07-22 20:29:08] 2025-07-22 18:29:08,170 [wrapper] ==== wrapper stdout END ====
[2025-07-22 20:29:08] 2025-07-22 18:29:08,172 [wrapper] ==== wrapper stderr END ====
[2025-07-22 20:29:08]  *** Error codes and diagnostics ***
[2025-07-22 20:29:08]     "exeErrorCode": 0,
[2025-07-22 20:29:08]     "exeErrorDiag": "",
[2025-07-22 20:29:08]     "pilotErrorCode": 0,
[2025-07-22 20:29:08]     "pilotErrorDiag": "",
[2025-07-22 20:29:08]  *** Listing of results directory ***
[2025-07-22 20:29:08] total 873868
[2025-07-22 20:29:08] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc    530466 Jul 21 22:13 pilot3.tar.gz
[2025-07-22 20:29:08] -rwx------ 1 boinc boinc     36292 Jul 21 22:38 runpilot2-wrapper.sh
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc      5112 Jul 21 22:39 queuedata.json
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc       100 Jul 22 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 20:29:08] -rwxr-xr-x 1 boinc boinc      7986 Jul 22 14:56 run_atlas
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc       105 Jul 22 14:56 job.xml
[2025-07-22 20:29:08] -rw-r--r-- 3 boinc boinc 315767715 Jul 22 14:56 EVNT.45697521._000049.pool.root.1
[2025-07-22 20:29:08] -rw-r--r-- 3 boinc boinc 315767715 Jul 22 14:56 ATLAS.root_0
[2025-07-22 20:29:08] -rw-r--r-- 2 boinc boinc     15095 Jul 22 14:56 start_atlas.sh
[2025-07-22 20:29:08] drwxrwx--x 2 boinc boinc      4096 Jul 22 14:56 shared
[2025-07-22 20:29:08] -rw-r--r-- 2 boinc boinc    542901 Jul 22 14:56 input.tar.gz
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc         0 Jul 22 14:56 boinc_lockfile
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc      6642 Jul 22 16:53 init_data.xml
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc      2634 Jul 22 16:53 pandaJob.out
[2025-07-22 20:29:08] -rw------- 1 boinc boinc    977712 Jul 22 16:53 agis_schedconf.cvmfs.json
[2025-07-22 20:29:08] -rw------- 1 boinc boinc 256292431 Jul 22 20:27 HITS.45697523._001225.pool.root.1
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc       530 Jul 22 20:28 boinc_task_state.xml
[2025-07-22 20:29:08] -rw------- 1 boinc boinc      1036 Jul 22 20:28 memory_monitor_summary.json
[2025-07-22 20:29:08] -rw------- 1 boinc boinc   1593031 Jul 22 20:28 agis_ddmendpoints.agis.ALL.json
[2025-07-22 20:29:08] -rw------- 1 boinc boinc    344248 Jul 22 20:28 log.45697523._001225.job.log.tgz.1
[2025-07-22 20:29:08] -rw------- 1 boinc boinc      7825 Jul 22 20:28 heartbeat.json
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc      8192 Jul 22 20:28 boinc_mmap_file
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc        27 Jul 22 20:28 wrapper_checkpoint.txt
[2025-07-22 20:29:08] -rw------- 1 boinc boinc       822 Jul 22 20:29 pilotlog.txt
[2025-07-22 20:29:08] -rw------- 1 boinc boinc        97 Jul 22 20:29 pilot_heartbeat.json
[2025-07-22 20:29:08] -rw------- 1 boinc boinc   1219867 Jul 22 20:29 log.45697523._001225.job.log.1
[2025-07-22 20:29:08] -rw------- 1 boinc boinc       357 Jul 22 20:29 output.list
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc       620 Jul 22 20:29 runtime_log
[2025-07-22 20:29:08] -rw------- 1 boinc boinc   1587200 Jul 22 20:29 result.tar.gz
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc      9104 Jul 22 20:29 runtime_log.err
[2025-07-22 20:29:08] -rw------- 1 boinc boinc       789 Jul 22 20:29 VN3MDmsSCy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdBGLDmTJWn2m.diag
[2025-07-22 20:29:08] -rw-r--r-- 1 boinc boinc     22809 Jul 22 20:29 stderr.txt
[2025-07-22 20:29:08] HITS file was successfully produced:
[2025-07-22 20:29:08] -rw------- 1 boinc boinc 256292431 Jul 22 20:27 shared/HITS.pool.root.1
[2025-07-22 20:29:08]  *** Contents of shared directory: ***
[2025-07-22 20:29:08] total 560764
[2025-07-22 20:29:08] -rw-r--r-- 3 boinc boinc 315767715 Jul 22 14:56 ATLAS.root_0
[2025-07-22 20:29:08] -rw-r--r-- 2 boinc boinc     15095 Jul 22 14:56 start_atlas.sh
[2025-07-22 20:29:08] -rw-r--r-- 2 boinc boinc    542901 Jul 22 14:56 input.tar.gz
[2025-07-22 20:29:08] -rw------- 1 boinc boinc 256292431 Jul 22 20:27 HITS.pool.root.1
[2025-07-22 20:29:08] -rw------- 1 boinc boinc   1587200 Jul 22 20:29 result.tar.gz
20:29:09 (3321839): run_atlas exited; CPU time 50333.142252
20:29:09 (3321839): called boinc_finish(0)

</stderr_txt>
]]>

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