Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:17:37 (533553): wrapper (7.7.26015): starting
20:17:37 (533553): wrapper: running run_atlas (--nthreads 12)
[2025-07-21 20:17:37] Arguments: --nthreads 12
[2025-07-21 20:17:37] Threads: 12
[2025-07-21 20:17:37] Checking for CVMFS
[2025-07-21 20:17:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 20:17:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 20:17:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 20:17:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 20:17:38] 2.12.6.0 1267368 10430 321880 148602 1 147 26602099 32935937 15323 16776704 0 17456937 99.605 41837357 29448 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-21 20:17:38] CVMFS is ok
[2025-07-21 20:17:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 20:17:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 20:17:38] Further information can be found at the LHC@home message board.
[2025-07-21 20:17:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 20:17:38] Checking for apptainer binary...
[2025-07-21 20:17:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 20:17:38] Running /usr/bin/apptainer --version
[2025-07-21 20:17:38] apptainer version 1.4.1-1.el9
[2025-07-21 20:17:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 20:17:39] c6-2-29-3.aglt2.org
[2025-07-21 20:17:39] apptainer works
[2025-07-21 20:17:39] Set ATHENA_PROC_NUMBER=12
[2025-07-21 20:17:39] Set ATHENA_CORE_NUMBER=12
[2025-07-21 20:17:39] Starting ATLAS job with PandaID=6741675057
[2025-07-21 20:17:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-22 00:27:50]  *** The last 200 lines of the pilot log: ***
[2025-07-22 00:27:50] 2025-07-22 04:27:11,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 00:27:50] 2025-07-22 04:27:13,992 | INFO     | monitor loop #863: job 0:6741675057 is in state 'finished'
[2025-07-22 00:27:50] 2025-07-22 04:27:13,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-22 00:27:50] 2025-07-22 04:27:15,910 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-22 00:27:50] 2025-07-22 04:27:15,914 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3025.2969999999996
[2025-07-22 00:27:50] 2025-07-22 04:27:15,935 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741675057/memory_monitor_summary.json (trf name=prmon)
[2025-07-22 00:27:50] 2025-07-22 04:27:15,938 | INFO     | extracted standard info from prmon json
[2025-07-22 00:27:50] 2025-07-22 04:27:15,938 | INFO     | extracted standard memory fields from prmon json
[2025-07-22 00:27:50] 2025-07-22 04:27:15,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-22 00:27:50] 2025-07-22 04:27:15,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-22 00:27:50] 2025-07-22 04:27:15,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-22 00:27:50] 2025-07-22 04:27:15,955 | INFO     | fitting pss+swap vs Time
[2025-07-22 00:27:50] 2025-07-22 04:27:15,956 | INFO     | sum of square deviations: 4449043389.884801
[2025-07-22 00:27:50] 2025-07-22 04:27:15,957 | INFO     | sum of deviations: -32115222487.71192
[2025-07-22 00:27:50] 2025-07-22 04:27:15,957 | INFO     | mean x: 1753151008.5596707
[2025-07-22 00:27:50] 2025-07-22 04:27:15,957 | INFO     | mean y: 2459211.6008230452
[2025-07-22 00:27:50] 2025-07-22 04:27:15,957 | INFO     | -- intersect: 12657502051.250048
[2025-07-22 00:27:50] 2025-07-22 04:27:15,957 | INFO     | intersect: 12657502051.250048
[2025-07-22 00:27:50] 2025-07-22 04:27:15,958 | INFO     | chi2: 3.767552362454111
[2025-07-22 00:27:50] 2025-07-22 04:27:15,962 | INFO     | sum of square deviations: 4180032564.9243712
[2025-07-22 00:27:50] 2025-07-22 04:27:15,964 | INFO     | sum of deviations: -14713391895.596624
[2025-07-22 00:27:50] 2025-07-22 04:27:15,964 | INFO     | mean x: 1753150856.067227
[2025-07-22 00:27:50] 2025-07-22 04:27:15,964 | INFO     | mean y: 2468936.974789916
[2025-07-22 00:27:50] 2025-07-22 04:27:15,964 | INFO     | -- intersect: 6173424592.647898
[2025-07-22 00:27:50] 2025-07-22 04:27:15,964 | INFO     | intersect: 6173424592.647898
[2025-07-22 00:27:50] 2025-07-22 04:27:15,964 | INFO     | chi2: 3.108573516241272
[2025-07-22 00:27:50] 2025-07-22 04:27:15,965 | INFO     | current chi2=3.108573516241272 (change=17.49090079755634 %)
[2025-07-22 00:27:50] 2025-07-22 04:27:15,965 | INFO     | right removable region: 237
[2025-07-22 00:27:50] 2025-07-22 04:27:15,965 | INFO     | sum of square deviations: 4179964305.7857094
[2025-07-22 00:27:50] 2025-07-22 04:27:15,973 | INFO     | sum of deviations: -89084031245.64285
[2025-07-22 00:27:50] 2025-07-22 04:27:15,974 | INFO     | mean x: 1753151161.0714285
[2025-07-22 00:27:50] 2025-07-22 04:27:15,974 | INFO     | mean y: 2491368.0966386553
[2025-07-22 00:27:50] 2025-07-22 04:27:15,974 | INFO     | -- intersect: 37365913968.39212
[2025-07-22 00:27:50] 2025-07-22 04:27:15,974 | INFO     | intersect: 37365913968.39212
[2025-07-22 00:27:50] 2025-07-22 04:27:15,974 | INFO     | chi2: 1.3360624080929475
[2025-07-22 00:27:50] 2025-07-22 04:27:15,974 | INFO     | current chi2=1.3360624080929475 (change=64.53765523187946 %)
[2025-07-22 00:27:50] 2025-07-22 04:27:15,975 | INFO     | sum of square deviations: 3921983866.9356446
[2025-07-22 00:27:50] 2025-07-22 04:27:15,976 | INFO     | sum of deviations: -97719886906.4893
[2025-07-22 00:27:50] 2025-07-22 04:27:15,976 | INFO     | mean x: 1753151313.5751073
[2025-07-22 00:27:50] 2025-07-22 04:27:15,976 | INFO     | mean y: 2496386.5708154505
[2025-07-22 00:27:50] 2025-07-22 04:27:15,976 | INFO     | -- intersect: 43683896898.39342
[2025-07-22 00:27:50] 2025-07-22 04:27:15,976 | INFO     | intersect: 43683896898.39342
[2025-07-22 00:27:50] 2025-07-22 04:27:15,977 | INFO     | chi2: 1.1402454103422497
[2025-07-22 00:27:50] 2025-07-22 04:27:15,977 | INFO     | current chi2=1.1402454103422497 (change=14.656276276061138 %)
[2025-07-22 00:27:50] 2025-07-22 04:27:15,977 | INFO     | left removable region: 20
[2025-07-22 00:27:50] 2025-07-22 04:27:15,977 | INFO     | sum of square deviations: 3168190512.4977098
[2025-07-22 00:27:50] 2025-07-22 04:27:15,982 | INFO     | sum of deviations: -64957943686.19354
[2025-07-22 00:27:50] 2025-07-22 04:27:15,982 | INFO     | mean x: 1753151435.5898619
[2025-07-22 00:27:50] 2025-07-22 04:27:15,982 | INFO     | mean y: 2497834.5483870967
[2025-07-22 00:27:50] 2025-07-22 04:27:15,982 | INFO     | -- intersect: 35947656996.279175
[2025-07-22 00:27:50] 2025-07-22 04:27:15,982 | INFO     | intersect: 35947656996.279175
[2025-07-22 00:27:50] 2025-07-22 04:27:15,983 | INFO     | chi2: 0.4387361409908612
[2025-07-22 00:27:50] 2025-07-22 04:27:15,983 | INFO     | -- intersect: 35947656996.279175
[2025-07-22 00:27:50] 2025-07-22 04:27:15,983 | INFO     | current memory leak: -20.50 B/s (using 217 data points, chi2=0.44)
[2025-07-22 00:27:50] 2025-07-22 04:27:15,983 | INFO     | could have reported an average CPU frequency of 2906 MHz (12 samples)
[2025-07-22 00:27:50] 2025-07-22 04:27:15,983 | INFO     | ..............................
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | . Timing measurements:
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | . get job = 0 s
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | . initial setup = 5 s
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | . payload setup = 38 s
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | . stage-in = 0 s
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | . payload execution = 14796 s
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | . stage-out = 3 s
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | . log creation = 0 s
[2025-07-22 00:27:50] 2025-07-22 04:27:15,984 | INFO     | ..............................
[2025-07-22 00:27:50] 2025-07-22 04:27:16,374 | INFO     | 
[2025-07-22 00:27:50] 2025-07-22 04:27:16,374 | INFO     | job summary report
[2025-07-22 00:27:50] 2025-07-22 04:27:16,374 | INFO     | --------------------------------------------------
[2025-07-22 00:27:50] 2025-07-22 04:27:16,374 | INFO     | PanDA job id: 6741675057
[2025-07-22 00:27:50] 2025-07-22 04:27:16,374 | INFO     | task id: 45697523
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | errors: (none)
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | pilot state: finished 
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | transexitcode: 0
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | exeerrorcode: 0
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | exeerrordiag: 
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | exitcode: 0
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | exitmsg: OK
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | cpuconsumptiontime: 56745 s
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | nevents: 400
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | neventsw: 0
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | pid: 547319
[2025-07-22 00:27:50] 2025-07-22 04:27:16,375 | INFO     | pgrp: 547319
[2025-07-22 00:27:50] 2025-07-22 04:27:16,376 | INFO     | corecount: 12
[2025-07-22 00:27:50] 2025-07-22 04:27:16,376 | INFO     | event service: False
[2025-07-22 00:27:50] 2025-07-22 04:27:16,376 | INFO     | sizes: {0: 2397330, 1: 2397414, 2: 2397585, 3: 2397613, 13: 2397641, 24: 2397697, 25: 2398115, 35: 2398143, 14838: 2428852, 14839: 2428851, 14842: 2437905, 14844: 
[2025-07-22 00:27:50] 2025-07-22 04:27:16,376 | INFO     | --------------------------------------------------
[2025-07-22 00:27:50] 2025-07-22 04:27:16,376 | INFO     | 
[2025-07-22 00:27:50] 2025-07-22 04:27:16,376 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-22 00:27:50] 2025-07-22 04:27:16,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-22 00:27:50] 2025-07-22 04:27:16,630 | INFO     | job 6741675057 has completed (purged errors)
[2025-07-22 00:27:50] 2025-07-22 04:27:16,631 | INFO     | overall cleanup function is called
[2025-07-22 00:27:50] 2025-07-22 04:27:17,648 | INFO     | --- collectZombieJob: --- 10, [547319]
[2025-07-22 00:27:50] 2025-07-22 04:27:17,648 | INFO     | zombie collector waiting for pid 547319
[2025-07-22 00:27:50] 2025-07-22 04:27:17,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-22 00:27:50] 2025-07-22 04:27:17,649 | INFO     | collected zombie processes
[2025-07-22 00:27:50] 2025-07-22 04:27:17,649 | INFO     | will attempt to kill all subprocesses of pid=547319
[2025-07-22 00:27:50] 2025-07-22 04:27:18,098 | INFO     | process IDs to be killed: [547319] (in reverse order)
[2025-07-22 00:27:50] 2025-07-22 04:27:18,420 | WARNING  | found no corresponding commands to process id(s)
[2025-07-22 00:27:50] 2025-07-22 04:27:18,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-22 00:27:50] 2025-07-22 04:27:18,453 | INFO     | did not find any defunct processes belonging to 547319
[2025-07-22 00:27:50] 2025-07-22 04:27:18,490 | INFO     | did not find any defunct processes belonging to 547319
[2025-07-22 00:27:50] 2025-07-22 04:27:18,490 | INFO     | ready for new job
[2025-07-22 00:27:50] 2025-07-22 04:27:18,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-22 00:27:50] 2025-07-22 04:27:18,492 | INFO     | ***************************************
[2025-07-22 00:27:50] 2025-07-22 04:27:18,493 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-22 00:27:50] 2025-07-22 04:27:18,493 | INFO     | ***************************************
[2025-07-22 00:27:50] 2025-07-22 04:27:18,493 | INFO     | 
[2025-07-22 00:27:50] 2025-07-22 04:27:18,517 | INFO     | architecture information:
[2025-07-22 00:27:50] 2025-07-22 04:27:18,527 | INFO     | executing command: cat /etc/os-release
[2025-07-22 00:27:50] 2025-07-22 04:27:18,564 | INFO     | cat /etc/os-release:
[2025-07-22 00:27:50] NAME="CentOS Linux"
[2025-07-22 00:27:50] VERSION="7 (Core)"
[2025-07-22 00:27:50] ID="centos"
[2025-07-22 00:27:50] ID_LIKE="rhel fedora"
[2025-07-22 00:27:50] VERSION_ID="7"
[2025-07-22 00:27:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-22 00:27:50] ANSI_COLOR="0;31"
[2025-07-22 00:27:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-22 00:27:50] HOME_URL="https://www.centos.org/"
[2025-07-22 00:27:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-22 00:27:50] 
[2025-07-22 00:27:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-22 00:27:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-22 00:27:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-22 00:27:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-22 00:27:50] 
[2025-07-22 00:27:50] 2025-07-22 04:27:18,565 | INFO     | ***************************************
[2025-07-22 00:27:50] 2025-07-22 04:27:19,068 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-22 00:27:50] 2025-07-22 04:27:19,164 | INFO     | sufficient remaining disk space (75952553984 B)
[2025-07-22 00:27:50] 2025-07-22 04:27:19,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-22 00:27:50] 2025-07-22 04:27:19,165 | INFO     | current server update state: UPDATING_FINAL
[2025-07-22 00:27:50] 2025-07-22 04:27:19,165 | INFO     | update_server=False
[2025-07-22 00:27:50] 2025-07-22 04:27:19,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-22 00:27:50] 2025-07-22 04:27:19,385 | INFO     | all data control threads have been joined
[2025-07-22 00:27:50] 2025-07-22 04:27:19,552 | INFO     | all payload control threads have been joined
[2025-07-22 00:27:50] 2025-07-22 04:27:20,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-22 00:27:50] 2025-07-22 04:27:20,016 | INFO     | aborting loop
[2025-07-22 00:27:50] 2025-07-22 04:27:20,120 | INFO     | all job control threads have been joined
[2025-07-22 00:27:50] 2025-07-22 04:27:20,171 | INFO     | [job] retrieve thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:20,366 | INFO     | [payload] execute_payloads thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:20,391 | INFO     | [data] control thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:20,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-22 00:27:50] 2025-07-22 04:27:20,558 | INFO     | [payload] control thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:20,934 | INFO     | [payload] failed_post thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:21,022 | INFO     | [job] job monitor thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:21,126 | INFO     | [job] control thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:21,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-22 00:27:50] 2025-07-22 04:27:21,399 | INFO     | [payload] validate_pre thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:21,416 | INFO     | [data] copytool_in thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:21,480 | INFO     | [job] validate thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:21,516 | INFO     | [job] create_data_payload thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:21,676 | INFO     | [payload] validate_post thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:22,216 | INFO     | [job] queue monitor thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:22,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-22 00:27:50] 2025-07-22 04:27:22,457 | INFO     | [data] copytool_out thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:26,360 | INFO     | [data] queue_monitor thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:29,475 | INFO     | job.realtimelogging is not enabled
[2025-07-22 00:27:50] 2025-07-22 04:27:30,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-22 00:27:50] 2025-07-22 04:27:31,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075545204544)>', '<ExcThread(monitor, started 140074880575232)>']
[2025-07-22 00:27:50] 2025-07-22 04:27:36,637 | INFO     | all workflow threads have been joined
[2025-07-22 00:27:50] 2025-07-22 04:27:36,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-22 00:27:50] 2025-07-22 04:27:36,638 | INFO     | traces error code: 0
[2025-07-22 00:27:50] 2025-07-22 04:27:36,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-22 00:27:50] 2025-07-22 04:27:49,137 | INFO     | PID=538280 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-22 00:27:50] 2025-07-22 04:27:49,138 | INFO     | .. there are 25 such processes running
[2025-07-22 00:27:50] 2025-07-22 04:27:49,138 | INFO     | found 0 job(s) in 20 queues
[2025-07-22 00:27:50] 2025-07-22 04:27:49,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-22 00:27:50] 2025-07-22 04:27:49,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-22 00:27:50] 2025-07-22 04:27:49,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-22 00:27:50] 2025-07-22 04:27:49,138 | INFO     | [monitor] control thread has ended
[2025-07-22 00:27:50] 2025-07-22 04:27:49,362 [wrapper] ==== pilot stdout END ====
[2025-07-22 00:27:50] 2025-07-22 04:27:49,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-22 00:27:50] 2025-07-22 04:27:49,415 [wrapper] pilotpid: 538280
[2025-07-22 00:27:50] 2025-07-22 04:27:49,427 [wrapper] Pilot exit status: 0
[2025-07-22 00:27:50] 2025-07-22 04:27:49,614 [wrapper] pandaids: 6741675057
[2025-07-22 00:27:50] 2025-07-22 04:27:49,850 [wrapper] cleanup supervisor_pilot 1352457 538281
[2025-07-22 00:27:50] 2025-07-22 04:27:49,890 [wrapper] Test setup, not cleaning
[2025-07-22 00:27:50] 2025-07-22 04:27:49,920 [wrapper] apfmon messages muted
[2025-07-22 00:27:50] 2025-07-22 04:27:49,930 [wrapper] ==== wrapper stdout END ====
[2025-07-22 00:27:50] 2025-07-22 04:27:49,964 [wrapper] ==== wrapper stderr END ====
[2025-07-22 00:27:50]  *** Error codes and diagnostics ***
[2025-07-22 00:27:50]     "exeErrorCode": 0,
[2025-07-22 00:27:50]     "exeErrorDiag": "",
[2025-07-22 00:27:50]     "pilotErrorCode": 0,
[2025-07-22 00:27:50]     "pilotErrorDiag": "",
[2025-07-22 00:27:50]  *** Listing of results directory ***
[2025-07-22 00:27:50] total 568536
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 16:13 pilot3.tar.gz
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 16:16 queuedata.json
[2025-07-22 00:27:50] -rwx------. 1 boincer umatlas     36292 Jul 21 16:17 runpilot2-wrapper.sh
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas       100 Jul 21 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-22 00:27:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 21 20:17 run_atlas
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas       105 Jul 21 20:17 job.xml
[2025-07-22 00:27:50] -rw-r--r--. 2 boincer umatlas 315832704 Jul 21 20:17 EVNT.45697521._000008.pool.root.1
[2025-07-22 00:27:50] -rw-r--r--. 2 boincer umatlas    542899 Jul 21 20:17 input.tar.gz
[2025-07-22 00:27:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 20:17 start_atlas.sh
[2025-07-22 00:27:50] drwxrwx--x. 2 boincer umatlas      4096 Jul 21 20:17 shared
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas         0 Jul 21 20:17 boinc_lockfile
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas      2631 Jul 21 20:17 pandaJob.out
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas    977326 Jul 21 20:18 agis_schedconf.cvmfs.json
[2025-07-22 00:27:50] drwx------. 4 boincer umatlas      4096 Jul 21 20:18 pilot3
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas      6842 Jul 22 00:21 init_data.xml
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas 259257795 Jul 22 00:25 HITS.45697523._000180.pool.root.1
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas       530 Jul 22 00:25 boinc_task_state.xml
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas      1042 Jul 22 00:26 memory_monitor_summary.json
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas   1593055 Jul 22 00:26 agis_ddmendpoints.agis.ALL.json
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas    445370 Jul 22 00:26 log.45697523._000180.job.log.tgz.1
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas        95 Jul 22 00:27 pilot_heartbeat.json
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas      7820 Jul 22 00:27 heartbeat.json
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas        28 Jul 22 00:27 wrapper_checkpoint.txt
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas      8192 Jul 22 00:27 boinc_mmap_file
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas       822 Jul 22 00:27 pilotlog.txt
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas   1164819 Jul 22 00:27 log.45697523._000180.job.log.1
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas       357 Jul 22 00:27 output.list
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas       620 Jul 22 00:27 runtime_log
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas   1628160 Jul 22 00:27 result.tar.gz
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas       658 Jul 22 00:27 SgKMDmo7By7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmByFLDmbn8JQn.diag
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas      8668 Jul 22 00:27 runtime_log.err
[2025-07-22 00:27:50] -rw-r--r--. 1 boincer umatlas     21265 Jul 22 00:27 stderr.txt
[2025-07-22 00:27:50] HITS file was successfully produced:
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas 259257795 Jul 22 00:25 shared/HITS.pool.root.1
[2025-07-22 00:27:50]  *** Contents of shared directory: ***
[2025-07-22 00:27:50] total 563760
[2025-07-22 00:27:50] -rw-r--r--. 2 boincer umatlas 315832704 Jul 21 20:17 ATLAS.root_0
[2025-07-22 00:27:50] -rw-r--r--. 2 boincer umatlas    542899 Jul 21 20:17 input.tar.gz
[2025-07-22 00:27:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 20:17 start_atlas.sh
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas 259257795 Jul 22 00:25 HITS.pool.root.1
[2025-07-22 00:27:50] -rw-------. 1 boincer umatlas   1628160 Jul 22 00:27 result.tar.gz
00:27:52 (533553): run_atlas exited; CPU time 57136.885777
00:27:52 (533553): called boinc_finish(0)

</stderr_txt>
]]>

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