Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:18:34 (3526633): wrapper (7.7.26015): starting
09:18:34 (3526633): wrapper: running run_atlas (--nthreads 8)
[2025-07-21 09:18:34] Arguments: --nthreads 8
[2025-07-21 09:18:34] Threads: 8
[2025-07-21 09:18:34] Checking for CVMFS
[2025-07-21 09:18:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 09:18:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 09:18:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 09:18:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 09:18:35] 2.13.0.0 100689 18643 469184 148579 0 730 28936063 32935936 25892 16776704 0 118068775 99.537 174076798 22187 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-21 09:18:35] CVMFS is ok
[2025-07-21 09:18:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 09:18:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 09:18:35] Further information can be found at the LHC@home message board.
[2025-07-21 09:18:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 09:18:35] Checking for apptainer binary...
[2025-07-21 09:18:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 09:18:35] Running /usr/bin/apptainer --version
[2025-07-21 09:18:35] apptainer version 1.4.1-1.el9
[2025-07-21 09:18:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 09:18:35] c7-2-38.aglt2.org
[2025-07-21 09:18:35] apptainer works
[2025-07-21 09:18:35] Set ATHENA_PROC_NUMBER=8
[2025-07-21 09:18:35] Set ATHENA_CORE_NUMBER=8
[2025-07-21 09:18:35] Starting ATLAS job with PandaID=6741376745
[2025-07-21 09:18:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:20:07 (3526633): BOINC client no longer exists - exiting
10:20:07 (3526633): timer handler: client dead, exiting
10:28:00 (4130096): wrapper (7.7.26015): starting
10:28:00 (4130096): wrapper: running run_atlas (--nthreads 8)
[2025-07-21 10:28:00] Arguments: --nthreads 8
[2025-07-21 10:28:00] Threads: 8
[2025-07-21 10:28:00] This job has been restarted, cleaning up previous attempt
[2025-07-21 10:28:00] Checking for CVMFS
[2025-07-21 10:28:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 10:28:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 10:28:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 10:28:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 10:28:01] 2.13.0.0 100689 18713 447052 148583 3 245 17078304 32935936 25278 16776704 0 118516915 99.535 174749910 22196 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-21 10:28:01] CVMFS is ok
[2025-07-21 10:28:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 10:28:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 10:28:01] Further information can be found at the LHC@home message board.
[2025-07-21 10:28:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 10:28:01] Checking for apptainer binary...
[2025-07-21 10:28:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 10:28:01] Running /usr/bin/apptainer --version
[2025-07-21 10:28:01] apptainer version 1.4.1-1.el9
[2025-07-21 10:28:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 10:28:01] c7-2-38.aglt2.org
[2025-07-21 10:28:01] apptainer works
[2025-07-21 10:28:01] Set ATHENA_PROC_NUMBER=8
[2025-07-21 10:28:01] Set ATHENA_CORE_NUMBER=8
[2025-07-21 10:28:01] Starting ATLAS job with PandaID=6741376745
[2025-07-21 10:28:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-21 14:03:48]  *** The last 200 lines of the pilot log: ***
[2025-07-21 14:03:48] 2025-07-21 18:03:15,348 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 14:03:48] 2025-07-21 18:03:15,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 14:03:48] 2025-07-21 18:03:15,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 14:03:48] 2025-07-21 18:03:15,362 | INFO     | fitting pss+swap vs Time
[2025-07-21 14:03:48] 2025-07-21 18:03:15,363 | INFO     | sum of square deviations: 2871466953.2809577
[2025-07-21 14:03:48] 2025-07-21 18:03:15,364 | INFO     | sum of deviations: 19749038786.961895
[2025-07-21 14:03:48] 2025-07-21 18:03:15,364 | INFO     | mean x: 1753114555.5761905
[2025-07-21 14:03:48] 2025-07-21 18:03:15,364 | INFO     | mean y: 2194792.7523809522
[2025-07-21 14:03:48] 2025-07-21 18:03:15,364 | INFO     | -- intersect: -12055170978.60081
[2025-07-21 14:03:48] 2025-07-21 18:03:15,364 | INFO     | intersect: -12055170978.60081
[2025-07-21 14:03:48] 2025-07-21 18:03:15,364 | INFO     | chi2: 1.7357484585652223
[2025-07-21 14:03:48] 2025-07-21 18:03:15,365 | INFO     | sum of square deviations: 2671198310.751219
[2025-07-21 14:03:48] 2025-07-21 18:03:15,366 | INFO     | sum of deviations: 20494217360.26342
[2025-07-21 14:03:48] 2025-07-21 18:03:15,366 | INFO     | mean x: 1753114403.0780487
[2025-07-21 14:03:48] 2025-07-21 18:03:15,366 | INFO     | mean y: 2195344.8585365852
[2025-07-21 14:03:48] 2025-07-21 18:03:15,366 | INFO     | -- intersect: -13448212844.410568
[2025-07-21 14:03:48] 2025-07-21 18:03:15,366 | INFO     | intersect: -13448212844.410568
[2025-07-21 14:03:48] 2025-07-21 18:03:15,367 | INFO     | chi2: 1.7315266204428403
[2025-07-21 14:03:48] 2025-07-21 18:03:15,367 | INFO     | current chi2=1.7315266204428403 (change=0.24322868336992573 %)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,367 | INFO     | right removable region: 204
[2025-07-21 14:03:48] 2025-07-21 18:03:15,367 | INFO     | sum of square deviations: 2671188550.751219
[2025-07-21 14:03:48] 2025-07-21 18:03:15,368 | INFO     | sum of deviations: -11785633341.11221
[2025-07-21 14:03:48] 2025-07-21 18:03:15,368 | INFO     | mean x: 1753114708.0780487
[2025-07-21 14:03:48] 2025-07-21 18:03:15,369 | INFO     | mean y: 2218594.819512195
[2025-07-21 14:03:48] 2025-07-21 18:03:15,369 | INFO     | -- intersect: 7737190036.093545
[2025-07-21 14:03:48] 2025-07-21 18:03:15,369 | INFO     | intersect: 7737190036.093545
[2025-07-21 14:03:48] 2025-07-21 18:03:15,369 | INFO     | chi2: 0.1672917946771006
[2025-07-21 14:03:48] 2025-07-21 18:03:15,369 | INFO     | current chi2=0.1672917946771006 (change=90.3619793610311 %)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,369 | INFO     | sum of square deviations: 2480445210.71999
[2025-07-21 14:03:48] 2025-07-21 18:03:15,370 | INFO     | sum of deviations: -13487443128.120003
[2025-07-21 14:03:48] 2025-07-21 18:03:15,370 | INFO     | mean x: 1753114860.58
[2025-07-21 14:03:48] 2025-07-21 18:03:15,370 | INFO     | mean y: 2219899.07
[2025-07-21 14:03:48] 2025-07-21 18:03:15,370 | INFO     | -- intersect: 9534797710.886057
[2025-07-21 14:03:48] 2025-07-21 18:03:15,371 | INFO     | intersect: 9534797710.886057
[2025-07-21 14:03:48] 2025-07-21 18:03:15,371 | INFO     | chi2: 0.12060274738242993
[2025-07-21 14:03:48] 2025-07-21 18:03:15,371 | INFO     | current chi2=0.12060274738242993 (change=27.908749131891287 %)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,371 | INFO     | sum of square deviations: 2299016447.846142
[2025-07-21 14:03:48] 2025-07-21 18:03:15,372 | INFO     | sum of deviations: -11378691506.0
[2025-07-21 14:03:48] 2025-07-21 18:03:15,372 | INFO     | mean x: 1753115013.0769231
[2025-07-21 14:03:48] 2025-07-21 18:03:15,372 | INFO     | mean y: 2218113.933333333
[2025-07-21 14:03:48] 2025-07-21 18:03:15,372 | INFO     | -- intersect: 8679039424.641268
[2025-07-21 14:03:48] 2025-07-21 18:03:15,372 | INFO     | intersect: 8679039424.641268
[2025-07-21 14:03:48] 2025-07-21 18:03:15,373 | INFO     | chi2: 0.11662252655980515
[2025-07-21 14:03:48] 2025-07-21 18:03:15,373 | INFO     | current chi2=0.11662252655980515 (change=3.300273757448946 %)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,373 | INFO     | left removable region: 30
[2025-07-21 14:03:48] 2025-07-21 18:03:15,373 | INFO     | sum of square deviations: 1633414787.2931082
[2025-07-21 14:03:48] 2025-07-21 18:03:15,374 | INFO     | sum of deviations: -5176327882.241381
[2025-07-21 14:03:48] 2025-07-21 18:03:15,374 | INFO     | mean x: 1753115287.5344827
[2025-07-21 14:03:48] 2025-07-21 18:03:15,374 | INFO     | mean y: 2214492.8735632184
[2025-07-21 14:03:48] 2025-07-21 18:03:15,374 | INFO     | -- intersect: 5557875929.419594
[2025-07-21 14:03:48] 2025-07-21 18:03:15,374 | INFO     | intersect: 5557875929.419594
[2025-07-21 14:03:48] 2025-07-21 18:03:15,374 | INFO     | chi2: 0.10355565822169203
[2025-07-21 14:03:48] 2025-07-21 18:03:15,374 | INFO     | -- intersect: 5557875929.419594
[2025-07-21 14:03:48] 2025-07-21 18:03:15,374 | INFO     | current memory leak: -3.17 B/s (using 174 data points, chi2=0.10)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | could have reported an average CPU frequency of 3328 MHz (11 samples)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | ..............................
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | . Timing measurements:
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | . get job = 0 s
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | . initial setup = 2 s
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | . payload setup = 22 s
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | . stage-in = 0 s
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | . payload execution = 12808 s
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | . stage-out = 5 s
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | . log creation = 0 s
[2025-07-21 14:03:48] 2025-07-21 18:03:15,375 | INFO     | ..............................
[2025-07-21 14:03:48] 2025-07-21 18:03:15,684 | INFO     | 
[2025-07-21 14:03:48] 2025-07-21 18:03:15,684 | INFO     | job summary report
[2025-07-21 14:03:48] 2025-07-21 18:03:15,684 | INFO     | --------------------------------------------------
[2025-07-21 14:03:48] 2025-07-21 18:03:15,684 | INFO     | PanDA job id: 6741376745
[2025-07-21 14:03:48] 2025-07-21 18:03:15,684 | INFO     | task id: 45668738
[2025-07-21 14:03:48] 2025-07-21 18:03:15,684 | INFO     | errors: (none)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-21 14:03:48] 2025-07-21 18:03:15,684 | INFO     | pilot state: finished 
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | transexitcode: 0
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | exeerrorcode: 0
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | exeerrordiag: 
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | exitcode: 0
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | exitmsg: OK
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | cpuconsumptiontime: 44380 s
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | nevents: 400
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | neventsw: 0
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | pid: 4158915
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | pgrp: 4158915
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | corecount: 8
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | event service: False
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | sizes: {0: 2397406, 11: 2397406, 13: 2397696, 22: 2397752, 12834: 2427928, 12835: 2427927, 12841: 2437109, 12842: 2437165, 12851: 2437359}
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | --------------------------------------------------
[2025-07-21 14:03:48] 2025-07-21 18:03:15,685 | INFO     | 
[2025-07-21 14:03:48] 2025-07-21 18:03:15,686 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-21 14:03:48] 2025-07-21 18:03:15,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-21 14:03:48] 2025-07-21 18:03:15,733 | INFO     | job 6741376745 has completed (purged errors)
[2025-07-21 14:03:48] 2025-07-21 18:03:15,733 | INFO     | overall cleanup function is called
[2025-07-21 14:03:48] 2025-07-21 18:03:16,746 | INFO     | --- collectZombieJob: --- 10, [4158915]
[2025-07-21 14:03:48] 2025-07-21 18:03:16,747 | INFO     | zombie collector waiting for pid 4158915
[2025-07-21 14:03:48] 2025-07-21 18:03:16,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-21 14:03:48] 2025-07-21 18:03:16,747 | INFO     | collected zombie processes
[2025-07-21 14:03:48] 2025-07-21 18:03:16,747 | INFO     | will attempt to kill all subprocesses of pid=4158915
[2025-07-21 14:03:48] 2025-07-21 18:03:17,646 | INFO     | process IDs to be killed: [4158915] (in reverse order)
[2025-07-21 14:03:48] 2025-07-21 18:03:17,904 | WARNING  | found no corresponding commands to process id(s)
[2025-07-21 14:03:48] 2025-07-21 18:03:17,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-21 14:03:48] 2025-07-21 18:03:17,939 | INFO     | did not find any defunct processes belonging to 4158915
[2025-07-21 14:03:48] 2025-07-21 18:03:17,973 | INFO     | did not find any defunct processes belonging to 4158915
[2025-07-21 14:03:48] 2025-07-21 18:03:17,974 | INFO     | ready for new job
[2025-07-21 14:03:48] 2025-07-21 18:03:17,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-21 14:03:48] 2025-07-21 18:03:17,976 | INFO     | ***************************************
[2025-07-21 14:03:48] 2025-07-21 18:03:17,976 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-21 14:03:48] 2025-07-21 18:03:17,976 | INFO     | ***************************************
[2025-07-21 14:03:48] 2025-07-21 18:03:17,977 | INFO     | 
[2025-07-21 14:03:48] 2025-07-21 18:03:17,995 | INFO     | architecture information:
[2025-07-21 14:03:48] 2025-07-21 18:03:17,995 | INFO     | executing command: cat /etc/os-release
[2025-07-21 14:03:48] 2025-07-21 18:03:18,019 | INFO     | cat /etc/os-release:
[2025-07-21 14:03:48] NAME="CentOS Linux"
[2025-07-21 14:03:48] VERSION="7 (Core)"
[2025-07-21 14:03:48] ID="centos"
[2025-07-21 14:03:48] ID_LIKE="rhel fedora"
[2025-07-21 14:03:48] VERSION_ID="7"
[2025-07-21 14:03:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-21 14:03:48] ANSI_COLOR="0;31"
[2025-07-21 14:03:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-21 14:03:48] HOME_URL="https://www.centos.org/"
[2025-07-21 14:03:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-21 14:03:48] 
[2025-07-21 14:03:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-21 14:03:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-21 14:03:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-21 14:03:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-21 14:03:48] 
[2025-07-21 14:03:48] 2025-07-21 18:03:18,019 | INFO     | ***************************************
[2025-07-21 14:03:48] 2025-07-21 18:03:18,522 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-21 14:03:48] 2025-07-21 18:03:18,561 | INFO     | sufficient remaining disk space (76408684544 B)
[2025-07-21 14:03:48] 2025-07-21 18:03:18,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-21 14:03:48] 2025-07-21 18:03:18,562 | INFO     | current server update state: UPDATING_FINAL
[2025-07-21 14:03:48] 2025-07-21 18:03:18,562 | INFO     | update_server=False
[2025-07-21 14:03:48] 2025-07-21 18:03:18,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-21 14:03:48] 2025-07-21 18:03:18,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-21 14:03:48] 2025-07-21 18:03:18,563 | INFO     | aborting loop
[2025-07-21 14:03:48] 2025-07-21 18:03:18,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-21 14:03:48] 2025-07-21 18:03:18,856 | INFO     | all job control threads have been joined
[2025-07-21 14:03:48] 2025-07-21 18:03:18,973 | INFO     | all data control threads have been joined
[2025-07-21 14:03:48] 2025-07-21 18:03:19,568 | INFO     | [job] retrieve thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:19,569 | INFO     | [job] job monitor thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:19,579 | INFO     | all payload control threads have been joined
[2025-07-21 14:03:48] 2025-07-21 18:03:19,786 | INFO     | [job] create_data_payload thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:19,865 | INFO     | [job] control thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:19,979 | INFO     | [data] control thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:20,496 | INFO     | [job] validate thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:20,514 | INFO     | [payload] validate_post thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:20,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-21 14:03:48] 2025-07-21 18:03:20,573 | INFO     | [data] copytool_out thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:20,585 | INFO     | [payload] control thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:20,650 | INFO     | [payload] execute_payloads thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:20,888 | INFO     | [payload] failed_post thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:20,891 | INFO     | [payload] validate_pre thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:21,048 | INFO     | [data] copytool_in thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:21,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-21 14:03:48] 2025-07-21 18:03:21,535 | INFO     | [job] queue monitor thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:25,120 | INFO     | [data] queue_monitor thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:28,985 | INFO     | job.realtimelogging is not enabled
[2025-07-21 14:03:48] 2025-07-21 18:03:29,991 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-21 14:03:48] 2025-07-21 18:03:31,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016228742976)>', '<ExcThread(monitor, started 140015891883776)>']
[2025-07-21 14:03:48] 2025-07-21 18:03:36,681 | INFO     | all workflow threads have been joined
[2025-07-21 14:03:48] 2025-07-21 18:03:36,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-21 14:03:48] 2025-07-21 18:03:36,681 | INFO     | traces error code: 0
[2025-07-21 14:03:48] 2025-07-21 18:03:36,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-21 14:03:48] 2025-07-21 18:03:48,330 | INFO     | PID=4140274 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-21 14:03:48] 2025-07-21 18:03:48,331 | INFO     | .. there are 63 such processes running
[2025-07-21 14:03:48] 2025-07-21 18:03:48,331 | INFO     | found 0 job(s) in 20 queues
[2025-07-21 14:03:48] 2025-07-21 18:03:48,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-21 14:03:48] 2025-07-21 18:03:48,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-21 14:03:48] 2025-07-21 18:03:48,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-21 14:03:48] 2025-07-21 18:03:48,331 | INFO     | [monitor] control thread has ended
[2025-07-21 14:03:48] 2025-07-21 18:03:48,475 [wrapper] ==== pilot stdout END ====
[2025-07-21 14:03:48] 2025-07-21 18:03:48,477 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-21 14:03:48] 2025-07-21 18:03:48,479 [wrapper] pilotpid: 4140274
[2025-07-21 14:03:48] 2025-07-21 18:03:48,485 [wrapper] Pilot exit status: 0
[2025-07-21 14:03:48] 2025-07-21 18:03:48,506 [wrapper] pandaids: 6741376745 6741376745
[2025-07-21 14:03:48] 2025-07-21 18:03:48,660 [wrapper] cleanup supervisor_pilot 2456391 4140275
[2025-07-21 14:03:48] 2025-07-21 18:03:48,663 [wrapper] Test setup, not cleaning
[2025-07-21 14:03:48] 2025-07-21 18:03:48,665 [wrapper] apfmon messages muted
[2025-07-21 14:03:48] 2025-07-21 18:03:48,668 [wrapper] ==== wrapper stdout END ====
[2025-07-21 14:03:48] 2025-07-21 18:03:48,670 [wrapper] ==== wrapper stderr END ====
[2025-07-21 14:03:48]  *** Error codes and diagnostics ***
[2025-07-21 14:03:48]     "exeErrorCode": 0,
[2025-07-21 14:03:48]     "exeErrorDiag": "",
[2025-07-21 14:03:48]     "pilotErrorCode": 0,
[2025-07-21 14:03:48]     "pilotErrorDiag": "",
[2025-07-21 14:03:48]  *** Listing of results directory ***
[2025-07-21 14:03:48] total 833384
[2025-07-21 14:03:48] drwx------. 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 07:46 pilot3.tar.gz
[2025-07-21 14:03:48] -rwx------. 1 boincer umatlas     36292 Jul 21 07:50 runpilot2-wrapper.sh
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 07:50 queuedata.json
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas       100 Jul 21 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-21 14:03:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 21 09:18 run_atlas
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas       105 Jul 21 09:18 job.xml
[2025-07-21 14:03:48] -rw-r--r--. 3 boincer umatlas 309004415 Jul 21 09:18 EVNT.45668735._000037.pool.root.1
[2025-07-21 14:03:48] -rw-r--r--. 3 boincer umatlas 309004415 Jul 21 09:18 ATLAS.root_0
[2025-07-21 14:03:48] -rw-r--r--. 2 boincer umatlas    542881 Jul 21 09:18 input.tar.gz
[2025-07-21 14:03:48] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 09:18 start_atlas.sh
[2025-07-21 14:03:48] drwxrwx--x. 2 boincer umatlas      4096 Jul 21 09:18 shared
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas         0 Jul 21 09:18 boinc_lockfile
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas      2513 Jul 21 10:28 pandaJob.out
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas    976665 Jul 21 10:28 agis_schedconf.cvmfs.json
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas 228577186 Jul 21 14:02 HITS.45668738._000935.pool.root.1
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas       531 Jul 21 14:02 boinc_task_state.xml
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas      6932 Jul 21 14:02 init_data.xml
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas      1044 Jul 21 14:02 memory_monitor_summary.json
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas   1593055 Jul 21 14:03 agis_ddmendpoints.agis.ALL.json
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas    387343 Jul 21 14:03 log.45668738._000935.job.log.tgz.1
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas      7789 Jul 21 14:03 heartbeat.json
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas        28 Jul 21 14:03 wrapper_checkpoint.txt
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas      8192 Jul 21 14:03 boinc_mmap_file
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas       823 Jul 21 14:03 pilotlog.txt
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas        96 Jul 21 14:03 pilot_heartbeat.json
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas   1075766 Jul 21 14:03 log.45668738._000935.job.log.1
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas       357 Jul 21 14:03 output.list
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas       620 Jul 21 14:03 runtime_log
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas   1484800 Jul 21 14:03 result.tar.gz
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas      8741 Jul 21 14:03 runtime_log.err
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas       783 Jul 21 14:03 8kTMDmOD4x7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqtsKDmWR7h0m.diag
[2025-07-21 14:03:48] -rw-r--r--. 1 boincer umatlas     23273 Jul 21 14:03 stderr.txt
[2025-07-21 14:03:48] HITS file was successfully produced:
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas 228577186 Jul 21 14:02 shared/HITS.pool.root.1
[2025-07-21 14:03:48]  *** Contents of shared directory: ***
[2025-07-21 14:03:48] total 526988
[2025-07-21 14:03:48] -rw-r--r--. 3 boincer umatlas 309004415 Jul 21 09:18 ATLAS.root_0
[2025-07-21 14:03:48] -rw-r--r--. 2 boincer umatlas    542881 Jul 21 09:18 input.tar.gz
[2025-07-21 14:03:48] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 09:18 start_atlas.sh
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas 228577186 Jul 21 14:02 HITS.pool.root.1
[2025-07-21 14:03:48] -rw-------. 1 boincer umatlas   1484800 Jul 21 14:03 result.tar.gz
14:03:49 (4130096): run_atlas exited; CPU time 44998.501750
14:03:49 (4130096): called boinc_finish(0)

</stderr_txt>
]]>

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