Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:54:45 (997624): wrapper (7.7.26015): starting
07:54:45 (997624): wrapper: running run_atlas (--nthreads 10)
[2025-07-21 07:54:45] Arguments: --nthreads 10
[2025-07-21 07:54:45] Threads: 10
[2025-07-21 07:54:45] Checking for CVMFS
[2025-07-21 07:54:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-21 07:54:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-21 07:54:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-21 07:54:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-21 07:54:46] 2.12.6.0 4120630 9708 268500 148578 0 207 22878757 32935936 10253 16776704 0 35442482 99.530 48742982 29640 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-21 07:54:46] CVMFS is ok
[2025-07-21 07:54:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-21 07:54:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-21 07:54:46] Further information can be found at the LHC@home message board.
[2025-07-21 07:54:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-21 07:54:46] Checking for apptainer binary...
[2025-07-21 07:54:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-21 07:54:46] Running /usr/bin/apptainer --version
[2025-07-21 07:54:46] apptainer version 1.4.1-1.el9
[2025-07-21 07:54:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-21 07:54:46] c-5-4.aglt2.org
[2025-07-21 07:54:46] apptainer works
[2025-07-21 07:54:46] Set ATHENA_PROC_NUMBER=10
[2025-07-21 07:54:46] Set ATHENA_CORE_NUMBER=10
[2025-07-21 07:54:46] Starting ATLAS job with PandaID=6741376779
[2025-07-21 07:54:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-21 13:27:49]  *** The last 200 lines of the pilot log: ***
[2025-07-21 13:27:49] 2025-07-21 17:27:13,585 | INFO     | monitor loop #1081: job 0:6741376779 is in state 'finished'
[2025-07-21 13:27:49] 2025-07-21 17:27:13,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,330 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-21 13:27:49] 2025-07-21 17:27:14,337 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2639.9728250000007
[2025-07-21 13:27:49] 2025-07-21 17:27:14,344 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741376779/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,345 | INFO     | extracted standard info from prmon json
[2025-07-21 13:27:49] 2025-07-21 17:27:14,345 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 13:27:49] 2025-07-21 17:27:14,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 13:27:49] 2025-07-21 17:27:14,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 13:27:49] 2025-07-21 17:27:14,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 13:27:49] 2025-07-21 17:27:14,353 | INFO     | fitting pss+swap vs Time
[2025-07-21 13:27:49] 2025-07-21 17:27:14,354 | INFO     | sum of square deviations: 10643723484.756924
[2025-07-21 13:27:49] 2025-07-21 17:27:14,357 | INFO     | sum of deviations: 20694223115.553825
[2025-07-21 13:27:49] 2025-07-21 17:27:14,357 | INFO     | mean x: 1753108884.083077
[2025-07-21 13:27:49] 2025-07-21 17:27:14,357 | INFO     | mean y: 2249766.6461538463
[2025-07-21 13:27:49] 2025-07-21 17:27:14,357 | INFO     | -- intersect: -3406259148.963214
[2025-07-21 13:27:49] 2025-07-21 17:27:14,357 | INFO     | intersect: -3406259148.963214
[2025-07-21 13:27:49] 2025-07-21 17:27:14,358 | INFO     | chi2: 1.8762902481271757
[2025-07-21 13:27:49] 2025-07-21 17:27:14,359 | INFO     | sum of square deviations: 10160004523.371906
[2025-07-21 13:27:49] 2025-07-21 17:27:14,362 | INFO     | sum of deviations: 25642370722.80313
[2025-07-21 13:27:49] 2025-07-21 17:27:14,362 | INFO     | mean x: 1753108731.590625
[2025-07-21 13:27:49] 2025-07-21 17:27:14,362 | INFO     | mean y: 2251310.334375
[2025-07-21 13:27:49] 2025-07-21 17:27:14,362 | INFO     | -- intersect: -4422339634.425427
[2025-07-21 13:27:49] 2025-07-21 17:27:14,362 | INFO     | intersect: -4422339634.425427
[2025-07-21 13:27:49] 2025-07-21 17:27:14,363 | INFO     | chi2: 1.8286043336099265
[2025-07-21 13:27:49] 2025-07-21 17:27:14,363 | INFO     | current chi2=1.8286043336099265 (change=2.5414998860036215 %)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,363 | INFO     | right removable region: 319
[2025-07-21 13:27:49] 2025-07-21 17:27:14,364 | INFO     | sum of square deviations: 10159848908.799942
[2025-07-21 13:27:49] 2025-07-21 17:27:14,366 | INFO     | sum of deviations: -27764038777.000088
[2025-07-21 13:27:49] 2025-07-21 17:27:14,366 | INFO     | mean x: 1753109036.6
[2025-07-21 13:27:49] 2025-07-21 17:27:14,367 | INFO     | mean y: 2264954.25
[2025-07-21 13:27:49] 2025-07-21 17:27:14,367 | INFO     | -- intersect: 4793023922.162727
[2025-07-21 13:27:49] 2025-07-21 17:27:14,367 | INFO     | intersect: 4793023922.162727
[2025-07-21 13:27:49] 2025-07-21 17:27:14,367 | INFO     | chi2: 0.39664132248853473
[2025-07-21 13:27:49] 2025-07-21 17:27:14,367 | INFO     | current chi2=0.39664132248853473 (change=78.86034301545598 %)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,368 | INFO     | sum of square deviations: 9690877609.885717
[2025-07-21 13:27:49] 2025-07-21 17:27:14,371 | INFO     | sum of deviations: -25313335271.314285
[2025-07-21 13:27:49] 2025-07-21 17:27:14,371 | INFO     | mean x: 1753109189.1142857
[2025-07-21 13:27:49] 2025-07-21 17:27:14,371 | INFO     | mean y: 2264137.425396825
[2025-07-21 13:27:49] 2025-07-21 17:27:14,371 | INFO     | -- intersect: 4581523360.140435
[2025-07-21 13:27:49] 2025-07-21 17:27:14,371 | INFO     | intersect: 4581523360.140435
[2025-07-21 13:27:49] 2025-07-21 17:27:14,372 | INFO     | chi2: 0.37261441179348237
[2025-07-21 13:27:49] 2025-07-21 17:27:14,372 | INFO     | current chi2=0.37261441179348237 (change=6.057591413901884 %)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,372 | INFO     | left removable region: 20
[2025-07-21 13:27:49] 2025-07-21 17:27:14,372 | INFO     | sum of square deviations: 8287923097.785935
[2025-07-21 13:27:49] 2025-07-21 17:27:14,375 | INFO     | sum of deviations: 4457439703.183929
[2025-07-21 13:27:49] 2025-07-21 17:27:14,375 | INFO     | mean x: 1753109311.103679
[2025-07-21 13:27:49] 2025-07-21 17:27:14,375 | INFO     | mean y: 2257529.8327759197
[2025-07-21 13:27:49] 2025-07-21 17:27:14,375 | INFO     | -- intersect: -940605833.53778
[2025-07-21 13:27:49] 2025-07-21 17:27:14,375 | INFO     | intersect: -940605833.53778
[2025-07-21 13:27:49] 2025-07-21 17:27:14,376 | INFO     | chi2: 0.17394323060516514
[2025-07-21 13:27:49] 2025-07-21 17:27:14,376 | INFO     | -- intersect: -940605833.53778
[2025-07-21 13:27:49] 2025-07-21 17:27:14,376 | INFO     | current memory leak: 0.54 B/s (using 299 data points, chi2=0.17)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,377 | INFO     | could have reported an average CPU frequency of 2604 MHz (14 samples)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,377 | INFO     | ..............................
[2025-07-21 13:27:49] 2025-07-21 17:27:14,377 | INFO     | . Timing measurements:
[2025-07-21 13:27:49] 2025-07-21 17:27:14,377 | INFO     | . get job = 0 s
[2025-07-21 13:27:49] 2025-07-21 17:27:14,377 | INFO     | . initial setup = 5 s
[2025-07-21 13:27:49] 2025-07-21 17:27:14,378 | INFO     | . payload setup = 23 s
[2025-07-21 13:27:49] 2025-07-21 17:27:14,378 | INFO     | . stage-in = 0 s
[2025-07-21 13:27:49] 2025-07-21 17:27:14,378 | INFO     | . payload execution = 19837 s
[2025-07-21 13:27:49] 2025-07-21 17:27:14,378 | INFO     | . stage-out = 7 s
[2025-07-21 13:27:49] 2025-07-21 17:27:14,378 | INFO     | . log creation = 0 s
[2025-07-21 13:27:49] 2025-07-21 17:27:14,378 | INFO     | ..............................
[2025-07-21 13:27:49] 2025-07-21 17:27:14,490 | INFO     | 
[2025-07-21 13:27:49] 2025-07-21 17:27:14,490 | INFO     | job summary report
[2025-07-21 13:27:49] 2025-07-21 17:27:14,490 | INFO     | --------------------------------------------------
[2025-07-21 13:27:49] 2025-07-21 17:27:14,490 | INFO     | PanDA job id: 6741376779
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | task id: 45668738
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | errors: (none)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | pilot state: finished 
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | transexitcode: 0
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | exeerrorcode: 0
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | exeerrordiag: 
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | exitcode: 0
[2025-07-21 13:27:49] 2025-07-21 17:27:14,491 | INFO     | exitmsg: OK
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | cpuconsumptiontime: 68289 s
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | nevents: 400
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | neventsw: 0
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | pid: 1010035
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | pgrp: 1010035
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | corecount: 10
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | event service: False
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | sizes: {0: 2397406, 1: 2397406, 12: 2397434, 15: 2397724, 23: 2397752, 19864: 2430843, 19872: 2439897, 19877: 2440035}
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | --------------------------------------------------
[2025-07-21 13:27:49] 2025-07-21 17:27:14,492 | INFO     | 
[2025-07-21 13:27:49] 2025-07-21 17:27:14,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-21 13:27:49] 2025-07-21 17:27:14,511 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,511 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-21 13:27:49] 2025-07-21 17:27:14,514 | INFO     | job 6741376779 has completed (purged errors)
[2025-07-21 13:27:49] 2025-07-21 17:27:14,514 | INFO     | overall cleanup function is called
[2025-07-21 13:27:49] 2025-07-21 17:27:15,524 | INFO     | --- collectZombieJob: --- 10, [1010035]
[2025-07-21 13:27:49] 2025-07-21 17:27:15,525 | INFO     | zombie collector waiting for pid 1010035
[2025-07-21 13:27:49] 2025-07-21 17:27:15,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-21 13:27:49] 2025-07-21 17:27:15,525 | INFO     | collected zombie processes
[2025-07-21 13:27:49] 2025-07-21 17:27:15,525 | INFO     | will attempt to kill all subprocesses of pid=1010035
[2025-07-21 13:27:49] 2025-07-21 17:27:15,877 | INFO     | PID=1001974 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-21 13:27:49] 2025-07-21 17:27:15,877 | INFO     | .. there are 30 such processes running
[2025-07-21 13:27:49] 2025-07-21 17:27:16,158 | INFO     | process IDs to be killed: [1010035] (in reverse order)
[2025-07-21 13:27:49] 2025-07-21 17:27:16,272 | WARNING  | found no corresponding commands to process id(s)
[2025-07-21 13:27:49] 2025-07-21 17:27:16,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-21 13:27:49] 2025-07-21 17:27:16,285 | INFO     | did not find any defunct processes belonging to 1010035
[2025-07-21 13:27:49] 2025-07-21 17:27:16,298 | INFO     | did not find any defunct processes belonging to 1010035
[2025-07-21 13:27:49] 2025-07-21 17:27:16,299 | INFO     | ready for new job
[2025-07-21 13:27:49] 2025-07-21 17:27:16,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-21 13:27:49] 2025-07-21 17:27:16,303 | INFO     | ***************************************
[2025-07-21 13:27:49] 2025-07-21 17:27:16,303 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-21 13:27:49] 2025-07-21 17:27:16,303 | INFO     | ***************************************
[2025-07-21 13:27:49] 2025-07-21 17:27:16,303 | INFO     | 
[2025-07-21 13:27:49] 2025-07-21 17:27:16,308 | INFO     | architecture information:
[2025-07-21 13:27:49] 2025-07-21 17:27:16,309 | INFO     | executing command: cat /etc/os-release
[2025-07-21 13:27:49] 2025-07-21 17:27:16,383 | INFO     | cat /etc/os-release:
[2025-07-21 13:27:49] NAME="CentOS Linux"
[2025-07-21 13:27:49] VERSION="7 (Core)"
[2025-07-21 13:27:49] ID="centos"
[2025-07-21 13:27:49] ID_LIKE="rhel fedora"
[2025-07-21 13:27:49] VERSION_ID="7"
[2025-07-21 13:27:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-21 13:27:49] ANSI_COLOR="0;31"
[2025-07-21 13:27:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-21 13:27:49] HOME_URL="https://www.centos.org/"
[2025-07-21 13:27:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-21 13:27:49] 
[2025-07-21 13:27:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-21 13:27:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-21 13:27:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-21 13:27:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-21 13:27:49] 
[2025-07-21 13:27:49] 2025-07-21 17:27:16,383 | INFO     | ***************************************
[2025-07-21 13:27:49] 2025-07-21 17:27:16,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-21 13:27:49] 2025-07-21 17:27:16,962 | INFO     | sufficient remaining disk space (76368838656 B)
[2025-07-21 13:27:49] 2025-07-21 17:27:16,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-21 13:27:49] 2025-07-21 17:27:16,963 | INFO     | current server update state: UPDATING_FINAL
[2025-07-21 13:27:49] 2025-07-21 17:27:16,963 | INFO     | update_server=False
[2025-07-21 13:27:49] 2025-07-21 17:27:16,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-21 13:27:49] 2025-07-21 17:27:17,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-21 13:27:49] 2025-07-21 17:27:17,098 | INFO     | aborting loop
[2025-07-21 13:27:49] 2025-07-21 17:27:17,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-21 13:27:49] 2025-07-21 17:27:17,707 | INFO     | all data control threads have been joined
[2025-07-21 13:27:49] 2025-07-21 17:27:17,722 | INFO     | all job control threads have been joined
[2025-07-21 13:27:49] 2025-07-21 17:27:17,922 | INFO     | all payload control threads have been joined
[2025-07-21 13:27:49] 2025-07-21 17:27:17,969 | INFO     | [job] retrieve thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:18,004 | INFO     | [job] validate thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:18,104 | INFO     | [job] job monitor thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:18,111 | INFO     | [payload] validate_post thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:18,469 | INFO     | [payload] execute_payloads thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:18,716 | INFO     | [data] control thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:18,729 | INFO     | [job] control thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:18,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:18,928 | INFO     | [payload] control thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:19,049 | INFO     | [payload] failed_post thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:19,137 | INFO     | [data] copytool_out thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:19,252 | INFO     | [payload] validate_pre thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:19,277 | INFO     | [job] create_data_payload thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:19,393 | INFO     | [data] copytool_in thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:19,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-21 13:27:49] 2025-07-21 17:27:19,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-21 13:27:49] 2025-07-21 17:27:20,512 | INFO     | [job] queue monitor thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:23,771 | INFO     | [data] queue_monitor thread has finished
[2025-07-21 13:27:49] 2025-07-21 17:27:23,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971705014080)>', '<ExcThread(monitor, started 139971356776192)>']
[2025-07-21 13:27:49] 2025-07-21 17:27:28,930 | INFO     | all workflow threads have been joined
[2025-07-21 13:27:49] 2025-07-21 17:27:28,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-21 13:27:49] 2025-07-21 17:27:28,931 | INFO     | traces error code: 0
[2025-07-21 13:27:49] 2025-07-21 17:27:28,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-21 13:27:49] 2025-07-21 17:27:48,519 | INFO     | PID=1001974 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-21 13:27:49] 2025-07-21 17:27:48,523 | INFO     | .. there are 30 such processes running
[2025-07-21 13:27:49] 2025-07-21 17:27:48,524 | INFO     | found 0 job(s) in 20 queues
[2025-07-21 13:27:49] 2025-07-21 17:27:48,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-21 13:27:49] 2025-07-21 17:27:48,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-21 13:27:49] 2025-07-21 17:27:48,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-21 13:27:49] 2025-07-21 17:27:48,525 | INFO     | [monitor] control thread has ended
[2025-07-21 13:27:49] 2025-07-21 17:27:48,880 [wrapper] ==== pilot stdout END ====
[2025-07-21 13:27:49] 2025-07-21 17:27:48,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-21 13:27:49] 2025-07-21 17:27:48,887 [wrapper] pilotpid: 1001974
[2025-07-21 13:27:49] 2025-07-21 17:27:48,890 [wrapper] Pilot exit status: 0
[2025-07-21 13:27:49] 2025-07-21 17:27:48,941 [wrapper] pandaids: 6741376779
[2025-07-21 13:27:49] 2025-07-21 17:27:49,028 [wrapper] cleanup supervisor_pilot 2191158 1001975
[2025-07-21 13:27:49] 2025-07-21 17:27:49,032 [wrapper] Test setup, not cleaning
[2025-07-21 13:27:49] 2025-07-21 17:27:49,036 [wrapper] apfmon messages muted
[2025-07-21 13:27:49] 2025-07-21 17:27:49,039 [wrapper] ==== wrapper stdout END ====
[2025-07-21 13:27:49] 2025-07-21 17:27:49,043 [wrapper] ==== wrapper stderr END ====
[2025-07-21 13:27:49]  *** Error codes and diagnostics ***
[2025-07-21 13:27:49]     "exeErrorCode": 0,
[2025-07-21 13:27:49]     "exeErrorDiag": "",
[2025-07-21 13:27:49]     "pilotErrorCode": 0,
[2025-07-21 13:27:49]     "pilotErrorDiag": "",
[2025-07-21 13:27:49]  *** Listing of results directory ***
[2025-07-21 13:27:49] total 530900
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 07:46 pilot3.tar.gz
[2025-07-21 13:27:49] -rwx------. 1 boincer umatlas     36292 Jul 21 07:50 runpilot2-wrapper.sh
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 07:50 queuedata.json
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas       100 Jul 21 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-21 13:27:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 21 07:54 run_atlas
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas       105 Jul 21 07:54 job.xml
[2025-07-21 13:27:49] -rw-r--r--. 2 boincer umatlas 304757583 Jul 21 07:54 EVNT.45668735._000038.pool.root.1
[2025-07-21 13:27:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 07:54 start_atlas.sh
[2025-07-21 13:27:49] drwxrwx--x. 2 boincer umatlas      4096 Jul 21 07:54 shared
[2025-07-21 13:27:49] -rw-r--r--. 2 boincer umatlas    542878 Jul 21 07:54 input.tar.gz
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas         0 Jul 21 07:54 boinc_lockfile
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas      2513 Jul 21 07:54 pandaJob.out
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas    977242 Jul 21 07:55 agis_schedconf.cvmfs.json
[2025-07-21 13:27:49] drwx------. 4 boincer umatlas      4096 Jul 21 07:55 pilot3
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas      6656 Jul 21 13:22 init_data.xml
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas 231083495 Jul 21 13:26 HITS.45668738._000969.pool.root.1
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas       531 Jul 21 13:26 boinc_task_state.xml
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas      1041 Jul 21 13:26 memory_monitor_summary.json
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas   1593055 Jul 21 13:27 agis_ddmendpoints.agis.ALL.json
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas    476615 Jul 21 13:27 log.45668738._000969.job.log.tgz.1
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas      7814 Jul 21 13:27 heartbeat.json
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas      8192 Jul 21 13:27 boinc_mmap_file
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas        28 Jul 21 13:27 wrapper_checkpoint.txt
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas        95 Jul 21 13:27 pilot_heartbeat.json
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas       823 Jul 21 13:27 pilotlog.txt
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas   1490606 Jul 21 13:27 log.45668738._000969.job.log.1
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas       357 Jul 21 13:27 output.list
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas       620 Jul 21 13:27 runtime_log
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas   1986560 Jul 21 13:27 result.tar.gz
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas      8648 Jul 21 13:27 runtime_log.err
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas       654 Jul 21 13:27 cKoMDmOD4x7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6tsKDmnlaROo.diag
[2025-07-21 13:27:49] -rw-r--r--. 1 boincer umatlas     21049 Jul 21 13:27 stderr.txt
[2025-07-21 13:27:49] HITS file was successfully produced:
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas 231083495 Jul 21 13:26 shared/HITS.pool.root.1
[2025-07-21 13:27:49]  *** Contents of shared directory: ***
[2025-07-21 13:27:49] total 525776
[2025-07-21 13:27:49] -rw-r--r--. 2 boincer umatlas 304757583 Jul 21 07:54 ATLAS.root_0
[2025-07-21 13:27:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 21 07:54 start_atlas.sh
[2025-07-21 13:27:49] -rw-r--r--. 2 boincer umatlas    542878 Jul 21 07:54 input.tar.gz
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas 231083495 Jul 21 13:26 HITS.pool.root.1
[2025-07-21 13:27:49] -rw-------. 1 boincer umatlas   1986560 Jul 21 13:27 result.tar.gz
13:27:50 (997624): run_atlas exited; CPU time 68908.149902
13:27:50 (997624): called boinc_finish(0)

</stderr_txt>
]]>

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