Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-21 07:30:21 (131876): Detected: vboxwrapper 26206
2025-07-21 07:30:21 (131876): Detected: BOINC client v8.0.2
2025-07-21 07:30:21 (131876): Detected: VirtualBox VboxManage Interface (Version: 7.0.26)
2025-07-21 07:30:21 (131876): Successfully copied 'init_data.xml' to the shared directory.
2025-07-21 07:30:21 (131876): Create VM. (boinc_7529ac6922518e0a, slot#2)
2025-07-21 07:30:21 (131876): Setting Memory Size for VM. (4200MB)
2025-07-21 07:30:22 (131876): Setting CPU Count for VM. (2)
2025-07-21 07:30:22 (131876): Setting Chipset Options for VM.
2025-07-21 07:30:22 (131876): Setting Graphics Controller Options for VM.
2025-07-21 07:30:22 (131876): Setting Boot Options for VM.
2025-07-21 07:30:22 (131876): Setting Network Configuration for NAT.
2025-07-21 07:30:22 (131876): Enabling VM Network Access.
2025-07-21 07:30:22 (131876): Disabling USB Support for VM.
2025-07-21 07:30:22 (131876): Disabling COM Port Support for VM.
2025-07-21 07:30:22 (131876): Disabling LPT Port Support for VM.
2025-07-21 07:30:22 (131876): Disabling Audio Support for VM.
2025-07-21 07:30:22 (131876): Disabling Clipboard Support for VM.
2025-07-21 07:30:22 (131876): Disabling Drag and Drop Support for VM.
2025-07-21 07:30:22 (131876): Adding storage controller(s) to VM.
2025-07-21 07:30:22 (131876): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-21 07:30:24 (131876): Adding VirtualBox Guest Additions to VM.
2025-07-21 07:30:24 (131876): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-21 07:30:24 (131876): forwarding host port 52857 to guest port 80
2025-07-21 07:30:24 (131876): Enabling remote desktop for VM.
2025-07-21 07:30:24 (131876): Enabling shared directory for VM.
2025-07-21 07:30:24 (131876): Starting VM using VBoxManage interface. (boinc_7529ac6922518e0a, slot#2)
2025-07-21 07:30:25 (131876): Successfully started VM. (PID = '132482')
2025-07-21 07:30:25 (131876): Reporting VM Process ID to BOINC.
2025-07-21 07:30:25 (131876): Guest Log: BIOS: VirtualBox 7.0.26
2025-07-21 07:30:25 (131876): Guest Log: CPUID EDX: 0x178bfbff
2025-07-21 07:30:25 (131876): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-21 07:30:25 (131876): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-21 07:30:25 (131876): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-21 07:30:25 (131876): Detected: Web Application Enabled (http://localhost:52857)
2025-07-21 07:30:25 (131876): Detected: Remote Desktop Enabled (localhost:36433)
2025-07-21 07:30:25 (131876): Preference change detected
2025-07-21 07:30:25 (131876): Setting CPU throttle for VM. (100%)
2025-07-21 07:30:26 (131876): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-21 07:30:27 (131876): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-21 07:30:27 (131876): Guest Log: BIOS: Booting from Hard Disk...
2025-07-21 07:30:30 (131876): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-21 07:30:30 (131876): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-21 07:30:30 (131876): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-21 07:30:36 (131876): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-21 07:30:36 (131876): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-21 07:30:44 (131876): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-21 07:30:44 (131876): Guest Log: 00:00:00.000240 main     Log opened 2025-07-21T05:30:42.906526000Z
2025-07-21 07:30:44 (131876): Guest Log: 00:00:00.000393 main     OS Product: Linux
2025-07-21 07:30:44 (131876): Guest Log: 00:00:00.000435 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-21 07:30:44 (131876): Guest Log: 00:00:00.000467 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-21 07:30:44 (131876): Guest Log: 00:00:00.000498 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-21 07:30:44 (131876): Guest Log: 00:00:00.000499 main     Process ID: 1262
2025-07-21 07:30:44 (131876): Guest Log: 00:00:00.000500 main     Package type: LINUX_64BITS_GENERIC
2025-07-21 07:30:44 (131876): Guest Log: 00:00:00.002034 main     5.2.32 r132073 started. Verbose level = 0
2025-07-21 07:30:44 (131876): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-21 07:30:44 (131876): Guest Log: [INFO] Mounting shared directory
2025-07-21 07:30:45 (131876): Guest Log: [INFO] Checking for init_data.xml
2025-07-21 07:30:50 (131876): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-21 07:30:50 (131876): Guest Log: [INFO] Detected branch: prod
2025-07-21 07:30:50 (131876): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-21 07:30:50 (131876): Guest Log: Copying input files
2025-07-21 07:30:52 (131876): Guest Log: Copied input files into RunAtlas.
2025-07-21 07:30:52 (131876): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-07-21 07:31:03 (131876): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-21 07:31:03 (131876): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-21 07:31:03 (131876): Guest Log: 2.6.3.0 1538 0 31536 148568 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-07-21 07:31:04 (131876): Guest Log: copied the webapp to /var/www
2025-07-21 07:31:04 (131876): Guest Log: ATHENA_PROC_NUMBER=2
2025-07-21 07:31:04 (131876): Guest Log: ATHENA_CORE_NUMBER=2
2025-07-21 07:31:04 (131876): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-21 07:31:04 (131876): Guest Log:  *** Starting ATLAS job. (PandaID=6740866571 taskID=45668757) ***
2025-07-21 09:09:26 (131876): Status Report: Elapsed Time: '6000.000000'
2025-07-21 09:09:26 (131876): Status Report: CPU Time: '10958.360000'
2025-07-21 10:48:26 (131876): Status Report: Elapsed Time: '12000.000000'
2025-07-21 10:48:26 (131876): Status Report: CPU Time: '22778.080000'
2025-07-21 12:27:27 (131876): Status Report: Elapsed Time: '18000.000000'
2025-07-21 12:27:27 (131876): Status Report: CPU Time: '34592.630000'
2025-07-21 14:06:27 (131876): Status Report: Elapsed Time: '24000.000000'
2025-07-21 14:06:27 (131876): Status Report: CPU Time: '46412.780000'
2025-07-21 15:45:28 (131876): Status Report: Elapsed Time: '30000.000000'
2025-07-21 15:45:28 (131876): Status Report: CPU Time: '58232.680000'
2025-07-21 17:24:28 (131876): Status Report: Elapsed Time: '36000.000000'
2025-07-21 17:24:28 (131876): Status Report: CPU Time: '69811.700000'
2025-07-21 17:24:37 (131876): Guest Log:  *** Job finished ***
2025-07-21 17:24:37 (131876): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:16,760 | INFO     | all workflow threads have been joined
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:16,760 | INFO     | end of generic workflow (traces error code: 0)
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:16,761 | INFO     | traces error code: 0
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:16,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:35,953 | INFO     | PID=5841 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:35,954 | INFO     | found 0 job(s) in 20 queues
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:35,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:35,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:35,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:35,954 | INFO     | [monitor] control thread has ended
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,050 [wrapper] ==== pilot stdout END ====
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,056 [wrapper] ==== wrapper stdout RESUME ====
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,061 [wrapper] pilotpid: 5841
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,067 [wrapper] Pilot exit status: 0
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,205 [wrapper] pandaids: 6740866571
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,237 [wrapper] cleanup supervisor_pilot 13904 5842
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,243 [wrapper] Test setup, not cleaning
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,249 [wrapper] apfmon messages muted
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,256 [wrapper] ==== wrapper stdout END ====
2025-07-21 17:24:37 (131876): Guest Log: 2025-07-21 15:24:36,262 [wrapper] ==== wrapper stderr END ====
2025-07-21 17:24:37 (131876): Guest Log:  *** Error codes and diagnostics ***
2025-07-21 17:24:37 (131876): Guest Log:     "exeErrorCode": 0,
2025-07-21 17:24:37 (131876): Guest Log:     "exeErrorDiag": "",
2025-07-21 17:24:37 (131876): Guest Log:     "pilotErrorCode": 0,
2025-07-21 17:24:37 (131876): Guest Log:     "pilotErrorDiag": "",
2025-07-21 17:24:37 (131876): Guest Log:  *** Listing of results directory ***
2025-07-21 17:24:37 (131876): Guest Log: total 201888
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 21 03:16 pilot3.tar.gz
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 21 03:19 queuedata.json
2025-07-21 17:24:37 (131876): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 21 03:20 runpilot2-wrapper.sh
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 atlas atlas    542876 Jul 21 05:30 input.tar.gz
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 21 05:30 start_atlas.sh
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 atlas atlas      6463 Jul 21 05:30 init_data.xml
2025-07-21 17:24:37 (131876): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 21 05:30 EVNT.45668754._000030.pool.root.1 -> /data/./ATLAS.root_0
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 atlas atlas      2538 Jul 21 05:31 pandaJob.out
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas    977269 Jul 21 05:32 agis_schedconf.cvmfs.json
2025-07-21 17:24:37 (131876): Guest Log: drwx------. 4 atlas atlas      4096 Jul 21 05:32 pilot3
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas 196229363 Jul 21 15:22 HITS.45668757._000732.pool.root.1
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas      1028 Jul 21 15:23 memory_monitor_summary.json
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas   1593055 Jul 21 15:23 agis_ddmendpoints.agis.ALL.json
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas    462784 Jul 21 15:23 log.45668757._000732.job.log.tgz.1
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas        95 Jul 21 15:23 pilot_heartbeat.json
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas      7807 Jul 21 15:24 heartbeat.json
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas       744 Jul 21 15:24 pilotlog.txt
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas   2888501 Jul 21 15:24 log.45668757._000732.job.log.1
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas       357 Jul 21 15:24 output.list
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 21 15:24 runtime_log
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas   3368960 Jul 21 15:24 result.tar.gz
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas       665 Jul 21 15:24 scpLDmlFwx7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTnFLDmGMrJxm.diag
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 atlas atlas      8612 Jul 21 15:24 runtime_log.err
2025-07-21 17:24:37 (131876): Guest Log: Looking for outputfile HITS.45668757._000732.pool.root.1
2025-07-21 17:24:37 (131876): Guest Log: HITS file was successfully produced
2025-07-21 17:24:37 (131876): Guest Log: -rw-------. 1 atlas atlas 196229363 Jul 21 15:22 /home/atlas/RunAtlas/HITS.45668757._000732.pool.root.1
2025-07-21 17:24:37 (131876): Guest Log: Successfully finished the ATLAS job!
2025-07-21 17:24:37 (131876): Guest Log: Copying the results back to the shared directory!
2025-07-21 17:24:37 (131876): Guest Log:  *** Contents of shared directory: ***
2025-07-21 17:24:37 (131876): Guest Log: total 273292
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 root root 275907637 Jul 21 05:30 ATLAS.root_0
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 root root      6463 Jul 21 05:30 init_data.xml
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 root root    542876 Jul 21 05:30 input.tar.gz
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 root root   3368960 Jul 21 15:24 result.tar.gz
2025-07-21 17:24:37 (131876): Guest Log: -rw-r--r--. 1 root root     15095 Jul 21 05:30 start_atlas.sh
2025-07-21 17:24:37 (131876): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-21 17:24:37 (131876): VM Completion File Detected.
2025-07-21 17:24:37 (131876): Powering off VM.
2025-07-21 17:24:38 (131876): Successfully stopped VM.
2025-07-21 17:24:38 (131876): Deregistering VM. (boinc_7529ac6922518e0a, slot#2)
2025-07-21 17:24:38 (131876): Removing network bandwidth throttle group from VM.
2025-07-21 17:24:38 (131876): Removing VM from VirtualBox.
17:24:43 (131876): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN