Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:21:39 (1373794): wrapper (7.7.26015): starting
23:21:39 (1373794): wrapper: running run_atlas (--nthreads 8)
[2025-07-20 23:21:39] Arguments: --nthreads 8
[2025-07-20 23:21:39] Threads: 8
[2025-07-20 23:21:39] Checking for CVMFS
[2025-07-20 23:21:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-20 23:21:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-20 23:21:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-20 23:21:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-20 23:21:41] 2.12.6.0 3531214 9169 170928 148565 3 133 18254351 32935937 17452 16776704 0 5828836 99.844 4312572 10257 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-20 23:21:41] CVMFS is ok
[2025-07-20 23:21:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-20 23:21:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-20 23:21:41] Further information can be found at the LHC@home message board.
[2025-07-20 23:21:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-20 23:21:41] Checking for apptainer binary...
[2025-07-20 23:21:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-20 23:21:41] Running /usr/bin/apptainer --version
[2025-07-20 23:21:41] apptainer version 1.4.1-1.el9
[2025-07-20 23:21:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-20 23:21:41] c6-12-25-2.aglt2.org
[2025-07-20 23:21:41] apptainer works
[2025-07-20 23:21:41] Set ATHENA_PROC_NUMBER=8
[2025-07-20 23:21:41] Set ATHENA_CORE_NUMBER=8
[2025-07-20 23:21:41] Starting ATLAS job with PandaID=6740865790
[2025-07-20 23:21:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-21 12:53:35]  *** The last 200 lines of the pilot log: ***
[2025-07-21 12:53:35] 2025-07-21 16:52:57,584 | INFO     | monitor loop #2185: job 0:6740865790 is in state 'finished'
[2025-07-21 12:53:35] 2025-07-21 16:52:57,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-21 12:53:35] 2025-07-21 16:52:57,897 | INFO     | PID=1382374 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-21 12:53:35] 2025-07-21 16:52:57,898 | INFO     | .. there are 13 such processes running
[2025-07-21 12:53:35] 2025-07-21 16:52:58,654 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-21 12:53:35] 2025-07-21 16:52:58,701 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.9996250000003
[2025-07-21 12:53:35] 2025-07-21 16:52:58,748 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6740865790/memory_monitor_summary.json (trf name=prmon)
[2025-07-21 12:53:35] 2025-07-21 16:52:58,750 | INFO     | extracted standard info from prmon json
[2025-07-21 12:53:35] 2025-07-21 16:52:58,751 | INFO     | extracted standard memory fields from prmon json
[2025-07-21 12:53:35] 2025-07-21 16:52:58,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-21 12:53:35] 2025-07-21 16:52:58,752 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-21 12:53:35] 2025-07-21 16:52:58,752 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-21 12:53:35] 2025-07-21 16:52:58,786 | INFO     | fitting pss+swap vs Time
[2025-07-21 12:53:35] 2025-07-21 16:52:58,789 | INFO     | sum of square deviations: 156388324973.4271
[2025-07-21 12:53:35] 2025-07-21 16:52:58,815 | INFO     | sum of deviations: -14481244135.401638
[2025-07-21 12:53:35] 2025-07-21 16:52:58,816 | INFO     | mean x: 1753092465.1959798
[2025-07-21 12:53:35] 2025-07-21 16:52:58,816 | INFO     | mean y: 2068491.1243718592
[2025-07-21 12:53:35] 2025-07-21 16:52:58,816 | INFO     | -- intersect: 164401325.01558298
[2025-07-21 12:53:35] 2025-07-21 16:52:58,817 | INFO     | intersect: 164401325.01558298
[2025-07-21 12:53:35] 2025-07-21 16:52:58,819 | INFO     | chi2: 4.953126929470593
[2025-07-21 12:53:35] 2025-07-21 16:52:58,821 | INFO     | sum of square deviations: 153459862285.98972
[2025-07-21 12:53:35] 2025-07-21 16:52:58,852 | INFO     | sum of deviations: 60274124202.676544
[2025-07-21 12:53:35] 2025-07-21 16:52:58,852 | INFO     | mean x: 1753092312.7003794
[2025-07-21 12:53:35] 2025-07-21 16:52:58,852 | INFO     | mean y: 2072374.412136536
[2025-07-21 12:53:35] 2025-07-21 16:52:58,852 | INFO     | -- intersect: -686486198.6272389
[2025-07-21 12:53:35] 2025-07-21 16:52:58,853 | INFO     | intersect: -686486198.6272389
[2025-07-21 12:53:35] 2025-07-21 16:52:58,854 | INFO     | chi2: 4.13756767454532
[2025-07-21 12:53:35] 2025-07-21 16:52:58,855 | INFO     | current chi2=4.13756767454532 (change=16.46554321216321 %)
[2025-07-21 12:53:35] 2025-07-21 16:52:58,855 | INFO     | right removable region: 790
[2025-07-21 12:53:35] 2025-07-21 16:52:58,857 | INFO     | sum of square deviations: 153459524345.9899
[2025-07-21 12:53:35] 2025-07-21 16:52:58,891 | INFO     | sum of deviations: -177342290513.2858
[2025-07-21 12:53:35] 2025-07-21 16:52:58,892 | INFO     | mean x: 1753092617.7003794
[2025-07-21 12:53:35] 2025-07-21 16:52:58,892 | INFO     | mean y: 2076962.2857142857
[2025-07-21 12:53:35] 2025-07-21 16:52:58,892 | INFO     | -- intersect: 2028001789.2385716
[2025-07-21 12:53:35] 2025-07-21 16:52:58,892 | INFO     | intersect: 2028001789.2385716
[2025-07-21 12:53:35] 2025-07-21 16:52:58,895 | INFO     | chi2: 2.5731626128198837
[2025-07-21 12:53:35] 2025-07-21 16:52:58,896 | INFO     | current chi2=2.5731626128198837 (change=48.04973404760067 %)
[2025-07-21 12:53:35] 2025-07-21 16:52:58,898 | INFO     | sum of square deviations: 150567563235.43018
[2025-07-21 12:53:35] 2025-07-21 16:52:58,933 | INFO     | sum of deviations: -259015141145.5496
[2025-07-21 12:53:35] 2025-07-21 16:52:58,934 | INFO     | mean x: 1753092770.2035623
[2025-07-21 12:53:35] 2025-07-21 16:52:58,934 | INFO     | mean y: 2081267.0534351144
[2025-07-21 12:53:35] 2025-07-21 16:52:58,935 | INFO     | -- intersect: 3017854130.465685
[2025-07-21 12:53:35] 2025-07-21 16:52:58,935 | INFO     | intersect: 3017854130.465685
[2025-07-21 12:53:35] 2025-07-21 16:52:58,938 | INFO     | chi2: 1.9889119113617473
[2025-07-21 12:53:35] 2025-07-21 16:52:58,938 | INFO     | current chi2=1.9889119113617473 (change=22.705549138142743 %)
[2025-07-21 12:53:35] 2025-07-21 16:52:58,938 | INFO     | left removable region: 20
[2025-07-21 12:53:35] 2025-07-21 16:52:58,941 | INFO     | sum of square deviations: 141558210743.6427
[2025-07-21 12:53:35] 2025-07-21 16:52:58,974 | INFO     | sum of deviations: -235247803670.0714
[2025-07-21 12:53:35] 2025-07-21 16:52:58,975 | INFO     | mean x: 1753092892.2142856
[2025-07-21 12:53:35] 2025-07-21 16:52:58,976 | INFO     | mean y: 2089013.7155844155
[2025-07-21 12:53:35] 2025-07-21 16:52:58,976 | INFO     | -- intersect: 2915457658.0105257
[2025-07-21 12:53:35] 2025-07-21 16:52:58,976 | INFO     | intersect: 2915457658.0105257
[2025-07-21 12:53:35] 2025-07-21 16:52:58,979 | INFO     | chi2: 0.917296907177353
[2025-07-21 12:53:35] 2025-07-21 16:52:58,979 | INFO     | -- intersect: 2915457658.0105257
[2025-07-21 12:53:35] 2025-07-21 16:52:58,980 | INFO     | current memory leak: -1.66 B/s (using 770 data points, chi2=0.92)
[2025-07-21 12:53:35] 2025-07-21 16:52:58,982 | INFO     | could have reported an average CPU frequency of 1003 MHz (30 samples)
[2025-07-21 12:53:35] 2025-07-21 16:52:58,983 | INFO     | ..............................
[2025-07-21 12:53:35] 2025-07-21 16:52:58,983 | INFO     | . Timing measurements:
[2025-07-21 12:53:35] 2025-07-21 16:52:58,983 | INFO     | . get job = 0 s
[2025-07-21 12:53:35] 2025-07-21 16:52:58,984 | INFO     | . initial setup = 4 s
[2025-07-21 12:53:35] 2025-07-21 16:52:58,984 | INFO     | . payload setup = 28 s
[2025-07-21 12:53:35] 2025-07-21 16:52:58,984 | INFO     | . stage-in = 0 s
[2025-07-21 12:53:35] 2025-07-21 16:52:58,984 | INFO     | . payload execution = 48538 s
[2025-07-21 12:53:35] 2025-07-21 16:52:58,984 | INFO     | . stage-out = 6 s
[2025-07-21 12:53:35] 2025-07-21 16:52:58,985 | INFO     | . log creation = 0 s
[2025-07-21 12:53:35] 2025-07-21 16:52:58,985 | INFO     | ..............................
[2025-07-21 12:53:35] 2025-07-21 16:52:59,262 | INFO     | 
[2025-07-21 12:53:35] 2025-07-21 16:52:59,263 | INFO     | job summary report
[2025-07-21 12:53:35] 2025-07-21 16:52:59,263 | INFO     | --------------------------------------------------
[2025-07-21 12:53:35] 2025-07-21 16:52:59,264 | INFO     | PanDA job id: 6740865790
[2025-07-21 12:53:35] 2025-07-21 16:52:59,264 | INFO     | task id: 45668757
[2025-07-21 12:53:35] 2025-07-21 16:52:59,264 | INFO     | errors: (none)
[2025-07-21 12:53:35] 2025-07-21 16:52:59,264 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-21 12:53:35] 2025-07-21 16:52:59,264 | INFO     | pilot state: finished 
[2025-07-21 12:53:35] 2025-07-21 16:52:59,265 | INFO     | transexitcode: 0
[2025-07-21 12:53:35] 2025-07-21 16:52:59,265 | INFO     | exeerrorcode: 0
[2025-07-21 12:53:35] 2025-07-21 16:52:59,265 | INFO     | exeerrordiag: 
[2025-07-21 12:53:35] 2025-07-21 16:52:59,265 | INFO     | exitcode: 0
[2025-07-21 12:53:35] 2025-07-21 16:52:59,265 | INFO     | exitmsg: OK
[2025-07-21 12:53:35] 2025-07-21 16:52:59,265 | INFO     | cpuconsumptiontime: 166670 s
[2025-07-21 12:53:35] 2025-07-21 16:52:59,266 | INFO     | nevents: 400
[2025-07-21 12:53:35] 2025-07-21 16:52:59,266 | INFO     | neventsw: 0
[2025-07-21 12:53:35] 2025-07-21 16:52:59,266 | INFO     | pid: 1413092
[2025-07-21 12:53:35] 2025-07-21 16:52:59,266 | INFO     | pgrp: 1413092
[2025-07-21 12:53:35] 2025-07-21 16:52:59,266 | INFO     | corecount: 8
[2025-07-21 12:53:35] 2025-07-21 16:52:59,267 | INFO     | event service: False
[2025-07-21 12:53:35] 2025-07-21 16:52:59,267 | INFO     | sizes: {0: 2396607, 1: 2397292, 2: 2397491, 3: 2397491, 14: 2397519, 16: 2397809, 25: 2397965, 48571: 2443034, 48572: 2443033, 48579: 2452087, 48580: 2452143, 4860
[2025-07-21 12:53:35] 2025-07-21 16:52:59,267 | INFO     | --------------------------------------------------
[2025-07-21 12:53:35] 2025-07-21 16:52:59,267 | INFO     | 
[2025-07-21 12:53:35] 2025-07-21 16:52:59,268 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-21 12:53:35] 2025-07-21 16:52:59,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,318 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,322 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,322 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-21 12:53:35] 2025-07-21 16:52:59,322 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,322 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-21 12:53:35] 2025-07-21 16:52:59,323 | INFO     | job 6740865790 has completed (purged errors)
[2025-07-21 12:53:35] 2025-07-21 16:52:59,323 | INFO     | overall cleanup function is called
[2025-07-21 12:53:35] 2025-07-21 16:53:00,342 | INFO     | --- collectZombieJob: --- 10, [1413092]
[2025-07-21 12:53:35] 2025-07-21 16:53:00,343 | INFO     | zombie collector waiting for pid 1413092
[2025-07-21 12:53:35] 2025-07-21 16:53:00,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-21 12:53:35] 2025-07-21 16:53:00,347 | INFO     | collected zombie processes
[2025-07-21 12:53:35] 2025-07-21 16:53:00,347 | INFO     | will attempt to kill all subprocesses of pid=1413092
[2025-07-21 12:53:35] 2025-07-21 16:53:01,512 | INFO     | process IDs to be killed: [1413092] (in reverse order)
[2025-07-21 12:53:35] 2025-07-21 16:53:01,890 | WARNING  | found no corresponding commands to process id(s)
[2025-07-21 12:53:35] 2025-07-21 16:53:01,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-21 12:53:35] 2025-07-21 16:53:01,935 | INFO     | did not find any defunct processes belonging to 1413092
[2025-07-21 12:53:35] 2025-07-21 16:53:01,974 | INFO     | did not find any defunct processes belonging to 1413092
[2025-07-21 12:53:35] 2025-07-21 16:53:01,975 | INFO     | ready for new job
[2025-07-21 12:53:35] 2025-07-21 16:53:01,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-21 12:53:35] 2025-07-21 16:53:01,982 | INFO     | ***************************************
[2025-07-21 12:53:35] 2025-07-21 16:53:01,983 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-21 12:53:35] 2025-07-21 16:53:01,983 | INFO     | ***************************************
[2025-07-21 12:53:35] 2025-07-21 16:53:01,983 | INFO     | 
[2025-07-21 12:53:35] 2025-07-21 16:53:02,016 | INFO     | architecture information:
[2025-07-21 12:53:35] 2025-07-21 16:53:02,017 | INFO     | executing command: cat /etc/os-release
[2025-07-21 12:53:35] 2025-07-21 16:53:02,068 | INFO     | cat /etc/os-release:
[2025-07-21 12:53:35] NAME="CentOS Linux"
[2025-07-21 12:53:35] VERSION="7 (Core)"
[2025-07-21 12:53:35] ID="centos"
[2025-07-21 12:53:35] ID_LIKE="rhel fedora"
[2025-07-21 12:53:35] VERSION_ID="7"
[2025-07-21 12:53:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-21 12:53:35] ANSI_COLOR="0;31"
[2025-07-21 12:53:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-21 12:53:35] HOME_URL="https://www.centos.org/"
[2025-07-21 12:53:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-21 12:53:35] 
[2025-07-21 12:53:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-21 12:53:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-21 12:53:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-21 12:53:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-21 12:53:35] 
[2025-07-21 12:53:35] 2025-07-21 16:53:02,069 | INFO     | ***************************************
[2025-07-21 12:53:35] 2025-07-21 16:53:02,574 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-21 12:53:35] 2025-07-21 16:53:02,679 | INFO     | sufficient remaining disk space (96013910016 B)
[2025-07-21 12:53:35] 2025-07-21 16:53:02,682 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-21 12:53:35] 2025-07-21 16:53:02,684 | INFO     | current server update state: UPDATING_FINAL
[2025-07-21 12:53:35] 2025-07-21 16:53:02,684 | INFO     | update_server=False
[2025-07-21 12:53:35] 2025-07-21 16:53:02,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-21 12:53:35] 2025-07-21 16:53:02,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-21 12:53:35] 2025-07-21 16:53:03,168 | INFO     | all data control threads have been joined
[2025-07-21 12:53:35] 2025-07-21 16:53:03,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-21 12:53:35] 2025-07-21 16:53:03,612 | INFO     | aborting loop
[2025-07-21 12:53:35] 2025-07-21 16:53:03,693 | INFO     | [job] retrieve thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:03,751 | INFO     | all job control threads have been joined
[2025-07-21 12:53:35] 2025-07-21 16:53:03,790 | INFO     | [job] create_data_payload thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:03,807 | INFO     | [payload] execute_payloads thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:03,844 | INFO     | [payload] validate_pre thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:03,915 | INFO     | all payload control threads have been joined
[2025-07-21 12:53:35] 2025-07-21 16:53:03,922 | INFO     | [payload] validate_post thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:04,176 | INFO     | [data] control thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:04,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-21 12:53:35] 2025-07-21 16:53:04,618 | INFO     | [job] job monitor thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:04,694 | INFO     | [data] copytool_out thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:04,757 | INFO     | [job] control thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:04,819 | INFO     | [job] validate thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:04,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:04,890 | INFO     | [payload] failed_post thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:04,921 | INFO     | [payload] control thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:05,138 | INFO     | [data] copytool_in thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:05,287 | INFO     | [job] queue monitor thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:05,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-21 12:53:35] 2025-07-21 16:53:09,879 | INFO     | [data] queue_monitor thread has finished
[2025-07-21 12:53:35] 2025-07-21 16:53:10,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890553354048)>', '<ExcThread(monitor, started 139889819506432)>']
[2025-07-21 12:53:35] 2025-07-21 16:53:16,006 | INFO     | all workflow threads have been joined
[2025-07-21 12:53:35] 2025-07-21 16:53:16,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-21 12:53:35] 2025-07-21 16:53:16,009 | INFO     | traces error code: 0
[2025-07-21 12:53:35] 2025-07-21 16:53:16,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-21 12:53:35] 2025-07-21 16:53:33,343 | INFO     | PID=1382374 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-21 12:53:35] 2025-07-21 16:53:33,347 | INFO     | .. there are 13 such processes running
[2025-07-21 12:53:35] 2025-07-21 16:53:33,349 | INFO     | found 0 job(s) in 20 queues
[2025-07-21 12:53:35] 2025-07-21 16:53:33,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-21 12:53:35] 2025-07-21 16:53:33,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-21 12:53:35] 2025-07-21 16:53:33,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-21 12:53:35] 2025-07-21 16:53:33,351 | INFO     | [monitor] control thread has ended
[2025-07-21 12:53:35] 2025-07-21 16:53:33,795 [wrapper] ==== pilot stdout END ====
[2025-07-21 12:53:35] 2025-07-21 16:53:33,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-21 12:53:35] 2025-07-21 16:53:33,854 [wrapper] pilotpid: 1382374
[2025-07-21 12:53:35] 2025-07-21 16:53:33,906 [wrapper] Pilot exit status: 0
[2025-07-21 12:53:35] 2025-07-21 16:53:34,038 [wrapper] pandaids: 6740865790
[2025-07-21 12:53:35] 2025-07-21 16:53:34,671 [wrapper] cleanup supervisor_pilot 2834745 1382375
[2025-07-21 12:53:35] 2025-07-21 16:53:34,687 [wrapper] Test setup, not cleaning
[2025-07-21 12:53:35] 2025-07-21 16:53:34,706 [wrapper] apfmon messages muted
[2025-07-21 12:53:35] 2025-07-21 16:53:34,724 [wrapper] ==== wrapper stdout END ====
[2025-07-21 12:53:35] 2025-07-21 16:53:34,739 [wrapper] ==== wrapper stderr END ====
[2025-07-21 12:53:35]  *** Error codes and diagnostics ***
[2025-07-21 12:53:35]     "exeErrorCode": 0,
[2025-07-21 12:53:35]     "exeErrorDiag": "",
[2025-07-21 12:53:35]     "pilotErrorCode": 0,
[2025-07-21 12:53:35]     "pilotErrorDiag": "",
[2025-07-21 12:53:35]  *** Listing of results directory ***
[2025-07-21 12:53:35] total 473540
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas    530466 Jul 20 23:16 pilot3.tar.gz
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas      5112 Jul 20 23:19 queuedata.json
[2025-07-21 12:53:35] -rwx------. 1 boincer umatlas     36292 Jul 20 23:19 runpilot2-wrapper.sh
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas       100 Jul 20 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-21 12:53:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 20 23:21 run_atlas
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas       105 Jul 20 23:21 job.xml
[2025-07-21 12:53:35] -rw-r--r--. 2 boincer umatlas 277659501 Jul 20 23:21 EVNT.45668754._000004.pool.root.1
[2025-07-21 12:53:35] -rw-r--r--. 2 boincer umatlas    542874 Jul 20 23:21 input.tar.gz
[2025-07-21 12:53:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 20 23:21 start_atlas.sh
[2025-07-21 12:53:35] drwxrwx--x. 2 boincer umatlas      4096 Jul 20 23:21 shared
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas         0 Jul 20 23:21 boinc_lockfile
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas      2535 Jul 20 23:21 pandaJob.out
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas    978406 Jul 20 23:22 agis_schedconf.cvmfs.json
[2025-07-21 12:53:35] drwx------. 4 boincer umatlas      4096 Jul 20 23:22 pilot3
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas      6858 Jul 21 12:46 init_data.xml
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas 195709779 Jul 21 12:50 HITS.45668757._000086.pool.root.1
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas       532 Jul 21 12:51 boinc_task_state.xml
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas      1043 Jul 21 12:52 memory_monitor_summary.json
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas   1593055 Jul 21 12:52 agis_ddmendpoints.agis.ALL.json
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas    646966 Jul 21 12:52 log.45668757._000086.job.log.tgz.1
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas      7827 Jul 21 12:52 heartbeat.json
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas      8192 Jul 21 12:53 boinc_mmap_file
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas        29 Jul 21 12:53 wrapper_checkpoint.txt
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas        95 Jul 21 12:53 pilot_heartbeat.json
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas       823 Jul 21 12:53 pilotlog.txt
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas   3188822 Jul 21 12:53 log.45668757._000086.job.log.1
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas       357 Jul 21 12:53 output.list
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas       620 Jul 21 12:53 runtime_log
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas   3850240 Jul 21 12:53 result.tar.gz
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas      8671 Jul 21 12:53 runtime_log.err
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas       662 Jul 21 12:53 mBwKDmJFwx7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjkFLDm6P4wYn.diag
[2025-07-21 12:53:35] -rw-r--r--. 1 boincer umatlas     21358 Jul 21 12:53 stderr.txt
[2025-07-21 12:53:35] HITS file was successfully produced:
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas 195709779 Jul 21 12:50 shared/HITS.pool.root.1
[2025-07-21 12:53:35]  *** Contents of shared directory: ***
[2025-07-21 12:53:35] total 466592
[2025-07-21 12:53:35] -rw-r--r--. 2 boincer umatlas 277659501 Jul 20 23:21 ATLAS.root_0
[2025-07-21 12:53:35] -rw-r--r--. 2 boincer umatlas    542874 Jul 20 23:21 input.tar.gz
[2025-07-21 12:53:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 20 23:21 start_atlas.sh
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas 195709779 Jul 21 12:50 HITS.pool.root.1
[2025-07-21 12:53:35] -rw-------. 1 boincer umatlas   3850240 Jul 21 12:53 result.tar.gz
12:53:36 (1373794): run_atlas exited; CPU time 171162.539089
12:53:36 (1373794): called boinc_finish(0)

</stderr_txt>
]]>

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