Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:47 (13102): wrapper (7.7.26015): starting
13:48:47 (13102): wrapper: running run_atlas (--nthreads 8)
[2025-07-20 13:48:47] Arguments: --nthreads 8
[2025-07-20 13:48:47] Threads: 8
[2025-07-20 13:48:47] Checking for CVMFS
[2025-07-20 13:48:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-20 13:48:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-20 13:48:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-20 13:48:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-20 13:48:49] 2.11.2.0 12723 99521 140256 148542 1 181 14590189 25165824 2169 130560 0 56325245 99.837 48469752 3873 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-20 13:48:49] CVMFS is ok
[2025-07-20 13:48:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-20 13:48:49] Checking for apptainer binary...
[2025-07-20 13:48:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-20 13:48:49] Running /usr/bin/apptainer --version
[2025-07-20 13:48:49] apptainer version 1.3.2-1.el7
[2025-07-20 13:48:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-20 15:43:42] cg-vwn445.simple-grid.lan
[2025-07-20 15:43:42] apptainer works
[2025-07-20 15:43:42] Set ATHENA_PROC_NUMBER=8
[2025-07-20 15:43:42] Set ATHENA_CORE_NUMBER=8
[2025-07-20 15:43:42] Starting ATLAS job with PandaID=6740161436
[2025-07-20 15:43:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-20 20:54:12]  *** The last 200 lines of the pilot log: ***
[2025-07-20 20:54:12] 2025-07-20 18:35:17,933 | INFO     | monitor loop #1211: job 0:6740161436 is in state 'finished'
[2025-07-20 20:54:12] 2025-07-20 18:35:17,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,431 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-20 20:54:12] 2025-07-20 18:35:18,432 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-20 20:54:12] 2025-07-20 18:35:18,433 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6740161436/memory_monitor_summary.json (trf name=prmon)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,434 | INFO     | extracted standard info from prmon json
[2025-07-20 20:54:12] 2025-07-20 18:35:18,434 | INFO     | extracted standard memory fields from prmon json
[2025-07-20 20:54:12] 2025-07-20 18:35:18,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-20 20:54:12] 2025-07-20 18:35:18,434 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-20 20:54:12] 2025-07-20 18:35:18,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-20 20:54:12] 2025-07-20 18:35:18,439 | INFO     | fitting pss+swap vs Time
[2025-07-20 20:54:12] 2025-07-20 18:35:18,440 | INFO     | sum of square deviations: 6953769450.5
[2025-07-20 20:54:12] 2025-07-20 18:35:18,443 | INFO     | sum of deviations: 65420507984.0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,443 | INFO     | mean x: 1753027801.5
[2025-07-20 20:54:12] 2025-07-20 18:35:18,443 | INFO     | mean y: 2478532.780141844
[2025-07-20 20:54:12] 2025-07-20 18:35:18,443 | INFO     | -- intersect: -16489867108.037521
[2025-07-20 20:54:12] 2025-07-20 18:35:18,443 | INFO     | intersect: -16489867108.037521
[2025-07-20 20:54:12] 2025-07-20 18:35:18,444 | INFO     | chi2: 3.187578645198639
[2025-07-20 20:54:12] 2025-07-20 18:35:18,444 | INFO     | sum of square deviations: 6590404498.0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,446 | INFO     | sum of deviations: 82787626017.0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,447 | INFO     | mean x: 1753027649.0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,447 | INFO     | mean y: 2485707.9458483756
[2025-07-20 20:54:12] 2025-07-20 18:35:18,447 | INFO     | -- intersect: -22018772235.616688
[2025-07-20 20:54:12] 2025-07-20 18:35:18,447 | INFO     | intersect: -22018772235.616688
[2025-07-20 20:54:12] 2025-07-20 18:35:18,447 | INFO     | chi2: 2.4207951572748763
[2025-07-20 20:54:12] 2025-07-20 18:35:18,447 | INFO     | current chi2=2.4207951572748763 (change=24.055359044356365 %)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,447 | INFO     | right removable region: 276
[2025-07-20 20:54:12] 2025-07-20 18:35:18,448 | INFO     | sum of square deviations: 6590404498.0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,450 | INFO     | sum of deviations: -305389362.9999924
[2025-07-20 20:54:12] 2025-07-20 18:35:18,450 | INFO     | mean x: 1753027954.0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,450 | INFO     | mean y: 2506000.5956678702
[2025-07-20 20:54:12] 2025-07-20 18:35:18,450 | INFO     | -- intersect: 83738660.95144804
[2025-07-20 20:54:12] 2025-07-20 18:35:18,451 | INFO     | intersect: 83738660.95144804
[2025-07-20 20:54:12] 2025-07-20 18:35:18,451 | INFO     | chi2: 0.8931458400771578
[2025-07-20 20:54:12] 2025-07-20 18:35:18,451 | INFO     | current chi2=0.8931458400771578 (change=71.98042967747703 %)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,452 | INFO     | sum of square deviations: 6239923508.0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,454 | INFO     | sum of deviations: -11287267065.000004
[2025-07-20 20:54:12] 2025-07-20 18:35:18,454 | INFO     | mean x: 1753028106.5
[2025-07-20 20:54:12] 2025-07-20 18:35:18,454 | INFO     | mean y: 2510761.1029411764
[2025-07-20 20:54:12] 2025-07-20 18:35:18,454 | INFO     | -- intersect: 3173526621.337228
[2025-07-20 20:54:12] 2025-07-20 18:35:18,454 | INFO     | intersect: 3173526621.337228
[2025-07-20 20:54:12] 2025-07-20 18:35:18,455 | INFO     | chi2: 0.8327837598252404
[2025-07-20 20:54:12] 2025-07-20 18:35:18,455 | INFO     | current chi2=0.8327837598252404 (change=6.758367731601678 %)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,455 | INFO     | left removable region: 20
[2025-07-20 20:54:12] 2025-07-20 18:35:18,455 | INFO     | sum of square deviations: 5202255680.0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,457 | INFO     | sum of deviations: 11061715935.5
[2025-07-20 20:54:12] 2025-07-20 18:35:18,457 | INFO     | mean x: 1753028228.5
[2025-07-20 20:54:12] 2025-07-20 18:35:18,457 | INFO     | mean y: 2516623.28515625
[2025-07-20 20:54:12] 2025-07-20 18:35:18,458 | INFO     | -- intersect: -3725001108.1347237
[2025-07-20 20:54:12] 2025-07-20 18:35:18,458 | INFO     | intersect: -3725001108.1347237
[2025-07-20 20:54:12] 2025-07-20 18:35:18,458 | INFO     | chi2: 0.0021650538643119576
[2025-07-20 20:54:12] 2025-07-20 18:35:18,458 | INFO     | -- intersect: -3725001108.1347237
[2025-07-20 20:54:12] 2025-07-20 18:35:18,458 | INFO     | current memory leak: 2.13 B/s (using 256 data points, chi2=0.00)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | ..............................
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | . Timing measurements:
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | . get job = 0 s
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | . initial setup = 2 s
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | . payload setup = 38 s
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | . stage-in = 0 s
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | . payload execution = 17197 s
[2025-07-20 20:54:12] 2025-07-20 18:35:18,459 | INFO     | . stage-out = 3 s
[2025-07-20 20:54:12] 2025-07-20 18:35:18,460 | INFO     | . log creation = 1 s
[2025-07-20 20:54:12] 2025-07-20 18:35:18,460 | INFO     | ..............................
[2025-07-20 20:54:12] 2025-07-20 18:35:18,572 | INFO     | 
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | job summary report
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | --------------------------------------------------
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | PanDA job id: 6740161436
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | task id: 45668889
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | errors: (none)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | pilot state: finished 
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | transexitcode: 0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | exeerrorcode: 0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | exeerrordiag: 
[2025-07-20 20:54:12] 2025-07-20 18:35:18,573 | INFO     | exitcode: 0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | exitmsg: OK
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | cpuconsumptiontime: 66554 s
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | nevents: 400
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | neventsw: 0
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | pid: 25295
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | pgrp: 25295
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | corecount: 8
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | event service: False
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | sizes: {0: 2397431, 10: 2397693, 11: 2397721, 17239: 2429099, 17240: 2429098, 17244: 2438366, 17341: 2438504}
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | --------------------------------------------------
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | 
[2025-07-20 20:54:12] 2025-07-20 18:35:18,574 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-07-20 20:54:12] 2025-07-20 18:35:18,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-20 20:54:12] 2025-07-20 18:35:18,742 | INFO     | job 6740161436 has completed (purged errors)
[2025-07-20 20:54:12] 2025-07-20 18:35:18,742 | INFO     | overall cleanup function is called
[2025-07-20 20:54:12] 2025-07-20 18:35:19,750 | INFO     | --- collectZombieJob: --- 10, [25295]
[2025-07-20 20:54:12] 2025-07-20 18:35:19,750 | INFO     | zombie collector waiting for pid 25295
[2025-07-20 20:54:12] 2025-07-20 18:35:19,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-20 20:54:12] 2025-07-20 18:35:19,750 | INFO     | collected zombie processes
[2025-07-20 20:54:12] 2025-07-20 18:35:19,750 | INFO     | will attempt to kill all subprocesses of pid=25295
[2025-07-20 20:54:12] 2025-07-20 18:35:19,866 | INFO     | process IDs to be killed: [25295] (in reverse order)
[2025-07-20 20:54:12] 2025-07-20 18:35:20,535 | WARNING  | found no corresponding commands to process id(s)
[2025-07-20 20:54:12] 2025-07-20 18:35:20,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-20 20:54:12] 2025-07-20 18:35:20,538 | INFO     | did not find any defunct processes belonging to 25295
[2025-07-20 20:54:12] 2025-07-20 18:35:20,540 | INFO     | did not find any defunct processes belonging to 25295
[2025-07-20 20:54:12] 2025-07-20 18:35:20,540 | INFO     | ready for new job
[2025-07-20 20:54:12] 2025-07-20 18:35:20,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-20 20:54:12] 2025-07-20 18:35:20,542 | INFO     | ***************************************
[2025-07-20 20:54:12] 2025-07-20 18:35:20,542 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-20 20:54:12] 2025-07-20 18:35:20,542 | INFO     | ***************************************
[2025-07-20 20:54:12] 2025-07-20 18:35:20,542 | INFO     | 
[2025-07-20 20:54:12] 2025-07-20 18:35:20,543 | INFO     | pilot is running in a VM
[2025-07-20 20:54:12] 2025-07-20 18:35:20,543 | INFO     | architecture information:
[2025-07-20 20:54:12] 2025-07-20 18:35:20,562 | INFO     | executing command: cat /etc/os-release
[2025-07-20 20:54:12] 2025-07-20 18:35:20,852 | INFO     | cat /etc/os-release:
[2025-07-20 20:54:12] NAME="CentOS Linux"
[2025-07-20 20:54:12] VERSION="7 (Core)"
[2025-07-20 20:54:12] ID="centos"
[2025-07-20 20:54:12] ID_LIKE="rhel fedora"
[2025-07-20 20:54:12] VERSION_ID="7"
[2025-07-20 20:54:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-20 20:54:12] ANSI_COLOR="0;31"
[2025-07-20 20:54:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-20 20:54:12] HOME_URL="https://www.centos.org/"
[2025-07-20 20:54:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-20 20:54:12] 
[2025-07-20 20:54:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-20 20:54:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-20 20:54:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-20 20:54:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-20 20:54:12] 
[2025-07-20 20:54:12] 2025-07-20 18:35:20,853 | INFO     | ***************************************
[2025-07-20 20:54:12] 2025-07-20 18:35:21,356 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-07-20 20:54:12] 2025-07-20 18:35:21,583 | INFO     | sufficient remaining disk space (497420337152 B)
[2025-07-20 20:54:12] 2025-07-20 18:35:21,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-20 20:54:12] 2025-07-20 18:35:21,583 | INFO     | current server update state: UPDATING_FINAL
[2025-07-20 20:54:12] 2025-07-20 18:35:21,583 | INFO     | update_server=False
[2025-07-20 20:54:12] 2025-07-20 18:35:21,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-20 20:54:12] 2025-07-20 18:35:21,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-20 20:54:12] 2025-07-20 18:35:21,595 | INFO     | aborting loop
[2025-07-20 20:54:12] 2025-07-20 18:35:21,614 | INFO     | all payload control threads have been joined
[2025-07-20 20:54:12] 2025-07-20 18:35:22,051 | INFO     | all data control threads have been joined
[2025-07-20 20:54:12] 2025-07-20 18:35:22,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-20 20:54:12] 2025-07-20 18:35:22,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-20 20:54:12] 2025-07-20 18:35:22,589 | INFO     | [job] retrieve thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:22,601 | INFO     | [job] job monitor thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:22,620 | INFO     | [payload] control thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:22,662 | INFO     | all job control threads have been joined
[2025-07-20 20:54:12] 2025-07-20 18:35:22,688 | INFO     | [payload] validate_post thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:22,990 | INFO     | [payload] execute_payloads thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:23,057 | INFO     | [data] control thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:23,126 | INFO     | [job] create_data_payload thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:23,258 | INFO     | [payload] failed_post thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:23,378 | INFO     | [data] copytool_in thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:23,446 | INFO     | [payload] validate_pre thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:23,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-20 20:54:12] 2025-07-20 18:35:23,598 | INFO     | [job] validate thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:23,668 | INFO     | [job] control thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:23,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:24,295 | INFO     | [data] copytool_out thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:24,594 | INFO     | [job] queue monitor thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:26,380 | INFO     | [data] queue_monitor thread has finished
[2025-07-20 20:54:12] 2025-07-20 18:35:27,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140693546805056)>', '<ExcThread(monitor, started 140693104215808)>']
[2025-07-20 20:54:12] 2025-07-20 18:35:32,454 | INFO     | all workflow threads have been joined
[2025-07-20 20:54:12] 2025-07-20 18:35:32,454 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-20 20:54:12] 2025-07-20 18:35:32,454 | INFO     | traces error code: 0
[2025-07-20 20:54:12] 2025-07-20 18:35:32,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-20 20:54:12] 2025-07-20 18:35:50,691 | INFO     | PID=18683 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-20 20:54:12] 2025-07-20 18:35:50,691 | INFO     | .. there are 9 such processes running
[2025-07-20 20:54:12] 2025-07-20 18:35:50,692 | INFO     | found 0 job(s) in 20 queues
[2025-07-20 20:54:12] 2025-07-20 18:35:50,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-20 20:54:12] 2025-07-20 18:35:50,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-20 20:54:12] 2025-07-20 18:35:50,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-20 20:54:12] 2025-07-20 18:35:50,692 | CRITICAL | thread 'MainThread' is not alive
[2025-07-20 20:54:12] 2025-07-20 18:35:50,692 | INFO     | [monitor] control thread has ended
[2025-07-20 20:54:12] 2025-07-20 18:35:50,897 [wrapper] ==== pilot stdout END ====
[2025-07-20 20:54:12] 2025-07-20 18:35:50,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-20 20:54:12] 2025-07-20 18:35:51,016 [wrapper] pilotpid: 18683
[2025-07-20 20:54:12] 2025-07-20 18:35:51,124 [wrapper] Pilot exit status: 0
[2025-07-20 20:54:12] 2025-07-20 18:35:51,549 [wrapper] pandaids: 6740161436
[2025-07-20 20:54:12] 2025-07-20 18:35:52,399 [wrapper] cleanup supervisor_pilot  5318 18684
[2025-07-20 20:54:12] 2025-07-20 18:35:52,497 [wrapper] Test setup, not cleaning
[2025-07-20 20:54:12] 2025-07-20 18:35:52,548 [wrapper] apfmon messages muted
[2025-07-20 20:54:12] 2025-07-20 18:35:52,601 [wrapper] ==== wrapper stdout END ====
[2025-07-20 20:54:12] 2025-07-20 18:35:52,717 [wrapper] ==== wrapper stderr END ====
[2025-07-20 20:54:12]  *** Error codes and diagnostics ***
[2025-07-20 20:54:12]     "exeErrorCode": 0,
[2025-07-20 20:54:12]     "exeErrorDiag": "",
[2025-07-20 20:54:12]     "pilotErrorCode": 0,
[2025-07-20 20:54:12]     "pilotErrorDiag": "",
[2025-07-20 20:54:12]  *** Listing of results directory ***
[2025-07-20 20:54:12] total 522692
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc    530466 Jul 20 13:31 pilot3.tar.gz
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc      5112 Jul 20 13:34 queuedata.json
[2025-07-20 20:54:12] -rwx------. 1 boinc boinc     36292 Jul 20 13:35 runpilot2-wrapper.sh
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc       100 Jul 20 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-20 20:54:12] -rwxr-xr-x. 1 boinc boinc      7986 Jul 20 13:48 run_atlas
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc       105 Jul 20 13:48 job.xml
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc      6392 Jul 20 13:48 init_data.xml
[2025-07-20 20:54:12] -rw-r--r--. 2 boinc boinc 303818692 Jul 20 13:48 EVNT.45668886._000013.pool.root.1
[2025-07-20 20:54:12] -rw-r--r--. 2 boinc boinc     15095 Jul 20 13:48 start_atlas.sh
[2025-07-20 20:54:12] drwxrwx--x. 2 boinc boinc        68 Jul 20 13:48 shared
[2025-07-20 20:54:12] -rw-r--r--. 2 boinc boinc    542890 Jul 20 13:48 input.tar.gz
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc         0 Jul 20 13:48 boinc_lockfile
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc      2537 Jul 20 15:43 pandaJob.out
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc    978438 Jul 20 15:45 agis_schedconf.cvmfs.json
[2025-07-20 20:54:12] drwx------. 4 boinc boinc      4096 Jul 20 15:46 pilot3
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc 223749165 Jul 20 20:32 HITS.45668889._000313.pool.root.1
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc       531 Jul 20 20:32 boinc_task_state.xml
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc      1017 Jul 20 20:33 memory_monitor_summary.json
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc   1593055 Jul 20 20:33 agis_ddmendpoints.agis.ALL.json
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc    409892 Jul 20 20:33 log.45668889._000313.job.log.tgz.1
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc      7769 Jul 20 20:35 heartbeat.json
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc        95 Jul 20 20:35 pilot_heartbeat.json
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc       890 Jul 20 20:35 pilotlog.txt
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc   1493424 Jul 20 20:35 log.45668889._000313.job.log.1
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc       357 Jul 20 20:35 output.list
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc       620 Jul 20 20:35 runtime_log
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc   1925120 Jul 20 20:35 result.tar.gz
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc       657 Jul 20 20:35 sMqNDmaVhx7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIlsKDm89K69m.diag
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc      8674 Jul 20 20:35 runtime_log.err
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc      8192 Jul 20 20:54 boinc_mmap_file
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc        28 Jul 20 20:54 wrapper_checkpoint.txt
[2025-07-20 20:54:12] -rw-r--r--. 1 boinc boinc     20760 Jul 20 20:54 stderr.txt
[2025-07-20 20:54:12] HITS file was successfully produced:
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc 223749165 Jul 20 20:32 shared/HITS.pool.root.1
[2025-07-20 20:54:12]  *** Contents of shared directory: ***
[2025-07-20 20:54:12] total 517636
[2025-07-20 20:54:12] -rw-r--r--. 2 boinc boinc 303818692 Jul 20 13:48 ATLAS.root_0
[2025-07-20 20:54:12] -rw-r--r--. 2 boinc boinc     15095 Jul 20 13:48 start_atlas.sh
[2025-07-20 20:54:12] -rw-r--r--. 2 boinc boinc    542890 Jul 20 13:48 input.tar.gz
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc 223749165 Jul 20 20:32 HITS.pool.root.1
[2025-07-20 20:54:12] -rw-------. 1 boinc boinc   1925120 Jul 20 20:35 result.tar.gz
20:54:14 (13102): run_atlas exited; CPU time 66750.457828
20:54:14 (13102): called boinc_finish(0)

</stderr_txt>
]]>

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