Name 4uOLDmIUhx7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfbFLDmiFpPGm_0
Workunit 233696125
Created 20 Jul 2025, 11:35:22 UTC
Sent 20 Jul 2025, 11:35:29 UTC
Report deadline 28 Jul 2025, 11:35:29 UTC
Received 20 Jul 2025, 18:08:26 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10857183
Run time 6 hours 24 min 47 sec
CPU time 20 hours 44 min 11 sec
Validate state Valid
Credit 862.07
Device peak FLOPS 10.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.78 GB
Peak swap size 31.45 GB
Peak disk usage 814.52 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:35:53 (1365156): wrapper (7.7.26015): starting
07:35:53 (1365156): wrapper: running run_atlas (--nthreads 10)
[2025-07-20 07:35:53] Arguments: --nthreads 10
[2025-07-20 07:35:53] Threads: 10
[2025-07-20 07:35:53] Checking for CVMFS
[2025-07-20 07:35:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-20 07:35:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-20 07:35:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-20 07:35:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-20 07:35:54] 2.12.6.0 4120630 8250 272404 148542 1 68 32215287 32935937 10508 16776704 0 32370041 99.509 46223385 29467 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-20 07:35:54] CVMFS is ok
[2025-07-20 07:35:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-20 07:35:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-20 07:35:54] Further information can be found at the LHC@home message board.
[2025-07-20 07:35:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-20 07:35:54] Checking for apptainer binary...
[2025-07-20 07:35:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-20 07:35:54] Running /usr/bin/apptainer --version
[2025-07-20 07:35:54] apptainer version 1.4.1-1.el9
[2025-07-20 07:35:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-20 07:35:54] c-5-4.aglt2.org
[2025-07-20 07:35:54] apptainer works
[2025-07-20 07:35:54] Set ATHENA_PROC_NUMBER=10
[2025-07-20 07:35:54] Set ATHENA_CORE_NUMBER=10
[2025-07-20 07:35:54] Starting ATLAS job with PandaID=6740161226
[2025-07-20 07:35:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-20 14:01:17]  *** The last 200 lines of the pilot log: ***
[2025-07-20 14:01:17] 2025-07-20 18:00:43,428 | INFO     | monitor loop #1380: job 0:6740161226 is in state 'finished'
[2025-07-20 14:01:17] 2025-07-20 18:00:43,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,006 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-20 14:01:17] 2025-07-20 18:00:45,013 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2619.9721250000007
[2025-07-20 14:01:17] 2025-07-20 18:00:45,025 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6740161226/memory_monitor_summary.json (trf name=prmon)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,026 | INFO     | extracted standard info from prmon json
[2025-07-20 14:01:17] 2025-07-20 18:00:45,027 | INFO     | extracted standard memory fields from prmon json
[2025-07-20 14:01:17] 2025-07-20 18:00:45,027 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-20 14:01:17] 2025-07-20 18:00:45,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-20 14:01:17] 2025-07-20 18:00:45,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-20 14:01:17] 2025-07-20 18:00:45,037 | INFO     | fitting pss+swap vs Time
[2025-07-20 14:01:17] 2025-07-20 18:00:45,038 | INFO     | sum of square deviations: 16748700430.846596
[2025-07-20 14:01:17] 2025-07-20 18:00:45,042 | INFO     | sum of deviations: -64827150337.72493
[2025-07-20 14:01:17] 2025-07-20 18:00:45,042 | INFO     | mean x: 1753022892.137566
[2025-07-20 14:01:17] 2025-07-20 18:00:45,042 | INFO     | mean y: 2293445.994708995
[2025-07-20 14:01:17] 2025-07-20 18:00:45,043 | INFO     | -- intersect: 6787505172.916201
[2025-07-20 14:01:17] 2025-07-20 18:00:45,043 | INFO     | intersect: 6787505172.916201
[2025-07-20 14:01:17] 2025-07-20 18:00:45,044 | INFO     | chi2: 2.85847390907467
[2025-07-20 14:01:17] 2025-07-20 18:00:45,044 | INFO     | sum of square deviations: 16092938381.28687
[2025-07-20 14:01:17] 2025-07-20 18:00:45,049 | INFO     | sum of deviations: -33765397107.876633
[2025-07-20 14:01:17] 2025-07-20 18:00:45,049 | INFO     | mean x: 1753022739.6461127
[2025-07-20 14:01:17] 2025-07-20 18:00:45,049 | INFO     | mean y: 2300612.016085791
[2025-07-20 14:01:17] 2025-07-20 18:00:45,050 | INFO     | -- intersect: 3680405103.618295
[2025-07-20 14:01:17] 2025-07-20 18:00:45,050 | INFO     | intersect: 3680405103.618295
[2025-07-20 14:01:17] 2025-07-20 18:00:45,050 | INFO     | chi2: 2.153658590215215
[2025-07-20 14:01:17] 2025-07-20 18:00:45,051 | INFO     | current chi2=2.153658590215215 (change=24.657049225529367 %)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,051 | INFO     | right removable region: 372
[2025-07-20 14:01:17] 2025-07-20 18:00:45,051 | INFO     | sum of square deviations: 16092791371.286875
[2025-07-20 14:01:17] 2025-07-20 18:00:45,056 | INFO     | sum of deviations: -120756545665.24405
[2025-07-20 14:01:17] 2025-07-20 18:00:45,056 | INFO     | mean x: 1753023044.6461127
[2025-07-20 14:01:17] 2025-07-20 18:00:45,056 | INFO     | mean y: 2306385.1420911527
[2025-07-20 14:01:17] 2025-07-20 18:00:45,056 | INFO     | -- intersect: 13156581641.623314
[2025-07-20 14:01:17] 2025-07-20 18:00:45,057 | INFO     | intersect: 13156581641.623314
[2025-07-20 14:01:17] 2025-07-20 18:00:45,057 | INFO     | chi2: 1.405325990303331
[2025-07-20 14:01:17] 2025-07-20 18:00:45,057 | INFO     | current chi2=1.405325990303331 (change=50.83649405223167 %)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,058 | INFO     | sum of square deviations: 15454231474.17122
[2025-07-20 14:01:17] 2025-07-20 18:00:45,062 | INFO     | sum of deviations: -110862451339.15228
[2025-07-20 14:01:17] 2025-07-20 18:00:45,062 | INFO     | mean x: 1753023197.1548913
[2025-07-20 14:01:17] 2025-07-20 18:00:45,062 | INFO     | mean y: 2304003.195652174
[2025-07-20 14:01:17] 2025-07-20 18:00:45,062 | INFO     | -- intersect: 12577788537.369913
[2025-07-20 14:01:17] 2025-07-20 18:00:45,062 | INFO     | intersect: 12577788537.369913
[2025-07-20 14:01:17] 2025-07-20 18:00:45,063 | INFO     | chi2: 1.3508515945182142
[2025-07-20 14:01:17] 2025-07-20 18:00:45,063 | INFO     | current chi2=1.3508515945182142 (change=3.876281813685012 %)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,063 | INFO     | left removable region: 20
[2025-07-20 14:01:17] 2025-07-20 18:00:45,064 | INFO     | sum of square deviations: 13524893698.997126
[2025-07-20 14:01:17] 2025-07-20 18:00:45,068 | INFO     | sum of deviations: -44472378700.27274
[2025-07-20 14:01:17] 2025-07-20 18:00:45,068 | INFO     | mean x: 1753023319.184659
[2025-07-20 14:01:17] 2025-07-20 18:00:45,068 | INFO     | mean y: 2302491.727272727
[2025-07-20 14:01:17] 2025-07-20 18:00:45,068 | INFO     | -- intersect: 5766570859.098626
[2025-07-20 14:01:17] 2025-07-20 18:00:45,068 | INFO     | intersect: 5766570859.098626
[2025-07-20 14:01:17] 2025-07-20 18:00:45,069 | INFO     | chi2: 0.501715342701365
[2025-07-20 14:01:17] 2025-07-20 18:00:45,069 | INFO     | -- intersect: 5766570859.098626
[2025-07-20 14:01:17] 2025-07-20 18:00:45,069 | INFO     | current memory leak: -3.29 B/s (using 352 data points, chi2=0.50)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,070 | INFO     | could have reported an average CPU frequency of 2609 MHz (16 samples)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,071 | INFO     | ..............................
[2025-07-20 14:01:17] 2025-07-20 18:00:45,071 | INFO     | . Timing measurements:
[2025-07-20 14:01:17] 2025-07-20 18:00:45,071 | INFO     | . get job = 0 s
[2025-07-20 14:01:17] 2025-07-20 18:00:45,071 | INFO     | . initial setup = 2 s
[2025-07-20 14:01:17] 2025-07-20 18:00:45,071 | INFO     | . payload setup = 7 s
[2025-07-20 14:01:17] 2025-07-20 18:00:45,071 | INFO     | . stage-in = 0 s
[2025-07-20 14:01:17] 2025-07-20 18:00:45,071 | INFO     | . payload execution = 23029 s
[2025-07-20 14:01:17] 2025-07-20 18:00:45,072 | INFO     | . stage-out = 5 s
[2025-07-20 14:01:17] 2025-07-20 18:00:45,072 | INFO     | . log creation = 0 s
[2025-07-20 14:01:17] 2025-07-20 18:00:45,072 | INFO     | ..............................
[2025-07-20 14:01:17] 2025-07-20 18:00:45,518 | INFO     | 
[2025-07-20 14:01:17] 2025-07-20 18:00:45,518 | INFO     | job summary report
[2025-07-20 14:01:17] 2025-07-20 18:00:45,518 | INFO     | --------------------------------------------------
[2025-07-20 14:01:17] 2025-07-20 18:00:45,518 | INFO     | PanDA job id: 6740161226
[2025-07-20 14:01:17] 2025-07-20 18:00:45,518 | INFO     | task id: 45668738
[2025-07-20 14:01:17] 2025-07-20 18:00:45,518 | INFO     | errors: (none)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | pilot state: finished 
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | transexitcode: 0
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | exeerrorcode: 0
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | exeerrordiag: 
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | exitcode: 0
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | exitmsg: OK
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | cpuconsumptiontime: 73184 s
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | nevents: 400
[2025-07-20 14:01:17] 2025-07-20 18:00:45,519 | INFO     | neventsw: 0
[2025-07-20 14:01:17] 2025-07-20 18:00:45,520 | INFO     | pid: 1375157
[2025-07-20 14:01:17] 2025-07-20 18:00:45,520 | INFO     | pgrp: 1375157
[2025-07-20 14:01:17] 2025-07-20 18:00:45,520 | INFO     | corecount: 10
[2025-07-20 14:01:17] 2025-07-20 18:00:45,520 | INFO     | event service: False
[2025-07-20 14:01:17] 2025-07-20 18:00:45,520 | INFO     | sizes: {0: 2397235, 1: 2397434, 5: 2397696, 11: 2397752, 23039: 2432372, 23040: 2432371, 23045: 2441553, 23048: 2441609, 23064: 2441803}
[2025-07-20 14:01:17] 2025-07-20 18:00:45,520 | INFO     | --------------------------------------------------
[2025-07-20 14:01:17] 2025-07-20 18:00:45,520 | INFO     | 
[2025-07-20 14:01:17] 2025-07-20 18:00:45,520 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-20 14:01:17] 2025-07-20 18:00:45,578 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-20 14:01:17] 2025-07-20 18:00:45,580 | INFO     | job 6740161226 has completed (purged errors)
[2025-07-20 14:01:17] 2025-07-20 18:00:45,581 | INFO     | overall cleanup function is called
[2025-07-20 14:01:17] 2025-07-20 18:00:46,598 | INFO     | --- collectZombieJob: --- 10, [1375157]
[2025-07-20 14:01:17] 2025-07-20 18:00:46,603 | INFO     | zombie collector waiting for pid 1375157
[2025-07-20 14:01:17] 2025-07-20 18:00:46,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-20 14:01:17] 2025-07-20 18:00:46,603 | INFO     | collected zombie processes
[2025-07-20 14:01:17] 2025-07-20 18:00:46,604 | INFO     | will attempt to kill all subprocesses of pid=1375157
[2025-07-20 14:01:17] 2025-07-20 18:00:47,409 | INFO     | process IDs to be killed: [1375157] (in reverse order)
[2025-07-20 14:01:17] 2025-07-20 18:00:47,530 | WARNING  | found no corresponding commands to process id(s)
[2025-07-20 14:01:17] 2025-07-20 18:00:47,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-20 14:01:17] 2025-07-20 18:00:47,585 | INFO     | did not find any defunct processes belonging to 1375157
[2025-07-20 14:01:17] 2025-07-20 18:00:47,610 | INFO     | did not find any defunct processes belonging to 1375157
[2025-07-20 14:01:17] 2025-07-20 18:00:47,613 | INFO     | ready for new job
[2025-07-20 14:01:17] 2025-07-20 18:00:47,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-20 14:01:17] 2025-07-20 18:00:47,617 | INFO     | ***************************************
[2025-07-20 14:01:17] 2025-07-20 18:00:47,617 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-20 14:01:17] 2025-07-20 18:00:47,617 | INFO     | ***************************************
[2025-07-20 14:01:17] 2025-07-20 18:00:47,617 | INFO     | 
[2025-07-20 14:01:17] 2025-07-20 18:00:47,633 | INFO     | architecture information:
[2025-07-20 14:01:17] 2025-07-20 18:00:47,640 | INFO     | executing command: cat /etc/os-release
[2025-07-20 14:01:17] 2025-07-20 18:00:47,662 | INFO     | cat /etc/os-release:
[2025-07-20 14:01:17] NAME="CentOS Linux"
[2025-07-20 14:01:17] VERSION="7 (Core)"
[2025-07-20 14:01:17] ID="centos"
[2025-07-20 14:01:17] ID_LIKE="rhel fedora"
[2025-07-20 14:01:17] VERSION_ID="7"
[2025-07-20 14:01:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-20 14:01:17] ANSI_COLOR="0;31"
[2025-07-20 14:01:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-20 14:01:17] HOME_URL="https://www.centos.org/"
[2025-07-20 14:01:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-20 14:01:17] 
[2025-07-20 14:01:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-20 14:01:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-20 14:01:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-20 14:01:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-20 14:01:17] 
[2025-07-20 14:01:17] 2025-07-20 18:00:47,662 | INFO     | ***************************************
[2025-07-20 14:01:17] 2025-07-20 18:00:48,165 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-20 14:01:17] 2025-07-20 18:00:48,185 | INFO     | sufficient remaining disk space (76369887232 B)
[2025-07-20 14:01:17] 2025-07-20 18:00:48,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-20 14:01:17] 2025-07-20 18:00:48,186 | INFO     | current server update state: UPDATING_FINAL
[2025-07-20 14:01:17] 2025-07-20 18:00:48,186 | INFO     | update_server=False
[2025-07-20 14:01:17] 2025-07-20 18:00:48,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-20 14:01:17] 2025-07-20 18:00:48,441 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-20 14:01:17] 2025-07-20 18:00:48,442 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-20 14:01:17] 2025-07-20 18:00:48,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-20 14:01:17] 2025-07-20 18:00:48,443 | INFO     | will abort loop
[2025-07-20 14:01:17] 2025-07-20 18:00:48,742 | INFO     | all job control threads have been joined
[2025-07-20 14:01:17] 2025-07-20 18:00:48,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-20 14:01:17] 2025-07-20 18:00:48,817 | INFO     | all payload control threads have been joined
[2025-07-20 14:01:17] 2025-07-20 18:00:49,128 | INFO     | all data control threads have been joined
[2025-07-20 14:01:17] 2025-07-20 18:00:49,192 | INFO     | [job] retrieve thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:49,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-20 14:01:17] 2025-07-20 18:00:49,448 | INFO     | [job] job monitor thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:49,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:49,515 | INFO     | [payload] validate_post thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:49,520 | INFO     | [data] copytool_in thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:49,753 | INFO     | [job] control thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:49,824 | INFO     | [payload] control thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:49,932 | INFO     | [job] create_data_payload thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:49,935 | INFO     | [payload] validate_pre thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:50,061 | INFO     | [payload] failed_post thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:50,133 | INFO     | [data] control thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:50,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-20 14:01:17] 2025-07-20 18:00:50,422 | INFO     | [job] validate thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:50,527 | INFO     | [payload] execute_payloads thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:51,224 | INFO     | [job] queue monitor thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:51,444 | INFO     | [data] copytool_out thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:52,797 | INFO     | [data] queue_monitor thread has finished
[2025-07-20 14:01:17] 2025-07-20 18:00:53,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889033119552)>', '<ExcThread(monitor, started 139888527652608)>']
[2025-07-20 14:01:17] 2025-07-20 18:00:58,168 | INFO     | all workflow threads have been joined
[2025-07-20 14:01:17] 2025-07-20 18:00:58,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-20 14:01:17] 2025-07-20 18:00:58,169 | INFO     | traces error code: 0
[2025-07-20 14:01:17] 2025-07-20 18:00:58,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-20 14:01:17] 2025-07-20 18:01:17,520 | INFO     | PID=1368735 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-20 14:01:17] 2025-07-20 18:01:17,520 | INFO     | .. there are 26 such processes running
[2025-07-20 14:01:17] 2025-07-20 18:01:17,521 | INFO     | found 0 job(s) in 20 queues
[2025-07-20 14:01:17] 2025-07-20 18:01:17,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-20 14:01:17] 2025-07-20 18:01:17,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-20 14:01:17] 2025-07-20 18:01:17,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-20 14:01:17] 2025-07-20 18:01:17,521 | INFO     | [monitor] control thread has ended
[2025-07-20 14:01:17] 2025-07-20 18:01:17,731 [wrapper] ==== pilot stdout END ====
[2025-07-20 14:01:17] 2025-07-20 18:01:17,733 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-20 14:01:17] 2025-07-20 18:01:17,736 [wrapper] pilotpid: 1368735
[2025-07-20 14:01:17] 2025-07-20 18:01:17,739 [wrapper] Pilot exit status: 0
[2025-07-20 14:01:17] 2025-07-20 18:01:17,748 [wrapper] pandaids: 6740161226
[2025-07-20 14:01:17] 2025-07-20 18:01:17,814 [wrapper] cleanup supervisor_pilot 2201631 1368736
[2025-07-20 14:01:17] 2025-07-20 18:01:17,817 [wrapper] Test setup, not cleaning
[2025-07-20 14:01:17] 2025-07-20 18:01:17,819 [wrapper] apfmon messages muted
[2025-07-20 14:01:17] 2025-07-20 18:01:17,822 [wrapper] ==== wrapper stdout END ====
[2025-07-20 14:01:17] 2025-07-20 18:01:17,824 [wrapper] ==== wrapper stderr END ====
[2025-07-20 14:01:17]  *** Error codes and diagnostics ***
[2025-07-20 14:01:17]     "exeErrorCode": 0,
[2025-07-20 14:01:17]     "exeErrorDiag": "",
[2025-07-20 14:01:17]     "pilotErrorCode": 0,
[2025-07-20 14:01:17]     "pilotErrorDiag": "",
[2025-07-20 14:01:17]  *** Listing of results directory ***
[2025-07-20 14:01:17] total 529336
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 20 07:31 pilot3.tar.gz
[2025-07-20 14:01:17] -rwx------. 1 boincer umatlas     36292 Jul 20 07:34 runpilot2-wrapper.sh
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 20 07:34 queuedata.json
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas       100 Jul 20 07:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-20 14:01:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 20 07:35 run_atlas
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas       105 Jul 20 07:35 job.xml
[2025-07-20 14:01:17] -rw-r--r--. 2 boincer umatlas 306074904 Jul 20 07:35 EVNT.45668735._000024.pool.root.1
[2025-07-20 14:01:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 20 07:35 start_atlas.sh
[2025-07-20 14:01:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 20 07:35 shared
[2025-07-20 14:01:17] -rw-r--r--. 2 boincer umatlas    542877 Jul 20 07:35 input.tar.gz
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas         0 Jul 20 07:35 boinc_lockfile
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas      2513 Jul 20 07:35 pandaJob.out
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas    978438 Jul 20 07:36 agis_schedconf.cvmfs.json
[2025-07-20 14:01:17] drwx------. 4 boincer umatlas      4096 Jul 20 07:36 pilot3
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas      6656 Jul 20 13:56 init_data.xml
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas 227400120 Jul 20 13:59 HITS.45668738._000605.pool.root.1
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas       531 Jul 20 13:59 boinc_task_state.xml
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas      1041 Jul 20 14:00 memory_monitor_summary.json
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas        95 Jul 20 14:00 pilot_heartbeat.json
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas   1593055 Jul 20 14:00 agis_ddmendpoints.agis.ALL.json
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas    507410 Jul 20 14:00 log.45668738._000605.job.log.tgz.1
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas      7815 Jul 20 14:00 heartbeat.json
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 20 14:01 boinc_mmap_file
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas        28 Jul 20 14:01 wrapper_checkpoint.txt
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas       823 Jul 20 14:01 pilotlog.txt
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas   1842425 Jul 20 14:01 log.45668738._000605.job.log.1
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas       357 Jul 20 14:01 output.list
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas       620 Jul 20 14:01 runtime_log
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas   2365440 Jul 20 14:01 result.tar.gz
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas      8648 Jul 20 14:01 runtime_log.err
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas       656 Jul 20 14:01 4uOLDmIUhx7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfbFLDmiFpPGm.diag
[2025-07-20 14:01:17] -rw-r--r--. 1 boincer umatlas     21233 Jul 20 14:01 stderr.txt
[2025-07-20 14:01:17] HITS file was successfully produced:
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas 227400120 Jul 20 13:59 shared/HITS.pool.root.1
[2025-07-20 14:01:17]  *** Contents of shared directory: ***
[2025-07-20 14:01:17] total 523840
[2025-07-20 14:01:17] -rw-r--r--. 2 boincer umatlas 306074904 Jul 20 07:35 ATLAS.root_0
[2025-07-20 14:01:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 20 07:35 start_atlas.sh
[2025-07-20 14:01:17] -rw-r--r--. 2 boincer umatlas    542877 Jul 20 07:35 input.tar.gz
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas 227400120 Jul 20 13:59 HITS.pool.root.1
[2025-07-20 14:01:17] -rw-------. 1 boincer umatlas   2365440 Jul 20 14:01 result.tar.gz
14:01:19 (1365156): run_atlas exited; CPU time 73832.036373
14:01:19 (1365156): called boinc_finish(0)

</stderr_txt>
]]>


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