Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:50:17 (158704): wrapper (7.7.26015): starting
21:50:17 (158704): wrapper: running run_atlas (--nthreads 10)
[2025-07-19 21:50:17] Arguments: --nthreads 10
[2025-07-19 21:50:17] Threads: 10
[2025-07-19 21:50:17] Checking for CVMFS
[2025-07-19 21:50:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-19 21:50:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-19 21:50:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-19 21:50:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-19 21:50:20] 2.13.0.0 1969590 7664 284672 148524 2 360 21006198 32935936 15366 16776704 0 34329581 99.556 41597866 26579 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-19 21:50:20] CVMFS is ok
[2025-07-19 21:50:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-19 21:50:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-19 21:50:20] Further information can be found at the LHC@home message board.
[2025-07-19 21:50:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-19 21:50:20] Checking for apptainer binary...
[2025-07-19 21:50:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-19 21:50:20] Running /usr/bin/apptainer --version
[2025-07-19 21:50:20] apptainer version 1.4.1-1.el9
[2025-07-19 21:50:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-19 21:50:21] c-8-36.aglt2.org
[2025-07-19 21:50:21] apptainer works
[2025-07-19 21:50:21] Set ATHENA_PROC_NUMBER=10
[2025-07-19 21:50:21] Set ATHENA_CORE_NUMBER=10
[2025-07-19 21:50:21] Starting ATLAS job with PandaID=6739271761
[2025-07-19 21:50:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-20 08:20:52]  *** The last 200 lines of the pilot log: ***
[2025-07-20 08:20:52] 2025-07-20 12:20:17,145 | INFO     | monitor loop #2056: job 0:6739271761 is in state 'finished'
[2025-07-20 08:20:52] 2025-07-20 12:20:17,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,258 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-20 08:20:52] 2025-07-20 12:20:19,265 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2620.102775
[2025-07-20 08:20:52] 2025-07-20 12:20:19,272 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6739271761/memory_monitor_summary.json (trf name=prmon)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,273 | INFO     | extracted standard info from prmon json
[2025-07-20 08:20:52] 2025-07-20 12:20:19,273 | INFO     | extracted standard memory fields from prmon json
[2025-07-20 08:20:52] 2025-07-20 12:20:19,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-20 08:20:52] 2025-07-20 12:20:19,273 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-20 08:20:52] 2025-07-20 12:20:19,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-20 08:20:52] 2025-07-20 12:20:19,286 | INFO     | fitting pss+swap vs Time
[2025-07-20 08:20:52] 2025-07-20 12:20:19,287 | INFO     | sum of square deviations: 72829582669.22198
[2025-07-20 08:20:52] 2025-07-20 12:20:19,296 | INFO     | sum of deviations: 22333283844.974007
[2025-07-20 08:20:52] 2025-07-20 12:20:19,297 | INFO     | mean x: 1752995214.6661265
[2025-07-20 08:20:52] 2025-07-20 12:20:19,297 | INFO     | mean y: 2222048.922204214
[2025-07-20 08:20:52] 2025-07-20 12:20:19,297 | INFO     | -- intersect: -535336155.7682192
[2025-07-20 08:20:52] 2025-07-20 12:20:19,297 | INFO     | intersect: -535336155.7682192
[2025-07-20 08:20:52] 2025-07-20 12:20:19,298 | INFO     | chi2: 3.5101224298110916
[2025-07-20 08:20:52] 2025-07-20 12:20:19,299 | INFO     | sum of square deviations: 71073340206.98534
[2025-07-20 08:20:52] 2025-07-20 12:20:19,308 | INFO     | sum of deviations: 70473551042.29915
[2025-07-20 08:20:52] 2025-07-20 12:20:19,308 | INFO     | mean x: 1752995062.1715686
[2025-07-20 08:20:52] 2025-07-20 12:20:19,308 | INFO     | mean y: 2226207.5114379083
[2025-07-20 08:20:52] 2025-07-20 12:20:19,308 | INFO     | -- intersect: -1735975298.581623
[2025-07-20 08:20:52] 2025-07-20 12:20:19,308 | INFO     | intersect: -1735975298.581623
[2025-07-20 08:20:52] 2025-07-20 12:20:19,309 | INFO     | chi2: 2.7941999741633263
[2025-07-20 08:20:52] 2025-07-20 12:20:19,310 | INFO     | current chi2=2.7941999741633263 (change=20.395939741802536 %)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,310 | INFO     | right removable region: 611
[2025-07-20 08:20:52] 2025-07-20 12:20:19,311 | INFO     | sum of square deviations: 71073089496.98535
[2025-07-20 08:20:52] 2025-07-20 12:20:19,320 | INFO     | sum of deviations: -96839226544.43134
[2025-07-20 08:20:52] 2025-07-20 12:20:19,320 | INFO     | mean x: 1752995367.1715686
[2025-07-20 08:20:52] 2025-07-20 12:20:19,320 | INFO     | mean y: 2232373.6993464055
[2025-07-20 08:20:52] 2025-07-20 12:20:19,320 | INFO     | -- intersect: 2390741395.8105445
[2025-07-20 08:20:52] 2025-07-20 12:20:19,320 | INFO     | intersect: 2390741395.8105445
[2025-07-20 08:20:52] 2025-07-20 12:20:19,321 | INFO     | chi2: 1.4586707919228277
[2025-07-20 08:20:52] 2025-07-20 12:20:19,322 | INFO     | current chi2=1.4586707919228277 (change=58.443877070084696 %)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,322 | INFO     | sum of square deviations: 69345061974.71164
[2025-07-20 08:20:52] 2025-07-20 12:20:19,331 | INFO     | sum of deviations: -118782002574.69508
[2025-07-20 08:20:52] 2025-07-20 12:20:19,332 | INFO     | mean x: 1752995519.6771004
[2025-07-20 08:20:52] 2025-07-20 12:20:19,332 | INFO     | mean y: 2234300.741350906
[2025-07-20 08:20:52] 2025-07-20 12:20:19,332 | INFO     | -- intersect: 3004961710.6274123
[2025-07-20 08:20:52] 2025-07-20 12:20:19,332 | INFO     | intersect: 3004961710.6274123
[2025-07-20 08:20:52] 2025-07-20 12:20:19,333 | INFO     | chi2: 1.326432853823404
[2025-07-20 08:20:52] 2025-07-20 12:20:19,333 | INFO     | current chi2=1.326432853823404 (change=9.0656465346171 %)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,334 | INFO     | left removable region: 20
[2025-07-20 08:20:52] 2025-07-20 12:20:19,336 | INFO     | sum of square deviations: 64004400460.714134
[2025-07-20 08:20:52] 2025-07-20 12:20:19,346 | INFO     | sum of deviations: -24571334683.490677
[2025-07-20 08:20:52] 2025-07-20 12:20:19,346 | INFO     | mean x: 1752995641.6886632
[2025-07-20 08:20:52] 2025-07-20 12:20:19,346 | INFO     | mean y: 2234445.986463621
[2025-07-20 08:20:52] 2025-07-20 12:20:19,347 | INFO     | -- intersect: 675210714.8145906
[2025-07-20 08:20:52] 2025-07-20 12:20:19,347 | INFO     | intersect: 675210714.8145906
[2025-07-20 08:20:52] 2025-07-20 12:20:19,348 | INFO     | chi2: 0.4897632722594815
[2025-07-20 08:20:52] 2025-07-20 12:20:19,348 | INFO     | -- intersect: 675210714.8145906
[2025-07-20 08:20:52] 2025-07-20 12:20:19,348 | INFO     | current memory leak: -0.38 B/s (using 591 data points, chi2=0.49)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,349 | INFO     | could have reported an average CPU frequency of 2600 MHz (24 samples)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,350 | INFO     | ..............................
[2025-07-20 08:20:52] 2025-07-20 12:20:19,350 | INFO     | . Timing measurements:
[2025-07-20 08:20:52] 2025-07-20 12:20:19,350 | INFO     | . get job = 0 s
[2025-07-20 08:20:52] 2025-07-20 12:20:19,350 | INFO     | . initial setup = 6 s
[2025-07-20 08:20:52] 2025-07-20 12:20:19,350 | INFO     | . payload setup = 42 s
[2025-07-20 08:20:52] 2025-07-20 12:20:19,350 | INFO     | . stage-in = 0 s
[2025-07-20 08:20:52] 2025-07-20 12:20:19,350 | INFO     | . payload execution = 37607 s
[2025-07-20 08:20:52] 2025-07-20 12:20:19,351 | INFO     | . stage-out = 2 s
[2025-07-20 08:20:52] 2025-07-20 12:20:19,351 | INFO     | . log creation = 0 s
[2025-07-20 08:20:52] 2025-07-20 12:20:19,351 | INFO     | ..............................
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | 
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | job summary report
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | --------------------------------------------------
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | PanDA job id: 6739271761
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | task id: 45668889
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | errors: (none)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | pilot state: finished 
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | transexitcode: 0
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | exeerrorcode: 0
[2025-07-20 08:20:52] 2025-07-20 12:20:19,442 | INFO     | exeerrordiag: 
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | exitcode: 0
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | exitmsg: OK
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | cpuconsumptiontime: 68362 s
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | nevents: 400
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | neventsw: 0
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | pid: 170738
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | pgrp: 170738
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | corecount: 10
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | event service: False
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | sizes: {0: 2396598, 1: 2397283, 2: 2397311, 3: 2397510, 14: 2397510, 25: 2397538, 36: 2397896, 37: 2397984, 47: 2398012, 37653: 2439539, 37654: 2439538, 37658: 244
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | --------------------------------------------------
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | 
[2025-07-20 08:20:52] 2025-07-20 12:20:19,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-20 08:20:52] 2025-07-20 12:20:19,455 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,455 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-20 08:20:52] 2025-07-20 12:20:19,457 | INFO     | job 6739271761 has completed (purged errors)
[2025-07-20 08:20:52] 2025-07-20 12:20:19,457 | INFO     | overall cleanup function is called
[2025-07-20 08:20:52] 2025-07-20 12:20:20,464 | INFO     | --- collectZombieJob: --- 10, [170738]
[2025-07-20 08:20:52] 2025-07-20 12:20:20,465 | INFO     | zombie collector waiting for pid 170738
[2025-07-20 08:20:52] 2025-07-20 12:20:20,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-20 08:20:52] 2025-07-20 12:20:20,465 | INFO     | collected zombie processes
[2025-07-20 08:20:52] 2025-07-20 12:20:20,465 | INFO     | will attempt to kill all subprocesses of pid=170738
[2025-07-20 08:20:52] 2025-07-20 12:20:20,785 | INFO     | process IDs to be killed: [170738] (in reverse order)
[2025-07-20 08:20:52] 2025-07-20 12:20:20,884 | WARNING  | found no corresponding commands to process id(s)
[2025-07-20 08:20:52] 2025-07-20 12:20:20,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-20 08:20:52] 2025-07-20 12:20:20,896 | INFO     | did not find any defunct processes belonging to 170738
[2025-07-20 08:20:52] 2025-07-20 12:20:20,908 | INFO     | did not find any defunct processes belonging to 170738
[2025-07-20 08:20:52] 2025-07-20 12:20:20,908 | INFO     | ready for new job
[2025-07-20 08:20:52] 2025-07-20 12:20:20,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-20 08:20:52] 2025-07-20 12:20:20,912 | INFO     | ***************************************
[2025-07-20 08:20:52] 2025-07-20 12:20:20,912 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-20 08:20:52] 2025-07-20 12:20:20,912 | INFO     | ***************************************
[2025-07-20 08:20:52] 2025-07-20 12:20:20,912 | INFO     | 
[2025-07-20 08:20:52] 2025-07-20 12:20:20,925 | INFO     | architecture information:
[2025-07-20 08:20:52] 2025-07-20 12:20:20,926 | INFO     | executing command: cat /etc/os-release
[2025-07-20 08:20:52] 2025-07-20 12:20:20,940 | INFO     | cat /etc/os-release:
[2025-07-20 08:20:52] NAME="CentOS Linux"
[2025-07-20 08:20:52] VERSION="7 (Core)"
[2025-07-20 08:20:52] ID="centos"
[2025-07-20 08:20:52] ID_LIKE="rhel fedora"
[2025-07-20 08:20:52] VERSION_ID="7"
[2025-07-20 08:20:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-20 08:20:52] ANSI_COLOR="0;31"
[2025-07-20 08:20:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-20 08:20:52] HOME_URL="https://www.centos.org/"
[2025-07-20 08:20:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-20 08:20:52] 
[2025-07-20 08:20:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-20 08:20:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-20 08:20:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-20 08:20:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-20 08:20:52] 
[2025-07-20 08:20:52] 2025-07-20 12:20:20,940 | INFO     | ***************************************
[2025-07-20 08:20:52] 2025-07-20 12:20:21,443 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-20 08:20:52] 2025-07-20 12:20:21,463 | INFO     | sufficient remaining disk space (76361498624 B)
[2025-07-20 08:20:52] 2025-07-20 12:20:21,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-20 08:20:52] 2025-07-20 12:20:21,464 | INFO     | current server update state: UPDATING_FINAL
[2025-07-20 08:20:52] 2025-07-20 12:20:21,464 | INFO     | update_server=False
[2025-07-20 08:20:52] 2025-07-20 12:20:21,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-20 08:20:52] 2025-07-20 12:20:21,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-20 08:20:52] 2025-07-20 12:20:21,465 | INFO     | aborting loop
[2025-07-20 08:20:52] 2025-07-20 12:20:21,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-20 08:20:52] 2025-07-20 12:20:21,933 | INFO     | all payload control threads have been joined
[2025-07-20 08:20:52] 2025-07-20 12:20:21,934 | INFO     | all job control threads have been joined
[2025-07-20 08:20:52] 2025-07-20 12:20:22,261 | INFO     | all data control threads have been joined
[2025-07-20 08:20:52] 2025-07-20 12:20:22,468 | INFO     | [job] job monitor thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:22,469 | INFO     | [job] retrieve thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:22,600 | INFO     | [payload] execute_payloads thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:22,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-20 08:20:52] 2025-07-20 12:20:22,694 | INFO     | [payload] validate_post thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:22,938 | INFO     | [payload] control thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:22,940 | INFO     | [job] control thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:23,074 | INFO     | [data] copytool_in thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:23,096 | INFO     | [payload] failed_post thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:23,266 | INFO     | [data] control thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:23,458 | INFO     | [job] validate thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:23,574 | INFO     | [data] copytool_out thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:23,891 | INFO     | [job] create_data_payload thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:23,907 | INFO     | [payload] validate_pre thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:24,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-20 08:20:52] 2025-07-20 12:20:25,462 | INFO     | [job] queue monitor thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:26,641 | INFO     | [data] queue_monitor thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:32,172 | INFO     | job.realtimelogging is not enabled
[2025-07-20 08:20:52] 2025-07-20 12:20:33,177 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-20 08:20:52] 2025-07-20 12:20:35,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720189978432)>', '<ExcThread(monitor, started 139719312668416)>']
[2025-07-20 08:20:52] 2025-07-20 12:20:40,031 | INFO     | all workflow threads have been joined
[2025-07-20 08:20:52] 2025-07-20 12:20:40,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-20 08:20:52] 2025-07-20 12:20:40,032 | INFO     | traces error code: 0
[2025-07-20 08:20:52] 2025-07-20 12:20:40,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-20 08:20:52] 2025-07-20 12:20:52,673 | INFO     | PID=163070 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-20 08:20:52] 2025-07-20 12:20:52,674 | INFO     | .. there are 24 such processes running
[2025-07-20 08:20:52] 2025-07-20 12:20:52,674 | INFO     | found 0 job(s) in 20 queues
[2025-07-20 08:20:52] 2025-07-20 12:20:52,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-20 08:20:52] 2025-07-20 12:20:52,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-20 08:20:52] 2025-07-20 12:20:52,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-20 08:20:52] 2025-07-20 12:20:52,675 | CRITICAL | thread 'MainThread' is not alive
[2025-07-20 08:20:52] 2025-07-20 12:20:52,675 | INFO     | [monitor] control thread has ended
[2025-07-20 08:20:52] 2025-07-20 12:20:52,813 [wrapper] ==== pilot stdout END ====
[2025-07-20 08:20:52] 2025-07-20 12:20:52,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-20 08:20:52] 2025-07-20 12:20:52,818 [wrapper] pilotpid: 163070
[2025-07-20 08:20:52] 2025-07-20 12:20:52,820 [wrapper] Pilot exit status: 0
[2025-07-20 08:20:52] 2025-07-20 12:20:52,830 [wrapper] pandaids: 6739271761
[2025-07-20 08:20:52] 2025-07-20 12:20:52,891 [wrapper] cleanup supervisor_pilot 1371523 163071
[2025-07-20 08:20:52] 2025-07-20 12:20:52,895 [wrapper] Test setup, not cleaning
[2025-07-20 08:20:52] 2025-07-20 12:20:52,899 [wrapper] apfmon messages muted
[2025-07-20 08:20:52] 2025-07-20 12:20:52,902 [wrapper] ==== wrapper stdout END ====
[2025-07-20 08:20:52] 2025-07-20 12:20:52,905 [wrapper] ==== wrapper stderr END ====
[2025-07-20 08:20:52]  *** Error codes and diagnostics ***
[2025-07-20 08:20:52]     "exeErrorCode": 0,
[2025-07-20 08:20:52]     "exeErrorDiag": "",
[2025-07-20 08:20:52]     "pilotErrorCode": 0,
[2025-07-20 08:20:52]     "pilotErrorDiag": "",
[2025-07-20 08:20:52]  *** Listing of results directory ***
[2025-07-20 08:20:52] total 523236
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas    530466 Jul 19 19:57 pilot3.tar.gz
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas      5112 Jul 19 20:00 queuedata.json
[2025-07-20 08:20:52] -rwx------. 1 boincer umatlas     36292 Jul 19 20:00 runpilot2-wrapper.sh
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas       100 Jul 19 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-20 08:20:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 19 21:50 run_atlas
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas       105 Jul 19 21:50 job.xml
[2025-07-20 08:20:52] -rw-r--r--. 2 boincer umatlas 301387063 Jul 19 21:50 EVNT.45668886._000005.pool.root.1
[2025-07-20 08:20:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 21:50 start_atlas.sh
[2025-07-20 08:20:52] drwxrwx--x. 2 boincer umatlas      4096 Jul 19 21:50 shared
[2025-07-20 08:20:52] -rw-r--r--. 2 boincer umatlas    542872 Jul 19 21:50 input.tar.gz
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas         0 Jul 19 21:50 boinc_lockfile
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas      2534 Jul 19 21:50 pandaJob.out
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas    978446 Jul 19 21:51 agis_schedconf.cvmfs.json
[2025-07-20 08:20:52] drwx------. 4 boincer umatlas      4096 Jul 19 21:51 pilot3
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas      6659 Jul 20 08:10 init_data.xml
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas       531 Jul 20 08:19 boinc_task_state.xml
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas 223691339 Jul 20 08:19 HITS.45668889._000120.pool.root.1
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas      1039 Jul 20 08:20 memory_monitor_summary.json
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas   1593055 Jul 20 08:20 agis_ddmendpoints.agis.ALL.json
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas    615774 Jul 20 08:20 log.45668889._000120.job.log.tgz.1
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas        95 Jul 20 08:20 pilot_heartbeat.json
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas      7812 Jul 20 08:20 heartbeat.json
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas        28 Jul 20 08:20 wrapper_checkpoint.txt
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas      8192 Jul 20 08:20 boinc_mmap_file
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas       892 Jul 20 08:20 pilotlog.txt
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas   2809630 Jul 20 08:20 log.45668889._000120.job.log.1
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas       357 Jul 20 08:20 output.list
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas       620 Jul 20 08:20 runtime_log
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas   3440640 Jul 20 08:20 result.tar.gz
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas      8653 Jul 20 08:20 runtime_log.err
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas       657 Jul 20 08:20 6vHKDmleWx7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwbsKDmaal6To.diag
[2025-07-20 08:20:52] -rw-r--r--. 1 boincer umatlas     21207 Jul 20 08:20 stderr.txt
[2025-07-20 08:20:52] HITS file was successfully produced:
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas 223691339 Jul 20 08:19 shared/HITS.pool.root.1
[2025-07-20 08:20:52]  *** Contents of shared directory: ***
[2025-07-20 08:20:52] total 516688
[2025-07-20 08:20:52] -rw-r--r--. 2 boincer umatlas 301387063 Jul 19 21:50 ATLAS.root_0
[2025-07-20 08:20:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 21:50 start_atlas.sh
[2025-07-20 08:20:52] -rw-r--r--. 2 boincer umatlas    542872 Jul 19 21:50 input.tar.gz
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas 223691339 Jul 20 08:19 HITS.pool.root.1
[2025-07-20 08:20:52] -rw-------. 1 boincer umatlas   3440640 Jul 20 08:20 result.tar.gz
08:20:54 (158704): run_atlas exited; CPU time 69805.303123
08:20:54 (158704): called boinc_finish(0)

</stderr_txt>
]]>

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