Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:37:39 (3759): wrapper (7.7.26015): starting
01:37:39 (3759): wrapper: running run_atlas (--nthreads 4)
[2025-07-20 01:37:39] Arguments: --nthreads 4
[2025-07-20 01:37:39] Threads: 4
[2025-07-20 01:37:39] Checking for CVMFS
[2025-07-20 01:37:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-20 01:38:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-20 01:38:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-20 01:38:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-20 01:38:01] 2.11.5.0 3981 0 23968 148523 3 1 3070480 4194305 0 130560 0 0 0.000 1291 287 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-07-20 01:38:01] CVMFS is ok
[2025-07-20 01:38:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-20 01:38:01] Checking for apptainer binary...
[2025-07-20 01:38:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-20 01:38:01] Running /usr/bin/apptainer --version
[2025-07-20 01:38:02] apptainer version 1.0.3
[2025-07-20 01:38:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-20 01:38:03] TeeC27
[2025-07-20 01:38:03] apptainer works
[2025-07-20 01:38:03] Set ATHENA_PROC_NUMBER=4
[2025-07-20 01:38:03] Set ATHENA_CORE_NUMBER=4
[2025-07-20 01:38:03] Starting ATLAS job with PandaID=6739271751
[2025-07-20 01:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-20 05:31:52]  *** The last 200 lines of the pilot log: ***
[2025-07-20 05:31:52] 2025-07-20 04:31:29,631 | INFO     | monitor loop #1053: job 0:6739271751 is in state 'finished'
[2025-07-20 05:31:52] 2025-07-20 04:31:29,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-20 05:31:52] 2025-07-20 04:31:32,135 | INFO     | monitor loop #1054: job 0:6739271751 is in state 'finished'
[2025-07-20 05:31:52] 2025-07-20 04:31:32,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-20 05:31:52] 2025-07-20 04:31:32,907 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-20 05:31:52] 2025-07-20 04:31:32,908 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3200.0755
[2025-07-20 05:31:52] 2025-07-20 04:31:32,909 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6739271751/memory_monitor_summary.json (trf name=prmon)
[2025-07-20 05:31:52] 2025-07-20 04:31:32,910 | INFO     | extracted standard info from prmon json
[2025-07-20 05:31:52] 2025-07-20 04:31:32,910 | INFO     | extracted standard memory fields from prmon json
[2025-07-20 05:31:52] 2025-07-20 04:31:32,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-20 05:31:52] 2025-07-20 04:31:32,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-20 05:31:52] 2025-07-20 04:31:32,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-20 05:31:52] 2025-07-20 04:31:32,915 | INFO     | fitting pss+swap vs Time
[2025-07-20 05:31:52] 2025-07-20 04:31:32,915 | INFO     | sum of square deviations: 3723716330.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,918 | INFO     | sum of deviations: -20670552476.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,918 | INFO     | mean x: 1752978893.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,918 | INFO     | mean y: 2390335.082969432
[2025-07-20 05:31:52] 2025-07-20 04:31:32,918 | INFO     | -- intersect: 9733271794.862932
[2025-07-20 05:31:52] 2025-07-20 04:31:32,918 | INFO     | intersect: 9733271794.862932
[2025-07-20 05:31:52] 2025-07-20 04:31:32,919 | INFO     | chi2: 2.343906580017378
[2025-07-20 05:31:52] 2025-07-20 04:31:32,919 | INFO     | sum of square deviations: 3485088600.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,922 | INFO     | sum of deviations: -20846735908.999996
[2025-07-20 05:31:52] 2025-07-20 04:31:32,922 | INFO     | mean x: 1752978740.5
[2025-07-20 05:31:52] 2025-07-20 04:31:32,922 | INFO     | mean y: 2390231.348214286
[2025-07-20 05:31:52] 2025-07-20 04:31:32,922 | INFO     | -- intersect: 10488173822.989166
[2025-07-20 05:31:52] 2025-07-20 04:31:32,922 | INFO     | intersect: 10488173822.989166
[2025-07-20 05:31:52] 2025-07-20 04:31:32,922 | INFO     | chi2: 2.3367624871326846
[2025-07-20 05:31:52] 2025-07-20 04:31:32,922 | INFO     | current chi2=2.3367624871326846 (change=0.3047942672118171 %)
[2025-07-20 05:31:52] 2025-07-20 04:31:32,923 | INFO     | right removable region: 223
[2025-07-20 05:31:52] 2025-07-20 04:31:32,923 | INFO     | sum of square deviations: 3485088600.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,925 | INFO     | sum of deviations: -63203412842.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,926 | INFO     | mean x: 1752979045.5
[2025-07-20 05:31:52] 2025-07-20 04:31:32,926 | INFO     | mean y: 2417339.1428571427
[2025-07-20 05:31:52] 2025-07-20 04:31:32,926 | INFO     | -- intersect: 31793361855.190918
[2025-07-20 05:31:52] 2025-07-20 04:31:32,926 | INFO     | intersect: 31793361855.190918
[2025-07-20 05:31:52] 2025-07-20 04:31:32,926 | INFO     | chi2: 0.467421646418337
[2025-07-20 05:31:52] 2025-07-20 04:31:32,926 | INFO     | current chi2=0.467421646418337 (change=80.05800869355163 %)
[2025-07-20 05:31:52] 2025-07-20 04:31:32,927 | INFO     | sum of square deviations: 3256879670.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,929 | INFO     | sum of deviations: -57835280350.00001
[2025-07-20 05:31:52] 2025-07-20 04:31:32,929 | INFO     | mean x: 1752979198.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,929 | INFO     | mean y: 2413724.4337899545
[2025-07-20 05:31:52] 2025-07-20 04:31:32,929 | INFO     | -- intersect: 31131609039.17754
[2025-07-20 05:31:52] 2025-07-20 04:31:32,929 | INFO     | intersect: 31131609039.17754
[2025-07-20 05:31:52] 2025-07-20 04:31:32,930 | INFO     | chi2: 0.45800003777864756
[2025-07-20 05:31:52] 2025-07-20 04:31:32,930 | INFO     | current chi2=0.45800003777864756 (change=2.015655182399749 %)
[2025-07-20 05:31:52] 2025-07-20 04:31:32,930 | INFO     | left removable region: 20
[2025-07-20 05:31:52] 2025-07-20 04:31:32,930 | INFO     | sum of square deviations: 2593916542.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,932 | INFO     | sum of deviations: -34184190586.999996
[2025-07-20 05:31:52] 2025-07-20 04:31:32,933 | INFO     | mean x: 1752979320.0
[2025-07-20 05:31:52] 2025-07-20 04:31:32,933 | INFO     | mean y: 2397070.4975369456
[2025-07-20 05:31:52] 2025-07-20 04:31:32,933 | INFO     | -- intersect: 23104211720.149303
[2025-07-20 05:31:52] 2025-07-20 04:31:32,933 | INFO     | intersect: 23104211720.149303
[2025-07-20 05:31:52] 2025-07-20 04:31:32,933 | INFO     | chi2: 0.3473882184331556
[2025-07-20 05:31:52] 2025-07-20 04:31:32,933 | INFO     | -- intersect: 23104211720.149303
[2025-07-20 05:31:52] 2025-07-20 04:31:32,933 | INFO     | current memory leak: -13.18 B/s (using 203 data points, chi2=0.35)
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | could have reported an average CPU frequency of 3200 MHz (11 samples)
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | ..............................
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | . Timing measurements:
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | . get job = 0 s
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | . initial setup = 3 s
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | . payload setup = 7 s
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | . stage-in = 0 s
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | . payload execution = 13936 s
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | . stage-out = 1 s
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | . log creation = 0 s
[2025-07-20 05:31:52] 2025-07-20 04:31:32,934 | INFO     | ..............................
[2025-07-20 05:31:52] 2025-07-20 04:31:33,039 | INFO     | 
[2025-07-20 05:31:52] 2025-07-20 04:31:33,039 | INFO     | job summary report
[2025-07-20 05:31:52] 2025-07-20 04:31:33,039 | INFO     | --------------------------------------------------
[2025-07-20 05:31:52] 2025-07-20 04:31:33,039 | INFO     | PanDA job id: 6739271751
[2025-07-20 05:31:52] 2025-07-20 04:31:33,039 | INFO     | task id: 45668889
[2025-07-20 05:31:52] 2025-07-20 04:31:33,039 | INFO     | errors: (none)
[2025-07-20 05:31:52] 2025-07-20 04:31:33,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | pilot state: finished 
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | transexitcode: 0
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | exeerrorcode: 0
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | exeerrordiag: 
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | exitcode: 0
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | exitmsg: OK
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | cpuconsumptiontime: 53434 s
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | nevents: 400
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | neventsw: 0
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | pid: 14421
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | pgrp: 14421
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | corecount: 4
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | event service: False
[2025-07-20 05:31:52] 2025-07-20 04:31:33,040 | INFO     | sizes: {0: 2397425, 1: 2397453, 3: 2397715, 11: 2397743, 13948: 2428407, 13949: 2437403, 13951: 2437587, 13965: 2437781}
[2025-07-20 05:31:52] 2025-07-20 04:31:33,041 | INFO     | --------------------------------------------------
[2025-07-20 05:31:52] 2025-07-20 04:31:33,041 | INFO     | 
[2025-07-20 05:31:52] 2025-07-20 04:31:33,041 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-07-20 05:31:52] 2025-07-20 04:31:33,049 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,049 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,049 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-20 05:31:52] 2025-07-20 04:31:33,051 | INFO     | job 6739271751 has completed (purged errors)
[2025-07-20 05:31:52] 2025-07-20 04:31:33,051 | INFO     | overall cleanup function is called
[2025-07-20 05:31:52] 2025-07-20 04:31:34,057 | INFO     | --- collectZombieJob: --- 10, [14421]
[2025-07-20 05:31:52] 2025-07-20 04:31:34,058 | INFO     | zombie collector waiting for pid 14421
[2025-07-20 05:31:52] 2025-07-20 04:31:34,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-20 05:31:52] 2025-07-20 04:31:34,058 | INFO     | collected zombie processes
[2025-07-20 05:31:52] 2025-07-20 04:31:34,059 | INFO     | will attempt to kill all subprocesses of pid=14421
[2025-07-20 05:31:52] 2025-07-20 04:31:34,131 | INFO     | process IDs to be killed: [14421] (in reverse order)
[2025-07-20 05:31:52] 2025-07-20 04:31:34,155 | WARNING  | found no corresponding commands to process id(s)
[2025-07-20 05:31:52] 2025-07-20 04:31:34,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-20 05:31:52] 2025-07-20 04:31:34,158 | INFO     | did not find any defunct processes belonging to 14421
[2025-07-20 05:31:52] 2025-07-20 04:31:34,159 | INFO     | did not find any defunct processes belonging to 14421
[2025-07-20 05:31:52] 2025-07-20 04:31:34,160 | INFO     | ready for new job
[2025-07-20 05:31:52] 2025-07-20 04:31:34,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-20 05:31:52] 2025-07-20 04:31:34,161 | INFO     | ***************************************
[2025-07-20 05:31:52] 2025-07-20 04:31:34,161 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-20 05:31:52] 2025-07-20 04:31:34,161 | INFO     | ***************************************
[2025-07-20 05:31:52] 2025-07-20 04:31:34,161 | INFO     | 
[2025-07-20 05:31:52] 2025-07-20 04:31:34,181 | INFO     | architecture information:
[2025-07-20 05:31:52] 2025-07-20 04:31:34,181 | INFO     | executing command: cat /etc/os-release
[2025-07-20 05:31:52] 2025-07-20 04:31:34,187 | INFO     | cat /etc/os-release:
[2025-07-20 05:31:52] NAME="CentOS Linux"
[2025-07-20 05:31:52] VERSION="7 (Core)"
[2025-07-20 05:31:52] ID="centos"
[2025-07-20 05:31:52] ID_LIKE="rhel fedora"
[2025-07-20 05:31:52] VERSION_ID="7"
[2025-07-20 05:31:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-20 05:31:52] ANSI_COLOR="0;31"
[2025-07-20 05:31:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-20 05:31:52] HOME_URL="https://www.centos.org/"
[2025-07-20 05:31:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-20 05:31:52] 
[2025-07-20 05:31:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-20 05:31:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-20 05:31:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-20 05:31:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-20 05:31:52] 
[2025-07-20 05:31:52] 2025-07-20 04:31:34,187 | INFO     | ***************************************
[2025-07-20 05:31:52] 2025-07-20 04:31:34,691 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-07-20 05:31:52] 2025-07-20 04:31:34,701 | INFO     | sufficient remaining disk space (406946054144 B)
[2025-07-20 05:31:52] 2025-07-20 04:31:34,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-20 05:31:52] 2025-07-20 04:31:34,701 | INFO     | current server update state: UPDATING_FINAL
[2025-07-20 05:31:52] 2025-07-20 04:31:34,701 | INFO     | update_server=False
[2025-07-20 05:31:52] 2025-07-20 04:31:34,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-20 05:31:52] 2025-07-20 04:31:34,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-20 05:31:52] 2025-07-20 04:31:34,702 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-20 05:31:52] 2025-07-20 04:31:34,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-20 05:31:52] 2025-07-20 04:31:34,702 | INFO     | found 0 job(s) in 20 queues
[2025-07-20 05:31:52] 2025-07-20 04:31:34,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-20 05:31:52] 2025-07-20 04:31:34,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-20 05:31:52] 2025-07-20 04:31:34,720 | INFO     | all data control threads have been joined
[2025-07-20 05:31:52] 2025-07-20 04:31:35,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-20 05:31:52] 2025-07-20 04:31:35,526 | INFO     | all job control threads have been joined
[2025-07-20 05:31:52] 2025-07-20 04:31:35,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-20 05:31:52] 2025-07-20 04:31:35,645 | INFO     | aborting loop
[2025-07-20 05:31:52] 2025-07-20 04:31:35,707 | INFO     | [job] retrieve thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:35,709 | INFO     | [job] queue monitor thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:35,726 | INFO     | [data] control thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:35,820 | INFO     | all payload control threads have been joined
[2025-07-20 05:31:52] 2025-07-20 04:31:35,928 | INFO     | [payload] validate_post thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:36,080 | INFO     | [payload] execute_payloads thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:36,325 | INFO     | [data] copytool_in thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:36,520 | INFO     | [job] validate thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:36,532 | INFO     | [job] control thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:36,651 | INFO     | [job] job monitor thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:36,739 | INFO     | [job] create_data_payload thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:36,826 | INFO     | [payload] control thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:36,851 | INFO     | [payload] failed_post thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:37,051 | INFO     | [payload] validate_pre thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:37,456 | INFO     | [data] copytool_out thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:38,709 | INFO     | [data] queue_monitor thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:45,468 | INFO     | job.realtimelogging is not enabled
[2025-07-20 05:31:52] 2025-07-20 04:31:46,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-20 05:31:52] 2025-07-20 04:31:47,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140373188343616)>', '<ExcThread(monitor, started 140372600674048)>']
[2025-07-20 05:31:52] 2025-07-20 04:31:47,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-20 05:31:52] 2025-07-20 04:31:47,772 | INFO     | [monitor] control thread has ended
[2025-07-20 05:31:52] 2025-07-20 04:31:52,322 | INFO     | all workflow threads have been joined
[2025-07-20 05:31:52] 2025-07-20 04:31:52,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-20 05:31:52] 2025-07-20 04:31:52,323 | INFO     | traces error code: 0
[2025-07-20 05:31:52] 2025-07-20 04:31:52,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-20 05:31:52] 2025-07-20 04:31:52,440 [wrapper] ==== pilot stdout END ====
[2025-07-20 05:31:52] 2025-07-20 04:31:52,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-20 05:31:52] 2025-07-20 04:31:52,443 [wrapper] pilotpid: 8004
[2025-07-20 05:31:52] 2025-07-20 04:31:52,445 [wrapper] Pilot exit status: 0
[2025-07-20 05:31:52] 2025-07-20 04:31:52,456 [wrapper] pandaids: 6739271751
[2025-07-20 05:31:52] 2025-07-20 04:31:52,471 [wrapper] cleanup supervisor_pilot  7090 8005
[2025-07-20 05:31:52] 2025-07-20 04:31:52,473 [wrapper] Test setup, not cleaning
[2025-07-20 05:31:52] 2025-07-20 04:31:52,475 [wrapper] apfmon messages muted
[2025-07-20 05:31:52] 2025-07-20 04:31:52,477 [wrapper] ==== wrapper stdout END ====
[2025-07-20 05:31:52] 2025-07-20 04:31:52,479 [wrapper] ==== wrapper stderr END ====
[2025-07-20 05:31:52]  *** Error codes and diagnostics ***
[2025-07-20 05:31:52]     "exeErrorCode": 0,
[2025-07-20 05:31:52]     "exeErrorDiag": "",
[2025-07-20 05:31:52]     "pilotErrorCode": 0,
[2025-07-20 05:31:52]     "pilotErrorDiag": "",
[2025-07-20 05:31:52]  *** Listing of results directory ***
[2025-07-20 05:31:52] total 515728
[2025-07-20 05:31:52] -rw-r--r-- 1 m m    530466 Jul 20 00:57 pilot3.tar.gz
[2025-07-20 05:31:52] -rw-r--r-- 1 m m      5112 Jul 20 01:00 queuedata.json
[2025-07-20 05:31:52] -rwx------ 1 m m     36292 Jul 20 01:00 runpilot2-wrapper.sh
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m       100 Jul 20 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-20 05:31:52] -rwxr-xr-x 1 m m      7986 Jul 20 01:37 run_atlas
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m       105 Jul 20 01:37 job.xml
[2025-07-20 05:31:52] -rw-r--r-- 2 m m     15095 Jul 20 01:37 start_atlas.sh
[2025-07-20 05:31:52] drwxrwx--x 2 m m      4096 Jul 20 01:37 shared
[2025-07-20 05:31:52] -rw-r--r-- 2 m m    542872 Jul 20 01:37 input.tar.gz
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m      6014 Jul 20 01:37 init_data.xml
[2025-07-20 05:31:52] -rw-r--r-- 2 m m 301387063 Jul 20 01:37 EVNT.45668886._000005.pool.root.1
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m         0 Jul 20 01:37 boinc_lockfile
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m      2534 Jul 20 01:38 pandaJob.out
[2025-07-20 05:31:52] -rw------- 1 m m    978446 Jul 20 01:38 agis_schedconf.cvmfs.json
[2025-07-20 05:31:52] drwx------ 4 m m      4096 Jul 20 01:38 pilot3
[2025-07-20 05:31:52] -rw------- 1 m m 219670570 Jul 20 05:30 HITS.45668889._000110.pool.root.1
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m       530 Jul 20 05:30 boinc_task_state.xml
[2025-07-20 05:31:52] -rw------- 1 m m        95 Jul 20 05:31 pilot_heartbeat.json
[2025-07-20 05:31:52] -rw------- 1 m m      1034 Jul 20 05:31 memory_monitor_summary.json
[2025-07-20 05:31:52] -rw------- 1 m m   1593055 Jul 20 05:31 agis_ddmendpoints.agis.ALL.json
[2025-07-20 05:31:52] -rw------- 1 m m    325225 Jul 20 05:31 log.45668889._000110.job.log.tgz.1
[2025-07-20 05:31:52] -rw------- 1 m m      7783 Jul 20 05:31 heartbeat.json
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m      8192 Jul 20 05:31 boinc_mmap_file
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m        28 Jul 20 05:31 wrapper_checkpoint.txt
[2025-07-20 05:31:52] -rw------- 1 m m      4552 Jul 20 05:31 pilotlog.txt
[2025-07-20 05:31:52] -rw------- 1 m m   1260353 Jul 20 05:31 log.45668889._000110.job.log.1
[2025-07-20 05:31:52] -rw------- 1 m m       357 Jul 20 05:31 output.list
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m       620 Jul 20 05:31 runtime_log
[2025-07-20 05:31:52] -rw------- 1 m m   1607680 Jul 20 05:31 result.tar.gz
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m      8575 Jul 20 05:31 runtime_log.err
[2025-07-20 05:31:52] -rw------- 1 m m       645 Jul 20 05:31 a5IODmkeWx7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpbsKDmsAsbnm.diag
[2025-07-20 05:31:52] -rw-rw-r-- 1 m m     20712 Jul 20 05:31 stderr.txt
[2025-07-20 05:31:52] HITS file was successfully produced:
[2025-07-20 05:31:52] -rw------- 1 m m 219670570 Jul 20 05:30 shared/HITS.pool.root.1
[2025-07-20 05:31:52]  *** Contents of shared directory: ***
[2025-07-20 05:31:52] total 510972
[2025-07-20 05:31:52] -rw-r--r-- 2 m m     15095 Jul 20 01:37 start_atlas.sh
[2025-07-20 05:31:52] -rw-r--r-- 2 m m    542872 Jul 20 01:37 input.tar.gz
[2025-07-20 05:31:52] -rw-r--r-- 2 m m 301387063 Jul 20 01:37 ATLAS.root_0
[2025-07-20 05:31:52] -rw------- 1 m m 219670570 Jul 20 05:30 HITS.pool.root.1
[2025-07-20 05:31:52] -rw------- 1 m m   1607680 Jul 20 05:31 result.tar.gz
05:31:53 (3759): run_atlas exited; CPU time 53576.596425
05:31:53 (3759): called boinc_finish(0)

</stderr_txt>
]]>

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