Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:48:03 (17549): wrapper (7.7.26015): starting
17:48:03 (17549): wrapper: running run_atlas (--nthreads 8)
[2025-07-19 17:48:03] Arguments: --nthreads 8
[2025-07-19 17:48:03] Threads: 8
[2025-07-19 17:48:03] Checking for CVMFS
[2025-07-19 17:48:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-19 17:48:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-19 17:48:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-19 17:48:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-19 17:48:05] 2.12.6.0 2935877 2109 288292 148519 2 449 35022808 40960001 29904 16776704 0 17397189 99.721 16327162 2363 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-19 17:48:05] CVMFS is ok
[2025-07-19 17:48:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-19 17:48:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-19 17:48:05] Further information can be found at the LHC@home message board.
[2025-07-19 17:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-19 17:48:05] Checking for apptainer binary...
[2025-07-19 17:48:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-19 17:48:05] Running /usr/bin/apptainer --version
[2025-07-19 17:48:05] apptainer version 1.4.1-1.el9
[2025-07-19 17:48:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-19 17:48:06] c7-2-17.aglt2.org
[2025-07-19 17:48:06] apptainer works
[2025-07-19 17:48:06] Set ATHENA_PROC_NUMBER=8
[2025-07-19 17:48:06] Set ATHENA_CORE_NUMBER=8
[2025-07-19 17:48:06] Starting ATLAS job with PandaID=6739113168
[2025-07-19 17:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-19 22:09:21]  *** The last 200 lines of the pilot log: ***
[2025-07-19 22:09:21] 2025-07-20 02:08:47,065 | INFO     | PID=24771 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-19 22:09:21] 2025-07-20 02:08:47,065 | INFO     | .. there are 63 such processes running
[2025-07-19 22:09:21] 2025-07-20 02:08:47,816 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-19 22:09:21] 2025-07-20 02:08:47,828 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3161.46415625
[2025-07-19 22:09:21] 2025-07-20 02:08:47,843 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6739113168/memory_monitor_summary.json (trf name=prmon)
[2025-07-19 22:09:21] 2025-07-20 02:08:47,843 | INFO     | extracted standard info from prmon json
[2025-07-19 22:09:21] 2025-07-20 02:08:47,843 | INFO     | extracted standard memory fields from prmon json
[2025-07-19 22:09:21] 2025-07-20 02:08:47,843 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-19 22:09:21] 2025-07-20 02:08:47,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-19 22:09:21] 2025-07-20 02:08:47,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-19 22:09:21] 2025-07-20 02:08:47,847 | INFO     | fitting pss+swap vs Time
[2025-07-19 22:09:21] 2025-07-20 02:08:47,847 | INFO     | sum of square deviations: 5081295463.247999
[2025-07-19 22:09:21] 2025-07-20 02:08:47,849 | INFO     | sum of deviations: 42206302735.59447
[2025-07-19 22:09:21] 2025-07-20 02:08:47,849 | INFO     | mean x: 1752969540.531496
[2025-07-19 22:09:21] 2025-07-20 02:08:47,849 | INFO     | mean y: 2129266.9881889764
[2025-07-19 22:09:21] 2025-07-20 02:08:47,849 | INFO     | -- intersect: -14558402323.641981
[2025-07-19 22:09:21] 2025-07-20 02:08:47,849 | INFO     | intersect: -14558402323.641981
[2025-07-19 22:09:21] 2025-07-20 02:08:47,849 | INFO     | chi2: 1.7717071362851406
[2025-07-19 22:09:21] 2025-07-20 02:08:47,850 | INFO     | sum of square deviations: 4787087735.742993
[2025-07-19 22:09:21] 2025-07-20 02:08:47,851 | INFO     | sum of deviations: 42152195236.357475
[2025-07-19 22:09:21] 2025-07-20 02:08:47,851 | INFO     | mean x: 1752969388.0321286
[2025-07-19 22:09:21] 2025-07-20 02:08:47,851 | INFO     | mean y: 2129234.080321285
[2025-07-19 22:09:21] 2025-07-20 02:08:47,851 | INFO     | -- intersect: -15433457487.252213
[2025-07-19 22:09:21] 2025-07-20 02:08:47,851 | INFO     | intersect: -15433457487.252213
[2025-07-19 22:09:21] 2025-07-20 02:08:47,852 | INFO     | chi2: 1.767945421771012
[2025-07-19 22:09:21] 2025-07-20 02:08:47,852 | INFO     | current chi2=1.767945421771012 (change=0.21232146312940298 %)
[2025-07-19 22:09:21] 2025-07-20 02:08:47,852 | INFO     | right removable region: 248
[2025-07-19 22:09:21] 2025-07-20 02:08:47,852 | INFO     | sum of square deviations: 4787082855.742992
[2025-07-19 22:09:21] 2025-07-20 02:08:47,853 | INFO     | sum of deviations: 2611103125.742971
[2025-07-19 22:09:21] 2025-07-20 02:08:47,853 | INFO     | mean x: 1752969693.0321286
[2025-07-19 22:09:21] 2025-07-20 02:08:47,854 | INFO     | mean y: 2149652.0321285143
[2025-07-19 22:09:21] 2025-07-20 02:08:47,854 | INFO     | -- intersect: -954003559.16991
[2025-07-19 22:09:21] 2025-07-20 02:08:47,854 | INFO     | intersect: -954003559.16991
[2025-07-19 22:09:21] 2025-07-20 02:08:47,854 | INFO     | chi2: 0.11232820113626321
[2025-07-19 22:09:21] 2025-07-20 02:08:47,854 | INFO     | current chi2=0.11232820113626321 (change=93.65988888142148 %)
[2025-07-19 22:09:21] 2025-07-20 02:08:47,854 | INFO     | sum of square deviations: 4504451860.7376795
[2025-07-19 22:09:21] 2025-07-20 02:08:47,856 | INFO     | sum of deviations: 5145346533.286886
[2025-07-19 22:09:21] 2025-07-20 02:08:47,856 | INFO     | mean x: 1752969845.5327868
[2025-07-19 22:09:21] 2025-07-20 02:08:47,856 | INFO     | mean y: 2148284.151639344
[2025-07-19 22:09:21] 2025-07-20 02:08:47,856 | INFO     | -- intersect: -2000234602.0518456
[2025-07-19 22:09:21] 2025-07-20 02:08:47,856 | INFO     | intersect: -2000234602.0518456
[2025-07-19 22:09:21] 2025-07-20 02:08:47,856 | INFO     | chi2: 0.1037479133563998
[2025-07-19 22:09:21] 2025-07-20 02:08:47,856 | INFO     | current chi2=0.1037479133563998 (change=7.638587365478087 %)
[2025-07-19 22:09:21] 2025-07-20 02:08:47,856 | INFO     | left removable region: 20
[2025-07-19 22:09:21] 2025-07-20 02:08:47,857 | INFO     | sum of square deviations: 3675159054.8421106
[2025-07-19 22:09:21] 2025-07-20 02:08:47,858 | INFO     | sum of deviations: 8388410424.3157835
[2025-07-19 22:09:21] 2025-07-20 02:08:47,858 | INFO     | mean x: 1752969967.5263157
[2025-07-19 22:09:21] 2025-07-20 02:08:47,858 | INFO     | mean y: 2147520.5307017546
[2025-07-19 22:09:21] 2025-07-20 02:08:47,858 | INFO     | -- intersect: -3998939596.9741964
[2025-07-19 22:09:21] 2025-07-20 02:08:47,858 | INFO     | intersect: -3998939596.9741964
[2025-07-19 22:09:21] 2025-07-20 02:08:47,859 | INFO     | chi2: 0.07891633633836288
[2025-07-19 22:09:21] 2025-07-20 02:08:47,859 | INFO     | -- intersect: -3998939596.9741964
[2025-07-19 22:09:21] 2025-07-20 02:08:47,859 | INFO     | current memory leak: 2.28 B/s (using 228 data points, chi2=0.08)
[2025-07-19 22:09:21] 2025-07-20 02:08:47,859 | INFO     | could have reported an average CPU frequency of 3186 MHz (12 samples)
[2025-07-19 22:09:21] 2025-07-20 02:08:47,859 | INFO     | ..............................
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | . Timing measurements:
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | . get job = 0 s
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | . initial setup = 5 s
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | . payload setup = 26 s
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | . stage-in = 0 s
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | . payload execution = 15505 s
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | . stage-out = 3 s
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | . log creation = 0 s
[2025-07-19 22:09:21] 2025-07-20 02:08:47,860 | INFO     | ..............................
[2025-07-19 22:09:21] 2025-07-20 02:08:47,976 | INFO     | 
[2025-07-19 22:09:21] 2025-07-20 02:08:47,976 | INFO     | job summary report
[2025-07-19 22:09:21] 2025-07-20 02:08:47,976 | INFO     | --------------------------------------------------
[2025-07-19 22:09:21] 2025-07-20 02:08:47,976 | INFO     | PanDA job id: 6739113168
[2025-07-19 22:09:21] 2025-07-20 02:08:47,976 | INFO     | task id: 45668738
[2025-07-19 22:09:21] 2025-07-20 02:08:47,976 | INFO     | errors: (none)
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | pilot state: finished 
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | transexitcode: 0
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | exeerrorcode: 0
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | exeerrordiag: 
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | exitcode: 0
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | exitmsg: OK
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | cpuconsumptiontime: 44277 s
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | nevents: 400
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | neventsw: 0
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | pid: 48425
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | pgrp: 48425
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | corecount: 8
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | event service: False
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | sizes: {0: 2397400, 11: 2397400, 21: 2397690, 22: 2397718, 15536: 2428721, 15540: 2437719, 15541: 2437903, 15552: 2438097}
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | --------------------------------------------------
[2025-07-19 22:09:21] 2025-07-20 02:08:47,977 | INFO     | 
[2025-07-19 22:09:21] 2025-07-20 02:08:47,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-19 22:09:21] 2025-07-20 02:08:48,056 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | job 6739113168 has completed (purged errors)
[2025-07-19 22:09:21] 2025-07-20 02:08:48,058 | INFO     | overall cleanup function is called
[2025-07-19 22:09:21] 2025-07-20 02:08:49,067 | INFO     | --- collectZombieJob: --- 10, [48425]
[2025-07-19 22:09:21] 2025-07-20 02:08:49,067 | INFO     | zombie collector waiting for pid 48425
[2025-07-19 22:09:21] 2025-07-20 02:08:49,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-19 22:09:21] 2025-07-20 02:08:49,067 | INFO     | collected zombie processes
[2025-07-19 22:09:21] 2025-07-20 02:08:49,068 | INFO     | will attempt to kill all subprocesses of pid=48425
[2025-07-19 22:09:21] 2025-07-20 02:08:49,711 | INFO     | process IDs to be killed: [48425] (in reverse order)
[2025-07-19 22:09:21] 2025-07-20 02:08:49,995 | WARNING  | found no corresponding commands to process id(s)
[2025-07-19 22:09:21] 2025-07-20 02:08:49,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-19 22:09:21] 2025-07-20 02:08:50,061 | INFO     | did not find any defunct processes belonging to 48425
[2025-07-19 22:09:21] 2025-07-20 02:08:50,088 | INFO     | did not find any defunct processes belonging to 48425
[2025-07-19 22:09:21] 2025-07-20 02:08:50,088 | INFO     | ready for new job
[2025-07-19 22:09:21] 2025-07-20 02:08:50,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-19 22:09:21] 2025-07-20 02:08:50,090 | INFO     | ***************************************
[2025-07-19 22:09:21] 2025-07-20 02:08:50,090 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-19 22:09:21] 2025-07-20 02:08:50,090 | INFO     | ***************************************
[2025-07-19 22:09:21] 2025-07-20 02:08:50,090 | INFO     | 
[2025-07-19 22:09:21] 2025-07-20 02:08:50,113 | INFO     | architecture information:
[2025-07-19 22:09:21] 2025-07-20 02:08:50,113 | INFO     | executing command: cat /etc/os-release
[2025-07-19 22:09:21] 2025-07-20 02:08:50,169 | INFO     | cat /etc/os-release:
[2025-07-19 22:09:21] NAME="CentOS Linux"
[2025-07-19 22:09:21] VERSION="7 (Core)"
[2025-07-19 22:09:21] ID="centos"
[2025-07-19 22:09:21] ID_LIKE="rhel fedora"
[2025-07-19 22:09:21] VERSION_ID="7"
[2025-07-19 22:09:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-19 22:09:21] ANSI_COLOR="0;31"
[2025-07-19 22:09:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-19 22:09:21] HOME_URL="https://www.centos.org/"
[2025-07-19 22:09:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-19 22:09:21] 
[2025-07-19 22:09:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-19 22:09:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-19 22:09:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-19 22:09:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-19 22:09:21] 
[2025-07-19 22:09:21] 2025-07-20 02:08:50,169 | INFO     | ***************************************
[2025-07-19 22:09:21] 2025-07-20 02:08:50,676 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-19 22:09:21] 2025-07-20 02:08:50,774 | INFO     | sufficient remaining disk space (128122355712 B)
[2025-07-19 22:09:21] 2025-07-20 02:08:50,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-19 22:09:21] 2025-07-20 02:08:50,775 | INFO     | current server update state: UPDATING_FINAL
[2025-07-19 22:09:21] 2025-07-20 02:08:50,775 | INFO     | update_server=False
[2025-07-19 22:09:21] 2025-07-20 02:08:50,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-19 22:09:21] 2025-07-20 02:08:50,957 | INFO     | all job control threads have been joined
[2025-07-19 22:09:21] 2025-07-20 02:08:51,042 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-19 22:09:21] 2025-07-20 02:08:51,042 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-19 22:09:21] 2025-07-20 02:08:51,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-19 22:09:21] 2025-07-20 02:08:51,043 | INFO     | will abort loop
[2025-07-19 22:09:21] 2025-07-20 02:08:51,345 | INFO     | all data control threads have been joined
[2025-07-19 22:09:21] 2025-07-20 02:08:51,395 | INFO     | all payload control threads have been joined
[2025-07-19 22:09:21] 2025-07-20 02:08:51,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-19 22:09:21] 2025-07-20 02:08:51,781 | INFO     | [job] retrieve thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:51,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-19 22:09:21] 2025-07-20 02:08:51,962 | INFO     | [job] control thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,048 | INFO     | [job] job monitor thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,085 | INFO     | [job] validate thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,248 | INFO     | [payload] failed_post thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,351 | INFO     | [data] control thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,401 | INFO     | [payload] control thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,663 | INFO     | [payload] execute_payloads thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,667 | INFO     | [data] copytool_in thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,794 | INFO     | [payload] validate_post thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,809 | INFO     | [job] create_data_payload thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:52,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-19 22:09:21] 2025-07-20 02:08:53,155 | INFO     | [payload] validate_pre thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:53,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:53,562 | INFO     | [data] copytool_out thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:54,010 | INFO     | [job] queue monitor thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:55,817 | INFO     | [data] queue_monitor thread has finished
[2025-07-19 22:09:21] 2025-07-20 02:08:56,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322991728448)>', '<ExcThread(monitor, started 140322269026048)>']
[2025-07-19 22:09:21] 2025-07-20 02:09:01,067 | INFO     | all workflow threads have been joined
[2025-07-19 22:09:21] 2025-07-20 02:09:01,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-19 22:09:21] 2025-07-20 02:09:01,068 | INFO     | traces error code: 0
[2025-07-19 22:09:21] 2025-07-20 02:09:01,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-19 22:09:21] 2025-07-20 02:09:20,341 | INFO     | PID=24771 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-19 22:09:21] 2025-07-20 02:09:20,341 | INFO     | .. there are 63 such processes running
[2025-07-19 22:09:21] 2025-07-20 02:09:20,342 | INFO     | found 0 job(s) in 20 queues
[2025-07-19 22:09:21] 2025-07-20 02:09:20,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-19 22:09:21] 2025-07-20 02:09:20,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-19 22:09:21] 2025-07-20 02:09:20,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-19 22:09:21] 2025-07-20 02:09:20,342 | INFO     | [monitor] control thread has ended
[2025-07-19 22:09:21] 2025-07-20 02:09:20,586 [wrapper] ==== pilot stdout END ====
[2025-07-19 22:09:21] 2025-07-20 02:09:20,590 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-19 22:09:21] 2025-07-20 02:09:20,592 [wrapper] pilotpid: 24771
[2025-07-19 22:09:21] 2025-07-20 02:09:20,594 [wrapper] Pilot exit status: 0
[2025-07-19 22:09:21] 2025-07-20 02:09:20,606 [wrapper] pandaids: 6739113168
[2025-07-19 22:09:21] 2025-07-20 02:09:20,745 [wrapper] cleanup supervisor_pilot 2257199 24772
[2025-07-19 22:09:21] 2025-07-20 02:09:20,749 [wrapper] Test setup, not cleaning
[2025-07-19 22:09:21] 2025-07-20 02:09:20,752 [wrapper] apfmon messages muted
[2025-07-19 22:09:21] 2025-07-20 02:09:20,754 [wrapper] ==== wrapper stdout END ====
[2025-07-19 22:09:21] 2025-07-20 02:09:20,757 [wrapper] ==== wrapper stderr END ====
[2025-07-19 22:09:21]  *** Error codes and diagnostics ***
[2025-07-19 22:09:21]     "exeErrorCode": 0,
[2025-07-19 22:09:21]     "exeErrorDiag": "",
[2025-07-19 22:09:21]     "pilotErrorCode": 0,
[2025-07-19 22:09:21]     "pilotErrorDiag": "",
[2025-07-19 22:09:21]  *** Listing of results directory ***
[2025-07-19 22:09:21] total 527280
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas    530466 Jul 19 17:46 pilot3.tar.gz
[2025-07-19 22:09:21] -rwx------. 1 boincer umatlas     36292 Jul 19 17:47 runpilot2-wrapper.sh
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas      5112 Jul 19 17:47 queuedata.json
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas       100 Jul 19 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-19 22:09:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 19 17:48 run_atlas
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas       105 Jul 19 17:48 job.xml
[2025-07-19 22:09:21] -rw-r--r--. 2 boincer umatlas 304480826 Jul 19 17:48 EVNT.45668735._000003.pool.root.1
[2025-07-19 22:09:21] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 17:48 start_atlas.sh
[2025-07-19 22:09:21] drwxrwx--x. 2 boincer umatlas      4096 Jul 19 17:48 shared
[2025-07-19 22:09:21] -rw-r--r--. 2 boincer umatlas    542864 Jul 19 17:48 input.tar.gz
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas         0 Jul 19 17:48 boinc_lockfile
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas      2509 Jul 19 17:48 pandaJob.out
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas    978446 Jul 19 17:48 agis_schedconf.cvmfs.json
[2025-07-19 22:09:21] drwx------. 4 boincer umatlas      4096 Jul 19 17:48 pilot3
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas      6934 Jul 19 22:04 init_data.xml
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas 228426876 Jul 19 22:07 HITS.45668738._000127.pool.root.1
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas       530 Jul 19 22:07 boinc_task_state.xml
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas      1047 Jul 19 22:08 memory_monitor_summary.json
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas   1593055 Jul 19 22:08 agis_ddmendpoints.agis.ALL.json
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas    386722 Jul 19 22:08 log.45668738._000127.job.log.tgz.1
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas      7764 Jul 19 22:08 heartbeat.json
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas        95 Jul 19 22:09 pilot_heartbeat.json
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas       821 Jul 19 22:09 pilotlog.txt
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas   1188558 Jul 19 22:09 log.45668738._000127.job.log.1
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas      8192 Jul 19 22:09 boinc_mmap_file
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas       357 Jul 19 22:09 output.list
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas        28 Jul 19 22:09 wrapper_checkpoint.txt
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas       620 Jul 19 22:09 runtime_log
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas   1597440 Jul 19 22:09 result.tar.gz
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas       659 Jul 19 22:09 x9PKDmkZUx7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMYsKDmuBjqTm.diag
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas      8656 Jul 19 22:09 runtime_log.err
[2025-07-19 22:09:21] -rw-r--r--. 1 boincer umatlas     21260 Jul 19 22:09 stderr.txt
[2025-07-19 22:09:21] HITS file was successfully produced:
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas 228426876 Jul 19 22:07 shared/HITS.pool.root.1
[2025-07-19 22:09:21]  *** Contents of shared directory: ***
[2025-07-19 22:09:21] total 522536
[2025-07-19 22:09:21] -rw-r--r--. 2 boincer umatlas 304480826 Jul 19 17:48 ATLAS.root_0
[2025-07-19 22:09:21] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 17:48 start_atlas.sh
[2025-07-19 22:09:21] -rw-r--r--. 2 boincer umatlas    542864 Jul 19 17:48 input.tar.gz
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas 228426876 Jul 19 22:07 HITS.pool.root.1
[2025-07-19 22:09:21] -rw-------. 1 boincer umatlas   1597440 Jul 19 22:09 result.tar.gz
22:09:23 (17549): run_atlas exited; CPU time 44983.166573
22:09:23 (17549): called boinc_finish(0)

</stderr_txt>
]]>

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