Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:41:14 (1183616): wrapper (7.7.26015): starting
17:41:14 (1183616): wrapper: running run_atlas (--nthreads 8)
[2025-07-14 17:41:14] Arguments: --nthreads 8
[2025-07-14 17:41:14] Threads: 8
[2025-07-14 17:41:14] Checking for CVMFS
[2025-07-14 17:41:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 17:41:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 17:41:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 17:41:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 17:41:15] 2.12.6.0 557484 213 136416 148332 2 85 28298699 32935936 14159 16776704 0 636882 97.660 4490716 48599 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-14 17:41:15] CVMFS is ok
[2025-07-14 17:41:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-14 17:41:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-14 17:41:15] Further information can be found at the LHC@home message board.
[2025-07-14 17:41:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 17:41:15] Checking for apptainer binary...
[2025-07-14 17:41:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-14 17:41:15] Running /usr/bin/apptainer --version
[2025-07-14 17:41:15] apptainer version 1.4.1-1.el9
[2025-07-14 17:41:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 17:41:15] c7-3-34.aglt2.org
[2025-07-14 17:41:15] apptainer works
[2025-07-14 17:41:15] Set ATHENA_PROC_NUMBER=8
[2025-07-14 17:41:15] Set ATHENA_CORE_NUMBER=8
[2025-07-14 17:41:15] Starting ATLAS job with PandaID=6720782487
[2025-07-14 17:41:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-14 19:35:25]  *** The last 200 lines of the pilot log: ***
[2025-07-14 19:35:25] 2025-07-14 23:34:50,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-14 19:35:25] 2025-07-14 23:34:50,244 | INFO     | PID=1188098 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-14 19:35:25] 2025-07-14 23:34:50,245 | INFO     | .. there are 13 such processes running
[2025-07-14 19:35:25] 2025-07-14 23:34:51,891 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-14 19:35:25] 2025-07-14 23:34:51,897 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3089.801166666666
[2025-07-14 19:35:25] 2025-07-14 23:34:51,913 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720782487/memory_monitor_summary.json (trf name=prmon)
[2025-07-14 19:35:25] 2025-07-14 23:34:51,913 | INFO     | extracted standard info from prmon json
[2025-07-14 19:35:25] 2025-07-14 23:34:51,914 | INFO     | extracted standard memory fields from prmon json
[2025-07-14 19:35:25] 2025-07-14 23:34:51,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-14 19:35:25] 2025-07-14 23:34:51,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-14 19:35:25] 2025-07-14 23:34:51,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-14 19:35:25] 2025-07-14 23:34:51,917 | INFO     | fitting pss+swap vs Time
[2025-07-14 19:35:25] 2025-07-14 23:34:51,917 | INFO     | sum of square deviations: 424045160.0
[2025-07-14 19:35:25] 2025-07-14 23:34:51,918 | INFO     | sum of deviations: -6457605240.999994
[2025-07-14 19:35:25] 2025-07-14 23:34:51,918 | INFO     | mean x: 1752532671.0
[2025-07-14 19:35:25] 2025-07-14 23:34:51,918 | INFO     | mean y: 2334683.5585585586
[2025-07-14 19:35:25] 2025-07-14 23:34:51,918 | INFO     | -- intersect: 26690917006.425583
[2025-07-14 19:35:25] 2025-07-14 23:34:51,918 | INFO     | intersect: 26690917006.425583
[2025-07-14 19:35:25] 2025-07-14 23:34:51,918 | INFO     | chi2: 1.6929398299937497
[2025-07-14 19:35:25] 2025-07-14 23:34:51,918 | INFO     | sum of square deviations: 369281342.5
[2025-07-14 19:35:25] 2025-07-14 23:34:51,919 | INFO     | sum of deviations: -5257237481.000001
[2025-07-14 19:35:25] 2025-07-14 23:34:51,919 | INFO     | mean x: 1752532518.5
[2025-07-14 19:35:25] 2025-07-14 23:34:51,919 | INFO     | mean y: 2337995.3396226414
[2025-07-14 19:35:25] 2025-07-14 23:34:51,919 | INFO     | -- intersect: 24952094678.293427
[2025-07-14 19:35:25] 2025-07-14 23:34:51,919 | INFO     | intersect: 24952094678.293427
[2025-07-14 19:35:25] 2025-07-14 23:34:51,919 | INFO     | chi2: 1.6925955203935903
[2025-07-14 19:35:25] 2025-07-14 23:34:51,920 | INFO     | current chi2=1.6925955203935903 (change=0.020337970319989487 %)
[2025-07-14 19:35:25] 2025-07-14 23:34:51,920 | INFO     | right removable region: 105
[2025-07-14 19:35:25] 2025-07-14 23:34:51,920 | INFO     | sum of square deviations: 369281342.5
[2025-07-14 19:35:25] 2025-07-14 23:34:51,920 | INFO     | sum of deviations: -21312232276.999992
[2025-07-14 19:35:25] 2025-07-14 23:34:51,921 | INFO     | mean x: 1752532823.5
[2025-07-14 19:35:25] 2025-07-14 23:34:51,921 | INFO     | mean y: 2375288.1886792453
[2025-07-14 19:35:25] 2025-07-14 23:34:51,921 | INFO     | -- intersect: 101145818806.45586
[2025-07-14 19:35:25] 2025-07-14 23:34:51,921 | INFO     | intersect: 101145818806.45586
[2025-07-14 19:35:25] 2025-07-14 23:34:51,921 | INFO     | chi2: 0.27698170167892916
[2025-07-14 19:35:25] 2025-07-14 23:34:51,921 | INFO     | current chi2=0.27698170167892916 (change=83.63901086313554 %)
[2025-07-14 19:35:25] 2025-07-14 23:34:51,921 | INFO     | sum of square deviations: 319447850.0
[2025-07-14 19:35:25] 2025-07-14 23:34:51,922 | INFO     | sum of deviations: -20951361157.0
[2025-07-14 19:35:25] 2025-07-14 23:34:51,922 | INFO     | mean x: 1752532976.0
[2025-07-14 19:35:25] 2025-07-14 23:34:51,922 | INFO     | mean y: 2373980.5148514854
[2025-07-14 19:35:25] 2025-07-14 23:34:51,922 | INFO     | -- intersect: 114944300557.03748
[2025-07-14 19:35:25] 2025-07-14 23:34:51,922 | INFO     | intersect: 114944300557.03748
[2025-07-14 19:35:25] 2025-07-14 23:34:51,922 | INFO     | chi2: 0.22933015468908569
[2025-07-14 19:35:25] 2025-07-14 23:34:51,922 | INFO     | current chi2=0.22933015468908569 (change=17.20386101356257 %)
[2025-07-14 19:35:25] 2025-07-14 23:34:51,922 | INFO     | left removable region: 20
[2025-07-14 19:35:25] 2025-07-14 23:34:51,923 | INFO     | sum of square deviations: 190403570.0
[2025-07-14 19:35:25] 2025-07-14 23:34:51,923 | INFO     | sum of deviations: -11702342784.999998
[2025-07-14 19:35:25] 2025-07-14 23:34:51,923 | INFO     | mean x: 1752533098.0
[2025-07-14 19:35:25] 2025-07-14 23:34:51,923 | INFO     | mean y: 2350509.8352941177
[2025-07-14 19:35:25] 2025-07-14 23:34:51,923 | INFO     | -- intersect: 107714317543.08995
[2025-07-14 19:35:25] 2025-07-14 23:34:51,923 | INFO     | intersect: 107714317543.08995
[2025-07-14 19:35:25] 2025-07-14 23:34:51,923 | INFO     | chi2: 0.2021418085018662
[2025-07-14 19:35:25] 2025-07-14 23:34:51,923 | INFO     | -- intersect: 107714317543.08995
[2025-07-14 19:35:25] 2025-07-14 23:34:51,924 | INFO     | current memory leak: -61.46 B/s (using 85 data points, chi2=0.20)
[2025-07-14 19:35:25] 2025-07-14 23:34:51,924 | INFO     | could have reported an average CPU frequency of 3125 MHz (7 samples)
[2025-07-14 19:35:25] 2025-07-14 23:34:51,924 | INFO     | ..............................
[2025-07-14 19:35:25] 2025-07-14 23:34:51,924 | INFO     | . Timing measurements:
[2025-07-14 19:35:25] 2025-07-14 23:34:51,924 | INFO     | . get job = 0 s
[2025-07-14 19:35:25] 2025-07-14 23:34:51,925 | INFO     | . initial setup = 3 s
[2025-07-14 19:35:25] 2025-07-14 23:34:51,925 | INFO     | . payload setup = 7 s
[2025-07-14 19:35:25] 2025-07-14 23:34:51,925 | INFO     | . stage-in = 0 s
[2025-07-14 19:35:25] 2025-07-14 23:34:51,925 | INFO     | . payload execution = 6758 s
[2025-07-14 19:35:25] 2025-07-14 23:34:51,925 | INFO     | . stage-out = 1 s
[2025-07-14 19:35:25] 2025-07-14 23:34:51,925 | INFO     | . log creation = 0 s
[2025-07-14 19:35:25] 2025-07-14 23:34:51,925 | INFO     | ..............................
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | 
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | job summary report
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | --------------------------------------------------
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | PanDA job id: 6720782487
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | task id: 45482062
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | errors: (none)
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | pilot state: finished 
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | transexitcode: 0
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | exeerrorcode: 0
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | exeerrordiag: 
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | exitcode: 0
[2025-07-14 19:35:25] 2025-07-14 23:34:52,081 | INFO     | exitmsg: OK
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | cpuconsumptiontime: 45280 s
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | nevents: 400
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | neventsw: 0
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | pid: 1195088
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | pgrp: 1195088
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | corecount: 8
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | event service: False
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | sizes: {0: 2393483, 5: 2393745, 11: 2393801, 6768: 2420853, 6769: 2420852, 6770: 2429906, 6772: 2430090, 6788: 2430284}
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | --------------------------------------------------
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | 
[2025-07-14 19:35:25] 2025-07-14 23:34:52,082 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-14 19:35:25] 2025-07-14 23:34:52,105 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | job 6720782487 has completed (purged errors)
[2025-07-14 19:35:25] 2025-07-14 23:34:52,107 | INFO     | overall cleanup function is called
[2025-07-14 19:35:25] 2025-07-14 23:34:53,116 | INFO     | --- collectZombieJob: --- 10, [1195088]
[2025-07-14 19:35:25] 2025-07-14 23:34:53,117 | INFO     | zombie collector waiting for pid 1195088
[2025-07-14 19:35:25] 2025-07-14 23:34:53,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-14 19:35:25] 2025-07-14 23:34:53,117 | INFO     | collected zombie processes
[2025-07-14 19:35:25] 2025-07-14 23:34:53,117 | INFO     | will attempt to kill all subprocesses of pid=1195088
[2025-07-14 19:35:25] 2025-07-14 23:34:53,474 | INFO     | process IDs to be killed: [1195088] (in reverse order)
[2025-07-14 19:35:25] 2025-07-14 23:34:53,608 | WARNING  | found no corresponding commands to process id(s)
[2025-07-14 19:35:25] 2025-07-14 23:34:53,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-14 19:35:25] 2025-07-14 23:34:53,634 | INFO     | did not find any defunct processes belonging to 1195088
[2025-07-14 19:35:25] 2025-07-14 23:34:53,662 | INFO     | did not find any defunct processes belonging to 1195088
[2025-07-14 19:35:25] 2025-07-14 23:34:53,663 | INFO     | ready for new job
[2025-07-14 19:35:25] 2025-07-14 23:34:53,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-14 19:35:25] 2025-07-14 23:34:53,665 | INFO     | ***************************************
[2025-07-14 19:35:25] 2025-07-14 23:34:53,665 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-14 19:35:25] 2025-07-14 23:34:53,665 | INFO     | ***************************************
[2025-07-14 19:35:25] 2025-07-14 23:34:53,669 | INFO     | 
[2025-07-14 19:35:25] 2025-07-14 23:34:53,692 | INFO     | architecture information:
[2025-07-14 19:35:25] 2025-07-14 23:34:53,692 | INFO     | executing command: cat /etc/os-release
[2025-07-14 19:35:25] 2025-07-14 23:34:53,722 | INFO     | cat /etc/os-release:
[2025-07-14 19:35:25] NAME="CentOS Linux"
[2025-07-14 19:35:25] VERSION="7 (Core)"
[2025-07-14 19:35:25] ID="centos"
[2025-07-14 19:35:25] ID_LIKE="rhel fedora"
[2025-07-14 19:35:25] VERSION_ID="7"
[2025-07-14 19:35:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-14 19:35:25] ANSI_COLOR="0;31"
[2025-07-14 19:35:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-14 19:35:25] HOME_URL="https://www.centos.org/"
[2025-07-14 19:35:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-14 19:35:25] 
[2025-07-14 19:35:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-14 19:35:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-14 19:35:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-14 19:35:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-14 19:35:25] 
[2025-07-14 19:35:25] 2025-07-14 23:34:53,722 | INFO     | ***************************************
[2025-07-14 19:35:25] 2025-07-14 23:34:54,226 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-14 19:35:25] 2025-07-14 23:34:54,246 | INFO     | sufficient remaining disk space (76337381376 B)
[2025-07-14 19:35:25] 2025-07-14 23:34:54,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-14 19:35:25] 2025-07-14 23:34:54,246 | INFO     | current server update state: UPDATING_FINAL
[2025-07-14 19:35:25] 2025-07-14 23:34:54,246 | INFO     | update_server=False
[2025-07-14 19:35:25] 2025-07-14 23:34:54,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-14 19:35:25] 2025-07-14 23:34:54,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-14 19:35:25] 2025-07-14 23:34:54,248 | INFO     | aborting loop
[2025-07-14 19:35:25] 2025-07-14 23:34:54,891 | INFO     | all job control threads have been joined
[2025-07-14 19:35:25] 2025-07-14 23:34:54,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-14 19:35:25] 2025-07-14 23:34:55,068 | INFO     | all payload control threads have been joined
[2025-07-14 19:35:25] 2025-07-14 23:34:55,252 | INFO     | [job] retrieve thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:55,254 | INFO     | [job] job monitor thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:55,281 | INFO     | all data control threads have been joined
[2025-07-14 19:35:25] 2025-07-14 23:34:55,431 | INFO     | [job] validate thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:55,604 | INFO     | [payload] failed_post thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:55,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-14 19:35:25] 2025-07-14 23:34:55,898 | INFO     | [job] control thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:56,073 | INFO     | [payload] control thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:56,099 | INFO     | [payload] validate_pre thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:56,101 | INFO     | [payload] execute_payloads thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:56,203 | INFO     | [payload] validate_post thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:56,286 | INFO     | [data] control thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:56,455 | INFO     | [job] create_data_payload thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:56,543 | INFO     | [data] copytool_in thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:56,966 | INFO     | [data] copytool_out thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:57,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-14 19:35:25] 2025-07-14 23:34:58,100 | INFO     | [job] queue monitor thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:34:59,776 | INFO     | [data] queue_monitor thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:35:04,298 | INFO     | job.realtimelogging is not enabled
[2025-07-14 19:35:25] 2025-07-14 23:35:05,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-14 19:35:25] 2025-07-14 23:35:06,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676476417856)>', '<ExcThread(monitor, started 139675540903680)>']
[2025-07-14 19:35:25] 2025-07-14 23:35:11,061 | INFO     | all workflow threads have been joined
[2025-07-14 19:35:25] 2025-07-14 23:35:11,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-14 19:35:25] 2025-07-14 23:35:11,062 | INFO     | traces error code: 0
[2025-07-14 19:35:25] 2025-07-14 23:35:11,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-14 19:35:25] 2025-07-14 23:35:24,766 | INFO     | PID=1188098 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 19:35:25] 2025-07-14 23:35:24,767 | INFO     | .. there are 13 such processes running
[2025-07-14 19:35:25] 2025-07-14 23:35:24,767 | INFO     | found 0 job(s) in 20 queues
[2025-07-14 19:35:25] 2025-07-14 23:35:24,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-14 19:35:25] 2025-07-14 23:35:24,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-14 19:35:25] 2025-07-14 23:35:24,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-14 19:35:25] 2025-07-14 23:35:24,767 | INFO     | [monitor] control thread has ended
[2025-07-14 19:35:25] 2025-07-14 23:35:25,184 [wrapper] ==== pilot stdout END ====
[2025-07-14 19:35:25] 2025-07-14 23:35:25,187 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-14 19:35:25] 2025-07-14 23:35:25,189 [wrapper] pilotpid: 1188098
[2025-07-14 19:35:25] 2025-07-14 23:35:25,191 [wrapper] Pilot exit status: 0
[2025-07-14 19:35:25] 2025-07-14 23:35:25,236 [wrapper] pandaids: 6720782487
[2025-07-14 19:35:25] 2025-07-14 23:35:25,365 [wrapper] cleanup supervisor_pilot 1448848 1188099
[2025-07-14 19:35:25] 2025-07-14 23:35:25,382 [wrapper] Test setup, not cleaning
[2025-07-14 19:35:25] 2025-07-14 23:35:25,391 [wrapper] apfmon messages muted
[2025-07-14 19:35:25] 2025-07-14 23:35:25,414 [wrapper] ==== wrapper stdout END ====
[2025-07-14 19:35:25] 2025-07-14 23:35:25,417 [wrapper] ==== wrapper stderr END ====
[2025-07-14 19:35:25]  *** Error codes and diagnostics ***
[2025-07-14 19:35:25]     "exeErrorCode": 0,
[2025-07-14 19:35:25]     "exeErrorDiag": "",
[2025-07-14 19:35:25]     "pilotErrorCode": 0,
[2025-07-14 19:35:25]     "pilotErrorDiag": "",
[2025-07-14 19:35:25]  *** Listing of results directory ***
[2025-07-14 19:35:25] total 579468
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas    530466 Jul  6 08:47 pilot3.tar.gz
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas      5112 Jul  6 08:56 queuedata.json
[2025-07-14 19:35:25] -rwx------. 1 boincer umatlas     36292 Jul  6 08:57 runpilot2-wrapper.sh
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas       100 Jul 14 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-14 19:35:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 14 17:41 run_atlas
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas       105 Jul 14 17:41 job.xml
[2025-07-14 19:35:25] -rw-r--r--. 2 boincer umatlas 321617265 Jul 14 17:41 EVNT.45482060._000412.pool.root.1
[2025-07-14 19:35:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 17:41 start_atlas.sh
[2025-07-14 19:35:25] drwxrwx--x. 2 boincer umatlas      4096 Jul 14 17:41 shared
[2025-07-14 19:35:25] -rw-r--r--. 2 boincer umatlas    542886 Jul 14 17:41 input.tar.gz
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas         0 Jul 14 17:41 boinc_lockfile
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas      2534 Jul 14 17:41 pandaJob.out
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas    976437 Jul 14 17:41 agis_schedconf.cvmfs.json
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas   1588641 Jul 14 17:41 agis_ddmendpoints.agis.ALL.json
[2025-07-14 19:35:25] drwx------. 4 boincer umatlas      4096 Jul 14 17:41 pilot3
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas      6930 Jul 14 19:30 init_data.xml
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas 265932234 Jul 14 19:33 HITS.45482062._010296.pool.root.1
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas       529 Jul 14 19:34 boinc_task_state.xml
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas      1029 Jul 14 19:34 memory_monitor_summary.json
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas        95 Jul 14 19:34 pilot_heartbeat.json
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas    338444 Jul 14 19:34 log.45482062._010296.job.log.tgz.1
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas      7775 Jul 14 19:34 heartbeat.json
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas      8192 Jul 14 19:35 boinc_mmap_file
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas        27 Jul 14 19:35 wrapper_checkpoint.txt
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas       823 Jul 14 19:35 pilotlog.txt
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas    640772 Jul 14 19:35 log.45482062._010296.job.log.1
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas       357 Jul 14 19:35 output.list
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas       620 Jul 14 19:35 runtime_log
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas   1003520 Jul 14 19:35 result.tar.gz
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas       652 Jul 14 19:35 TIONDmC7ds7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4hCLDm3Qn7jm.diag
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas      8655 Jul 14 19:35 runtime_log.err
[2025-07-14 19:35:25] -rw-r--r--. 1 boincer umatlas     21228 Jul 14 19:35 stderr.txt
[2025-07-14 19:35:25] HITS file was successfully produced:
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas 265932234 Jul 14 19:33 shared/HITS.pool.root.1
[2025-07-14 19:35:25]  *** Contents of shared directory: ***
[2025-07-14 19:35:25] total 575312
[2025-07-14 19:35:25] -rw-r--r--. 2 boincer umatlas 321617265 Jul 14 17:41 ATLAS.root_0
[2025-07-14 19:35:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 17:41 start_atlas.sh
[2025-07-14 19:35:25] -rw-r--r--. 2 boincer umatlas    542886 Jul 14 17:41 input.tar.gz
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas 265932234 Jul 14 19:33 HITS.pool.root.1
[2025-07-14 19:35:25] -rw-------. 1 boincer umatlas   1003520 Jul 14 19:35 result.tar.gz
19:35:27 (1183616): run_atlas exited; CPU time 45453.662957
19:35:27 (1183616): called boinc_finish(0)

</stderr_txt>
]]>

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