Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:09:03 (1650717): wrapper (7.7.26015): starting
17:09:03 (1650717): wrapper: running run_atlas (--nthreads 8)
[2025-07-14 17:09:03] Arguments: --nthreads 8
[2025-07-14 17:09:03] Threads: 8
[2025-07-14 17:09:03] Checking for CVMFS
[2025-07-14 17:09:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 17:09:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 17:09:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 17:09:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 17:09:04] 2.12.6.0 1266553 163 98452 148329 1 258 22315177 32935936 9556 16776704 0 304606 98.834 159943 39327 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-14 17:09:04] CVMFS is ok
[2025-07-14 17:09:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-14 17:09:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-14 17:09:04] Further information can be found at the LHC@home message board.
[2025-07-14 17:09:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 17:09:04] Checking for apptainer binary...
[2025-07-14 17:09:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-14 17:09:04] Running /usr/bin/apptainer --version
[2025-07-14 17:09:04] apptainer version 1.4.1-1.el9
[2025-07-14 17:09:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 17:09:05] c7-13-32.aglt2.org
[2025-07-14 17:09:05] apptainer works
[2025-07-14 17:09:05] Set ATHENA_PROC_NUMBER=8
[2025-07-14 17:09:05] Set ATHENA_CORE_NUMBER=8
[2025-07-14 17:09:05] Starting ATLAS job with PandaID=6720733460
[2025-07-14 17:09:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-14 20:21:10]  *** The last 200 lines of the pilot log: ***
[2025-07-14 20:21:10] 2025-07-15 00:20:37,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,019 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-14 20:21:10] 2025-07-15 00:20:38,023 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3263.0625156250003
[2025-07-14 20:21:10] 2025-07-15 00:20:38,033 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720733460/memory_monitor_summary.json (trf name=prmon)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,033 | INFO     | extracted standard info from prmon json
[2025-07-14 20:21:10] 2025-07-15 00:20:38,033 | INFO     | extracted standard memory fields from prmon json
[2025-07-14 20:21:10] 2025-07-15 00:20:38,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-14 20:21:10] 2025-07-15 00:20:38,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-14 20:21:10] 2025-07-15 00:20:38,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-14 20:21:10] 2025-07-15 00:20:38,036 | INFO     | fitting pss+swap vs Time
[2025-07-14 20:21:10] 2025-07-15 00:20:38,037 | INFO     | sum of square deviations: 1995117488.6236632
[2025-07-14 20:21:10] 2025-07-15 00:20:38,037 | INFO     | sum of deviations: 47090537374.10752
[2025-07-14 20:21:10] 2025-07-15 00:20:38,038 | INFO     | mean x: 1752533171.7526882
[2025-07-14 20:21:10] 2025-07-15 00:20:38,038 | INFO     | mean y: 2130944.7849462368
[2025-07-14 20:21:10] 2025-07-15 00:20:38,038 | INFO     | -- intersect: -41362715634.107574
[2025-07-14 20:21:10] 2025-07-15 00:20:38,038 | INFO     | intersect: -41362715634.107574
[2025-07-14 20:21:10] 2025-07-15 00:20:38,038 | INFO     | chi2: 3.2219908714438033
[2025-07-14 20:21:10] 2025-07-15 00:20:38,038 | INFO     | sum of square deviations: 1838505630.7955813
[2025-07-14 20:21:10] 2025-07-15 00:20:38,039 | INFO     | sum of deviations: 54987171560.68508
[2025-07-14 20:21:10] 2025-07-15 00:20:38,039 | INFO     | mean x: 1752533019.2596686
[2025-07-14 20:21:10] 2025-07-15 00:20:38,039 | INFO     | mean y: 2138414.7513812156
[2025-07-14 20:21:10] 2025-07-15 00:20:38,039 | INFO     | -- intersect: -52413710730.13035
[2025-07-14 20:21:10] 2025-07-15 00:20:38,039 | INFO     | intersect: -52413710730.13035
[2025-07-14 20:21:10] 2025-07-15 00:20:38,040 | INFO     | chi2: 2.5679564423885415
[2025-07-14 20:21:10] 2025-07-15 00:20:38,040 | INFO     | current chi2=2.5679564423885415 (change=20.299077655740938 %)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,040 | INFO     | right removable region: 180
[2025-07-14 20:21:10] 2025-07-15 00:20:38,040 | INFO     | sum of square deviations: 1838476960.7955813
[2025-07-14 20:21:10] 2025-07-15 00:20:38,041 | INFO     | sum of deviations: 9329978033.331491
[2025-07-14 20:21:10] 2025-07-15 00:20:38,041 | INFO     | mean x: 1752533324.2596686
[2025-07-14 20:21:10] 2025-07-15 00:20:38,041 | INFO     | mean y: 2167491.5248618782
[2025-07-14 20:21:10] 2025-07-15 00:20:38,041 | INFO     | -- intersect: -8891660261.937092
[2025-07-14 20:21:10] 2025-07-15 00:20:38,041 | INFO     | intersect: -8891660261.937092
[2025-07-14 20:21:10] 2025-07-15 00:20:38,041 | INFO     | chi2: 0.9180947404936752
[2025-07-14 20:21:10] 2025-07-15 00:20:38,041 | INFO     | current chi2=0.9180947404936752 (change=71.5053587323707 %)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,042 | INFO     | sum of square deviations: 1690277032.4943218
[2025-07-14 20:21:10] 2025-07-15 00:20:38,042 | INFO     | sum of deviations: -317164061.74998665
[2025-07-14 20:21:10] 2025-07-15 00:20:38,042 | INFO     | mean x: 1752533476.7556818
[2025-07-14 20:21:10] 2025-07-15 00:20:38,042 | INFO     | mean y: 2177385.75
[2025-07-14 20:21:10] 2025-07-15 00:20:38,043 | INFO     | -- intersect: 331023264.357491
[2025-07-14 20:21:10] 2025-07-15 00:20:38,043 | INFO     | intersect: 331023264.357491
[2025-07-14 20:21:10] 2025-07-15 00:20:38,043 | INFO     | chi2: 0.7899767500773724
[2025-07-14 20:21:10] 2025-07-15 00:20:38,043 | INFO     | current chi2=0.7899767500773724 (change=13.954767930313114 %)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,043 | INFO     | left removable region: 20
[2025-07-14 20:21:10] 2025-07-15 00:20:38,043 | INFO     | sum of square deviations: 1269888576.4437482
[2025-07-14 20:21:10] 2025-07-15 00:20:38,044 | INFO     | sum of deviations: 5528772723.525003
[2025-07-14 20:21:10] 2025-07-15 00:20:38,044 | INFO     | mean x: 1752533598.76875
[2025-07-14 20:21:10] 2025-07-15 00:20:38,044 | INFO     | mean y: 2190405.825
[2025-07-14 20:21:10] 2025-07-15 00:20:38,044 | INFO     | -- intersect: -7627896310.18302
[2025-07-14 20:21:10] 2025-07-15 00:20:38,044 | INFO     | intersect: -7627896310.18302
[2025-07-14 20:21:10] 2025-07-15 00:20:38,044 | INFO     | chi2: 0.10686553495400611
[2025-07-14 20:21:10] 2025-07-15 00:20:38,044 | INFO     | -- intersect: -7627896310.18302
[2025-07-14 20:21:10] 2025-07-15 00:20:38,044 | INFO     | current memory leak: 4.35 B/s (using 160 data points, chi2=0.11)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | could have reported an average CPU frequency of 3281 MHz (10 samples)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | ..............................
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | . Timing measurements:
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | . get job = 0 s
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | . initial setup = 4 s
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | . payload setup = 45 s
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | . stage-in = 0 s
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | . payload execution = 11325 s
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | . stage-out = 2 s
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | . log creation = 0 s
[2025-07-14 20:21:10] 2025-07-15 00:20:38,045 | INFO     | ..............................
[2025-07-14 20:21:10] 2025-07-15 00:20:38,141 | INFO     | 
[2025-07-14 20:21:10] 2025-07-15 00:20:38,142 | INFO     | job summary report
[2025-07-14 20:21:10] 2025-07-15 00:20:38,142 | INFO     | --------------------------------------------------
[2025-07-14 20:21:10] 2025-07-15 00:20:38,142 | INFO     | PanDA job id: 6720733460
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | task id: 45482148
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | errors: (none)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | pilot state: finished 
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | transexitcode: 0
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | exeerrorcode: 0
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | exeerrordiag: 
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | exitcode: 0
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | exitmsg: OK
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | cpuconsumptiontime: 47792 s
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | nevents: 400
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | neventsw: 0
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | pid: 1674012
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | pgrp: 1674012
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | corecount: 8
[2025-07-14 20:21:10] 2025-07-15 00:20:38,143 | INFO     | event service: False
[2025-07-14 20:21:10] 2025-07-15 00:20:38,144 | INFO     | sizes: {0: 2392738, 1: 2393423, 2: 2393622, 13: 2393622, 24: 2393678, 31: 2393968, 35: 2394124, 11374: 2423383, 11376: 2432381, 11377: 2432437, 11381: 2432631}
[2025-07-14 20:21:10] 2025-07-15 00:20:38,144 | INFO     | --------------------------------------------------
[2025-07-14 20:21:10] 2025-07-15 00:20:38,144 | INFO     | 
[2025-07-14 20:21:10] 2025-07-15 00:20:38,144 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-14 20:21:10] 2025-07-15 00:20:38,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-14 20:21:10] 2025-07-15 00:20:38,169 | INFO     | job 6720733460 has completed (purged errors)
[2025-07-14 20:21:10] 2025-07-15 00:20:38,169 | INFO     | overall cleanup function is called
[2025-07-14 20:21:10] 2025-07-15 00:20:39,178 | INFO     | --- collectZombieJob: --- 10, [1674012]
[2025-07-14 20:21:10] 2025-07-15 00:20:39,178 | INFO     | zombie collector waiting for pid 1674012
[2025-07-14 20:21:10] 2025-07-15 00:20:39,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-14 20:21:10] 2025-07-15 00:20:39,179 | INFO     | collected zombie processes
[2025-07-14 20:21:10] 2025-07-15 00:20:39,179 | INFO     | will attempt to kill all subprocesses of pid=1674012
[2025-07-14 20:21:10] 2025-07-15 00:20:39,460 | INFO     | process IDs to be killed: [1674012] (in reverse order)
[2025-07-14 20:21:10] 2025-07-15 00:20:39,564 | WARNING  | found no corresponding commands to process id(s)
[2025-07-14 20:21:10] 2025-07-15 00:20:39,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-14 20:21:10] 2025-07-15 00:20:39,577 | INFO     | did not find any defunct processes belonging to 1674012
[2025-07-14 20:21:10] 2025-07-15 00:20:39,588 | INFO     | did not find any defunct processes belonging to 1674012
[2025-07-14 20:21:10] 2025-07-15 00:20:39,588 | INFO     | ready for new job
[2025-07-14 20:21:10] 2025-07-15 00:20:39,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-14 20:21:10] 2025-07-15 00:20:39,590 | INFO     | ***************************************
[2025-07-14 20:21:10] 2025-07-15 00:20:39,590 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-14 20:21:10] 2025-07-15 00:20:39,590 | INFO     | ***************************************
[2025-07-14 20:21:10] 2025-07-15 00:20:39,590 | INFO     | 
[2025-07-14 20:21:10] 2025-07-15 00:20:39,606 | INFO     | architecture information:
[2025-07-14 20:21:10] 2025-07-15 00:20:39,606 | INFO     | executing command: cat /etc/os-release
[2025-07-14 20:21:10] 2025-07-15 00:20:39,627 | INFO     | cat /etc/os-release:
[2025-07-14 20:21:10] NAME="CentOS Linux"
[2025-07-14 20:21:10] VERSION="7 (Core)"
[2025-07-14 20:21:10] ID="centos"
[2025-07-14 20:21:10] ID_LIKE="rhel fedora"
[2025-07-14 20:21:10] VERSION_ID="7"
[2025-07-14 20:21:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-14 20:21:10] ANSI_COLOR="0;31"
[2025-07-14 20:21:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-14 20:21:10] HOME_URL="https://www.centos.org/"
[2025-07-14 20:21:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-14 20:21:10] 
[2025-07-14 20:21:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-14 20:21:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-14 20:21:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-14 20:21:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-14 20:21:10] 
[2025-07-14 20:21:10] 2025-07-15 00:20:39,627 | INFO     | ***************************************
[2025-07-14 20:21:10] 2025-07-15 00:20:40,129 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-14 20:21:10] 2025-07-15 00:20:40,146 | INFO     | sufficient remaining disk space (96399785984 B)
[2025-07-14 20:21:10] 2025-07-15 00:20:40,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-14 20:21:10] 2025-07-15 00:20:40,147 | INFO     | current server update state: UPDATING_FINAL
[2025-07-14 20:21:10] 2025-07-15 00:20:40,147 | INFO     | update_server=False
[2025-07-14 20:21:10] 2025-07-15 00:20:40,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-14 20:21:10] 2025-07-15 00:20:40,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-14 20:21:10] 2025-07-15 00:20:40,469 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-14 20:21:10] 2025-07-15 00:20:40,469 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-14 20:21:10] 2025-07-15 00:20:40,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-14 20:21:10] 2025-07-15 00:20:40,470 | INFO     | will abort loop
[2025-07-14 20:21:10] 2025-07-15 00:20:40,632 | INFO     | all payload control threads have been joined
[2025-07-14 20:21:10] 2025-07-15 00:20:41,122 | INFO     | all data control threads have been joined
[2025-07-14 20:21:10] 2025-07-15 00:20:41,152 | INFO     | [job] retrieve thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:41,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-14 20:21:10] 2025-07-15 00:20:41,419 | INFO     | [payload] validate_pre thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:41,475 | INFO     | [job] job monitor thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:41,482 | INFO     | all job control threads have been joined
[2025-07-14 20:21:10] 2025-07-15 00:20:41,516 | INFO     | [payload] validate_post thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:41,629 | INFO     | [data] copytool_in thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:41,633 | INFO     | [payload] control thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:41,997 | INFO     | [payload] failed_post thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:42,128 | INFO     | [data] control thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:42,398 | INFO     | [payload] execute_payloads thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:42,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:42,488 | INFO     | [job] validate thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:42,489 | INFO     | [job] control thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:42,610 | INFO     | [job] create_data_payload thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:43,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-14 20:21:10] 2025-07-15 00:20:43,294 | INFO     | [data] copytool_out thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:44,137 | INFO     | [job] queue monitor thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:44,468 | INFO     | [data] queue_monitor thread has finished
[2025-07-14 20:21:10] 2025-07-15 00:20:45,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624597919552)>', '<ExcThread(monitor, started 139624252946176)>']
[2025-07-14 20:21:10] 2025-07-15 00:20:50,558 | INFO     | all workflow threads have been joined
[2025-07-14 20:21:10] 2025-07-15 00:20:50,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-14 20:21:10] 2025-07-15 00:20:50,559 | INFO     | traces error code: 0
[2025-07-14 20:21:10] 2025-07-15 00:20:50,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-14 20:21:10] 2025-07-15 00:21:10,140 | INFO     | PID=1656661 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 20:21:10] 2025-07-15 00:21:10,140 | INFO     | .. there are 9 such processes running
[2025-07-14 20:21:10] 2025-07-15 00:21:10,141 | INFO     | found 0 job(s) in 20 queues
[2025-07-14 20:21:10] 2025-07-15 00:21:10,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-14 20:21:10] 2025-07-15 00:21:10,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-14 20:21:10] 2025-07-15 00:21:10,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-14 20:21:10] 2025-07-15 00:21:10,141 | CRITICAL | thread 'MainThread' is not alive
[2025-07-14 20:21:10] 2025-07-15 00:21:10,141 | INFO     | [monitor] control thread has ended
[2025-07-14 20:21:10] 2025-07-15 00:21:10,288 [wrapper] ==== pilot stdout END ====
[2025-07-14 20:21:10] 2025-07-15 00:21:10,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-14 20:21:10] 2025-07-15 00:21:10,294 [wrapper] pilotpid: 1656661
[2025-07-14 20:21:10] 2025-07-15 00:21:10,296 [wrapper] Pilot exit status: 0
[2025-07-14 20:21:10] 2025-07-15 00:21:10,308 [wrapper] pandaids: 6720733460
[2025-07-14 20:21:10] 2025-07-15 00:21:10,374 [wrapper] cleanup supervisor_pilot 2061397 1656662
[2025-07-14 20:21:10] 2025-07-15 00:21:10,378 [wrapper] Test setup, not cleaning
[2025-07-14 20:21:10] 2025-07-15 00:21:10,381 [wrapper] apfmon messages muted
[2025-07-14 20:21:10] 2025-07-15 00:21:10,384 [wrapper] ==== wrapper stdout END ====
[2025-07-14 20:21:10] 2025-07-15 00:21:10,386 [wrapper] ==== wrapper stderr END ====
[2025-07-14 20:21:10]  *** Error codes and diagnostics ***
[2025-07-14 20:21:10]     "exeErrorCode": 0,
[2025-07-14 20:21:10]     "exeErrorDiag": "",
[2025-07-14 20:21:10]     "pilotErrorCode": 0,
[2025-07-14 20:21:10]     "pilotErrorDiag": "",
[2025-07-14 20:21:10]  *** Listing of results directory ***
[2025-07-14 20:21:10] total 585448
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas    530466 Jul  6 03:36 pilot3.tar.gz
[2025-07-14 20:21:10] -rwx------. 1 boincer umatlas     36292 Jul  6 03:44 runpilot2-wrapper.sh
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas      5112 Jul  6 03:44 queuedata.json
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas       100 Jul 14 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-14 20:21:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 14 17:09 run_atlas
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas       105 Jul 14 17:09 job.xml
[2025-07-14 20:21:10] -rw-r--r--. 2 boincer umatlas 317661195 Jul 14 17:09 EVNT.45482146._000406.pool.root.1
[2025-07-14 20:21:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 17:09 start_atlas.sh
[2025-07-14 20:21:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 14 17:09 shared
[2025-07-14 20:21:10] -rw-r--r--. 2 boincer umatlas    542909 Jul 14 17:09 input.tar.gz
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas         0 Jul 14 17:09 boinc_lockfile
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas      2617 Jul 14 17:09 pandaJob.out
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas    976445 Jul 14 17:09 agis_schedconf.cvmfs.json
[2025-07-14 20:21:10] drwx------. 4 boincer umatlas      4096 Jul 14 17:10 pilot3
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas      6899 Jul 14 20:18 init_data.xml
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas       531 Jul 14 20:19 boinc_task_state.xml
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas 275220621 Jul 14 20:19 HITS.45482148._010155.pool.root.1
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas      1032 Jul 14 20:20 memory_monitor_summary.json
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas   1588641 Jul 14 20:20 agis_ddmendpoints.agis.ALL.json
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas    376056 Jul 14 20:20 log.45482148._010155.job.log.tgz.1
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas      7779 Jul 14 20:20 heartbeat.json
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas        28 Jul 14 20:21 wrapper_checkpoint.txt
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas        95 Jul 14 20:21 pilot_heartbeat.json
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas       892 Jul 14 20:21 pilotlog.txt
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 14 20:21 boinc_mmap_file
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas    996279 Jul 14 20:21 log.45482148._010155.job.log.1
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas       357 Jul 14 20:21 output.list
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas       620 Jul 14 20:21 runtime_log
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas   1392640 Jul 14 20:21 result.tar.gz
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas      8661 Jul 14 20:21 runtime_log.err
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas       656 Jul 14 20:21 rfCNDmmDZs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpECLDmsd8Cdm.diag
[2025-07-14 20:21:10] -rw-r--r--. 1 boincer umatlas     21214 Jul 14 20:21 stderr.txt
[2025-07-14 20:21:10] HITS file was successfully produced:
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas 275220621 Jul 14 20:19 shared/HITS.pool.root.1
[2025-07-14 20:21:10]  *** Contents of shared directory: ***
[2025-07-14 20:21:10] total 580908
[2025-07-14 20:21:10] -rw-r--r--. 2 boincer umatlas 317661195 Jul 14 17:09 ATLAS.root_0
[2025-07-14 20:21:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 17:09 start_atlas.sh
[2025-07-14 20:21:10] -rw-r--r--. 2 boincer umatlas    542909 Jul 14 17:09 input.tar.gz
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas 275220621 Jul 14 20:19 HITS.pool.root.1
[2025-07-14 20:21:10] -rw-------. 1 boincer umatlas   1392640 Jul 14 20:21 result.tar.gz
20:21:12 (1650717): run_atlas exited; CPU time 47941.828413
20:21:12 (1650717): called boinc_finish(0)

</stderr_txt>
]]>

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