Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:17:12 (3191733): wrapper (7.7.26015): starting
16:17:12 (3191733): wrapper: running run_atlas (--nthreads 8)
[2025-07-14 16:17:12] Arguments: --nthreads 8
[2025-07-14 16:17:12] Threads: 8
[2025-07-14 16:17:12] Checking for CVMFS
[2025-07-14 16:17:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 16:17:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 16:17:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 16:17:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 16:17:13] 2.12.6.0 2754702 114 92044 148329 2 67 24571443 32935937 22364 16776704 0 498722 97.433 3718418 50347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-14 16:17:13] CVMFS is ok
[2025-07-14 16:17:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-14 16:17:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-14 16:17:13] Further information can be found at the LHC@home message board.
[2025-07-14 16:17:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 16:17:13] Checking for apptainer binary...
[2025-07-14 16:17:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-14 16:17:13] Running /usr/bin/apptainer --version
[2025-07-14 16:17:13] apptainer version 1.4.1-1.el9
[2025-07-14 16:17:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 16:17:14] c7-9-14.aglt2.org
[2025-07-14 16:17:14] apptainer works
[2025-07-14 16:17:14] Set ATHENA_PROC_NUMBER=8
[2025-07-14 16:17:14] Set ATHENA_CORE_NUMBER=8
[2025-07-14 16:17:14] Starting ATLAS job with PandaID=6720767634
[2025-07-14 16:17:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-14 17:57:55]  *** The last 200 lines of the pilot log: ***
[2025-07-14 17:57:55]  lfn=log.45482137._006924.job.log.tgz.1
[2025-07-14 17:57:55]  mtime=0
[2025-07-14 17:57:55]  protocol_id=None
[2025-07-14 17:57:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-14 17:57:55]  replicas=None
[2025-07-14 17:57:55]  scope=mc23_13p6TeV
[2025-07-14 17:57:55]  status=None
[2025-07-14 17:57:55]  status_code=0
[2025-07-14 17:57:55]  storage_token=
[2025-07-14 17:57:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6720767634/log.45482137._006924.job.log.tgz.1
[2025-07-14 17:57:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/82/log.45482137._006924.job.log.tgz.1
[2025-07-14 17:57:55]  workdir=None
[2025-07-14 17:57:55] ]
[2025-07-14 17:57:55] 2025-07-14 21:57:17,677 | INFO     | transferring file log.45482137._006924.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6720767634/log.45482137._006924.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-14 17:57:55] 2025-07-14 21:57:17,677 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6720767634/log.45482137._006924.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482137._006924.job
[2025-07-14 17:57:55] 2025-07-14 21:57:17,693 | INFO     | adding to output.list: log.45482137._006924.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/82/log.45482137._006924.job.log.tg
[2025-07-14 17:57:55] 2025-07-14 21:57:17,694 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-14 17:57:55] 2025-07-14 21:57:17,694 | INFO     | summary of transferred files:
[2025-07-14 17:57:55] 2025-07-14 21:57:17,694 | INFO     |  -- lfn=log.45482137._006924.job.log.tgz.1, status_code=0, status=transferred
[2025-07-14 17:57:55] 2025-07-14 21:57:17,694 | INFO     | stage-out finished correctly
[2025-07-14 17:57:55] 2025-07-14 21:57:18,744 | INFO     | PID=3197056 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 17:57:55] 2025-07-14 21:57:18,744 | INFO     | .. there are 17 such processes running
[2025-07-14 17:57:55] 2025-07-14 21:57:19,413 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-14 17:57:55] 2025-07-14 21:57:19,580 | INFO     | monitor loop #429: job 0:6720767634 is in state 'finished'
[2025-07-14 17:57:55] 2025-07-14 21:57:19,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-14 17:57:55] 2025-07-14 21:57:19,635 | INFO     | job 6720767634 has state=finished
[2025-07-14 17:57:55] 2025-07-14 21:57:19,636 | INFO     | preparing for final server update for job 6720767634 in state='finished'
[2025-07-14 17:57:55] 2025-07-14 21:57:19,636 | INFO     | this job has now completed (state=finished)
[2025-07-14 17:57:55] 2025-07-14 21:57:19,636 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-14 17:57:55] 2025-07-14 21:57:19,636 | INFO     | log transfer has been attempted: DONE
[2025-07-14 17:57:55] 2025-07-14 21:57:19,636 | INFO     | job 6720767634 has finished - writing final server update
[2025-07-14 17:57:55] 2025-07-14 21:57:19,636 | INFO     | total number of processed events: 400 (read)
[2025-07-14 17:57:55] 2025-07-14 21:57:19,637 | INFO     | executing command: lscpu
[2025-07-14 17:57:55] 2025-07-14 21:57:19,702 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-14 17:57:55] 2025-07-14 21:57:22,084 | INFO     | monitor loop #430: job 0:6720767634 is in state 'finished'
[2025-07-14 17:57:55] 2025-07-14 21:57:22,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-14 17:57:55] 2025-07-14 21:57:23,166 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-14 17:57:55] 2025-07-14 21:57:23,172 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3695.8762499999993
[2025-07-14 17:57:55] 2025-07-14 21:57:23,185 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720767634/memory_monitor_summary.json (trf name=prmon)
[2025-07-14 17:57:55] 2025-07-14 21:57:23,185 | INFO     | extracted standard info from prmon json
[2025-07-14 17:57:55] 2025-07-14 21:57:23,185 | INFO     | extracted standard memory fields from prmon json
[2025-07-14 17:57:55] 2025-07-14 21:57:23,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-14 17:57:55] 2025-07-14 21:57:23,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-14 17:57:55] 2025-07-14 21:57:23,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-14 17:57:55] 2025-07-14 21:57:23,186 | INFO     | fitting pss+swap vs Time
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | sum of square deviations: 218571540.0
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | sum of deviations: -20054999218.999996
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | mean x: 1752527369.0
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | mean y: 2512744.4269662923
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | -- intersect: 160805401430.53458
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | intersect: 160805401430.53458
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | chi2: 0.1512279259810649
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | -- intersect: 160805401430.53458
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | current memory leak: -91.75 B/s (using 89 data points, chi2=0.15)
[2025-07-14 17:57:55] 2025-07-14 21:57:23,187 | INFO     | could have reported an average CPU frequency of 3736 MHz (7 samples)
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | ..............................
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | . Timing measurements:
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | . get job = 0 s
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | . initial setup = 4 s
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | . payload setup = 35 s
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | . stage-in = 0 s
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | . payload execution = 5872 s
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | . stage-out = 0 s
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | . log creation = 0 s
[2025-07-14 17:57:55] 2025-07-14 21:57:23,188 | INFO     | ..............................
[2025-07-14 17:57:55] 2025-07-14 21:57:23,508 | INFO     | 
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | job summary report
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | --------------------------------------------------
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | PanDA job id: 6720767634
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | task id: 45482137
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | errors: (none)
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | pilot state: finished 
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | transexitcode: 0
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | exeerrorcode: 0
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | exeerrordiag: 
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | exitcode: 0
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | exitmsg: OK
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | cpuconsumptiontime: 33620 s
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | nevents: 400
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | neventsw: 0
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | pid: 3204565
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | pgrp: 3204565
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | corecount: 8
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | event service: False
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | sizes: {0: 2392610, 1: 2393466, 2: 2393466, 12: 2393494, 23: 2393812, 5910: 2420732, 5911: 2429730, 5912: 2429786, 5916: 2429980}
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | --------------------------------------------------
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | 
[2025-07-14 17:57:55] 2025-07-14 21:57:23,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-14 17:57:55] 2025-07-14 21:57:23,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,526 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,526 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,526 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,526 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | job 6720767634 has completed (purged errors)
[2025-07-14 17:57:55] 2025-07-14 21:57:23,527 | INFO     | overall cleanup function is called
[2025-07-14 17:57:55] 2025-07-14 21:57:24,535 | INFO     | --- collectZombieJob: --- 10, [3204565]
[2025-07-14 17:57:55] 2025-07-14 21:57:24,536 | INFO     | zombie collector waiting for pid 3204565
[2025-07-14 17:57:55] 2025-07-14 21:57:24,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-14 17:57:55] 2025-07-14 21:57:24,536 | INFO     | collected zombie processes
[2025-07-14 17:57:55] 2025-07-14 21:57:24,536 | INFO     | will attempt to kill all subprocesses of pid=3204565
[2025-07-14 17:57:55] 2025-07-14 21:57:24,796 | INFO     | process IDs to be killed: [3204565] (in reverse order)
[2025-07-14 17:57:55] 2025-07-14 21:57:24,902 | WARNING  | found no corresponding commands to process id(s)
[2025-07-14 17:57:55] 2025-07-14 21:57:24,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-14 17:57:55] 2025-07-14 21:57:24,914 | INFO     | did not find any defunct processes belonging to 3204565
[2025-07-14 17:57:55] 2025-07-14 21:57:24,923 | INFO     | did not find any defunct processes belonging to 3204565
[2025-07-14 17:57:55] 2025-07-14 21:57:24,923 | INFO     | ready for new job
[2025-07-14 17:57:55] 2025-07-14 21:57:24,923 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-14 17:57:55] 2025-07-14 21:57:24,924 | INFO     | ***************************************
[2025-07-14 17:57:55] 2025-07-14 21:57:24,924 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-14 17:57:55] 2025-07-14 21:57:24,924 | INFO     | ***************************************
[2025-07-14 17:57:55] 2025-07-14 21:57:24,924 | INFO     | 
[2025-07-14 17:57:55] 2025-07-14 21:57:24,941 | INFO     | architecture information:
[2025-07-14 17:57:55] 2025-07-14 21:57:24,941 | INFO     | executing command: cat /etc/os-release
[2025-07-14 17:57:55] 2025-07-14 21:57:24,953 | INFO     | cat /etc/os-release:
[2025-07-14 17:57:55] NAME="CentOS Linux"
[2025-07-14 17:57:55] VERSION="7 (Core)"
[2025-07-14 17:57:55] ID="centos"
[2025-07-14 17:57:55] ID_LIKE="rhel fedora"
[2025-07-14 17:57:55] VERSION_ID="7"
[2025-07-14 17:57:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-14 17:57:55] ANSI_COLOR="0;31"
[2025-07-14 17:57:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-14 17:57:55] HOME_URL="https://www.centos.org/"
[2025-07-14 17:57:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-14 17:57:55] 
[2025-07-14 17:57:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-14 17:57:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-14 17:57:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-14 17:57:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-14 17:57:55] 
[2025-07-14 17:57:55] 2025-07-14 21:57:24,953 | INFO     | ***************************************
[2025-07-14 17:57:55] 2025-07-14 21:57:25,456 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-14 17:57:55] 2025-07-14 21:57:25,470 | INFO     | sufficient remaining disk space (76342624256 B)
[2025-07-14 17:57:55] 2025-07-14 21:57:25,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-14 17:57:55] 2025-07-14 21:57:25,470 | INFO     | current server update state: UPDATING_FINAL
[2025-07-14 17:57:55] 2025-07-14 21:57:25,471 | INFO     | update_server=False
[2025-07-14 17:57:55] 2025-07-14 21:57:25,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-14 17:57:55] 2025-07-14 21:57:25,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-14 17:57:55] 2025-07-14 21:57:25,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-14 17:57:55] 2025-07-14 21:57:25,592 | INFO     | aborting loop
[2025-07-14 17:57:55] 2025-07-14 21:57:25,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-14 17:57:55] 2025-07-14 21:57:26,196 | INFO     | all data control threads have been joined
[2025-07-14 17:57:55] 2025-07-14 21:57:26,476 | INFO     | [job] retrieve thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:26,482 | INFO     | all payload control threads have been joined
[2025-07-14 17:57:55] 2025-07-14 21:57:26,597 | INFO     | [job] job monitor thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:26,750 | INFO     | [job] validate thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:26,928 | INFO     | [job] create_data_payload thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:26,976 | INFO     | all job control threads have been joined
[2025-07-14 17:57:55] 2025-07-14 21:57:27,108 | INFO     | [payload] execute_payloads thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:27,152 | INFO     | [payload] validate_pre thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:27,201 | INFO     | [data] control thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:27,268 | INFO     | [data] copytool_in thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:27,488 | INFO     | [payload] control thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:27,767 | INFO     | [data] copytool_out thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:27,778 | INFO     | [payload] validate_post thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:27,981 | INFO     | [job] control thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:28,006 | INFO     | [payload] failed_post thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:28,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-14 17:57:55] 2025-07-14 21:57:29,261 | INFO     | [job] queue monitor thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:29,477 | INFO     | [data] queue_monitor thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:36,494 | INFO     | job.realtimelogging is not enabled
[2025-07-14 17:57:55] 2025-07-14 21:57:37,498 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-14 17:57:55] 2025-07-14 21:57:39,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083725305664)>', '<ExcThread(monitor, started 140083093034752)>']
[2025-07-14 17:57:55] 2025-07-14 21:57:44,434 | INFO     | all workflow threads have been joined
[2025-07-14 17:57:55] 2025-07-14 21:57:44,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-14 17:57:55] 2025-07-14 21:57:44,435 | INFO     | traces error code: 0
[2025-07-14 17:57:55] 2025-07-14 21:57:44,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-14 17:57:55] 2025-07-14 21:57:55,169 | INFO     | PID=3197056 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 17:57:55] 2025-07-14 21:57:55,171 | INFO     | .. there are 17 such processes running
[2025-07-14 17:57:55] 2025-07-14 21:57:55,171 | INFO     | found 0 job(s) in 20 queues
[2025-07-14 17:57:55] 2025-07-14 21:57:55,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-14 17:57:55] 2025-07-14 21:57:55,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-14 17:57:55] 2025-07-14 21:57:55,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-14 17:57:55] 2025-07-14 21:57:55,171 | INFO     | [monitor] control thread has ended
[2025-07-14 17:57:55] 2025-07-14 21:57:55,262 [wrapper] ==== pilot stdout END ====
[2025-07-14 17:57:55] 2025-07-14 21:57:55,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-14 17:57:55] 2025-07-14 21:57:55,267 [wrapper] pilotpid: 3197056
[2025-07-14 17:57:55] 2025-07-14 21:57:55,268 [wrapper] Pilot exit status: 0
[2025-07-14 17:57:55] 2025-07-14 21:57:55,278 [wrapper] pandaids: 6720767634
[2025-07-14 17:57:55] 2025-07-14 21:57:55,357 [wrapper] cleanup supervisor_pilot 3429931 3197057
[2025-07-14 17:57:55] 2025-07-14 21:57:55,360 [wrapper] Test setup, not cleaning
[2025-07-14 17:57:55] 2025-07-14 21:57:55,362 [wrapper] apfmon messages muted
[2025-07-14 17:57:55] 2025-07-14 21:57:55,364 [wrapper] ==== wrapper stdout END ====
[2025-07-14 17:57:55] 2025-07-14 21:57:55,367 [wrapper] ==== wrapper stderr END ====
[2025-07-14 17:57:55]  *** Error codes and diagnostics ***
[2025-07-14 17:57:55]     "exeErrorCode": 0,
[2025-07-14 17:57:55]     "exeErrorDiag": "",
[2025-07-14 17:57:55]     "pilotErrorCode": 0,
[2025-07-14 17:57:55]     "pilotErrorDiag": "",
[2025-07-14 17:57:55]  *** Listing of results directory ***
[2025-07-14 17:57:55] total 578808
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas    530466 Jul  6 06:39 pilot3.tar.gz
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas      5112 Jul  6 07:34 queuedata.json
[2025-07-14 17:57:55] -rwx------. 1 boincer umatlas     36292 Jul  6 07:34 runpilot2-wrapper.sh
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas       100 Jul 14 16:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-14 17:57:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 14 16:17 run_atlas
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas       105 Jul 14 16:17 job.xml
[2025-07-14 17:57:55] -rw-r--r--. 2 boincer umatlas 315956569 Jul 14 16:17 EVNT.45482135._000277.pool.root.1
[2025-07-14 17:57:55] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 16:17 start_atlas.sh
[2025-07-14 17:57:55] drwxrwx--x. 2 boincer umatlas      4096 Jul 14 16:17 shared
[2025-07-14 17:57:55] -rw-r--r--. 2 boincer umatlas    542879 Jul 14 16:17 input.tar.gz
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas         0 Jul 14 16:17 boinc_lockfile
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas      2541 Jul 14 16:17 pandaJob.out
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas    976445 Jul 14 16:17 agis_schedconf.cvmfs.json
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas   1588641 Jul 14 16:17 agis_ddmendpoints.agis.ALL.json
[2025-07-14 17:57:55] drwx------. 4 boincer umatlas      4096 Jul 14 16:18 pilot3
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas      7160 Jul 14 17:55 init_data.xml
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas 271097139 Jul 14 17:56 HITS.45482137._006924.pool.root.1
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas       530 Jul 14 17:56 boinc_task_state.xml
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas      1033 Jul 14 17:57 memory_monitor_summary.json
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas    330771 Jul 14 17:57 log.45482137._006924.job.log.tgz.1
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas      7772 Jul 14 17:57 heartbeat.json
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas      8192 Jul 14 17:57 boinc_mmap_file
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas        27 Jul 14 17:57 wrapper_checkpoint.txt
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas        95 Jul 14 17:57 pilot_heartbeat.json
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas       823 Jul 14 17:57 pilotlog.txt
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas    560816 Jul 14 17:57 log.45482137._006924.job.log.1
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas       357 Jul 14 17:57 output.list
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas       620 Jul 14 17:57 runtime_log
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas    911360 Jul 14 17:57 result.tar.gz
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas      8655 Jul 14 17:57 runtime_log.err
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas       652 Jul 14 17:57 5XkNDm8ocs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJbCLDmreR1An.diag
[2025-07-14 17:57:55] -rw-r--r--. 1 boincer umatlas     21745 Jul 14 17:57 stderr.txt
[2025-07-14 17:57:55] HITS file was successfully produced:
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas 271097139 Jul 14 17:56 shared/HITS.pool.root.1
[2025-07-14 17:57:55]  *** Contents of shared directory: ***
[2025-07-14 17:57:55] total 574740
[2025-07-14 17:57:55] -rw-r--r--. 2 boincer umatlas 315956569 Jul 14 16:17 ATLAS.root_0
[2025-07-14 17:57:55] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 16:17 start_atlas.sh
[2025-07-14 17:57:55] -rw-r--r--. 2 boincer umatlas    542879 Jul 14 16:17 input.tar.gz
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas 271097139 Jul 14 17:56 HITS.pool.root.1
[2025-07-14 17:57:55] -rw-------. 1 boincer umatlas    911360 Jul 14 17:57 result.tar.gz
17:57:56 (3191733): run_atlas exited; CPU time 33721.664703
17:57:56 (3191733): called boinc_finish(0)

</stderr_txt>
]]>

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