Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:45:49 (1223015): wrapper (7.7.26015): starting
15:45:49 (1223015): wrapper: running run_atlas (--nthreads 12)
[2025-07-14 15:45:49] Arguments: --nthreads 12
[2025-07-14 15:45:49] Threads: 12
[2025-07-14 15:45:49] Checking for CVMFS
[2025-07-14 15:45:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 15:45:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 15:45:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 15:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 15:45:51] 2.12.6.0 1015209 80 83492 148327 3 114 26150506 32935936 8461 16776704 0 194023 98.073 529018 31626 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-14 15:45:51] CVMFS is ok
[2025-07-14 15:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-14 15:45:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-14 15:45:51] Further information can be found at the LHC@home message board.
[2025-07-14 15:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 15:45:51] Checking for apptainer binary...
[2025-07-14 15:45:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-14 15:45:51] Running /usr/bin/apptainer --version
[2025-07-14 15:45:51] apptainer version 1.4.1-1.el9
[2025-07-14 15:45:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 15:45:51] c6-1-26-1.aglt2.org
[2025-07-14 15:45:51] apptainer works
[2025-07-14 15:45:51] Set ATHENA_PROC_NUMBER=12
[2025-07-14 15:45:51] Set ATHENA_CORE_NUMBER=12
[2025-07-14 15:45:51] Starting ATLAS job with PandaID=6720734828
[2025-07-14 15:45:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-14 19:51:44]  *** The last 200 lines of the pilot log: ***
[2025-07-14 19:51:44] 2025-07-14 23:51:09,755 | INFO     | PID=1227039 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 19:51:44] 2025-07-14 23:51:09,756 | INFO     | .. there are 8 such processes running
[2025-07-14 19:51:44] 2025-07-14 23:51:11,239 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-14 19:51:44] 2025-07-14 23:51:11,242 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2822.630714285714
[2025-07-14 19:51:44] 2025-07-14 23:51:11,252 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720734828/memory_monitor_summary.json (trf name=prmon)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,253 | INFO     | extracted standard info from prmon json
[2025-07-14 19:51:44] 2025-07-14 23:51:11,253 | INFO     | extracted standard memory fields from prmon json
[2025-07-14 19:51:44] 2025-07-14 23:51:11,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-14 19:51:44] 2025-07-14 23:51:11,253 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-14 19:51:44] 2025-07-14 23:51:11,253 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-14 19:51:44] 2025-07-14 23:51:11,257 | INFO     | fitting pss+swap vs Time
[2025-07-14 19:51:44] 2025-07-14 23:51:11,257 | INFO     | sum of square deviations: 4179972872.6386695
[2025-07-14 19:51:44] 2025-07-14 23:51:11,259 | INFO     | sum of deviations: 76847642497.46214
[2025-07-14 19:51:44] 2025-07-14 23:51:11,259 | INFO     | mean x: 1752529778.9243698
[2025-07-14 19:51:44] 2025-07-14 23:51:11,259 | INFO     | mean y: 2359099.24789916
[2025-07-14 19:51:44] 2025-07-14 23:51:11,259 | INFO     | -- intersect: -32217415052.520462
[2025-07-14 19:51:44] 2025-07-14 23:51:11,259 | INFO     | intersect: -32217415052.520462
[2025-07-14 19:51:44] 2025-07-14 23:51:11,259 | INFO     | chi2: 2.4238493427847607
[2025-07-14 19:51:44] 2025-07-14 23:51:11,260 | INFO     | sum of square deviations: 3922036049.21888
[2025-07-14 19:51:44] 2025-07-14 23:51:11,261 | INFO     | sum of deviations: 78050288449.35622
[2025-07-14 19:51:44] 2025-07-14 23:51:11,261 | INFO     | mean x: 1752529626.4334764
[2025-07-14 19:51:44] 2025-07-14 23:51:11,261 | INFO     | mean y: 2359802.313304721
[2025-07-14 19:51:44] 2025-07-14 23:51:11,261 | INFO     | -- intersect: -34873771151.76546
[2025-07-14 19:51:44] 2025-07-14 23:51:11,261 | INFO     | intersect: -34873771151.76546
[2025-07-14 19:51:44] 2025-07-14 23:51:11,262 | INFO     | chi2: 2.409923607251964
[2025-07-14 19:51:44] 2025-07-14 23:51:11,262 | INFO     | current chi2=2.409923607251964 (change=0.5745297484866604 %)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,262 | INFO     | right removable region: 232
[2025-07-14 19:51:44] 2025-07-14 23:51:11,262 | INFO     | sum of square deviations: 3921974439.21888
[2025-07-14 19:51:44] 2025-07-14 23:51:11,263 | INFO     | sum of deviations: 27841039351.094425
[2025-07-14 19:51:44] 2025-07-14 23:51:11,264 | INFO     | mean x: 1752529931.4334764
[2025-07-14 19:51:44] 2025-07-14 23:51:11,264 | INFO     | mean y: 2387910.1673819744
[2025-07-14 19:51:44] 2025-07-14 23:51:11,264 | INFO     | -- intersect: -12438349667.594074
[2025-07-14 19:51:44] 2025-07-14 23:51:11,264 | INFO     | intersect: -12438349667.594074
[2025-07-14 19:51:44] 2025-07-14 23:51:11,264 | INFO     | chi2: 0.36522591712134606
[2025-07-14 19:51:44] 2025-07-14 23:51:11,264 | INFO     | current chi2=0.36522591712134606 (change=84.93198769929579 %)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,264 | INFO     | sum of square deviations: 3674841478.0131574
[2025-07-14 19:51:44] 2025-07-14 23:51:11,266 | INFO     | sum of deviations: 20611546320.500008
[2025-07-14 19:51:44] 2025-07-14 23:51:11,266 | INFO     | mean x: 1752530083.9342105
[2025-07-14 19:51:44] 2025-07-14 23:51:11,266 | INFO     | mean y: 2392314.1666666665
[2025-07-14 19:51:44] 2025-07-14 23:51:11,266 | INFO     | -- intersect: -9827243935.234135
[2025-07-14 19:51:44] 2025-07-14 23:51:11,266 | INFO     | intersect: -9827243935.234135
[2025-07-14 19:51:44] 2025-07-14 23:51:11,266 | INFO     | chi2: 0.2970563605341904
[2025-07-14 19:51:44] 2025-07-14 23:51:11,266 | INFO     | current chi2=0.2970563605341904 (change=18.665038101473613 %)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,267 | INFO     | left removable region: 20
[2025-07-14 19:51:44] 2025-07-14 23:51:11,267 | INFO     | sum of square deviations: 2954227245.9386916
[2025-07-14 19:51:44] 2025-07-14 23:51:11,268 | INFO     | sum of deviations: 38186451798.999985
[2025-07-14 19:51:44] 2025-07-14 23:51:11,268 | INFO     | mean x: 1752530205.9292452
[2025-07-14 19:51:44] 2025-07-14 23:51:11,268 | INFO     | mean y: 2383119.0
[2025-07-14 19:51:44] 2025-07-14 23:51:11,268 | INFO     | -- intersect: -22650887825.88434
[2025-07-14 19:51:44] 2025-07-14 23:51:11,268 | INFO     | intersect: -22650887825.88434
[2025-07-14 19:51:44] 2025-07-14 23:51:11,269 | INFO     | chi2: 0.12447529640127739
[2025-07-14 19:51:44] 2025-07-14 23:51:11,269 | INFO     | -- intersect: -22650887825.88434
[2025-07-14 19:51:44] 2025-07-14 23:51:11,269 | INFO     | current memory leak: 12.93 B/s (using 212 data points, chi2=0.12)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,269 | INFO     | could have reported an average CPU frequency of 2938 MHz (11 samples)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,269 | INFO     | ..............................
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | . Timing measurements:
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | . get job = 0 s
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | . initial setup = 3 s
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | . payload setup = 32 s
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | . stage-in = 0 s
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | . payload execution = 14544 s
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | . stage-out = 2 s
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | . log creation = 0 s
[2025-07-14 19:51:44] 2025-07-14 23:51:11,270 | INFO     | ..............................
[2025-07-14 19:51:44] 2025-07-14 23:51:11,353 | INFO     | 
[2025-07-14 19:51:44] 2025-07-14 23:51:11,353 | INFO     | job summary report
[2025-07-14 19:51:44] 2025-07-14 23:51:11,353 | INFO     | --------------------------------------------------
[2025-07-14 19:51:44] 2025-07-14 23:51:11,353 | INFO     | PanDA job id: 6720734828
[2025-07-14 19:51:44] 2025-07-14 23:51:11,353 | INFO     | task id: 45482148
[2025-07-14 19:51:44] 2025-07-14 23:51:11,353 | INFO     | errors: (none)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,353 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | pilot state: finished 
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | transexitcode: 0
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | exeerrorcode: 0
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | exeerrordiag: 
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | exitcode: 0
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | exitmsg: OK
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | cpuconsumptiontime: 56685 s
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | nevents: 400
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | neventsw: 0
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | pid: 1235086
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | pgrp: 1235086
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | corecount: 12
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | event service: False
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | sizes: {0: 2393339, 1: 2393594, 2: 2393594, 12: 2393622, 23: 2393650, 34: 2393678, 35: 2394096, 45: 2394124, 14577: 2424913, 14580: 2433911, 14582: 2433967, 14588:
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | --------------------------------------------------
[2025-07-14 19:51:44] 2025-07-14 23:51:11,354 | INFO     | 
[2025-07-14 19:51:44] 2025-07-14 23:51:11,355 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-14 19:51:44] 2025-07-14 23:51:11,373 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-14 19:51:44] 2025-07-14 23:51:11,375 | INFO     | job 6720734828 has completed (purged errors)
[2025-07-14 19:51:44] 2025-07-14 23:51:11,376 | INFO     | overall cleanup function is called
[2025-07-14 19:51:44] 2025-07-14 23:51:12,385 | INFO     | --- collectZombieJob: --- 10, [1235086]
[2025-07-14 19:51:44] 2025-07-14 23:51:12,385 | INFO     | zombie collector waiting for pid 1235086
[2025-07-14 19:51:44] 2025-07-14 23:51:12,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-14 19:51:44] 2025-07-14 23:51:12,386 | INFO     | collected zombie processes
[2025-07-14 19:51:44] 2025-07-14 23:51:12,386 | INFO     | will attempt to kill all subprocesses of pid=1235086
[2025-07-14 19:51:44] 2025-07-14 23:51:12,616 | INFO     | process IDs to be killed: [1235086] (in reverse order)
[2025-07-14 19:51:44] 2025-07-14 23:51:12,698 | WARNING  | found no corresponding commands to process id(s)
[2025-07-14 19:51:44] 2025-07-14 23:51:12,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-14 19:51:44] 2025-07-14 23:51:12,709 | INFO     | did not find any defunct processes belonging to 1235086
[2025-07-14 19:51:44] 2025-07-14 23:51:12,718 | INFO     | did not find any defunct processes belonging to 1235086
[2025-07-14 19:51:44] 2025-07-14 23:51:12,719 | INFO     | ready for new job
[2025-07-14 19:51:44] 2025-07-14 23:51:12,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-14 19:51:44] 2025-07-14 23:51:12,722 | INFO     | ***************************************
[2025-07-14 19:51:44] 2025-07-14 23:51:12,722 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-14 19:51:44] 2025-07-14 23:51:12,722 | INFO     | ***************************************
[2025-07-14 19:51:44] 2025-07-14 23:51:12,722 | INFO     | 
[2025-07-14 19:51:44] 2025-07-14 23:51:12,737 | INFO     | architecture information:
[2025-07-14 19:51:44] 2025-07-14 23:51:12,737 | INFO     | executing command: cat /etc/os-release
[2025-07-14 19:51:44] 2025-07-14 23:51:12,753 | INFO     | cat /etc/os-release:
[2025-07-14 19:51:44] NAME="CentOS Linux"
[2025-07-14 19:51:44] VERSION="7 (Core)"
[2025-07-14 19:51:44] ID="centos"
[2025-07-14 19:51:44] ID_LIKE="rhel fedora"
[2025-07-14 19:51:44] VERSION_ID="7"
[2025-07-14 19:51:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-14 19:51:44] ANSI_COLOR="0;31"
[2025-07-14 19:51:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-14 19:51:44] HOME_URL="https://www.centos.org/"
[2025-07-14 19:51:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-14 19:51:44] 
[2025-07-14 19:51:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-14 19:51:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-14 19:51:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-14 19:51:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-14 19:51:44] 
[2025-07-14 19:51:44] 2025-07-14 23:51:12,753 | INFO     | ***************************************
[2025-07-14 19:51:44] 2025-07-14 23:51:13,256 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-14 19:51:44] 2025-07-14 23:51:13,272 | INFO     | sufficient remaining disk space (76268175360 B)
[2025-07-14 19:51:44] 2025-07-14 23:51:13,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-14 19:51:44] 2025-07-14 23:51:13,272 | INFO     | current server update state: UPDATING_FINAL
[2025-07-14 19:51:44] 2025-07-14 23:51:13,273 | INFO     | update_server=False
[2025-07-14 19:51:44] 2025-07-14 23:51:13,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-14 19:51:44] 2025-07-14 23:51:13,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-14 19:51:44] 2025-07-14 23:51:13,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-14 19:51:44] 2025-07-14 23:51:13,273 | INFO     | aborting loop
[2025-07-14 19:51:44] 2025-07-14 23:51:13,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-14 19:51:44] 2025-07-14 23:51:14,071 | INFO     | all data control threads have been joined
[2025-07-14 19:51:44] 2025-07-14 23:51:14,278 | INFO     | [job] retrieve thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:14,278 | INFO     | [payload] execute_payloads thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:14,279 | INFO     | [job] job monitor thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:14,279 | INFO     | [job] queue monitor thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:14,338 | INFO     | all payload control threads have been joined
[2025-07-14 19:51:44] 2025-07-14 23:51:14,389 | INFO     | all job control threads have been joined
[2025-07-14 19:51:44] 2025-07-14 23:51:14,494 | INFO     | [data] copytool_in thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:14,716 | INFO     | [payload] validate_pre thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:15,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-14 19:51:44] 2025-07-14 23:51:15,077 | INFO     | [data] control thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:15,215 | INFO     | [job] create_data_payload thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:15,281 | INFO     | [data] copytool_out thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:15,294 | INFO     | [payload] validate_post thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:15,296 | INFO     | [payload] failed_post thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:15,344 | INFO     | [payload] control thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:15,380 | INFO     | [job] validate thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:15,394 | INFO     | [job] control thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:19,018 | INFO     | [data] queue_monitor thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:24,089 | INFO     | job.realtimelogging is not enabled
[2025-07-14 19:51:44] 2025-07-14 23:51:25,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-14 19:51:44] 2025-07-14 23:51:26,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870009726784)>', '<ExcThread(monitor, started 139869653276416)>']
[2025-07-14 19:51:44] 2025-07-14 23:51:32,018 | INFO     | all workflow threads have been joined
[2025-07-14 19:51:44] 2025-07-14 23:51:32,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-14 19:51:44] 2025-07-14 23:51:32,018 | INFO     | traces error code: 0
[2025-07-14 19:51:44] 2025-07-14 23:51:32,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-14 19:51:44] 2025-07-14 23:51:44,201 | INFO     | PID=1227039 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 19:51:44] 2025-07-14 23:51:44,202 | INFO     | .. there are 8 such processes running
[2025-07-14 19:51:44] 2025-07-14 23:51:44,203 | INFO     | found 0 job(s) in 20 queues
[2025-07-14 19:51:44] 2025-07-14 23:51:44,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-14 19:51:44] 2025-07-14 23:51:44,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-14 19:51:44] 2025-07-14 23:51:44,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-14 19:51:44] 2025-07-14 23:51:44,204 | CRITICAL | thread 'MainThread' is not alive
[2025-07-14 19:51:44] 2025-07-14 23:51:44,204 | INFO     | [monitor] control thread has ended
[2025-07-14 19:51:44] 2025-07-14 23:51:44,364 [wrapper] ==== pilot stdout END ====
[2025-07-14 19:51:44] 2025-07-14 23:51:44,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-14 19:51:44] 2025-07-14 23:51:44,370 [wrapper] pilotpid: 1227039
[2025-07-14 19:51:44] 2025-07-14 23:51:44,373 [wrapper] Pilot exit status: 0
[2025-07-14 19:51:44] 2025-07-14 23:51:44,384 [wrapper] pandaids: 6720734828
[2025-07-14 19:51:44] 2025-07-14 23:51:44,443 [wrapper] cleanup supervisor_pilot 1650084 1227040
[2025-07-14 19:51:44] 2025-07-14 23:51:44,446 [wrapper] Test setup, not cleaning
[2025-07-14 19:51:44] 2025-07-14 23:51:44,449 [wrapper] apfmon messages muted
[2025-07-14 19:51:44] 2025-07-14 23:51:44,453 [wrapper] ==== wrapper stdout END ====
[2025-07-14 19:51:44] 2025-07-14 23:51:44,456 [wrapper] ==== wrapper stderr END ====
[2025-07-14 19:51:44]  *** Error codes and diagnostics ***
[2025-07-14 19:51:44]     "exeErrorCode": 0,
[2025-07-14 19:51:44]     "exeErrorDiag": "",
[2025-07-14 19:51:44]     "pilotErrorCode": 0,
[2025-07-14 19:51:44]     "pilotErrorDiag": "",
[2025-07-14 19:51:44]  *** Listing of results directory ***
[2025-07-14 19:51:44] total 577728
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas    530466 Jul  6 05:05 pilot3.tar.gz
[2025-07-14 19:51:44] -rwx------. 1 boincer umatlas     36292 Jul  6 05:17 runpilot2-wrapper.sh
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas      5112 Jul  6 05:17 queuedata.json
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas       100 Jul 14 15:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-14 19:51:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 14 15:45 run_atlas
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas       105 Jul 14 15:45 job.xml
[2025-07-14 19:51:44] -rw-r--r--. 2 boincer umatlas 325492801 Jul 14 15:45 EVNT.45482146._000436.pool.root.1
[2025-07-14 19:51:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 15:45 start_atlas.sh
[2025-07-14 19:51:44] drwxrwx--x. 2 boincer umatlas      4096 Jul 14 15:45 shared
[2025-07-14 19:51:44] -rw-r--r--. 2 boincer umatlas    542903 Jul 14 15:45 input.tar.gz
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas         0 Jul 14 15:45 boinc_lockfile
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas      2617 Jul 14 15:45 pandaJob.out
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas    976461 Jul 14 15:46 agis_schedconf.cvmfs.json
[2025-07-14 19:51:44] drwx------. 4 boincer umatlas      4096 Jul 14 15:46 pilot3
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas      6841 Jul 14 19:49 init_data.xml
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas 258852670 Jul 14 19:50 HITS.45482148._010896.pool.root.1
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas       531 Jul 14 19:50 boinc_task_state.xml
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas      1041 Jul 14 19:50 memory_monitor_summary.json
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas   1588641 Jul 14 19:51 agis_ddmendpoints.agis.ALL.json
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas    452638 Jul 14 19:51 log.45482148._010896.job.log.tgz.1
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas      7829 Jul 14 19:51 heartbeat.json
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas      8192 Jul 14 19:51 boinc_mmap_file
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas        28 Jul 14 19:51 wrapper_checkpoint.txt
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas        95 Jul 14 19:51 pilot_heartbeat.json
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas       892 Jul 14 19:51 pilotlog.txt
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas   1235902 Jul 14 19:51 log.45482148._010896.job.log.1
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas       357 Jul 14 19:51 output.list
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas       620 Jul 14 19:51 runtime_log
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas   1710080 Jul 14 19:51 result.tar.gz
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas      8668 Jul 14 19:51 runtime_log.err
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas       657 Jul 14 19:51 76FKDmTgas7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJgqKDmNQxAbn.diag
[2025-07-14 19:51:44] -rw-r--r--. 1 boincer umatlas     21281 Jul 14 19:51 stderr.txt
[2025-07-14 19:51:44] HITS file was successfully produced:
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas 258852670 Jul 14 19:50 shared/HITS.pool.root.1
[2025-07-14 19:51:44]  *** Contents of shared directory: ***
[2025-07-14 19:51:44] total 572880
[2025-07-14 19:51:44] -rw-r--r--. 2 boincer umatlas 325492801 Jul 14 15:45 ATLAS.root_0
[2025-07-14 19:51:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 15:45 start_atlas.sh
[2025-07-14 19:51:44] -rw-r--r--. 2 boincer umatlas    542903 Jul 14 15:45 input.tar.gz
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas 258852670 Jul 14 19:50 HITS.pool.root.1
[2025-07-14 19:51:44] -rw-------. 1 boincer umatlas   1710080 Jul 14 19:51 result.tar.gz
19:51:45 (1223015): run_atlas exited; CPU time 56964.253668
19:51:45 (1223015): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN