Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:30:46 (32088): wrapper (7.7.26015): starting
19:30:46 (32088): wrapper: running run_atlas (--nthreads 8)
[2025-07-14 19:30:46] Arguments: --nthreads 8
[2025-07-14 19:30:46] Threads: 8
[2025-07-14 19:30:46] Checking for CVMFS
[2025-07-14 19:30:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 19:30:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 19:30:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 19:30:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 19:30:47] 2.11.2.0 4058 91245 137180 148324 2 153 22191276 25165824 1946 130560 0 77647659 99.884 44524823 3632 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-14 19:30:47] CVMFS is ok
[2025-07-14 19:30:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 19:30:47] Checking for apptainer binary...
[2025-07-14 19:30:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-14 19:30:47] Running /usr/bin/apptainer --version
[2025-07-14 19:30:47] apptainer version 1.3.2-1.el7
[2025-07-14 19:30:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 19:30:48] cg-vwn233.simple-grid.lan
[2025-07-14 19:30:48] apptainer works
[2025-07-14 19:30:48] Set ATHENA_PROC_NUMBER=8
[2025-07-14 19:30:48] Set ATHENA_CORE_NUMBER=8
[2025-07-14 19:30:48] Starting ATLAS job with PandaID=6720715277
[2025-07-14 19:30:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-15 00:29:03]  *** The last 200 lines of the pilot log: ***
[2025-07-15 00:29:03] 2025-07-14 22:28:41,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-15 00:29:03] 2025-07-14 22:28:41,310 | INFO     | fitting pss+swap vs Time
[2025-07-15 00:29:03] 2025-07-14 22:28:41,311 | INFO     | sum of square deviations: 7720081493.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,313 | INFO     | sum of deviations: -8715437342.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,314 | INFO     | mean x: 1752523215.5
[2025-07-15 00:29:03] 2025-07-14 22:28:41,314 | INFO     | mean y: 2549314.787671233
[2025-07-15 00:29:03] 2025-07-14 22:28:41,314 | INFO     | -- intersect: 1981026651.9686267
[2025-07-15 00:29:03] 2025-07-14 22:28:41,314 | INFO     | intersect: 1981026651.9686267
[2025-07-15 00:29:03] 2025-07-14 22:28:41,314 | INFO     | chi2: 2.4421940698123983
[2025-07-15 00:29:03] 2025-07-14 22:28:41,315 | INFO     | sum of square deviations: 7330250928.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,318 | INFO     | sum of deviations: 11097132139.000015
[2025-07-15 00:29:03] 2025-07-14 22:28:41,318 | INFO     | mean x: 1752523063.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,318 | INFO     | mean y: 2556958.2961672475
[2025-07-15 00:29:03] 2025-07-14 22:28:41,318 | INFO     | -- intersect: -2650555492.8027306
[2025-07-15 00:29:03] 2025-07-14 22:28:41,318 | INFO     | intersect: -2650555492.8027306
[2025-07-15 00:29:03] 2025-07-14 22:28:41,319 | INFO     | chi2: 1.6757433882948605
[2025-07-15 00:29:03] 2025-07-14 22:28:41,319 | INFO     | current chi2=1.6757433882948605 (change=31.383692679935717 %)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,319 | INFO     | sum of square deviations: 6953769450.5
[2025-07-15 00:29:03] 2025-07-14 22:28:41,322 | INFO     | sum of deviations: 10866544452.999994
[2025-07-15 00:29:03] 2025-07-14 22:28:41,322 | INFO     | mean x: 1752522910.5
[2025-07-15 00:29:03] 2025-07-14 22:28:41,322 | INFO     | mean y: 2556864.9007092197
[2025-07-15 00:29:03] 2025-07-14 22:28:41,322 | INFO     | -- intersect: -2736082695.6156178
[2025-07-15 00:29:03] 2025-07-14 22:28:41,322 | INFO     | intersect: -2736082695.6156178
[2025-07-15 00:29:03] 2025-07-14 22:28:41,323 | INFO     | chi2: 1.676049111284277
[2025-07-15 00:29:03] 2025-07-14 22:28:41,323 | INFO     | current chi2=1.676049111284277 (change=-0.018244021820527246 %)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,323 | INFO     | right removable region: 281
[2025-07-15 00:29:03] 2025-07-14 22:28:41,323 | INFO     | sum of square deviations: 7330250928.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,326 | INFO     | sum of deviations: -55799826554.999985
[2025-07-15 00:29:03] 2025-07-14 22:28:41,326 | INFO     | mean x: 1752523368.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,326 | INFO     | mean y: 2567599.662020906
[2025-07-15 00:29:03] 2025-07-14 22:28:41,327 | INFO     | -- intersect: 13343243236.623573
[2025-07-15 00:29:03] 2025-07-14 22:28:41,327 | INFO     | intersect: 13343243236.623573
[2025-07-15 00:29:03] 2025-07-14 22:28:41,327 | INFO     | chi2: 0.9682199818403727
[2025-07-15 00:29:03] 2025-07-14 22:28:41,327 | INFO     | current chi2=0.9682199818403727 (change=60.35450278876697 %)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,328 | INFO     | sum of square deviations: 6953769450.5
[2025-07-15 00:29:03] 2025-07-14 22:28:41,331 | INFO     | sum of deviations: -54108640473.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,331 | INFO     | mean x: 1752523520.5
[2025-07-15 00:29:03] 2025-07-14 22:28:41,331 | INFO     | mean y: 2566890.744680851
[2025-07-15 00:29:03] 2025-07-14 22:28:41,331 | INFO     | -- intersect: 13639295253.142773
[2025-07-15 00:29:03] 2025-07-14 22:28:41,331 | INFO     | intersect: 13639295253.142773
[2025-07-15 00:29:03] 2025-07-14 22:28:41,332 | INFO     | chi2: 0.9511486102868227
[2025-07-15 00:29:03] 2025-07-14 22:28:41,332 | INFO     | current chi2=0.9511486102868227 (change=1.76317075393353 %)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,332 | INFO     | left removable region: 20
[2025-07-15 00:29:03] 2025-07-14 22:28:41,332 | INFO     | sum of square deviations: 5513070810.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,334 | INFO     | sum of deviations: -16003616935.999998
[2025-07-15 00:29:03] 2025-07-14 22:28:41,334 | INFO     | mean x: 1752523490.0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,335 | INFO     | mean y: 2567272.3908045976
[2025-07-15 00:29:03] 2025-07-14 22:28:41,335 | INFO     | -- intersect: 5089879874.004537
[2025-07-15 00:29:03] 2025-07-14 22:28:41,335 | INFO     | intersect: 5089879874.004537
[2025-07-15 00:29:03] 2025-07-14 22:28:41,335 | INFO     | chi2: 0.11986966647290287
[2025-07-15 00:29:03] 2025-07-14 22:28:41,336 | INFO     | -- intersect: 5089879874.004537
[2025-07-15 00:29:03] 2025-07-14 22:28:41,336 | INFO     | current memory leak: -2.90 B/s (using 261 data points, chi2=0.12)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,336 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | ..............................
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | . Timing measurements:
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | . get job = 0 s
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | . initial setup = 2 s
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | . payload setup = 17 s
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | . stage-in = 0 s
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | . payload execution = 17787 s
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | . stage-out = 1 s
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | . log creation = 0 s
[2025-07-15 00:29:03] 2025-07-14 22:28:41,337 | INFO     | ..............................
[2025-07-15 00:29:03] 2025-07-14 22:28:41,447 | INFO     | 
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | job summary report
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | --------------------------------------------------
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | PanDA job id: 6720715277
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | task id: 45482137
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | errors: (none)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | pilot state: finished 
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | transexitcode: 0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,448 | INFO     | exeerrorcode: 0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | exeerrordiag: 
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | exitcode: 0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | exitmsg: OK
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | cpuconsumptiontime: 68301 s
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | nevents: 400
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | neventsw: 0
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | pid: 17573
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | pgrp: 17573
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | corecount: 8
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | event service: False
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | sizes: {0: 2393311, 1: 2393510, 10: 2393772, 12: 2393800, 17809: 2425611, 17812: 2434609, 17815: 2434793, 17822: 2434987}
[2025-07-15 00:29:03] 2025-07-14 22:28:41,449 | INFO     | --------------------------------------------------
[2025-07-15 00:29:03] 2025-07-14 22:28:41,450 | INFO     | 
[2025-07-15 00:29:03] 2025-07-14 22:28:41,450 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-15 00:29:03] 2025-07-14 22:28:41,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-15 00:29:03] 2025-07-14 22:28:41,482 | INFO     | job 6720715277 has completed (purged errors)
[2025-07-15 00:29:03] 2025-07-14 22:28:41,483 | INFO     | overall cleanup function is called
[2025-07-15 00:29:03] 2025-07-14 22:28:42,490 | INFO     | --- collectZombieJob: --- 10, [17573]
[2025-07-15 00:29:03] 2025-07-14 22:28:42,491 | INFO     | zombie collector waiting for pid 17573
[2025-07-15 00:29:03] 2025-07-14 22:28:42,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-15 00:29:03] 2025-07-14 22:28:42,491 | INFO     | collected zombie processes
[2025-07-15 00:29:03] 2025-07-14 22:28:42,491 | INFO     | will attempt to kill all subprocesses of pid=17573
[2025-07-15 00:29:03] 2025-07-14 22:28:42,574 | INFO     | process IDs to be killed: [17573] (in reverse order)
[2025-07-15 00:29:03] 2025-07-14 22:28:42,631 | WARNING  | found no corresponding commands to process id(s)
[2025-07-15 00:29:03] 2025-07-14 22:28:42,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-15 00:29:03] 2025-07-14 22:28:42,634 | INFO     | did not find any defunct processes belonging to 17573
[2025-07-15 00:29:03] 2025-07-14 22:28:42,636 | INFO     | did not find any defunct processes belonging to 17573
[2025-07-15 00:29:03] 2025-07-14 22:28:42,637 | INFO     | ready for new job
[2025-07-15 00:29:03] 2025-07-14 22:28:42,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-15 00:29:03] 2025-07-14 22:28:42,639 | INFO     | ***************************************
[2025-07-15 00:29:03] 2025-07-14 22:28:42,639 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-15 00:29:03] 2025-07-14 22:28:42,639 | INFO     | ***************************************
[2025-07-15 00:29:03] 2025-07-14 22:28:42,639 | INFO     | 
[2025-07-15 00:29:03] 2025-07-14 22:28:42,640 | INFO     | pilot is running in a VM
[2025-07-15 00:29:03] 2025-07-14 22:28:42,640 | INFO     | architecture information:
[2025-07-15 00:29:03] 2025-07-14 22:28:42,640 | INFO     | executing command: cat /etc/os-release
[2025-07-15 00:29:03] 2025-07-14 22:28:42,661 | INFO     | cat /etc/os-release:
[2025-07-15 00:29:03] NAME="CentOS Linux"
[2025-07-15 00:29:03] VERSION="7 (Core)"
[2025-07-15 00:29:03] ID="centos"
[2025-07-15 00:29:03] ID_LIKE="rhel fedora"
[2025-07-15 00:29:03] VERSION_ID="7"
[2025-07-15 00:29:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-15 00:29:03] ANSI_COLOR="0;31"
[2025-07-15 00:29:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-15 00:29:03] HOME_URL="https://www.centos.org/"
[2025-07-15 00:29:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-15 00:29:03] 
[2025-07-15 00:29:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-15 00:29:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-15 00:29:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-15 00:29:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-15 00:29:03] 
[2025-07-15 00:29:03] 2025-07-14 22:28:42,661 | INFO     | ***************************************
[2025-07-15 00:29:03] 2025-07-14 22:28:43,166 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-15 00:29:03] 2025-07-14 22:28:43,225 | INFO     | sufficient remaining disk space (497905827840 B)
[2025-07-15 00:29:03] 2025-07-14 22:28:43,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-15 00:29:03] 2025-07-14 22:28:43,225 | INFO     | current server update state: UPDATING_FINAL
[2025-07-15 00:29:03] 2025-07-14 22:28:43,225 | INFO     | update_server=False
[2025-07-15 00:29:03] 2025-07-14 22:28:43,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-15 00:29:03] 2025-07-14 22:28:43,226 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-15 00:29:03] 2025-07-14 22:28:43,227 | INFO     | found 0 job(s) in 20 queues
[2025-07-15 00:29:03] 2025-07-14 22:28:43,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-15 00:29:03] 2025-07-14 22:28:43,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-15 00:29:03] 2025-07-14 22:28:43,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-15 00:29:03] 2025-07-14 22:28:43,427 | INFO     | all data control threads have been joined
[2025-07-15 00:29:03] 2025-07-14 22:28:43,499 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-15 00:29:03] 2025-07-14 22:28:43,500 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-15 00:29:03] 2025-07-14 22:28:43,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-15 00:29:03] 2025-07-14 22:28:43,500 | INFO     | will abort loop
[2025-07-15 00:29:03] 2025-07-14 22:28:43,514 | INFO     | all payload control threads have been joined
[2025-07-15 00:29:03] 2025-07-14 22:28:43,683 | INFO     | all job control threads have been joined
[2025-07-15 00:29:03] 2025-07-14 22:28:44,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-15 00:29:03] 2025-07-14 22:28:44,231 | INFO     | [job] retrieve thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,234 | INFO     | [job] queue monitor thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,246 | INFO     | [payload] validate_post thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,431 | INFO     | [job] create_data_payload thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,434 | INFO     | [data] control thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,506 | INFO     | [job] job monitor thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,513 | INFO     | [data] copytool_in thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,521 | INFO     | [payload] control thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-15 00:29:03] 2025-07-14 22:28:44,688 | INFO     | [job] control thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,695 | INFO     | [payload] execute_payloads thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,845 | INFO     | [payload] validate_pre thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:44,901 | INFO     | [payload] failed_post thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:45,466 | INFO     | [job] validate thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:46,095 | INFO     | [data] copytool_out thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:48,628 | INFO     | [data] queue_monitor thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:53,873 | INFO     | job.realtimelogging is not enabled
[2025-07-15 00:29:03] 2025-07-14 22:28:54,879 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-15 00:29:03] 2025-07-14 22:28:56,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435455743808)>', '<ExcThread(monitor, started 140434869307136)>']
[2025-07-15 00:29:03] 2025-07-14 22:28:57,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-15 00:29:03] 2025-07-14 22:28:57,306 | INFO     | [monitor] control thread has ended
[2025-07-15 00:29:03] 2025-07-14 22:29:01,380 | INFO     | all workflow threads have been joined
[2025-07-15 00:29:03] 2025-07-14 22:29:01,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-15 00:29:03] 2025-07-14 22:29:01,381 | INFO     | traces error code: 0
[2025-07-15 00:29:03] 2025-07-14 22:29:01,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-15 00:29:03] 2025-07-14 22:29:01,587 [wrapper] ==== pilot stdout END ====
[2025-07-15 00:29:03] 2025-07-14 22:29:01,653 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-15 00:29:03] 2025-07-14 22:29:01,728 [wrapper] pilotpid: 3911
[2025-07-15 00:29:03] 2025-07-14 22:29:01,817 [wrapper] Pilot exit status: 0
[2025-07-15 00:29:03] 2025-07-14 22:29:02,141 [wrapper] pandaids: 6720715277
[2025-07-15 00:29:03] 2025-07-14 22:29:02,801 [wrapper] cleanup supervisor_pilot  3837 3912
[2025-07-15 00:29:03] 2025-07-14 22:29:02,881 [wrapper] Test setup, not cleaning
[2025-07-15 00:29:03] 2025-07-14 22:29:03,011 [wrapper] apfmon messages muted
[2025-07-15 00:29:03] 2025-07-14 22:29:03,106 [wrapper] ==== wrapper stdout END ====
[2025-07-15 00:29:03] 2025-07-14 22:29:03,172 [wrapper] ==== wrapper stderr END ====
[2025-07-15 00:29:03]  *** Error codes and diagnostics ***
[2025-07-15 00:29:03]     "exeErrorCode": 0,
[2025-07-15 00:29:03]     "exeErrorDiag": "",
[2025-07-15 00:29:03]     "pilotErrorCode": 0,
[2025-07-15 00:29:03]     "pilotErrorDiag": "",
[2025-07-15 00:29:03]  *** Listing of results directory ***
[2025-07-15 00:29:03] total 570248
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc    530466 Jul  6 06:59 pilot3.tar.gz
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc      5112 Jul  6 07:15 queuedata.json
[2025-07-15 00:29:03] -rwx------. 1 boinc boinc     36292 Jul  6 07:17 runpilot2-wrapper.sh
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc       100 Jul 14 19:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-15 00:29:03] -rwxr-xr-x. 1 boinc boinc      7986 Jul 14 19:30 run_atlas
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc       105 Jul 14 19:30 job.xml
[2025-07-15 00:29:03] -rw-r--r--. 2 boinc boinc    542878 Jul 14 19:30 input.tar.gz
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc      6392 Jul 14 19:30 init_data.xml
[2025-07-15 00:29:03] -rw-r--r--. 2 boinc boinc 313207024 Jul 14 19:30 EVNT.45482135._000247.pool.root.1
[2025-07-15 00:29:03] -rw-r--r--. 2 boinc boinc     15095 Jul 14 19:30 start_atlas.sh
[2025-07-15 00:29:03] drwxrwx--x. 2 boinc boinc        68 Jul 14 19:30 shared
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc         0 Jul 14 19:30 boinc_lockfile
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc      2538 Jul 14 19:30 pandaJob.out
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc    976453 Jul 14 19:31 agis_schedconf.cvmfs.json
[2025-07-15 00:29:03] drwx------. 4 boinc boinc      4096 Jul 14 19:31 pilot3
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc 262994128 Jul 15 00:27 HITS.45482137._006153.pool.root.1
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc       531 Jul 15 00:27 boinc_task_state.xml
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc        95 Jul 15 00:28 pilot_heartbeat.json
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc      1017 Jul 15 00:28 memory_monitor_summary.json
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc   1588641 Jul 15 00:28 agis_ddmendpoints.agis.ALL.json
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc    403493 Jul 15 00:28 log.45482137._006153.job.log.tgz.1
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc      7768 Jul 15 00:28 heartbeat.json
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc        28 Jul 15 00:28 wrapper_checkpoint.txt
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc      8192 Jul 15 00:28 boinc_mmap_file
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc      4801 Jul 15 00:29 pilotlog.txt
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc   1532912 Jul 15 00:29 log.45482137._006153.job.log.1
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc       357 Jul 15 00:29 output.list
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc       620 Jul 15 00:29 runtime_log
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc   1955840 Jul 15 00:29 result.tar.gz
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc      8660 Jul 15 00:29 runtime_log.err
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc       657 Jul 15 00:29 bXuNDmuvWs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms2BLDmbFFQKo.diag
[2025-07-15 00:29:03] -rw-r--r--. 1 boinc boinc     20528 Jul 15 00:29 stderr.txt
[2025-07-15 00:29:03] HITS file was successfully produced:
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc 262994128 Jul 15 00:27 shared/HITS.pool.root.1
[2025-07-15 00:29:03]  *** Contents of shared directory: ***
[2025-07-15 00:29:03] total 565160
[2025-07-15 00:29:03] -rw-r--r--. 2 boinc boinc    542878 Jul 14 19:30 input.tar.gz
[2025-07-15 00:29:03] -rw-r--r--. 2 boinc boinc 313207024 Jul 14 19:30 ATLAS.root_0
[2025-07-15 00:29:03] -rw-r--r--. 2 boinc boinc     15095 Jul 14 19:30 start_atlas.sh
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc 262994128 Jul 15 00:27 HITS.pool.root.1
[2025-07-15 00:29:03] -rw-------. 1 boinc boinc   1955840 Jul 15 00:29 result.tar.gz
00:29:04 (32088): run_atlas exited; CPU time 68491.754987
00:29:04 (32088): called boinc_finish(0)

</stderr_txt>
]]>

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