Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:34:36 (1078776): wrapper (7.7.26015): starting
14:34:36 (1078776): wrapper: running run_atlas (--nthreads 4)
[2025-07-14 14:34:36] Arguments: --nthreads 4
[2025-07-14 14:34:36] Threads: 4
[2025-07-14 14:34:36] Checking for CVMFS
[2025-07-14 14:34:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 14:34:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 14:34:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 14:34:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 14:34:57] 2.13.1.0 1078914 0 25000 148316 3 1 2727408 4194305 0 130560 0 0 0.000 1291 138 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-14 14:34:57] CVMFS is ok
[2025-07-14 14:34:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-14 14:34:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-14 14:34:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-14 14:34:57] Further information can be found at the LHC@home message board.
[2025-07-14 14:34:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 14:34:57] Checking for apptainer binary...
[2025-07-14 14:34:57] apptainer is not installed, using version from CVMFS
[2025-07-14 14:34:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 14:34:57] Ryze
[2025-07-14 14:34:57] apptainer works
[2025-07-14 14:34:57] Set ATHENA_PROC_NUMBER=4
[2025-07-14 14:34:57] Set ATHENA_CORE_NUMBER=4
[2025-07-14 14:34:57] Starting ATLAS job with PandaID=6720715029
[2025-07-14 14:34:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-14 16:25:25]  *** The last 200 lines of the pilot log: ***
[2025-07-14 16:25:25] 2025-07-14 14:24:53,213 | INFO     | extracted standard memory fields from prmon json
[2025-07-14 16:25:25] 2025-07-14 14:24:53,213 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-14 16:25:25] 2025-07-14 14:24:53,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-14 16:25:25] 2025-07-14 14:24:53,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-14 16:25:25] 2025-07-14 14:24:53,214 | INFO     | fitting pss+swap vs Time
[2025-07-14 16:25:25] 2025-07-14 14:24:53,214 | INFO     | sum of square deviations: 390582207.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | sum of deviations: -25002435451.000008
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | mean x: 1752499806.5
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | mean y: 2493620.685185185
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | -- intersect: 112185697321.78531
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | intersect: 112185697321.78531
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | chi2: 2.0391567348676283
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | sum of square deviations: 338804492.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | sum of deviations: -16878284589.999996
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | mean x: 1752499654.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | mean y: 2516859.5825242717
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | -- intersect: 87307108748.19456
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | intersect: 87307108748.19456
[2025-07-14 16:25:25] 2025-07-14 14:24:53,215 | INFO     | chi2: 1.3931188552396114
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | current chi2=1.3931188552396114 (change=31.68161959212784 %)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | sum of square deviations: 291817564.5
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | sum of deviations: -15165122495.5
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | mean x: 1752499501.5
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | mean y: 2522424.214285714
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | -- intersect: 91076100051.68497
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | intersect: 91076100051.68497
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | chi2: 1.387428840929729
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | current chi2=1.387428840929729 (change=0.40843710416249457 %)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | right removable region: 97
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | sum of square deviations: 338804492.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | sum of deviations: -34500425506.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | mean x: 1752499959.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,216 | INFO     | mean y: 2520483.427184466
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | -- intersect: 178459405537.79523
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | intersect: 178459405537.79523
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | chi2: 0.8745077607010648
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | current chi2=0.8745077607010648 (change=57.114245033360156 %)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | sum of square deviations: 291817564.5
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | sum of deviations: -30558376146.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | mean x: 1752500111.5
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | mean y: 2507664.551020408
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | -- intersect: 183519759941.26907
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | intersect: 183519759941.26907
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | chi2: 0.875684265432175
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | current chi2=0.875684265432175 (change=-0.13453336653834028 %)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | left removable region: 20
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | sum of square deviations: 141539398.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | sum of deviations: -13828743310.000002
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | mean x: 1752500081.0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,217 | INFO     | mean y: 2508672.909090909
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | -- intersect: 171226027448.24832
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | intersect: 171226027448.24832
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | chi2: 0.17308065078473556
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | -- intersect: 171226027448.24832
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | current memory leak: -97.70 B/s (using 77 data points, chi2=0.17)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | could have reported an average CPU frequency of 2868 MHz (7 samples)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | ..............................
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | . Timing measurements:
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | . get job = 0 s
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | . initial setup = 2 s
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | . payload setup = 5 s
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | . stage-in = 0 s
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | . payload execution = 6538 s
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | . stage-out = 0 s
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | . log creation = 0 s
[2025-07-14 16:25:25] 2025-07-14 14:24:53,218 | INFO     | ..............................
[2025-07-14 16:25:25] 2025-07-14 14:24:53,632 | INFO     | 
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | job summary report
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | --------------------------------------------------
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | PanDA job id: 6720715029
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | task id: 45482148
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | errors: (none)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | pilot state: finished 
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | transexitcode: 0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | exeerrorcode: 0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | exeerrordiag: 
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | exitcode: 0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | exitmsg: OK
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | cpuconsumptiontime: 25232 s
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | nevents: 400
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | neventsw: 0
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | pid: 1089559
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | pgrp: 1089559
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | corecount: 4
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | event service: False
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | sizes: {0: 2393408, 1: 2393607, 3: 2393869, 11: 2393897, 6547: 2421100, 6548: 2430295, 6550: 2430295, 6559: 2430489}
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | --------------------------------------------------
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | 
[2025-07-14 16:25:25] 2025-07-14 14:24:53,633 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,650 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,650 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-14 16:25:25] 2025-07-14 14:24:53,650 | INFO     | job 6720715029 has completed (purged errors)
[2025-07-14 16:25:25] 2025-07-14 14:24:53,650 | INFO     | overall cleanup function is called
[2025-07-14 16:25:25] 2025-07-14 14:24:54,657 | INFO     | --- collectZombieJob: --- 10, [1089559]
[2025-07-14 16:25:25] 2025-07-14 14:24:54,657 | INFO     | zombie collector waiting for pid 1089559
[2025-07-14 16:25:25] 2025-07-14 14:24:54,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-14 16:25:25] 2025-07-14 14:24:54,657 | INFO     | collected zombie processes
[2025-07-14 16:25:25] 2025-07-14 14:24:54,657 | INFO     | will attempt to kill all subprocesses of pid=1089559
[2025-07-14 16:25:25] 2025-07-14 14:24:54,728 | INFO     | process IDs to be killed: [1089559] (in reverse order)
[2025-07-14 16:25:25] 2025-07-14 14:24:54,759 | WARNING  | found no corresponding commands to process id(s)
[2025-07-14 16:25:25] 2025-07-14 14:24:54,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-14 16:25:25] 2025-07-14 14:24:54,761 | INFO     | did not find any defunct processes belonging to 1089559
[2025-07-14 16:25:25] 2025-07-14 14:24:54,764 | INFO     | did not find any defunct processes belonging to 1089559
[2025-07-14 16:25:25] 2025-07-14 14:24:54,765 | INFO     | ready for new job
[2025-07-14 16:25:25] 2025-07-14 14:24:54,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-14 16:25:25] 2025-07-14 14:24:54,766 | INFO     | ***************************************
[2025-07-14 16:25:25] 2025-07-14 14:24:54,766 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-14 16:25:25] 2025-07-14 14:24:54,766 | INFO     | ***************************************
[2025-07-14 16:25:25] 2025-07-14 14:24:54,766 | INFO     | 
[2025-07-14 16:25:25] 2025-07-14 14:24:54,767 | INFO     | architecture information:
[2025-07-14 16:25:25] 2025-07-14 14:24:54,767 | INFO     | executing command: cat /etc/os-release
[2025-07-14 16:25:25] 2025-07-14 14:24:54,777 | INFO     | cat /etc/os-release:
[2025-07-14 16:25:25] NAME="CentOS Linux"
[2025-07-14 16:25:25] VERSION="7 (Core)"
[2025-07-14 16:25:25] ID="centos"
[2025-07-14 16:25:25] ID_LIKE="rhel fedora"
[2025-07-14 16:25:25] VERSION_ID="7"
[2025-07-14 16:25:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-14 16:25:25] ANSI_COLOR="0;31"
[2025-07-14 16:25:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-14 16:25:25] HOME_URL="https://www.centos.org/"
[2025-07-14 16:25:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-14 16:25:25] 
[2025-07-14 16:25:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-14 16:25:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-14 16:25:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-14 16:25:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-14 16:25:25] 
[2025-07-14 16:25:25] 2025-07-14 14:24:54,777 | INFO     | ***************************************
[2025-07-14 16:25:25] 2025-07-14 14:24:55,280 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-07-14 16:25:25] 2025-07-14 14:24:55,291 | INFO     | sufficient remaining disk space (3215248588800 B)
[2025-07-14 16:25:25] 2025-07-14 14:24:55,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-14 16:25:25] 2025-07-14 14:24:55,291 | INFO     | current server update state: UPDATING_FINAL
[2025-07-14 16:25:25] 2025-07-14 14:24:55,291 | INFO     | update_server=False
[2025-07-14 16:25:25] 2025-07-14 14:24:55,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-14 16:25:25] 2025-07-14 14:24:55,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-14 16:25:25] 2025-07-14 14:24:55,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-14 16:25:25] 2025-07-14 14:24:55,436 | INFO     | all payload control threads have been joined
[2025-07-14 16:25:25] 2025-07-14 14:24:55,515 | INFO     | all data control threads have been joined
[2025-07-14 16:25:25] 2025-07-14 14:24:56,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-14 16:25:25] 2025-07-14 14:24:56,067 | INFO     | aborting loop
[2025-07-14 16:25:25] 2025-07-14 14:24:56,080 | INFO     | all job control threads have been joined
[2025-07-14 16:25:25] 2025-07-14 14:24:56,296 | INFO     | [job] retrieve thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:56,320 | INFO     | [job] create_data_payload thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:56,339 | INFO     | [payload] validate_pre thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:56,441 | INFO     | [payload] control thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:56,520 | INFO     | [data] control thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:56,919 | INFO     | [data] copytool_in thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:57,071 | INFO     | [job] job monitor thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:57,085 | INFO     | [job] control thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:57,201 | INFO     | [payload] validate_post thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:57,375 | INFO     | [data] copytool_out thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:57,410 | INFO     | [payload] failed_post thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:57,674 | INFO     | [job] validate thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:57,763 | INFO     | [payload] execute_payloads thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:58,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-14 16:25:25] 2025-07-14 14:24:59,278 | INFO     | [job] queue monitor thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:24:59,297 | INFO     | [data] queue_monitor thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:25:05,581 | INFO     | job.realtimelogging is not enabled
[2025-07-14 16:25:25] 2025-07-14 14:25:06,582 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-14 16:25:25] 2025-07-14 14:25:06,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125862833547072)>', '<ExcThread(monitor, started 125862431139584)>']
[2025-07-14 16:25:25] 2025-07-14 14:25:12,004 | INFO     | all workflow threads have been joined
[2025-07-14 16:25:25] 2025-07-14 14:25:12,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-14 16:25:25] 2025-07-14 14:25:12,005 | INFO     | traces error code: 0
[2025-07-14 16:25:25] 2025-07-14 14:25:12,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-14 16:25:25] 2025-07-14 14:25:24,946 | INFO     | PID=1082929 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 16:25:25] 2025-07-14 14:25:24,946 | INFO     | found 0 job(s) in 20 queues
[2025-07-14 16:25:25] 2025-07-14 14:25:24,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-14 16:25:25] 2025-07-14 14:25:24,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-14 16:25:25] 2025-07-14 14:25:24,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-14 16:25:25] 2025-07-14 14:25:24,946 | INFO     | [monitor] control thread has ended
[2025-07-14 16:25:25] 2025-07-14 14:25:25,018 [wrapper] ==== pilot stdout END ====
[2025-07-14 16:25:25] 2025-07-14 14:25:25,020 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-14 16:25:25] 2025-07-14 14:25:25,022 [wrapper] pilotpid: 1082929
[2025-07-14 16:25:25] 2025-07-14 14:25:25,024 [wrapper] Pilot exit status: 0
[2025-07-14 16:25:25] 2025-07-14 14:25:25,030 [wrapper] pandaids: 6720715029
[2025-07-14 16:25:25] 2025-07-14 14:25:25,051 [wrapper] cleanup supervisor_pilot 1110625 1082930
[2025-07-14 16:25:25] 2025-07-14 14:25:25,052 [wrapper] Test setup, not cleaning
[2025-07-14 16:25:25] 2025-07-14 14:25:25,054 [wrapper] apfmon messages muted
[2025-07-14 16:25:25] 2025-07-14 14:25:25,056 [wrapper] ==== wrapper stdout END ====
[2025-07-14 16:25:25] 2025-07-14 14:25:25,057 [wrapper] ==== wrapper stderr END ====
[2025-07-14 16:25:25]  *** Error codes and diagnostics ***
[2025-07-14 16:25:25]     "exeErrorCode": 0,
[2025-07-14 16:25:25]     "exeErrorDiag": "",
[2025-07-14 16:25:25]     "pilotErrorCode": 0,
[2025-07-14 16:25:25]     "pilotErrorDiag": "",
[2025-07-14 16:25:25]  *** Listing of results directory ***
[2025-07-14 16:25:25] insgesamt 577344
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc      5112 Jul  6 06:59 queuedata.json
[2025-07-14 16:25:25] -rwx------ 1 boinc boinc     36292 Jul  6 06:59 runpilot2-wrapper.sh
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc    530466 Jul  6 06:59 pilot3.tar.gz
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc       100 Jul 14 14:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-14 16:25:25] -rwxr-xr-x 1 boinc boinc      7986 Jul 14 14:34 run_atlas
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc       105 Jul 14 14:34 job.xml
[2025-07-14 16:25:25] -rw-r--r-- 2 boinc boinc 315975226 Jul 14 14:34 EVNT.45482146._000388.pool.root.1
[2025-07-14 16:25:25] -rw-r--r-- 2 boinc boinc     15095 Jul 14 14:34 start_atlas.sh
[2025-07-14 16:25:25] drwxrwx--x 2 boinc boinc      4096 Jul 14 14:34 shared
[2025-07-14 16:25:25] -rw-r--r-- 2 boinc boinc    542904 Jul 14 14:34 input.tar.gz
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc      9255 Jul 14 14:34 init_data.xml
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc         0 Jul 14 14:34 boinc_lockfile
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc      2615 Jul 14 14:34 pandaJob.out
[2025-07-14 16:25:25] -rw------- 1 boinc boinc    976370 Jul 14 14:35 agis_schedconf.cvmfs.json
[2025-07-14 16:25:25] -rw------- 1 boinc boinc   1588641 Jul 14 14:35 agis_ddmendpoints.agis.ALL.json
[2025-07-14 16:25:25] drwx------ 4 boinc boinc      4096 Jul 14 14:35 pilot3
[2025-07-14 16:25:25] -rw------- 1 boinc boinc 269553067 Jul 14 16:24 HITS.45482148._009706.pool.root.1
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc       529 Jul 14 16:24 boinc_task_state.xml
[2025-07-14 16:25:25] -rw------- 1 boinc boinc      1018 Jul 14 16:24 memory_monitor_summary.json
[2025-07-14 16:25:25] -rw------- 1 boinc boinc    269927 Jul 14 16:24 log.45482148._009706.job.log.tgz.1
[2025-07-14 16:25:25] -rw------- 1 boinc boinc      7726 Jul 14 16:24 heartbeat.json
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc      8192 Jul 14 16:25 boinc_mmap_file
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc        27 Jul 14 16:25 wrapper_checkpoint.txt
[2025-07-14 16:25:25] -rw------- 1 boinc boinc        95 Jul 14 16:25 pilot_heartbeat.json
[2025-07-14 16:25:25] -rw------- 1 boinc boinc       747 Jul 14 16:25 pilotlog.txt
[2025-07-14 16:25:25] -rw------- 1 boinc boinc    627240 Jul 14 16:25 log.45482148._009706.job.log.1
[2025-07-14 16:25:25] -rw------- 1 boinc boinc       357 Jul 14 16:25 output.list
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc       620 Jul 14 16:25 runtime_log
[2025-07-14 16:25:25] -rw------- 1 boinc boinc    921600 Jul 14 16:25 result.tar.gz
[2025-07-14 16:25:25] -rw------- 1 boinc boinc       636 Jul 14 16:25 VgVMDmOeWs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms1BLDmoLxybm.diag
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc      8688 Jul 14 16:25 runtime_log.err
[2025-07-14 16:25:25] -rw-r--r-- 1 boinc boinc     20972 Jul 14 16:25 stderr.txt
[2025-07-14 16:25:25] HITS file was successfully produced:
[2025-07-14 16:25:25] -rw------- 1 boinc boinc 269553067 Jul 14 16:24 shared/HITS.pool.root.1
[2025-07-14 16:25:25]  *** Contents of shared directory: ***
[2025-07-14 16:25:25] insgesamt 573264
[2025-07-14 16:25:25] -rw-r--r-- 2 boinc boinc 315975226 Jul 14 14:34 ATLAS.root_0
[2025-07-14 16:25:25] -rw-r--r-- 2 boinc boinc     15095 Jul 14 14:34 start_atlas.sh
[2025-07-14 16:25:25] -rw-r--r-- 2 boinc boinc    542904 Jul 14 14:34 input.tar.gz
[2025-07-14 16:25:25] -rw------- 1 boinc boinc 269553067 Jul 14 16:24 HITS.pool.root.1
[2025-07-14 16:25:25] -rw------- 1 boinc boinc    921600 Jul 14 16:25 result.tar.gz
16:25:26 (1078776): run_atlas exited; CPU time 25251.333817
16:25:26 (1078776): called boinc_finish(0)

</stderr_txt>
]]>

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