Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:27:57 (2862410): wrapper (7.7.26015): starting
13:27:57 (2862410): wrapper: running run_atlas (--nthreads 2)
[2025-07-13 13:27:57] Arguments: --nthreads 2
[2025-07-13 13:27:57] Threads: 2
[2025-07-13 13:27:57] Checking for CVMFS
[2025-07-13 13:27:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-13 13:27:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-13 13:27:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-13 13:27:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-13 13:27:57] 2.9.2.0 2815083 213 48312 148276 2 56 32994736 36864001 0 130560 0 94661 99.969 6893 4458 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-13 13:27:57] CVMFS is ok
[2025-07-13 13:27:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-13 13:27:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-13 13:27:57] Further information can be found at the LHC@home message board.
[2025-07-13 13:27:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-13 13:27:57] Checking for apptainer binary...
[2025-07-13 13:27:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-13 13:27:57] Running /usr/bin/apptainer --version
[2025-07-13 13:27:57] apptainer version 1.4.1-1.1
[2025-07-13 13:27:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-13 13:27:57] cosA125b
[2025-07-13 13:27:57] apptainer works
[2025-07-13 13:27:57] Set ATHENA_PROC_NUMBER=2
[2025-07-13 13:27:57] Set ATHENA_CORE_NUMBER=2
[2025-07-13 13:27:57] Starting ATLAS job with PandaID=6720595050
[2025-07-13 13:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-13 17:08:09]  *** The last 200 lines of the pilot log: ***
[2025-07-13 17:08:09] 2025-07-13 15:07:34,577 | INFO     | executing command: lscpu
[2025-07-13 17:08:09] 2025-07-13 15:07:34,593 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-13 17:08:09] 2025-07-13 15:07:36,184 | INFO     | monitor loop #1006: job 0:6720595050 is in state 'finished'
[2025-07-13 17:08:09] 2025-07-13 15:07:36,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,601 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-13 17:08:09] 2025-07-13 15:07:37,602 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 4055.7435
[2025-07-13 17:08:09] 2025-07-13 15:07:37,603 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6720595050/memory_monitor_summary.json (trf name=prmon)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,603 | INFO     | extracted standard info from prmon json
[2025-07-13 17:08:09] 2025-07-13 15:07:37,603 | INFO     | extracted standard memory fields from prmon json
[2025-07-13 17:08:09] 2025-07-13 15:07:37,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-13 17:08:09] 2025-07-13 15:07:37,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-13 17:08:09] 2025-07-13 15:07:37,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-13 17:08:09] 2025-07-13 15:07:37,605 | INFO     | fitting pss+swap vs Time
[2025-07-13 17:08:09] 2025-07-13 15:07:37,605 | INFO     | sum of square deviations: 3124858590.0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,606 | INFO     | sum of deviations: -6605930980.500002
[2025-07-13 17:08:09] 2025-07-13 15:07:37,606 | INFO     | mean x: 1752412661.5
[2025-07-13 17:08:09] 2025-07-13 15:07:37,606 | INFO     | mean y: 2331561.7916666665
[2025-07-13 17:08:09] 2025-07-13 15:07:37,606 | INFO     | -- intersect: 3706920668.0856934
[2025-07-13 17:08:09] 2025-07-13 15:07:37,606 | INFO     | intersect: 3706920668.0856934
[2025-07-13 17:08:09] 2025-07-13 15:07:37,606 | INFO     | chi2: 1.7573237202358205
[2025-07-13 17:08:09] 2025-07-13 15:07:37,606 | INFO     | sum of square deviations: 2912836010.0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | sum of deviations: -6761500835.999997
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | mean x: 1752412509.0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | mean y: 2331449.848341232
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | -- intersect: 4070167264.821101
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | intersect: 4070167264.821101
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | chi2: 1.7557137749149434
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | current chi2=1.7557137749149434 (change=0.09161347464547175 %)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | right removable region: 210
[2025-07-13 17:08:09] 2025-07-13 15:07:37,607 | INFO     | sum of square deviations: 2912836010.0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,608 | INFO     | sum of deviations: -33462748162.000008
[2025-07-13 17:08:09] 2025-07-13 15:07:37,608 | INFO     | mean x: 1752412814.0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,608 | INFO     | mean y: 2350609.744075829
[2025-07-13 17:08:09] 2025-07-13 15:07:37,608 | INFO     | -- intersect: 20134122006.906857
[2025-07-13 17:08:09] 2025-07-13 15:07:37,608 | INFO     | intersect: 20134122006.906857
[2025-07-13 17:08:09] 2025-07-13 15:07:37,608 | INFO     | chi2: 0.3209223516534653
[2025-07-13 17:08:09] 2025-07-13 15:07:37,608 | INFO     | current chi2=0.3209223516534653 (change=81.73800603963852 %)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,608 | INFO     | sum of square deviations: 2710627567.5
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | sum of deviations: -22932639784.5
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | mean x: 1752412966.5
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | mean y: 2342664.344660194
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | -- intersect: 14828228668.11473
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | intersect: 14828228668.11473
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | chi2: 0.26332385271526737
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | current chi2=0.26332385271526737 (change=17.947799098890208 %)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | left removable region: 20
[2025-07-13 17:08:09] 2025-07-13 15:07:37,609 | INFO     | sum of square deviations: 2126802667.5
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | sum of deviations: -750345566.9999998
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | mean x: 1752413088.5
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | mean y: 2323946.705263158
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | -- intersect: 620583182.7886941
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | intersect: 620583182.7886941
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | chi2: 0.061261779618072304
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | -- intersect: 620583182.7886941
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | current memory leak: -0.35 B/s (using 190 data points, chi2=0.06)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | could have reported an average CPU frequency of 4040 MHz (11 samples)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | ..............................
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | . Timing measurements:
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | . get job = 0 s
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | . initial setup = 1 s
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | . payload setup = 4 s
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | . stage-in = 0 s
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | . payload execution = 13145 s
[2025-07-13 17:08:09] 2025-07-13 15:07:37,610 | INFO     | . stage-out = 0 s
[2025-07-13 17:08:09] 2025-07-13 15:07:37,611 | INFO     | . log creation = 0 s
[2025-07-13 17:08:09] 2025-07-13 15:07:37,611 | INFO     | ..............................
[2025-07-13 17:08:09] 2025-07-13 15:07:37,747 | INFO     | 
[2025-07-13 17:08:09] 2025-07-13 15:07:37,748 | INFO     | job summary report
[2025-07-13 17:08:09] 2025-07-13 15:07:37,748 | INFO     | --------------------------------------------------
[2025-07-13 17:08:09] 2025-07-13 15:07:37,748 | INFO     | PanDA job id: 6720595050
[2025-07-13 17:08:09] 2025-07-13 15:07:37,748 | INFO     | task id: 45482062
[2025-07-13 17:08:09] 2025-07-13 15:07:37,748 | INFO     | errors: (none)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,749 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-13 17:08:09] 2025-07-13 15:07:37,749 | INFO     | pilot state: finished 
[2025-07-13 17:08:09] 2025-07-13 15:07:37,749 | INFO     | transexitcode: 0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,749 | INFO     | exeerrorcode: 0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,749 | INFO     | exeerrordiag: 
[2025-07-13 17:08:09] 2025-07-13 15:07:37,749 | INFO     | exitcode: 0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,750 | INFO     | exitmsg: OK
[2025-07-13 17:08:09] 2025-07-13 15:07:37,750 | INFO     | cpuconsumptiontime: 25861 s
[2025-07-13 17:08:09] 2025-07-13 15:07:37,750 | INFO     | nevents: 400
[2025-07-13 17:08:09] 2025-07-13 15:07:37,750 | INFO     | neventsw: 0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,750 | INFO     | pid: 2872518
[2025-07-13 17:08:09] 2025-07-13 15:07:37,750 | INFO     | pgrp: 2872518
[2025-07-13 17:08:09] 2025-07-13 15:07:37,750 | INFO     | corecount: 2
[2025-07-13 17:08:09] 2025-07-13 15:07:37,751 | INFO     | event service: False
[2025-07-13 17:08:09] 2025-07-13 15:07:37,751 | INFO     | sizes: {0: 2393441, 3: 2393703, 11: 2393731, 13152: 2424044, 13153: 2424043, 13155: 2433287, 13161: 2433425}
[2025-07-13 17:08:09] 2025-07-13 15:07:37,751 | INFO     | --------------------------------------------------
[2025-07-13 17:08:09] 2025-07-13 15:07:37,751 | INFO     | 
[2025-07-13 17:08:09] 2025-07-13 15:07:37,751 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-13 17:08:09] 2025-07-13 15:07:37,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,764 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,764 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | job 6720595050 has completed (purged errors)
[2025-07-13 17:08:09] 2025-07-13 15:07:37,765 | INFO     | overall cleanup function is called
[2025-07-13 17:08:09] 2025-07-13 15:07:38,771 | INFO     | --- collectZombieJob: --- 10, [2872518]
[2025-07-13 17:08:09] 2025-07-13 15:07:38,772 | INFO     | zombie collector waiting for pid 2872518
[2025-07-13 17:08:09] 2025-07-13 15:07:38,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-13 17:08:09] 2025-07-13 15:07:38,772 | INFO     | collected zombie processes
[2025-07-13 17:08:09] 2025-07-13 15:07:38,773 | INFO     | will attempt to kill all subprocesses of pid=2872518
[2025-07-13 17:08:09] 2025-07-13 15:07:38,817 | INFO     | process IDs to be killed: [2872518] (in reverse order)
[2025-07-13 17:08:09] 2025-07-13 15:07:38,842 | WARNING  | found no corresponding commands to process id(s)
[2025-07-13 17:08:09] 2025-07-13 15:07:38,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-13 17:08:09] 2025-07-13 15:07:38,844 | INFO     | did not find any defunct processes belonging to 2872518
[2025-07-13 17:08:09] 2025-07-13 15:07:38,845 | INFO     | did not find any defunct processes belonging to 2872518
[2025-07-13 17:08:09] 2025-07-13 15:07:38,845 | INFO     | ready for new job
[2025-07-13 17:08:09] 2025-07-13 15:07:38,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-13 17:08:09] 2025-07-13 15:07:38,846 | INFO     | ***************************************
[2025-07-13 17:08:09] 2025-07-13 15:07:38,846 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-13 17:08:09] 2025-07-13 15:07:38,846 | INFO     | ***************************************
[2025-07-13 17:08:09] 2025-07-13 15:07:38,846 | INFO     | 
[2025-07-13 17:08:09] 2025-07-13 15:07:38,846 | INFO     | architecture information:
[2025-07-13 17:08:09] 2025-07-13 15:07:38,846 | INFO     | executing command: cat /etc/os-release
[2025-07-13 17:08:09] 2025-07-13 15:07:38,856 | INFO     | cat /etc/os-release:
[2025-07-13 17:08:09] NAME="CentOS Linux"
[2025-07-13 17:08:09] VERSION="7 (Core)"
[2025-07-13 17:08:09] ID="centos"
[2025-07-13 17:08:09] ID_LIKE="rhel fedora"
[2025-07-13 17:08:09] VERSION_ID="7"
[2025-07-13 17:08:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-13 17:08:09] ANSI_COLOR="0;31"
[2025-07-13 17:08:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-13 17:08:09] HOME_URL="https://www.centos.org/"
[2025-07-13 17:08:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-13 17:08:09] 
[2025-07-13 17:08:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-13 17:08:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-13 17:08:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-13 17:08:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-13 17:08:09] 
[2025-07-13 17:08:09] 2025-07-13 15:07:38,856 | INFO     | ***************************************
[2025-07-13 17:08:09] 2025-07-13 15:07:39,357 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-13 17:08:09] 2025-07-13 15:07:39,370 | INFO     | sufficient remaining disk space (323838017536 B)
[2025-07-13 17:08:09] 2025-07-13 15:07:39,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-13 17:08:09] 2025-07-13 15:07:39,371 | INFO     | current server update state: UPDATING_FINAL
[2025-07-13 17:08:09] 2025-07-13 15:07:39,371 | INFO     | update_server=False
[2025-07-13 17:08:09] 2025-07-13 15:07:39,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-13 17:08:09] 2025-07-13 15:07:39,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-13 17:08:09] 2025-07-13 15:07:39,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-13 17:08:09] 2025-07-13 15:07:39,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-13 17:08:09] 2025-07-13 15:07:39,694 | INFO     | aborting loop
[2025-07-13 17:08:09] 2025-07-13 15:07:39,938 | INFO     | all data control threads have been joined
[2025-07-13 17:08:09] 2025-07-13 15:07:40,076 | INFO     | all payload control threads have been joined
[2025-07-13 17:08:09] 2025-07-13 15:07:40,377 | INFO     | [job] retrieve thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:40,377 | INFO     | [job] queue monitor thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:40,566 | INFO     | [payload] validate_pre thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:40,692 | INFO     | all job control threads have been joined
[2025-07-13 17:08:09] 2025-07-13 15:07:40,700 | INFO     | [job] job monitor thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:40,725 | INFO     | [payload] execute_payloads thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:40,944 | INFO     | [data] control thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:41,082 | INFO     | [payload] control thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:41,202 | INFO     | [payload] failed_post thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:41,401 | INFO     | [data] copytool_in thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:41,515 | INFO     | [data] copytool_out thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:41,656 | INFO     | [job] create_data_payload thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:41,678 | INFO     | [job] validate thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:41,698 | INFO     | [job] control thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:41,762 | INFO     | [payload] validate_post thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:42,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-13 17:08:09] 2025-07-13 15:07:46,536 | INFO     | [data] queue_monitor thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:49,920 | INFO     | job.realtimelogging is not enabled
[2025-07-13 17:08:09] 2025-07-13 15:07:50,926 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-13 17:08:09] 2025-07-13 15:07:52,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140036097226560)>', '<ExcThread(monitor, started 140035378632448)>']
[2025-07-13 17:08:09] 2025-07-13 15:07:57,614 | INFO     | all workflow threads have been joined
[2025-07-13 17:08:09] 2025-07-13 15:07:57,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-13 17:08:09] 2025-07-13 15:07:57,616 | INFO     | traces error code: 0
[2025-07-13 17:08:09] 2025-07-13 15:07:57,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-13 17:08:09] 2025-07-13 15:08:09,670 | INFO     | PID=2866037 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-13 17:08:09] 2025-07-13 15:08:09,671 | INFO     | found 0 job(s) in 20 queues
[2025-07-13 17:08:09] 2025-07-13 15:08:09,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-13 17:08:09] 2025-07-13 15:08:09,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-13 17:08:09] 2025-07-13 15:08:09,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-13 17:08:09] 2025-07-13 15:08:09,671 | INFO     | [monitor] control thread has ended
[2025-07-13 17:08:09] 2025-07-13 15:08:09,720 [wrapper] ==== pilot stdout END ====
[2025-07-13 17:08:09] 2025-07-13 15:08:09,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-13 17:08:09] 2025-07-13 15:08:09,726 [wrapper] pilotpid: 2866037
[2025-07-13 17:08:09] 2025-07-13 15:08:09,728 [wrapper] Pilot exit status: 0
[2025-07-13 17:08:09] 2025-07-13 15:08:09,735 [wrapper] pandaids: 6720595050
[2025-07-13 17:08:09] 2025-07-13 15:08:09,751 [wrapper] cleanup supervisor_pilot 2903592 2866038
[2025-07-13 17:08:09] 2025-07-13 15:08:09,754 [wrapper] Test setup, not cleaning
[2025-07-13 17:08:09] 2025-07-13 15:08:09,757 [wrapper] apfmon messages muted
[2025-07-13 17:08:09] 2025-07-13 15:08:09,759 [wrapper] ==== wrapper stdout END ====
[2025-07-13 17:08:09] 2025-07-13 15:08:09,762 [wrapper] ==== wrapper stderr END ====
[2025-07-13 17:08:09]  *** Error codes and diagnostics ***
[2025-07-13 17:08:09]     "exeErrorCode": 0,
[2025-07-13 17:08:09]     "exeErrorDiag": "",
[2025-07-13 17:08:09]     "pilotErrorCode": 0,
[2025-07-13 17:08:09]     "pilotErrorDiag": "",
[2025-07-13 17:08:09]  *** Listing of results directory ***
[2025-07-13 17:08:09] total 575856
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc    530466 Jul  5 03:17 pilot3.tar.gz
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc      5112 Jul  5 03:43 queuedata.json
[2025-07-13 17:08:09] -rwx------ 1 boinc boinc     36292 Jul  5 03:46 runpilot2-wrapper.sh
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc       100 Jul 13 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-13 17:08:09] -rwxr-xr-x 1 boinc boinc      7986 Jul 13 13:27 run_atlas
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc       105 Jul 13 13:27 job.xml
[2025-07-13 17:08:09] -rw-r--r-- 2 boinc boinc 318774549 Jul 13 13:27 EVNT.45482060._000273.pool.root.1
[2025-07-13 17:08:09] -rw-r--r-- 2 boinc boinc    542887 Jul 13 13:27 input.tar.gz
[2025-07-13 17:08:09] -rw-r--r-- 2 boinc boinc     15095 Jul 13 13:27 start_atlas.sh
[2025-07-13 17:08:09] drwxrwx--x 2 boinc boinc      4096 Jul 13 13:27 shared
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc         0 Jul 13 13:27 boinc_setup_complete
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc      6273 Jul 13 13:27 init_data.xml
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc         0 Jul 13 13:27 boinc_lockfile
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc      2531 Jul 13 13:27 pandaJob.out
[2025-07-13 17:08:09] -rw------- 1 boinc boinc    976219 Jul 13 13:28 agis_schedconf.cvmfs.json
[2025-07-13 17:08:09] drwx------ 4 boinc boinc      4096 Jul 13 13:28 pilot3
[2025-07-13 17:08:09] -rw------- 1 boinc boinc 264020574 Jul 13 17:07 HITS.45482062._006713.pool.root.1
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc       530 Jul 13 17:07 boinc_task_state.xml
[2025-07-13 17:08:09] -rw------- 1 boinc boinc      1016 Jul 13 17:07 memory_monitor_summary.json
[2025-07-13 17:08:09] -rw------- 1 boinc boinc   1588641 Jul 13 17:07 agis_ddmendpoints.agis.ALL.json
[2025-07-13 17:08:09] -rw------- 1 boinc boinc    294732 Jul 13 17:07 log.45482062._006713.job.log.tgz.1
[2025-07-13 17:08:09] -rw------- 1 boinc boinc      7752 Jul 13 17:07 heartbeat.json
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc      8192 Jul 13 17:08 boinc_mmap_file
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc        28 Jul 13 17:08 wrapper_checkpoint.txt
[2025-07-13 17:08:09] -rw------- 1 boinc boinc       747 Jul 13 17:08 pilotlog.txt
[2025-07-13 17:08:09] -rw------- 1 boinc boinc        95 Jul 13 17:08 pilot_heartbeat.json
[2025-07-13 17:08:09] -rw------- 1 boinc boinc   1209231 Jul 13 17:08 log.45482062._006713.job.log.1
[2025-07-13 17:08:09] -rw------- 1 boinc boinc       357 Jul 13 17:08 output.list
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc       620 Jul 13 17:08 runtime_log
[2025-07-13 17:08:09] -rw------- 1 boinc boinc   1525760 Jul 13 17:08 result.tar.gz
[2025-07-13 17:08:09] -rw------- 1 boinc boinc       664 Jul 13 17:08 t2ULDmVA7r7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRV9KDmERDVNo.diag
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc      8745 Jul 13 17:08 runtime_log.err
[2025-07-13 17:08:09] -rw-r--r-- 1 boinc boinc     21190 Jul 13 17:08 stderr.txt
[2025-07-13 17:08:09] HITS file was successfully produced:
[2025-07-13 17:08:09] -rw------- 1 boinc boinc 264020574 Jul 13 17:07 shared/HITS.pool.root.1
[2025-07-13 17:08:09]  *** Contents of shared directory: ***
[2025-07-13 17:08:09] total 571188
[2025-07-13 17:08:09] -rw-r--r-- 2 boinc boinc 318774549 Jul 13 13:27 ATLAS.root_0
[2025-07-13 17:08:09] -rw-r--r-- 2 boinc boinc    542887 Jul 13 13:27 input.tar.gz
[2025-07-13 17:08:09] -rw-r--r-- 2 boinc boinc     15095 Jul 13 13:27 start_atlas.sh
[2025-07-13 17:08:09] -rw------- 1 boinc boinc 264020574 Jul 13 17:07 HITS.pool.root.1
[2025-07-13 17:08:09] -rw------- 1 boinc boinc   1525760 Jul 13 17:08 result.tar.gz
17:08:11 (2862410): run_atlas exited; CPU time 25936.587311
17:08:11 (2862410): called boinc_finish(0)

</stderr_txt>
]]>

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