Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:11:22 (250809): wrapper (7.7.26015): starting
22:11:22 (250809): wrapper: running run_atlas (--nthreads 8)
[2025-07-12 22:11:22] Arguments: --nthreads 8
[2025-07-12 22:11:22] Threads: 8
[2025-07-12 22:11:22] Checking for CVMFS
[2025-07-12 22:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-12 22:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-12 22:11:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-12 22:11:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-12 22:11:22] 2.11.2.0 7107 36758 227612 148262 2 231 10389652 18432000 4165 130560 0 128259034 99.474 182288621 56139 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-12 22:11:22] CVMFS is ok
[2025-07-12 22:11:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-12 22:11:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-12 22:11:22] Further information can be found at the LHC@home message board.
[2025-07-12 22:11:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-12 22:11:22] Checking for apptainer binary...
[2025-07-12 22:11:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-12 22:11:22] Running /usr/bin/apptainer --version
[2025-07-12 22:11:22] apptainer version 1.3.2-1.el7
[2025-07-12 22:11:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-12 22:11:24] c-211-35-1.aglt2.org
[2025-07-12 22:11:24] apptainer works
[2025-07-12 22:11:24] Set ATHENA_PROC_NUMBER=8
[2025-07-12 22:11:24] Set ATHENA_CORE_NUMBER=8
[2025-07-12 22:11:24] Starting ATLAS job with PandaID=6721001116
[2025-07-12 22:11:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-12 23:25:19]  *** The last 200 lines of the pilot log: ***
[2025-07-12 23:25:19]  is_tar=False
[2025-07-12 23:25:19]  lfn=log.45482148._012427.job.log.tgz.1
[2025-07-12 23:25:19]  mtime=0
[2025-07-12 23:25:19]  protocol_id=None
[2025-07-12 23:25:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-12 23:25:19]  replicas=None
[2025-07-12 23:25:19]  scope=mc23_13p6TeV
[2025-07-12 23:25:19]  status=None
[2025-07-12 23:25:19]  status_code=0
[2025-07-12 23:25:19]  storage_token=
[2025-07-12 23:25:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6721001116/log.45482148._012427.job.log.tgz.1
[2025-07-12 23:25:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/eb/log.45482148._012427.job.log.tgz.1
[2025-07-12 23:25:19]  workdir=None
[2025-07-12 23:25:19] ]
[2025-07-12 23:25:19] 2025-07-13 03:24:41,936 | INFO     | transferring file log.45482148._012427.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6721001116/log.45482148._012427.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-12 23:25:19] 2025-07-13 03:24:41,936 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6721001116/log.45482148._012427.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482148._012427.job
[2025-07-12 23:25:19] 2025-07-13 03:24:41,962 | INFO     | adding to output.list: log.45482148._012427.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/eb/log.45482148._012427.job.log.tg
[2025-07-12 23:25:19] 2025-07-13 03:24:41,962 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-12 23:25:19] 2025-07-13 03:24:41,962 | INFO     | summary of transferred files:
[2025-07-12 23:25:19] 2025-07-13 03:24:41,962 | INFO     |  -- lfn=log.45482148._012427.job.log.tgz.1, status_code=0, status=transferred
[2025-07-12 23:25:19] 2025-07-13 03:24:41,962 | INFO     | stage-out finished correctly
[2025-07-12 23:25:19] 2025-07-13 03:24:43,591 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-12 23:25:19] 2025-07-13 03:24:44,035 | INFO     | job 6721001116 has state=finished
[2025-07-12 23:25:19] 2025-07-13 03:24:44,036 | INFO     | preparing for final server update for job 6721001116 in state='finished'
[2025-07-12 23:25:19] 2025-07-13 03:24:44,036 | INFO     | this job has now completed (state=finished)
[2025-07-12 23:25:19] 2025-07-13 03:24:44,037 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-12 23:25:19] 2025-07-13 03:24:44,037 | INFO     | log transfer has been attempted: DONE
[2025-07-12 23:25:19] 2025-07-13 03:24:44,037 | INFO     | job 6721001116 has finished - writing final server update
[2025-07-12 23:25:19] 2025-07-13 03:24:44,037 | INFO     | total number of processed events: 400 (read)
[2025-07-12 23:25:19] 2025-07-13 03:24:44,038 | INFO     | executing command: lscpu
[2025-07-12 23:25:19] 2025-07-13 03:24:44,105 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-12 23:25:19] 2025-07-13 03:24:47,228 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-12 23:25:19] 2025-07-13 03:24:47,234 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 1917.4249895833345
[2025-07-12 23:25:19] 2025-07-13 03:24:47,241 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6721001116/memory_monitor_summary.json (trf name=prmon)
[2025-07-12 23:25:19] 2025-07-13 03:24:47,241 | INFO     | extracted standard info from prmon json
[2025-07-12 23:25:19] 2025-07-13 03:24:47,241 | INFO     | extracted standard memory fields from prmon json
[2025-07-12 23:25:19] 2025-07-13 03:24:47,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-12 23:25:19] 2025-07-13 03:24:47,241 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-12 23:25:19] 2025-07-13 03:24:47,241 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-12 23:25:19] 2025-07-13 03:24:47,242 | INFO     | fitting pss+swap vs Time
[2025-07-12 23:25:19] 2025-07-13 03:24:47,242 | INFO     | sum of square deviations: 85136480.0
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | sum of deviations: 458795152.0
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | mean x: 1752374977.0
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | mean y: 2557879.5384615385
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | -- intersect: -9440880983.96296
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | intersect: -9440880983.96296
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | chi2: 0.001308697823142228
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | -- intersect: -9440880983.96296
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | current memory leak: 5.39 B/s (using 65 data points, chi2=0.00)
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | could have reported an average CPU frequency of 2415 MHz (6 samples)
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | ..............................
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | . Timing measurements:
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | . get job = 0 s
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | . initial setup = 2 s
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | . payload setup = 8 s
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | . stage-in = 0 s
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | . payload execution = 4360 s
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | . stage-out = 0 s
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | . log creation = 0 s
[2025-07-12 23:25:19] 2025-07-13 03:24:47,243 | INFO     | ..............................
[2025-07-12 23:25:19] 2025-07-13 03:24:47,284 | INFO     | 
[2025-07-12 23:25:19] 2025-07-13 03:24:47,284 | INFO     | job summary report
[2025-07-12 23:25:19] 2025-07-13 03:24:47,284 | INFO     | --------------------------------------------------
[2025-07-12 23:25:19] 2025-07-13 03:24:47,284 | INFO     | PanDA job id: 6721001116
[2025-07-12 23:25:19] 2025-07-13 03:24:47,285 | INFO     | task id: 45482148
[2025-07-12 23:25:19] 2025-07-13 03:24:47,285 | INFO     | errors: (none)
[2025-07-12 23:25:19] 2025-07-13 03:24:47,285 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-12 23:25:19] 2025-07-13 03:24:47,285 | INFO     | pilot state: finished 
[2025-07-12 23:25:19] 2025-07-13 03:24:47,285 | INFO     | transexitcode: 0
[2025-07-12 23:25:19] 2025-07-13 03:24:47,285 | INFO     | exeerrorcode: 0
[2025-07-12 23:25:19] 2025-07-13 03:24:47,286 | INFO     | exeerrordiag: 
[2025-07-12 23:25:19] 2025-07-13 03:24:47,286 | INFO     | exitcode: 0
[2025-07-12 23:25:19] 2025-07-13 03:24:47,286 | INFO     | exitmsg: OK
[2025-07-12 23:25:19] 2025-07-13 03:24:47,286 | INFO     | cpuconsumptiontime: 32374 s
[2025-07-12 23:25:19] 2025-07-13 03:24:47,286 | INFO     | nevents: 400
[2025-07-12 23:25:19] 2025-07-13 03:24:47,286 | INFO     | neventsw: 0
[2025-07-12 23:25:19] 2025-07-13 03:24:47,287 | INFO     | pid: 260898
[2025-07-12 23:25:19] 2025-07-13 03:24:47,287 | INFO     | pgrp: 260898
[2025-07-12 23:25:19] 2025-07-13 03:24:47,287 | INFO     | corecount: 8
[2025-07-12 23:25:19] 2025-07-13 03:24:47,287 | INFO     | event service: False
[2025-07-12 23:25:19] 2025-07-13 03:24:47,287 | INFO     | sizes: {0: 2393576, 4: 2393838, 11: 2393866, 4372: 2419903, 4373: 2428901, 4375: 2428957, 4379: 2429279}
[2025-07-12 23:25:19] 2025-07-13 03:24:47,287 | INFO     | --------------------------------------------------
[2025-07-12 23:25:19] 2025-07-13 03:24:47,287 | INFO     | 
[2025-07-12 23:25:19] 2025-07-13 03:24:47,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-12 23:25:19] 2025-07-13 03:24:47,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,314 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-12 23:25:19] 2025-07-13 03:24:47,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-12 23:25:19] 2025-07-13 03:24:47,317 | INFO     | job 6721001116 has completed (purged errors)
[2025-07-12 23:25:19] 2025-07-13 03:24:47,317 | INFO     | overall cleanup function is called
[2025-07-12 23:25:19] 2025-07-13 03:24:47,482 | WARNING  | process 260898 can no longer be monitored (due to stat problems) - aborting
[2025-07-12 23:25:19] 2025-07-13 03:24:47,575 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-12 23:25:19] 2025-07-13 03:24:47,674 | INFO     | number of running child processes to parent process 260898: 1
[2025-07-12 23:25:19] 2025-07-13 03:24:47,674 | INFO     | maximum number of monitored processes: 6
[2025-07-12 23:25:19] 2025-07-13 03:24:47,674 | INFO     | aborting job monitoring since job object (job id=6721001116) has expired
[2025-07-12 23:25:19] 2025-07-13 03:24:48,324 | INFO     | --- collectZombieJob: --- 10, [260898]
[2025-07-12 23:25:19] 2025-07-13 03:24:48,324 | INFO     | zombie collector waiting for pid 260898
[2025-07-12 23:25:19] 2025-07-13 03:24:48,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-12 23:25:19] 2025-07-13 03:24:48,324 | INFO     | collected zombie processes
[2025-07-12 23:25:19] 2025-07-13 03:24:48,324 | INFO     | will attempt to kill all subprocesses of pid=260898
[2025-07-12 23:25:19] 2025-07-13 03:24:48,506 | INFO     | process IDs to be killed: [260898] (in reverse order)
[2025-07-12 23:25:19] 2025-07-13 03:24:48,607 | WARNING  | found no corresponding commands to process id(s)
[2025-07-12 23:25:19] 2025-07-13 03:24:48,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-12 23:25:19] 2025-07-13 03:24:48,618 | INFO     | did not find any defunct processes belonging to 260898
[2025-07-12 23:25:19] 2025-07-13 03:24:48,627 | INFO     | did not find any defunct processes belonging to 260898
[2025-07-12 23:25:19] 2025-07-13 03:24:48,627 | INFO     | ready for new job
[2025-07-12 23:25:19] 2025-07-13 03:24:48,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-12 23:25:19] 2025-07-13 03:24:48,629 | INFO     | ***************************************
[2025-07-12 23:25:19] 2025-07-13 03:24:48,629 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-12 23:25:19] 2025-07-13 03:24:48,629 | INFO     | ***************************************
[2025-07-12 23:25:19] 2025-07-13 03:24:48,630 | INFO     | 
[2025-07-12 23:25:19] 2025-07-13 03:24:48,636 | INFO     | architecture information:
[2025-07-12 23:25:19] 2025-07-13 03:24:48,636 | INFO     | executing command: cat /etc/os-release
[2025-07-12 23:25:19] 2025-07-13 03:24:48,659 | INFO     | cat /etc/os-release:
[2025-07-12 23:25:19] NAME="CentOS Linux"
[2025-07-12 23:25:19] VERSION="7 (Core)"
[2025-07-12 23:25:19] ID="centos"
[2025-07-12 23:25:19] ID_LIKE="rhel fedora"
[2025-07-12 23:25:19] VERSION_ID="7"
[2025-07-12 23:25:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-12 23:25:19] ANSI_COLOR="0;31"
[2025-07-12 23:25:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-12 23:25:19] HOME_URL="https://www.centos.org/"
[2025-07-12 23:25:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-12 23:25:19] 
[2025-07-12 23:25:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-12 23:25:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-12 23:25:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-12 23:25:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-12 23:25:19] 
[2025-07-12 23:25:19] 2025-07-13 03:24:48,659 | INFO     | ***************************************
[2025-07-12 23:25:19] 2025-07-13 03:24:49,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-12 23:25:19] 2025-07-13 03:24:49,185 | INFO     | sufficient remaining disk space (106295197696 B)
[2025-07-12 23:25:19] 2025-07-13 03:24:49,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-12 23:25:19] 2025-07-13 03:24:49,186 | INFO     | current server update state: UPDATING_FINAL
[2025-07-12 23:25:19] 2025-07-13 03:24:49,186 | INFO     | update_server=False
[2025-07-12 23:25:19] 2025-07-13 03:24:49,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-12 23:25:19] 2025-07-13 03:24:49,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-12 23:25:19] 2025-07-13 03:24:49,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-12 23:25:19] 2025-07-13 03:24:49,187 | INFO     | aborting loop
[2025-07-12 23:25:19] 2025-07-13 03:24:49,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-12 23:25:19] 2025-07-13 03:24:50,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-12 23:25:19] 2025-07-13 03:24:50,168 | INFO     | all data control threads have been joined
[2025-07-12 23:25:19] 2025-07-13 03:24:50,192 | INFO     | [job] retrieve thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:50,192 | INFO     | [job] queue monitor thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:50,193 | INFO     | [job] job monitor thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:50,332 | INFO     | [data] copytool_in thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:50,542 | INFO     | [payload] execute_payloads thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:50,579 | INFO     | all job control threads have been joined
[2025-07-12 23:25:19] 2025-07-13 03:24:50,674 | INFO     | all payload control threads have been joined
[2025-07-12 23:25:19] 2025-07-13 03:24:50,735 | INFO     | [job] create_data_payload thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:50,870 | INFO     | [job] validate thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:51,160 | INFO     | [payload] failed_post thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:51,174 | INFO     | [data] control thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:51,336 | INFO     | [payload] validate_pre thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:51,517 | INFO     | [payload] validate_post thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:51,584 | INFO     | [job] control thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:51,680 | INFO     | [payload] control thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:52,042 | INFO     | [data] copytool_out thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:53,688 | INFO     | [data] queue_monitor thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:24:59,676 | INFO     | job.realtimelogging is not enabled
[2025-07-12 23:25:19] 2025-07-13 03:25:00,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-12 23:25:19] 2025-07-13 03:25:00,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673405495104)>', '<ExcThread(monitor, started 140672979949312)>']
[2025-07-12 23:25:19] 2025-07-13 03:25:05,750 | INFO     | all workflow threads have been joined
[2025-07-12 23:25:19] 2025-07-13 03:25:05,750 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-12 23:25:19] 2025-07-13 03:25:05,751 | INFO     | traces error code: 0
[2025-07-12 23:25:19] 2025-07-13 03:25:05,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-12 23:25:19] 2025-07-13 03:25:19,353 | INFO     | PID=254477 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-12 23:25:19] 2025-07-13 03:25:19,353 | INFO     | .. there are 10 such processes running
[2025-07-12 23:25:19] 2025-07-13 03:25:19,353 | INFO     | found 0 job(s) in 20 queues
[2025-07-12 23:25:19] 2025-07-13 03:25:19,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-12 23:25:19] 2025-07-13 03:25:19,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-12 23:25:19] 2025-07-13 03:25:19,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-12 23:25:19] 2025-07-13 03:25:19,353 | INFO     | [monitor] control thread has ended
[2025-07-12 23:25:19] 2025-07-13 03:25:19,476 [wrapper] ==== pilot stdout END ====
[2025-07-12 23:25:19] 2025-07-13 03:25:19,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-12 23:25:19] 2025-07-13 03:25:19,485 [wrapper] pilotpid: 254477
[2025-07-12 23:25:19] 2025-07-13 03:25:19,488 [wrapper] Pilot exit status: 0
[2025-07-12 23:25:19] 2025-07-13 03:25:19,502 [wrapper] pandaids: 6721001116
[2025-07-12 23:25:19] 2025-07-13 03:25:19,567 [wrapper] cleanup supervisor_pilot   6833 254478
[2025-07-12 23:25:19] 2025-07-13 03:25:19,570 [wrapper] Test setup, not cleaning
[2025-07-12 23:25:19] 2025-07-13 03:25:19,574 [wrapper] apfmon messages muted
[2025-07-12 23:25:19] 2025-07-13 03:25:19,577 [wrapper] ==== wrapper stdout END ====
[2025-07-12 23:25:19] 2025-07-13 03:25:19,579 [wrapper] ==== wrapper stderr END ====
[2025-07-12 23:25:19]  *** Error codes and diagnostics ***
[2025-07-12 23:25:19]     "exeErrorCode": 0,
[2025-07-12 23:25:19]     "exeErrorDiag": "",
[2025-07-12 23:25:19]     "pilotErrorCode": 0,
[2025-07-12 23:25:19]     "pilotErrorDiag": "",
[2025-07-12 23:25:19]  *** Listing of results directory ***
[2025-07-12 23:25:19] total 580384
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas    530466 Jul  6 16:09 pilot3.tar.gz
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas      5112 Jul  6 16:39 queuedata.json
[2025-07-12 23:25:19] -rwx------ 1 boincer umatlas     36292 Jul  6 16:39 runpilot2-wrapper.sh
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas       100 Jul 12 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-12 23:25:19] -rwxr-xr-x 1 boincer umatlas      7986 Jul 12 22:11 run_atlas
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas       105 Jul 12 22:11 job.xml
[2025-07-12 23:25:19] -rw-r--r-- 2 boincer umatlas 323474477 Jul 12 22:11 EVNT.45482146._000496.pool.root.1
[2025-07-12 23:25:19] -rw-r--r-- 2 boincer umatlas     15095 Jul 12 22:11 start_atlas.sh
[2025-07-12 23:25:19] drwxrwx--x 2 boincer umatlas      4096 Jul 12 22:11 shared
[2025-07-12 23:25:19] -rw-r--r-- 2 boincer umatlas    542916 Jul 12 22:11 input.tar.gz
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas         0 Jul 12 22:11 boinc_lockfile
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas      2617 Jul 12 22:11 pandaJob.out
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas    976558 Jul 12 22:11 agis_schedconf.cvmfs.json
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas   1588641 Jul 12 22:11 agis_ddmendpoints.agis.ALL.json
[2025-07-12 23:25:19] drwx------ 4 boincer umatlas      4096 Jul 12 22:11 pilot3
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas      6384 Jul 12 23:22 init_data.xml
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas 265461448 Jul 12 23:24 HITS.45482148._012427.pool.root.1
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas        95 Jul 12 23:24 pilot_heartbeat.json
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas       529 Jul 12 23:24 boinc_task_state.xml
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas      1043 Jul 12 23:24 memory_monitor_summary.json
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas    313987 Jul 12 23:24 log.45482148._012427.job.log.tgz.1
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas      7837 Jul 12 23:24 heartbeat.json
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas        27 Jul 12 23:24 wrapper_checkpoint.txt
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas      8192 Jul 12 23:24 boinc_mmap_file
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas       822 Jul 12 23:25 pilotlog.txt
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas    439942 Jul 12 23:25 log.45482148._012427.job.log.1
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas       357 Jul 12 23:25 output.list
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas       620 Jul 12 23:25 runtime_log
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas    778240 Jul 12 23:25 result.tar.gz
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas      8670 Jul 12 23:25 runtime_log.err
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas       659 Jul 12 23:25 bj6MDmJKls7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnFrKDmzDctmn.diag
[2025-07-12 23:25:19] -rw-r--r-- 1 boincer umatlas     21529 Jul 12 23:25 stderr.txt
[2025-07-12 23:25:19] HITS file was successfully produced:
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas 265461448 Jul 12 23:24 shared/HITS.pool.root.1
[2025-07-12 23:25:19]  *** Contents of shared directory: ***
[2025-07-12 23:25:19] total 576448
[2025-07-12 23:25:19] -rw-r--r-- 2 boincer umatlas 323474477 Jul 12 22:11 ATLAS.root_0
[2025-07-12 23:25:19] -rw-r--r-- 2 boincer umatlas     15095 Jul 12 22:11 start_atlas.sh
[2025-07-12 23:25:19] -rw-r--r-- 2 boincer umatlas    542916 Jul 12 22:11 input.tar.gz
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas 265461448 Jul 12 23:24 HITS.pool.root.1
[2025-07-12 23:25:19] -rw------- 1 boincer umatlas    778240 Jul 12 23:25 result.tar.gz
23:25:21 (250809): run_atlas exited; CPU time 32460.055555
23:25:21 (250809): called boinc_finish(0)

</stderr_txt>
]]>

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