Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:36:50 (601940): wrapper (7.7.26015): starting
14:36:50 (601940): wrapper: running run_atlas (--nthreads 8)
[2025-07-11 14:36:50] Arguments: --nthreads 8
[2025-07-11 14:36:50] Threads: 8
[2025-07-11 14:36:50] Checking for CVMFS
[2025-07-11 14:36:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 14:36:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 14:36:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 14:36:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 14:36:51] 2.13.0.0 79137 1351 109052 148215 3 325 33096673 40960001 26364 16776704 0 4480191 99.279 12008153 36998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-11 14:36:51] CVMFS is ok
[2025-07-11 14:36:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 14:36:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 14:36:51] Further information can be found at the LHC@home message board.
[2025-07-11 14:36:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 14:36:51] Checking for apptainer binary...
[2025-07-11 14:36:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-11 14:36:51] Running /usr/bin/apptainer --version
[2025-07-11 14:36:51] apptainer version 1.4.1-1.el9
[2025-07-11 14:36:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 14:36:52] c8-7-6.aglt2.org
[2025-07-11 14:36:52] apptainer works
[2025-07-11 14:36:52] Set ATHENA_PROC_NUMBER=8
[2025-07-11 14:36:52] Set ATHENA_CORE_NUMBER=8
[2025-07-11 14:36:52] Starting ATLAS job with PandaID=6722823375
[2025-07-11 14:36:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 16:14:32]  *** The last 200 lines of the pilot log: ***
[2025-07-11 16:14:32] 2025-07-11 20:13:42,756 | INFO     | total size of present files: 0 B (workdir size: 4288390 B)
[2025-07-11 16:14:32] 2025-07-11 20:13:42,756 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6722823375/HITS.45482062._016875.pool.root.1 since it does not exist
[2025-07-11 16:14:32] 2025-07-11 20:13:42,756 | INFO     | transferring file log.45482062._016875.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6722823375/log.45482062._016875.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-11 16:14:32] 2025-07-11 20:13:42,757 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6722823375/log.45482062._016875.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482062._016875.job
[2025-07-11 16:14:32] 2025-07-11 20:13:42,884 | INFO     | adding to output.list: log.45482062._016875.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/d1/log.45482062._016875.job.log.tg
[2025-07-11 16:14:32] 2025-07-11 20:13:42,885 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-11 16:14:32] 2025-07-11 20:13:42,885 | INFO     | summary of transferred files:
[2025-07-11 16:14:32] 2025-07-11 20:13:42,885 | INFO     |  -- lfn=log.45482062._016875.job.log.tgz.1, status_code=0, status=transferred
[2025-07-11 16:14:32] 2025-07-11 20:13:42,886 | INFO     | stage-out finished correctly
[2025-07-11 16:14:32] 2025-07-11 20:13:43,257 | INFO     | number of running child processes to parent process 613087: 1
[2025-07-11 16:14:32] 2025-07-11 20:13:43,257 | INFO     | maximum number of monitored processes: 6
[2025-07-11 16:14:32] 2025-07-11 20:13:45,762 | INFO     | monitor loop #394: job 0:6722823375 is in state 'finished'
[2025-07-11 16:14:32] 2025-07-11 20:13:45,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 16:14:32] 2025-07-11 20:13:46,384 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-11 16:14:32] 2025-07-11 20:13:48,266 | INFO     | monitor loop #395: job 0:6722823375 is in state 'finished'
[2025-07-11 16:14:32] 2025-07-11 20:13:48,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 16:14:32] 2025-07-11 20:13:48,716 | INFO     | job 6722823375 has state=finished
[2025-07-11 16:14:32] 2025-07-11 20:13:48,716 | INFO     | preparing for final server update for job 6722823375 in state='finished'
[2025-07-11 16:14:32] 2025-07-11 20:13:48,717 | INFO     | this job has now completed (state=finished)
[2025-07-11 16:14:32] 2025-07-11 20:13:48,717 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-11 16:14:32] 2025-07-11 20:13:48,717 | INFO     | log transfer has been attempted: DONE
[2025-07-11 16:14:32] 2025-07-11 20:13:48,717 | INFO     | job 6722823375 has finished - writing final server update
[2025-07-11 16:14:32] 2025-07-11 20:13:48,717 | INFO     | total number of processed events: 400 (read)
[2025-07-11 16:14:32] 2025-07-11 20:13:48,725 | INFO     | executing command: lscpu
[2025-07-11 16:14:32] 2025-07-11 20:13:48,812 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-11 16:14:32] 2025-07-11 20:13:50,771 | INFO     | monitor loop #396: job 0:6722823375 is in state 'finished'
[2025-07-11 16:14:32] 2025-07-11 20:13:50,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 16:14:32] 2025-07-11 20:13:53,276 | INFO     | monitor loop #397: job 0:6722823375 is in state 'finished'
[2025-07-11 16:14:32] 2025-07-11 20:13:53,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 16:14:32] 2025-07-11 20:13:53,583 | INFO     | PID=605645 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-11 16:14:32] 2025-07-11 20:13:53,584 | INFO     | .. there are 23 such processes running
[2025-07-11 16:14:32] 2025-07-11 20:13:55,794 | INFO     | monitor loop #398: job 0:6722823375 is in state 'finished'
[2025-07-11 16:14:32] 2025-07-11 20:13:55,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 16:14:32] 2025-07-11 20:13:58,307 | INFO     | monitor loop #399: job 0:6722823375 is in state 'finished'
[2025-07-11 16:14:32] 2025-07-11 20:13:58,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 16:14:32] 2025-07-11 20:13:58,436 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-11 16:14:32] 2025-07-11 20:13:58,441 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3720.597249999999
[2025-07-11 16:14:32] 2025-07-11 20:13:58,463 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6722823375/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 16:14:32] 2025-07-11 20:13:58,464 | INFO     | extracted standard info from prmon json
[2025-07-11 16:14:32] 2025-07-11 20:13:58,464 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 16:14:32] 2025-07-11 20:13:58,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 16:14:32] 2025-07-11 20:13:58,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 16:14:32] 2025-07-11 20:13:58,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 16:14:32] 2025-07-11 20:13:58,466 | INFO     | fitting pss+swap vs Time
[2025-07-11 16:14:32] 2025-07-11 20:13:58,466 | INFO     | sum of square deviations: 204163828.0
[2025-07-11 16:14:32] 2025-07-11 20:13:58,466 | INFO     | sum of deviations: -20516477028.999996
[2025-07-11 16:14:32] 2025-07-11 20:13:58,466 | INFO     | mean x: 1752262033.0
[2025-07-11 16:14:32] 2025-07-11 20:13:58,466 | INFO     | mean y: 2744042.16091954
[2025-07-11 16:14:32] 2025-07-11 20:13:58,466 | INFO     | -- intersect: 176088018799.2219
[2025-07-11 16:14:32] 2025-07-11 20:13:58,466 | INFO     | intersect: 176088018799.2219
[2025-07-11 16:14:32] 2025-07-11 20:13:58,466 | INFO     | chi2: 0.15547004723544205
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | -- intersect: 176088018799.2219
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | current memory leak: -100.49 B/s (using 87 data points, chi2=0.16)
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | could have reported an average CPU frequency of 3680 MHz (7 samples)
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | ..............................
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | . Timing measurements:
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | . get job = 0 s
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | . initial setup = 2 s
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | . payload setup = 20 s
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | . stage-in = 0 s
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | . payload execution = 5722 s
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | . stage-out = 1 s
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | . log creation = 0 s
[2025-07-11 16:14:32] 2025-07-11 20:13:58,467 | INFO     | ..............................
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | 
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | job summary report
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | --------------------------------------------------
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | PanDA job id: 6722823375
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | task id: 45482062
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | errors: (none)
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | pilot state: finished 
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | transexitcode: 0
[2025-07-11 16:14:32] 2025-07-11 20:13:58,547 | INFO     | exeerrorcode: 0
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | exeerrordiag: 
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | exitcode: 0
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | exitmsg: OK
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | cpuconsumptiontime: 36063 s
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | nevents: 400
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | neventsw: 0
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | pid: 613087
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | pgrp: 613087
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | corecount: 8
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | event service: False
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | sizes: {0: 2393439, 11: 2393439, 14: 2393729, 22: 2393757, 5746: 2420475, 5748: 2429501, 5752: 2429685, 5764: 2429879}
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | --------------------------------------------------
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | 
[2025-07-11 16:14:32] 2025-07-11 20:13:58,548 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-11 16:14:32] 2025-07-11 20:13:58,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | job 6722823375 has completed (purged errors)
[2025-07-11 16:14:32] 2025-07-11 20:13:58,648 | INFO     | overall cleanup function is called
[2025-07-11 16:14:32] 2025-07-11 20:13:59,656 | INFO     | --- collectZombieJob: --- 10, [613087]
[2025-07-11 16:14:32] 2025-07-11 20:13:59,656 | INFO     | zombie collector waiting for pid 613087
[2025-07-11 16:14:32] 2025-07-11 20:13:59,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 16:14:32] 2025-07-11 20:13:59,656 | INFO     | collected zombie processes
[2025-07-11 16:14:32] 2025-07-11 20:13:59,656 | INFO     | will attempt to kill all subprocesses of pid=613087
[2025-07-11 16:14:32] 2025-07-11 20:14:00,055 | INFO     | process IDs to be killed: [613087] (in reverse order)
[2025-07-11 16:14:32] 2025-07-11 20:14:00,258 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 16:14:32] 2025-07-11 20:14:00,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 16:14:32] 2025-07-11 20:14:00,281 | INFO     | did not find any defunct processes belonging to 613087
[2025-07-11 16:14:32] 2025-07-11 20:14:00,303 | INFO     | did not find any defunct processes belonging to 613087
[2025-07-11 16:14:32] 2025-07-11 20:14:00,303 | INFO     | ready for new job
[2025-07-11 16:14:32] 2025-07-11 20:14:00,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 16:14:32] 2025-07-11 20:14:00,305 | INFO     | ***************************************
[2025-07-11 16:14:32] 2025-07-11 20:14:00,305 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 16:14:32] 2025-07-11 20:14:00,305 | INFO     | ***************************************
[2025-07-11 16:14:32] 2025-07-11 20:14:00,305 | INFO     | 
[2025-07-11 16:14:32] 2025-07-11 20:14:00,322 | INFO     | architecture information:
[2025-07-11 16:14:32] 2025-07-11 20:14:00,323 | INFO     | executing command: cat /etc/os-release
[2025-07-11 16:14:32] 2025-07-11 20:14:00,340 | INFO     | cat /etc/os-release:
[2025-07-11 16:14:32] NAME="CentOS Linux"
[2025-07-11 16:14:32] VERSION="7 (Core)"
[2025-07-11 16:14:32] ID="centos"
[2025-07-11 16:14:32] ID_LIKE="rhel fedora"
[2025-07-11 16:14:32] VERSION_ID="7"
[2025-07-11 16:14:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 16:14:32] ANSI_COLOR="0;31"
[2025-07-11 16:14:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 16:14:32] HOME_URL="https://www.centos.org/"
[2025-07-11 16:14:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 16:14:32] 
[2025-07-11 16:14:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 16:14:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 16:14:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 16:14:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 16:14:32] 
[2025-07-11 16:14:32] 2025-07-11 20:14:00,340 | INFO     | ***************************************
[2025-07-11 16:14:32] 2025-07-11 20:14:00,843 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-11 16:14:32] 2025-07-11 20:14:00,859 | INFO     | sufficient remaining disk space (173458587648 B)
[2025-07-11 16:14:32] 2025-07-11 20:14:00,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 16:14:32] 2025-07-11 20:14:00,860 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 16:14:32] 2025-07-11 20:14:00,860 | INFO     | update_server=False
[2025-07-11 16:14:32] 2025-07-11 20:14:00,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 16:14:32] 2025-07-11 20:14:00,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 16:14:32] 2025-07-11 20:14:01,159 | INFO     | all data control threads have been joined
[2025-07-11 16:14:32] 2025-07-11 20:14:01,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 16:14:32] 2025-07-11 20:14:01,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 16:14:32] 2025-07-11 20:14:01,820 | INFO     | aborting loop
[2025-07-11 16:14:32] 2025-07-11 20:14:01,865 | INFO     | [job] retrieve thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:01,896 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:02,105 | INFO     | all payload control threads have been joined
[2025-07-11 16:14:32] 2025-07-11 20:14:02,164 | INFO     | [data] control thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:02,437 | INFO     | all job control threads have been joined
[2025-07-11 16:14:32] 2025-07-11 20:14:02,464 | INFO     | [payload] failed_post thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:02,574 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:02,653 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:02,657 | INFO     | [data] copytool_in thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:02,668 | INFO     | [job] validate thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:02,826 | INFO     | [job] job monitor thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:02,988 | INFO     | [payload] validate_post thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:03,001 | INFO     | [data] copytool_out thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:03,111 | INFO     | [payload] control thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:03,443 | INFO     | [job] control thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:03,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 16:14:32] 2025-07-11 20:14:04,567 | INFO     | [job] queue monitor thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:05,476 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:11,290 | INFO     | job.realtimelogging is not enabled
[2025-07-11 16:14:32] 2025-07-11 20:14:12,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 16:14:32] 2025-07-11 20:14:13,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287240689472)>', '<ExcThread(monitor, started 140286441285376)>']
[2025-07-11 16:14:32] 2025-07-11 20:14:18,464 | INFO     | all workflow threads have been joined
[2025-07-11 16:14:32] 2025-07-11 20:14:18,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 16:14:32] 2025-07-11 20:14:18,464 | INFO     | traces error code: 0
[2025-07-11 16:14:32] 2025-07-11 20:14:18,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 16:14:32] 2025-07-11 20:14:32,122 | INFO     | PID=605645 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-11 16:14:32] 2025-07-11 20:14:32,122 | INFO     | .. there are 23 such processes running
[2025-07-11 16:14:32] 2025-07-11 20:14:32,122 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 16:14:32] 2025-07-11 20:14:32,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 16:14:32] 2025-07-11 20:14:32,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 16:14:32] 2025-07-11 20:14:32,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 16:14:32] 2025-07-11 20:14:32,123 | CRITICAL | thread 'MainThread' is not alive
[2025-07-11 16:14:32] 2025-07-11 20:14:32,123 | INFO     | [monitor] control thread has ended
[2025-07-11 16:14:32] 2025-07-11 20:14:32,472 [wrapper] ==== pilot stdout END ====
[2025-07-11 16:14:32] 2025-07-11 20:14:32,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 16:14:32] 2025-07-11 20:14:32,479 [wrapper] pilotpid: 605645
[2025-07-11 16:14:32] 2025-07-11 20:14:32,482 [wrapper] Pilot exit status: 0
[2025-07-11 16:14:32] 2025-07-11 20:14:32,535 [wrapper] pandaids: 6722823375
[2025-07-11 16:14:32] 2025-07-11 20:14:32,644 [wrapper] cleanup supervisor_pilot  859174 605646
[2025-07-11 16:14:32] 2025-07-11 20:14:32,648 [wrapper] Test setup, not cleaning
[2025-07-11 16:14:32] 2025-07-11 20:14:32,652 [wrapper] apfmon messages muted
[2025-07-11 16:14:32] 2025-07-11 20:14:32,655 [wrapper] ==== wrapper stdout END ====
[2025-07-11 16:14:32] 2025-07-11 20:14:32,658 [wrapper] ==== wrapper stderr END ====
[2025-07-11 16:14:32]  *** Error codes and diagnostics ***
[2025-07-11 16:14:32]     "exeErrorCode": 0,
[2025-07-11 16:14:32]     "exeErrorDiag": "",
[2025-07-11 16:14:32]     "pilotErrorCode": 0,
[2025-07-11 16:14:32]     "pilotErrorDiag": "",
[2025-07-11 16:14:32]  *** Listing of results directory ***
[2025-07-11 16:14:32] total 573232
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas    530466 Jul  7 06:18 pilot3.tar.gz
[2025-07-11 16:14:32] -rwx------. 1 boincer umatlas     36292 Jul  7 06:26 runpilot2-wrapper.sh
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas      5112 Jul  7 06:26 queuedata.json
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas       100 Jul 11 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 16:14:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 11 14:36 run_atlas
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas       105 Jul 11 14:36 job.xml
[2025-07-11 16:14:32] -rw-r--r--. 2 boincer umatlas 320222182 Jul 11 14:36 EVNT.45482060._000213.pool.root.1
[2025-07-11 16:14:32] -rw-r--r--. 2 boincer umatlas    542887 Jul 11 14:36 input.tar.gz
[2025-07-11 16:14:32] -rw-r--r--. 2 boincer umatlas     15095 Jul 11 14:36 start_atlas.sh
[2025-07-11 16:14:32] drwxrwx--x. 2 boincer umatlas      4096 Jul 11 14:36 shared
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas         0 Jul 11 14:36 boinc_lockfile
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas      2532 Jul 11 14:36 pandaJob.out
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas    976223 Jul 11 14:37 agis_schedconf.cvmfs.json
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas   1588641 Jul 11 14:37 agis_ddmendpoints.agis.ALL.json
[2025-07-11 16:14:32] drwx------. 4 boincer umatlas      4096 Jul 11 14:37 pilot3
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas 261172996 Jul 11 16:13 HITS.45482062._016875.pool.root.1
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas       530 Jul 11 16:13 boinc_task_state.xml
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas      7161 Jul 11 16:13 init_data.xml
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas      1041 Jul 11 16:13 memory_monitor_summary.json
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas    324734 Jul 11 16:13 log.45482062._016875.job.log.tgz.1
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas        95 Jul 11 16:13 pilot_heartbeat.json
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas      7795 Jul 11 16:13 heartbeat.json
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas       892 Jul 11 16:14 pilotlog.txt
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas        27 Jul 11 16:14 wrapper_checkpoint.txt
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas      8192 Jul 11 16:14 boinc_mmap_file
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas    538641 Jul 11 16:14 log.45482062._016875.job.log.1
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas       357 Jul 11 16:14 output.list
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas       620 Jul 11 16:14 runtime_log
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas    880640 Jul 11 16:14 result.tar.gz
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas      8650 Jul 11 16:14 runtime_log.err
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas       656 Jul 11 16:14 8zULDmTEys7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUPsKDmmvlDwm.diag
[2025-07-11 16:14:32] -rw-r--r--. 1 boincer umatlas     22609 Jul 11 16:14 stderr.txt
[2025-07-11 16:14:32] HITS file was successfully produced:
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas 261172996 Jul 11 16:13 shared/HITS.pool.root.1
[2025-07-11 16:14:32]  *** Contents of shared directory: ***
[2025-07-11 16:14:32] total 569188
[2025-07-11 16:14:32] -rw-r--r--. 2 boincer umatlas 320222182 Jul 11 14:36 ATLAS.root_0
[2025-07-11 16:14:32] -rw-r--r--. 2 boincer umatlas    542887 Jul 11 14:36 input.tar.gz
[2025-07-11 16:14:32] -rw-r--r--. 2 boincer umatlas     15095 Jul 11 14:36 start_atlas.sh
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas 261172996 Jul 11 16:13 HITS.pool.root.1
[2025-07-11 16:14:32] -rw-------. 1 boincer umatlas    880640 Jul 11 16:14 result.tar.gz
16:14:34 (601940): run_atlas exited; CPU time 36178.017832
16:14:34 (601940): called boinc_finish(0)

</stderr_txt>
]]>

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