Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:25:53 (230124): wrapper (7.7.26015): starting
04:25:53 (230124): wrapper: running run_atlas (--nthreads 4)
[2025-07-12 04:25:53] Arguments: --nthreads 4
[2025-07-12 04:25:53] Threads: 4
[2025-07-12 04:25:53] Checking for CVMFS
[2025-07-12 04:25:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-12 04:25:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-12 04:25:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-12 04:25:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-12 04:25:54] 2.13.1.0 3130124 2083 48756 148226 0 56 2501931 4194305 2754 130560 0 3327485 99.995 80550 68 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-12 04:25:54] CVMFS is ok
[2025-07-12 04:25:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-12 04:25:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-12 04:25:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-12 04:25:54] Further information can be found at the LHC@home message board.
[2025-07-12 04:25:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-12 04:25:54] Checking for apptainer binary...
[2025-07-12 04:25:54] apptainer is not installed, using version from CVMFS
[2025-07-12 04:25:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-12 04:25:55] Ryze
[2025-07-12 04:25:55] apptainer works
[2025-07-12 04:25:55] Set ATHENA_PROC_NUMBER=4
[2025-07-12 04:25:55] Set ATHENA_CORE_NUMBER=4
[2025-07-12 04:25:55] Starting ATLAS job with PandaID=6720709668
[2025-07-12 04:25:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-12 07:04:25]  *** The last 200 lines of the pilot log: ***
[2025-07-12 07:04:25] 2025-07-12 05:03:50,762 | INFO     | PID=233853 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-12 07:04:25] 2025-07-12 05:03:50,762 | INFO     | .. there are 4 such processes running
[2025-07-12 07:04:25] 2025-07-12 05:03:51,455 | INFO     | monitor loop #720: job 0:6720709668 is in state 'finished'
[2025-07-12 07:04:25] 2025-07-12 05:03:51,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,259 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-12 07:04:25] 2025-07-12 05:03:52,262 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3496.493916666667
[2025-07-12 07:04:25] 2025-07-12 05:03:52,266 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6720709668/memory_monitor_summary.json (trf name=prmon)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,267 | INFO     | extracted standard info from prmon json
[2025-07-12 07:04:25] 2025-07-12 05:03:52,267 | INFO     | extracted standard memory fields from prmon json
[2025-07-12 07:04:25] 2025-07-12 05:03:52,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-12 07:04:25] 2025-07-12 05:03:52,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-12 07:04:25] 2025-07-12 05:03:52,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-12 07:04:25] 2025-07-12 05:03:52,269 | INFO     | fitting pss+swap vs Time
[2025-07-12 07:04:25] 2025-07-12 05:03:52,269 | INFO     | sum of square deviations: 1154663510.0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,270 | INFO     | sum of deviations: -12298543365.0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,270 | INFO     | mean x: 1752291882.0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,270 | INFO     | mean y: 2394127.0387096773
[2025-07-12 07:04:25] 2025-07-12 05:03:52,270 | INFO     | -- intersect: 18666392350.135296
[2025-07-12 07:04:25] 2025-07-12 05:03:52,270 | INFO     | intersect: 18666392350.135296
[2025-07-12 07:04:25] 2025-07-12 05:03:52,271 | INFO     | chi2: 1.554342738101561
[2025-07-12 07:04:25] 2025-07-12 05:03:52,271 | INFO     | sum of square deviations: 1046484737.5
[2025-07-12 07:04:25] 2025-07-12 05:03:52,271 | INFO     | sum of deviations: -12198367761.999996
[2025-07-12 07:04:25] 2025-07-12 05:03:52,272 | INFO     | mean x: 1752291729.5
[2025-07-12 07:04:25] 2025-07-12 05:03:52,272 | INFO     | mean y: 2394286.2933333335
[2025-07-12 07:04:25] 2025-07-12 05:03:52,272 | INFO     | -- intersect: 20428013673.553646
[2025-07-12 07:04:25] 2025-07-12 05:03:52,272 | INFO     | intersect: 20428013673.553646
[2025-07-12 07:04:25] 2025-07-12 05:03:52,272 | INFO     | chi2: 1.5470570939112234
[2025-07-12 07:04:25] 2025-07-12 05:03:52,272 | INFO     | current chi2=1.5470570939112234 (change=0.46872829342878686 %)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,272 | INFO     | right removable region: 149
[2025-07-12 07:04:25] 2025-07-12 05:03:52,272 | INFO     | sum of square deviations: 1046484737.5
[2025-07-12 07:04:25] 2025-07-12 05:03:52,273 | INFO     | sum of deviations: -27183581920.5
[2025-07-12 07:04:25] 2025-07-12 05:03:52,273 | INFO     | mean x: 1752292034.5
[2025-07-12 07:04:25] 2025-07-12 05:03:52,273 | INFO     | mean y: 2414555.473333333
[2025-07-12 07:04:25] 2025-07-12 05:03:52,273 | INFO     | -- intersect: 45520110477.40776
[2025-07-12 07:04:25] 2025-07-12 05:03:52,273 | INFO     | intersect: 45520110477.40776
[2025-07-12 07:04:25] 2025-07-12 05:03:52,273 | INFO     | chi2: 0.2876443381704437
[2025-07-12 07:04:25] 2025-07-12 05:03:52,273 | INFO     | current chi2=0.2876443381704437 (change=81.49414983456185 %)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,274 | INFO     | sum of square deviations: 945282840.0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,274 | INFO     | sum of deviations: -19890901899.0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,274 | INFO     | mean x: 1752292187.0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,274 | INFO     | mean y: 2403558.3655172414
[2025-07-12 07:04:25] 2025-07-12 05:03:52,274 | INFO     | -- intersect: 36874618428.99742
[2025-07-12 07:04:25] 2025-07-12 05:03:52,274 | INFO     | intersect: 36874618428.99742
[2025-07-12 07:04:25] 2025-07-12 05:03:52,275 | INFO     | chi2: 0.2526271796330144
[2025-07-12 07:04:25] 2025-07-12 05:03:52,275 | INFO     | current chi2=0.2526271796330144 (change=12.173769440467794 %)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,275 | INFO     | left removable region: 20
[2025-07-12 07:04:25] 2025-07-12 05:03:52,275 | INFO     | sum of square deviations: 665612480.0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | sum of deviations: -4720691362.999999
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | mean x: 1752292309.0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | mean y: 2377378.596899225
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | -- intersect: 12430075802.3819
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | intersect: 12430075802.3819
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | chi2: 0.10573261945212971
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | -- intersect: 12430075802.3819
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | current memory leak: -7.09 B/s (using 129 data points, chi2=0.11)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,276 | INFO     | could have reported an average CPU frequency of 3522 MHz (9 samples)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | ..............................
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | . Timing measurements:
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | . get job = 0 s
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | . initial setup = 1 s
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | . payload setup = 4 s
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | . stage-in = 0 s
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | . payload execution = 9422 s
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | . stage-out = 0 s
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | . log creation = 0 s
[2025-07-12 07:04:25] 2025-07-12 05:03:52,277 | INFO     | ..............................
[2025-07-12 07:04:25] 2025-07-12 05:03:52,463 | INFO     | 
[2025-07-12 07:04:25] 2025-07-12 05:03:52,463 | INFO     | job summary report
[2025-07-12 07:04:25] 2025-07-12 05:03:52,463 | INFO     | --------------------------------------------------
[2025-07-12 07:04:25] 2025-07-12 05:03:52,463 | INFO     | PanDA job id: 6720709668
[2025-07-12 07:04:25] 2025-07-12 05:03:52,463 | INFO     | task id: 45482137
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | errors: (none)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | pilot state: finished 
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | transexitcode: 0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | exeerrorcode: 0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | exeerrordiag: 
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | exitcode: 0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | exitmsg: OK
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | cpuconsumptiontime: 36848 s
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | nevents: 400
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | neventsw: 0
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | pid: 240485
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | pgrp: 240485
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | corecount: 4
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | event service: False
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | sizes: {0: 2393506, 3: 2393768, 11: 2393796, 9431: 2422345, 9433: 2431357, 9436: 2431413, 9455: 2431799}
[2025-07-12 07:04:25] 2025-07-12 05:03:52,464 | INFO     | --------------------------------------------------
[2025-07-12 07:04:25] 2025-07-12 05:03:52,465 | INFO     | 
[2025-07-12 07:04:25] 2025-07-12 05:03:52,465 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-07-12 07:04:25] 2025-07-12 05:03:52,496 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,496 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,498 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,498 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-12 07:04:25] 2025-07-12 05:03:52,498 | INFO     | job 6720709668 has completed (purged errors)
[2025-07-12 07:04:25] 2025-07-12 05:03:52,498 | INFO     | overall cleanup function is called
[2025-07-12 07:04:25] 2025-07-12 05:03:53,501 | INFO     | --- collectZombieJob: --- 10, [240485]
[2025-07-12 07:04:25] 2025-07-12 05:03:53,502 | INFO     | zombie collector waiting for pid 240485
[2025-07-12 07:04:25] 2025-07-12 05:03:53,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-12 07:04:25] 2025-07-12 05:03:53,502 | INFO     | collected zombie processes
[2025-07-12 07:04:25] 2025-07-12 05:03:53,502 | INFO     | will attempt to kill all subprocesses of pid=240485
[2025-07-12 07:04:25] 2025-07-12 05:03:53,632 | INFO     | process IDs to be killed: [240485] (in reverse order)
[2025-07-12 07:04:25] 2025-07-12 05:03:53,683 | WARNING  | found no corresponding commands to process id(s)
[2025-07-12 07:04:25] 2025-07-12 05:03:53,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-12 07:04:25] 2025-07-12 05:03:53,687 | INFO     | did not find any defunct processes belonging to 240485
[2025-07-12 07:04:25] 2025-07-12 05:03:53,691 | INFO     | did not find any defunct processes belonging to 240485
[2025-07-12 07:04:25] 2025-07-12 05:03:53,691 | INFO     | ready for new job
[2025-07-12 07:04:25] 2025-07-12 05:03:53,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-12 07:04:25] 2025-07-12 05:03:53,692 | INFO     | ***************************************
[2025-07-12 07:04:25] 2025-07-12 05:03:53,692 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-12 07:04:25] 2025-07-12 05:03:53,692 | INFO     | ***************************************
[2025-07-12 07:04:25] 2025-07-12 05:03:53,692 | INFO     | 
[2025-07-12 07:04:25] 2025-07-12 05:03:53,694 | INFO     | architecture information:
[2025-07-12 07:04:25] 2025-07-12 05:03:53,694 | INFO     | executing command: cat /etc/os-release
[2025-07-12 07:04:25] 2025-07-12 05:03:53,708 | INFO     | cat /etc/os-release:
[2025-07-12 07:04:25] NAME="CentOS Linux"
[2025-07-12 07:04:25] VERSION="7 (Core)"
[2025-07-12 07:04:25] ID="centos"
[2025-07-12 07:04:25] ID_LIKE="rhel fedora"
[2025-07-12 07:04:25] VERSION_ID="7"
[2025-07-12 07:04:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-12 07:04:25] ANSI_COLOR="0;31"
[2025-07-12 07:04:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-12 07:04:25] HOME_URL="https://www.centos.org/"
[2025-07-12 07:04:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-12 07:04:25] 
[2025-07-12 07:04:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-12 07:04:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-12 07:04:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-12 07:04:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-12 07:04:25] 
[2025-07-12 07:04:25] 2025-07-12 05:03:53,709 | INFO     | ***************************************
[2025-07-12 07:04:25] 2025-07-12 05:03:54,212 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-07-12 07:04:25] 2025-07-12 05:03:54,230 | INFO     | sufficient remaining disk space (3213459718144 B)
[2025-07-12 07:04:25] 2025-07-12 05:03:54,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-12 07:04:25] 2025-07-12 05:03:54,231 | INFO     | current server update state: UPDATING_FINAL
[2025-07-12 07:04:25] 2025-07-12 05:03:54,231 | INFO     | update_server=False
[2025-07-12 07:04:25] 2025-07-12 05:03:54,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-12 07:04:25] 2025-07-12 05:03:54,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-12 07:04:25] 2025-07-12 05:03:54,626 | INFO     | all job control threads have been joined
[2025-07-12 07:04:25] 2025-07-12 05:03:54,709 | INFO     | all payload control threads have been joined
[2025-07-12 07:04:25] 2025-07-12 05:03:54,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-12 07:04:25] 2025-07-12 05:03:54,962 | INFO     | aborting loop
[2025-07-12 07:04:25] 2025-07-12 05:03:55,112 | INFO     | all data control threads have been joined
[2025-07-12 07:04:25] 2025-07-12 05:03:55,235 | INFO     | [job] retrieve thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,236 | INFO     | [job] queue monitor thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,269 | INFO     | [payload] validate_pre thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,316 | INFO     | [data] copytool_in thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,632 | INFO     | [job] control thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-12 07:04:25] 2025-07-12 05:03:55,700 | INFO     | [payload] failed_post thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,714 | INFO     | [payload] control thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,967 | INFO     | [job] job monitor thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:55,978 | INFO     | [payload] execute_payloads thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:56,113 | INFO     | [data] control thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:56,391 | INFO     | [payload] validate_post thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:56,466 | INFO     | [job] validate thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:56,660 | INFO     | [job] create_data_payload thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:03:57,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-12 07:04:25] 2025-07-12 05:03:57,645 | INFO     | [data] copytool_out thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:04:01,309 | INFO     | [data] queue_monitor thread has finished
[2025-07-12 07:04:25] 2025-07-12 05:04:02,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133631504295744)>', '<ExcThread(monitor, started 133630961628928)>']
[2025-07-12 07:04:25] 2025-07-12 05:04:07,920 | INFO     | all workflow threads have been joined
[2025-07-12 07:04:25] 2025-07-12 05:04:07,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-12 07:04:25] 2025-07-12 05:04:07,921 | INFO     | traces error code: 0
[2025-07-12 07:04:25] 2025-07-12 05:04:07,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-12 07:04:25] 2025-07-12 05:04:24,981 | INFO     | PID=233853 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-12 07:04:25] 2025-07-12 05:04:24,982 | INFO     | .. there are 4 such processes running
[2025-07-12 07:04:25] 2025-07-12 05:04:24,982 | INFO     | found 0 job(s) in 20 queues
[2025-07-12 07:04:25] 2025-07-12 05:04:24,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-12 07:04:25] 2025-07-12 05:04:24,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-12 07:04:25] 2025-07-12 05:04:24,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-12 07:04:25] 2025-07-12 05:04:24,982 | INFO     | [monitor] control thread has ended
[2025-07-12 07:04:25] 2025-07-12 05:04:25,079 [wrapper] ==== pilot stdout END ====
[2025-07-12 07:04:25] 2025-07-12 05:04:25,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-12 07:04:25] 2025-07-12 05:04:25,085 [wrapper] pilotpid: 233853
[2025-07-12 07:04:25] 2025-07-12 05:04:25,089 [wrapper] Pilot exit status: 0
[2025-07-12 07:04:25] 2025-07-12 05:04:25,098 [wrapper] pandaids: 6720709668
[2025-07-12 07:04:25] 2025-07-12 05:04:25,139 [wrapper] cleanup supervisor_pilot  353720 233854
[2025-07-12 07:04:25] 2025-07-12 05:04:25,142 [wrapper] Test setup, not cleaning
[2025-07-12 07:04:25] 2025-07-12 05:04:25,144 [wrapper] apfmon messages muted
[2025-07-12 07:04:25] 2025-07-12 05:04:25,146 [wrapper] ==== wrapper stdout END ====
[2025-07-12 07:04:25] 2025-07-12 05:04:25,147 [wrapper] ==== wrapper stderr END ====
[2025-07-12 07:04:25]  *** Error codes and diagnostics ***
[2025-07-12 07:04:25]     "exeErrorCode": 0,
[2025-07-12 07:04:25]     "exeErrorDiag": "",
[2025-07-12 07:04:25]     "pilotErrorCode": 0,
[2025-07-12 07:04:25]     "pilotErrorDiag": "",
[2025-07-12 07:04:25]  *** Listing of results directory ***
[2025-07-12 07:04:25] insgesamt 572796
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc      5112 Jul  6 03:41 queuedata.json
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc    530466 Jul  6 03:41 pilot3.tar.gz
[2025-07-12 07:04:25] -rwx------ 1 boinc boinc     36292 Jul  6 03:42 runpilot2-wrapper.sh
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc       100 Jul 12 04:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-12 07:04:25] -rwxr-xr-x 1 boinc boinc      7986 Jul 12 04:25 run_atlas
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc       105 Jul 12 04:25 job.xml
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc      9255 Jul 12 04:25 init_data.xml
[2025-07-12 07:04:25] -rw-r--r-- 2 boinc boinc 312661610 Jul 12 04:25 EVNT.45482135._000202.pool.root.1
[2025-07-12 07:04:25] -rw-r--r-- 2 boinc boinc     15095 Jul 12 04:25 start_atlas.sh
[2025-07-12 07:04:25] drwxrwx--x 2 boinc boinc      4096 Jul 12 04:25 shared
[2025-07-12 07:04:25] -rw-r--r-- 2 boinc boinc    542882 Jul 12 04:25 input.tar.gz
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc         0 Jul 12 04:25 boinc_lockfile
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc      2542 Jul 12 04:25 pandaJob.out
[2025-07-12 07:04:25] -rw------- 1 boinc boinc    976223 Jul 12 04:26 agis_schedconf.cvmfs.json
[2025-07-12 07:04:25] -rw------- 1 boinc boinc   1588641 Jul 12 04:26 agis_ddmendpoints.agis.ALL.json
[2025-07-12 07:04:25] drwx------ 4 boinc boinc      4096 Jul 12 04:26 pilot3
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc       530 Jul 12 07:02 boinc_task_state.xml
[2025-07-12 07:04:25] -rw------- 1 boinc boinc 267622688 Jul 12 07:02 HITS.45482137._005031.pool.root.1
[2025-07-12 07:04:25] -rw------- 1 boinc boinc      1017 Jul 12 07:03 memory_monitor_summary.json
[2025-07-12 07:04:25] -rw------- 1 boinc boinc    279441 Jul 12 07:03 log.45482137._005031.job.log.tgz.1
[2025-07-12 07:04:25] -rw------- 1 boinc boinc        95 Jul 12 07:03 pilot_heartbeat.json
[2025-07-12 07:04:25] -rw------- 1 boinc boinc      7720 Jul 12 07:03 heartbeat.json
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc      8192 Jul 12 07:04 boinc_mmap_file
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc        27 Jul 12 07:04 wrapper_checkpoint.txt
[2025-07-12 07:04:25] -rw------- 1 boinc boinc       821 Jul 12 07:04 pilotlog.txt
[2025-07-12 07:04:25] -rw------- 1 boinc boinc    914176 Jul 12 07:04 log.45482137._005031.job.log.1
[2025-07-12 07:04:25] -rw------- 1 boinc boinc       357 Jul 12 07:04 output.list
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc       620 Jul 12 07:04 runtime_log
[2025-07-12 07:04:25] -rw------- 1 boinc boinc   1208320 Jul 12 07:04 result.tar.gz
[2025-07-12 07:04:25] -rw------- 1 boinc boinc       636 Jul 12 07:04 zEOMDm9ZTs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUjBLDmclfpEo.diag
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc      8688 Jul 12 07:04 runtime_log.err
[2025-07-12 07:04:25] -rw-r--r-- 1 boinc boinc     21296 Jul 12 07:04 stderr.txt
[2025-07-12 07:04:25] HITS file was successfully produced:
[2025-07-12 07:04:25] -rw------- 1 boinc boinc 267622688 Jul 12 07:02 shared/HITS.pool.root.1
[2025-07-12 07:04:25]  *** Contents of shared directory: ***
[2025-07-12 07:04:25] insgesamt 568424
[2025-07-12 07:04:25] -rw-r--r-- 2 boinc boinc 312661610 Jul 12 04:25 ATLAS.root_0
[2025-07-12 07:04:25] -rw-r--r-- 2 boinc boinc     15095 Jul 12 04:25 start_atlas.sh
[2025-07-12 07:04:25] -rw-r--r-- 2 boinc boinc    542882 Jul 12 04:25 input.tar.gz
[2025-07-12 07:04:25] -rw------- 1 boinc boinc 267622688 Jul 12 07:02 HITS.pool.root.1
[2025-07-12 07:04:25] -rw------- 1 boinc boinc   1208320 Jul 12 07:04 result.tar.gz
07:04:26 (230124): run_atlas exited; CPU time 36935.423513
07:04:26 (230124): called boinc_finish(0)

</stderr_txt>
]]>

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