Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:58:42 (20172): wrapper (7.7.26015): starting
12:58:42 (20172): wrapper: running run_atlas (--nthreads 8)
[2025-07-11 12:58:42] Arguments: --nthreads 8
[2025-07-11 12:58:42] Threads: 8
[2025-07-11 12:58:42] Checking for CVMFS
[2025-07-11 12:58:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 12:58:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 12:58:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 12:58:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 12:58:43] 2.11.2.0 2777 89232 120216 148207 3 1 11476772 20275200 1 130560 0 24366461 99.947 9853472 10444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-11 12:58:43] CVMFS is ok
[2025-07-11 12:58:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 12:58:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 12:58:43] Further information can be found at the LHC@home message board.
[2025-07-11 12:58:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 12:58:43] Checking for apptainer binary...
[2025-07-11 12:58:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-11 12:58:43] Running /usr/bin/apptainer --version
[2025-07-11 12:58:43] apptainer version 1.3.2-1.el7
[2025-07-11 12:58:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 12:58:45] c-204-9.aglt2.org
[2025-07-11 12:58:45] apptainer works
[2025-07-11 12:58:45] Set ATHENA_PROC_NUMBER=8
[2025-07-11 12:58:45] Set ATHENA_CORE_NUMBER=8
[2025-07-11 12:58:45] Starting ATLAS job with PandaID=6721476847
[2025-07-11 12:58:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 16:02:17]  *** The last 200 lines of the pilot log: ***
[2025-07-11 16:02:17] 2025-07-11 20:01:40,898 | INFO     | PID=24129 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-11 16:02:17] 2025-07-11 20:01:41,899 | INFO     | 10961s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-11 16:02:17] 2025-07-11 20:01:42,669 | INFO     | monitor loop #808: job 0:6721476847 is in state 'finished'
[2025-07-11 16:02:17] 2025-07-11 20:01:42,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,653 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-11 16:02:17] 2025-07-11 20:01:44,657 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-07-11 16:02:17] 2025-07-11 20:01:44,659 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6721476847/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,660 | INFO     | extracted standard info from prmon json
[2025-07-11 16:02:17] 2025-07-11 20:01:44,660 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 16:02:17] 2025-07-11 20:01:44,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 16:02:17] 2025-07-11 20:01:44,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 16:02:17] 2025-07-11 20:01:44,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 16:02:17] 2025-07-11 20:01:44,666 | INFO     | fitting pss+swap vs Time
[2025-07-11 16:02:17] 2025-07-11 20:01:44,666 | INFO     | sum of square deviations: 1778377530.0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,668 | INFO     | sum of deviations: 23474261743.000008
[2025-07-11 16:02:17] 2025-07-11 20:01:44,668 | INFO     | mean x: 1752258607.0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,668 | INFO     | mean y: 2527419.9776536315
[2025-07-11 16:02:17] 2025-07-11 20:01:44,668 | INFO     | -- intersect: -23126969263.52047
[2025-07-11 16:02:17] 2025-07-11 20:01:44,669 | INFO     | intersect: -23126969263.52047
[2025-07-11 16:02:17] 2025-07-11 20:01:44,669 | INFO     | chi2: 1.559038072176476
[2025-07-11 16:02:17] 2025-07-11 20:01:44,670 | INFO     | sum of square deviations: 1633472487.5
[2025-07-11 16:02:17] 2025-07-11 20:01:44,671 | INFO     | sum of deviations: 22572562701.499996
[2025-07-11 16:02:17] 2025-07-11 20:01:44,671 | INFO     | mean x: 1752258454.5
[2025-07-11 16:02:17] 2025-07-11 20:01:44,671 | INFO     | mean y: 2526470.775862069
[2025-07-11 16:02:17] 2025-07-11 20:01:44,671 | INFO     | -- intersect: -24211510885.90458
[2025-07-11 16:02:17] 2025-07-11 20:01:44,672 | INFO     | intersect: -24211510885.90458
[2025-07-11 16:02:17] 2025-07-11 20:01:44,672 | INFO     | chi2: 1.560430184135484
[2025-07-11 16:02:17] 2025-07-11 20:01:44,672 | INFO     | current chi2=1.560430184135484 (change=-0.08929300597928705 %)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,672 | INFO     | right removable region: 173
[2025-07-11 16:02:17] 2025-07-11 20:01:44,673 | INFO     | sum of square deviations: 1633472487.5
[2025-07-11 16:02:17] 2025-07-11 20:01:44,674 | INFO     | sum of deviations: -4280529759.0000005
[2025-07-11 16:02:17] 2025-07-11 20:01:44,674 | INFO     | mean x: 1752258759.5
[2025-07-11 16:02:17] 2025-07-11 20:01:44,674 | INFO     | mean y: 2556256.379310345
[2025-07-11 16:02:17] 2025-07-11 20:01:44,674 | INFO     | -- intersect: 4594366539.629138
[2025-07-11 16:02:17] 2025-07-11 20:01:44,674 | INFO     | intersect: 4594366539.629138
[2025-07-11 16:02:17] 2025-07-11 20:01:44,675 | INFO     | chi2: 0.0925147897953118
[2025-07-11 16:02:17] 2025-07-11 20:01:44,675 | INFO     | current chi2=0.0925147897953118 (change=94.0659056730951 %)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,675 | INFO     | sum of square deviations: 1496660620.0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,676 | INFO     | sum of deviations: -4764757580.000003
[2025-07-11 16:02:17] 2025-07-11 20:01:44,676 | INFO     | mean x: 1752258912.0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,677 | INFO     | mean y: 2556734.0473372783
[2025-07-11 16:02:17] 2025-07-11 20:01:44,677 | INFO     | -- intersect: 5581035128.885145
[2025-07-11 16:02:17] 2025-07-11 20:01:44,677 | INFO     | intersect: 5581035128.885145
[2025-07-11 16:02:17] 2025-07-11 20:01:44,677 | INFO     | chi2: 0.07518043393934072
[2025-07-11 16:02:17] 2025-07-11 20:01:44,677 | INFO     | current chi2=0.07518043393934072 (change=18.73684833994997 %)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,677 | INFO     | left removable region: 20
[2025-07-11 16:02:17] 2025-07-11 20:01:44,678 | INFO     | sum of square deviations: 1110539892.0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,679 | INFO     | sum of deviations: 4955230751.0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,679 | INFO     | mean x: 1752259034.0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,679 | INFO     | mean y: 2543733.3333333335
[2025-07-11 16:02:17] 2025-07-11 20:01:44,679 | INFO     | -- intersect: -7816038842.171622
[2025-07-11 16:02:17] 2025-07-11 20:01:44,679 | INFO     | intersect: -7816038842.171622
[2025-07-11 16:02:17] 2025-07-11 20:01:44,679 | INFO     | chi2: 0.00022508103835815194
[2025-07-11 16:02:17] 2025-07-11 20:01:44,679 | INFO     | -- intersect: -7816038842.171622
[2025-07-11 16:02:17] 2025-07-11 20:01:44,680 | INFO     | current memory leak: 4.46 B/s (using 153 data points, chi2=0.00)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,680 | INFO     | could have reported an average CPU frequency of 2014 MHz (9 samples)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,680 | INFO     | ..............................
[2025-07-11 16:02:17] 2025-07-11 20:01:44,680 | INFO     | . Timing measurements:
[2025-07-11 16:02:17] 2025-07-11 20:01:44,680 | INFO     | . get job = 0 s
[2025-07-11 16:02:17] 2025-07-11 20:01:44,681 | INFO     | . initial setup = 2 s
[2025-07-11 16:02:17] 2025-07-11 20:01:44,681 | INFO     | . payload setup = 12 s
[2025-07-11 16:02:17] 2025-07-11 20:01:44,681 | INFO     | . stage-in = 0 s
[2025-07-11 16:02:17] 2025-07-11 20:01:44,681 | INFO     | . payload execution = 10916 s
[2025-07-11 16:02:17] 2025-07-11 20:01:44,681 | INFO     | . stage-out = 2 s
[2025-07-11 16:02:17] 2025-07-11 20:01:44,681 | INFO     | . log creation = 0 s
[2025-07-11 16:02:17] 2025-07-11 20:01:44,681 | INFO     | ..............................
[2025-07-11 16:02:17] 2025-07-11 20:01:44,779 | INFO     | 
[2025-07-11 16:02:17] 2025-07-11 20:01:44,779 | INFO     | job summary report
[2025-07-11 16:02:17] 2025-07-11 20:01:44,779 | INFO     | --------------------------------------------------
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | PanDA job id: 6721476847
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | task id: 45482148
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | errors: (none)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | pilot state: finished 
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | transexitcode: 0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | exeerrorcode: 0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | exeerrordiag: 
[2025-07-11 16:02:17] 2025-07-11 20:01:44,780 | INFO     | exitcode: 0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,781 | INFO     | exitmsg: OK
[2025-07-11 16:02:17] 2025-07-11 20:01:44,781 | INFO     | cpuconsumptiontime: 82823 s
[2025-07-11 16:02:17] 2025-07-11 20:01:44,781 | INFO     | nevents: 400
[2025-07-11 16:02:17] 2025-07-11 20:01:44,781 | INFO     | neventsw: 0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,781 | INFO     | pid: 30685
[2025-07-11 16:02:17] 2025-07-11 20:01:44,781 | INFO     | pgrp: 30685
[2025-07-11 16:02:17] 2025-07-11 20:01:44,781 | INFO     | corecount: 8
[2025-07-11 16:02:17] 2025-07-11 20:01:44,781 | INFO     | event service: False
[2025-07-11 16:02:17] 2025-07-11 20:01:44,782 | INFO     | sizes: {0: 2393576, 6: 2393838, 11: 2393866, 10931: 2422900, 10932: 2422899, 10935: 2431953, 10937: 2432137, 10944: 2432395}
[2025-07-11 16:02:17] 2025-07-11 20:01:44,782 | INFO     | --------------------------------------------------
[2025-07-11 16:02:17] 2025-07-11 20:01:44,782 | INFO     | 
[2025-07-11 16:02:17] 2025-07-11 20:01:44,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-11 16:02:17] 2025-07-11 20:01:44,806 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,807 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,807 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,808 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,808 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 16:02:17] 2025-07-11 20:01:44,810 | INFO     | job 6721476847 has completed (purged errors)
[2025-07-11 16:02:17] 2025-07-11 20:01:44,811 | INFO     | overall cleanup function is called
[2025-07-11 16:02:17] 2025-07-11 20:01:45,819 | INFO     | --- collectZombieJob: --- 10, [30685]
[2025-07-11 16:02:17] 2025-07-11 20:01:45,819 | INFO     | zombie collector waiting for pid 30685
[2025-07-11 16:02:17] 2025-07-11 20:01:45,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 16:02:17] 2025-07-11 20:01:45,819 | INFO     | collected zombie processes
[2025-07-11 16:02:17] 2025-07-11 20:01:45,819 | INFO     | will attempt to kill all subprocesses of pid=30685
[2025-07-11 16:02:17] 2025-07-11 20:01:45,910 | INFO     | process IDs to be killed: [30685] (in reverse order)
[2025-07-11 16:02:17] 2025-07-11 20:01:45,964 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 16:02:17] 2025-07-11 20:01:45,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 16:02:17] 2025-07-11 20:01:45,968 | INFO     | did not find any defunct processes belonging to 30685
[2025-07-11 16:02:17] 2025-07-11 20:01:45,972 | INFO     | did not find any defunct processes belonging to 30685
[2025-07-11 16:02:17] 2025-07-11 20:01:45,972 | INFO     | ready for new job
[2025-07-11 16:02:17] 2025-07-11 20:01:45,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 16:02:17] 2025-07-11 20:01:45,974 | INFO     | ***************************************
[2025-07-11 16:02:17] 2025-07-11 20:01:45,974 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 16:02:17] 2025-07-11 20:01:45,974 | INFO     | ***************************************
[2025-07-11 16:02:17] 2025-07-11 20:01:45,974 | INFO     | 
[2025-07-11 16:02:17] 2025-07-11 20:01:45,974 | INFO     | architecture information:
[2025-07-11 16:02:17] 2025-07-11 20:01:45,975 | INFO     | executing command: cat /etc/os-release
[2025-07-11 16:02:17] 2025-07-11 20:01:45,992 | INFO     | cat /etc/os-release:
[2025-07-11 16:02:17] NAME="CentOS Linux"
[2025-07-11 16:02:17] VERSION="7 (Core)"
[2025-07-11 16:02:17] ID="centos"
[2025-07-11 16:02:17] ID_LIKE="rhel fedora"
[2025-07-11 16:02:17] VERSION_ID="7"
[2025-07-11 16:02:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 16:02:17] ANSI_COLOR="0;31"
[2025-07-11 16:02:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 16:02:17] HOME_URL="https://www.centos.org/"
[2025-07-11 16:02:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 16:02:17] 
[2025-07-11 16:02:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 16:02:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 16:02:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 16:02:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 16:02:17] 
[2025-07-11 16:02:17] 2025-07-11 20:01:45,993 | INFO     | ***************************************
[2025-07-11 16:02:17] 2025-07-11 20:01:46,496 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-11 16:02:17] 2025-07-11 20:01:46,516 | INFO     | sufficient remaining disk space (18352177152 B)
[2025-07-11 16:02:17] 2025-07-11 20:01:46,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 16:02:17] 2025-07-11 20:01:46,517 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 16:02:17] 2025-07-11 20:01:46,517 | INFO     | update_server=False
[2025-07-11 16:02:17] 2025-07-11 20:01:46,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 16:02:17] 2025-07-11 20:01:46,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 16:02:17] 2025-07-11 20:01:46,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 16:02:17] 2025-07-11 20:01:46,518 | INFO     | aborting loop
[2025-07-11 16:02:17] 2025-07-11 20:01:46,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 16:02:17] 2025-07-11 20:01:46,675 | INFO     | all data control threads have been joined
[2025-07-11 16:02:17] 2025-07-11 20:01:46,884 | INFO     | all payload control threads have been joined
[2025-07-11 16:02:17] 2025-07-11 20:01:47,519 | INFO     | [job] job monitor thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:47,522 | INFO     | [job] queue monitor thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:47,523 | INFO     | [job] retrieve thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:47,576 | INFO     | [data] copytool_in thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:47,612 | INFO     | all job control threads have been joined
[2025-07-11 16:02:17] 2025-07-11 20:01:47,681 | INFO     | [data] control thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:47,870 | INFO     | [payload] validate_post thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:47,889 | INFO     | [payload] control thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:48,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 16:02:17] 2025-07-11 20:01:48,257 | INFO     | [payload] failed_post thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:48,326 | INFO     | [job] validate thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:48,328 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:48,379 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:48,523 | INFO     | [data] copytool_out thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:48,618 | INFO     | [job] control thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:48,785 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:52,036 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:57,076 | INFO     | job.realtimelogging is not enabled
[2025-07-11 16:02:17] 2025-07-11 20:01:58,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 16:02:17] 2025-07-11 20:01:59,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690370639680)>', '<ExcThread(monitor, started 139689684088576)>']
[2025-07-11 16:02:17] 2025-07-11 20:02:04,338 | INFO     | all workflow threads have been joined
[2025-07-11 16:02:17] 2025-07-11 20:02:04,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 16:02:17] 2025-07-11 20:02:04,339 | INFO     | traces error code: 0
[2025-07-11 16:02:17] 2025-07-11 20:02:04,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 16:02:17] 2025-07-11 20:02:17,120 | INFO     | PID=24129 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-11 16:02:17] 2025-07-11 20:02:17,121 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 16:02:17] 2025-07-11 20:02:17,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 16:02:17] 2025-07-11 20:02:17,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 16:02:17] 2025-07-11 20:02:17,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 16:02:17] 2025-07-11 20:02:17,121 | INFO     | [monitor] control thread has ended
[2025-07-11 16:02:17] 2025-07-11 20:02:17,236 [wrapper] ==== pilot stdout END ====
[2025-07-11 16:02:17] 2025-07-11 20:02:17,240 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 16:02:17] 2025-07-11 20:02:17,245 [wrapper] pilotpid: 24129
[2025-07-11 16:02:17] 2025-07-11 20:02:17,249 [wrapper] Pilot exit status: 0
[2025-07-11 16:02:17] 2025-07-11 20:02:17,267 [wrapper] pandaids: 6721476847
[2025-07-11 16:02:17] 2025-07-11 20:02:17,313 [wrapper] cleanup supervisor_pilot 11885 24130
[2025-07-11 16:02:17] 2025-07-11 20:02:17,318 [wrapper] Test setup, not cleaning
[2025-07-11 16:02:17] 2025-07-11 20:02:17,323 [wrapper] apfmon messages muted
[2025-07-11 16:02:17] 2025-07-11 20:02:17,328 [wrapper] ==== wrapper stdout END ====
[2025-07-11 16:02:17] 2025-07-11 20:02:17,332 [wrapper] ==== wrapper stderr END ====
[2025-07-11 16:02:17]  *** Error codes and diagnostics ***
[2025-07-11 16:02:17]     "exeErrorCode": 0,
[2025-07-11 16:02:17]     "exeErrorDiag": "",
[2025-07-11 16:02:17]     "pilotErrorCode": 0,
[2025-07-11 16:02:17]     "pilotErrorDiag": "",
[2025-07-11 16:02:17]  *** Listing of results directory ***
[2025-07-11 16:02:17] total 569556
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas    530466 Jul  7 03:59 pilot3.tar.gz
[2025-07-11 16:02:17] -rwx------ 1 boincer umatlas     36292 Jul  7 04:13 runpilot2-wrapper.sh
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas      5112 Jul  7 04:13 queuedata.json
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas       100 Jul 11 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 16:02:17] -rwxr-xr-x 1 boincer umatlas      7986 Jul 11 12:58 run_atlas
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas       105 Jul 11 12:58 job.xml
[2025-07-11 16:02:17] -rw-r--r-- 2 boincer umatlas 315704035 Jul 11 12:58 EVNT.45482146._000634.pool.root.1
[2025-07-11 16:02:17] -rw-r--r-- 2 boincer umatlas     15095 Jul 11 12:58 start_atlas.sh
[2025-07-11 16:02:17] drwxrwx--x 2 boincer umatlas      4096 Jul 11 12:58 shared
[2025-07-11 16:02:17] -rw-r--r-- 2 boincer umatlas    542903 Jul 11 12:58 input.tar.gz
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas         0 Jul 11 12:58 boinc_lockfile
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas      2617 Jul 11 12:58 pandaJob.out
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas    976915 Jul 11 12:59 agis_schedconf.cvmfs.json
[2025-07-11 16:02:17] drwx------ 4 boincer umatlas      4096 Jul 11 12:59 pilot3
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas      5824 Jul 11 15:57 init_data.xml
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas 260967657 Jul 11 16:00 HITS.45482148._015907.pool.root.1
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas       530 Jul 11 16:01 boinc_task_state.xml
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas      1050 Jul 11 16:01 memory_monitor_summary.json
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas   1588641 Jul 11 16:01 agis_ddmendpoints.agis.ALL.json
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas    360093 Jul 11 16:01 log.45482148._015907.job.log.tgz.1
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas        95 Jul 11 16:01 pilot_heartbeat.json
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas      7841 Jul 11 16:01 heartbeat.json
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas      8192 Jul 11 16:01 boinc_mmap_file
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas        28 Jul 11 16:01 wrapper_checkpoint.txt
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas       745 Jul 11 16:02 pilotlog.txt
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas    979658 Jul 11 16:02 log.45482148._015907.job.log.1
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas       357 Jul 11 16:02 output.list
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas       620 Jul 11 16:02 runtime_log
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas   1361920 Jul 11 16:02 result.tar.gz
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas      8656 Jul 11 16:02 runtime_log.err
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas       662 Jul 11 16:02 MgULDmT9vs7n9Rq4apOajLDm4fhM0noT9bVof3QYDme6rKDmkz7JVo.diag
[2025-07-11 16:02:17] -rw-r--r-- 1 boincer umatlas     21244 Jul 11 16:02 stderr.txt
[2025-07-11 16:02:17] HITS file was successfully produced:
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas 260967657 Jul 11 16:00 shared/HITS.pool.root.1
[2025-07-11 16:02:17]  *** Contents of shared directory: ***
[2025-07-11 16:02:17] total 565048
[2025-07-11 16:02:17] -rw-r--r-- 2 boincer umatlas 315704035 Jul 11 12:58 ATLAS.root_0
[2025-07-11 16:02:17] -rw-r--r-- 2 boincer umatlas     15095 Jul 11 12:58 start_atlas.sh
[2025-07-11 16:02:17] -rw-r--r-- 2 boincer umatlas    542903 Jul 11 12:58 input.tar.gz
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas 260967657 Jul 11 16:00 HITS.pool.root.1
[2025-07-11 16:02:17] -rw------- 1 boincer umatlas   1361920 Jul 11 16:02 result.tar.gz
16:02:19 (20172): run_atlas exited; CPU time 82744.688466
16:02:19 (20172): called boinc_finish(0)

</stderr_txt>
]]>

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