Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-11 16:51:19 (2013664): Detected: vboxwrapper 26206
2025-07-11 16:51:19 (2013664): Detected: BOINC client v8.2.4
2025-07-11 16:51:20 (2013664): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-07-11 16:51:20 (2013664): Successfully copied 'init_data.xml' to the shared directory.
2025-07-11 16:51:20 (2013664): Create VM. (boinc_be4c3a9388ce64aa, slot#26)
2025-07-11 16:51:21 (2013664): Setting Memory Size for VM. (4096MB)
2025-07-11 16:51:21 (2013664): Setting CPU Count for VM. (1)
2025-07-11 16:51:21 (2013664): Setting Chipset Options for VM.
2025-07-11 16:51:21 (2013664): Setting Graphics Controller Options for VM.
2025-07-11 16:51:22 (2013664): Setting Boot Options for VM.
2025-07-11 16:51:22 (2013664): Setting Network Configuration for NAT.
2025-07-11 16:51:22 (2013664): Enabling VM Network Access.
2025-07-11 16:51:22 (2013664): Disabling USB Support for VM.
2025-07-11 16:51:23 (2013664): Disabling COM Port Support for VM.
2025-07-11 16:51:23 (2013664): Disabling LPT Port Support for VM.
2025-07-11 16:51:23 (2013664): Disabling Audio Support for VM.
2025-07-11 16:51:23 (2013664): Disabling Clipboard Support for VM.
2025-07-11 16:51:24 (2013664): Disabling Drag and Drop Support for VM.
2025-07-11 16:51:24 (2013664): Adding storage controller(s) to VM.
2025-07-11 16:51:24 (2013664): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-11 16:51:25 (2013664): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-11 16:51:25 (2013664): forwarding host port 53087 to guest port 80
2025-07-11 16:51:25 (2013664): Enabling remote desktop for VM.
2025-07-11 16:51:26 (2013664): Enabling shared directory for VM.
2025-07-11 16:51:26 (2013664): Starting VM using VBoxManage interface. (boinc_be4c3a9388ce64aa, slot#26)
2025-07-11 16:51:28 (2013664): Successfully started VM. (PID = '2014073')
2025-07-11 16:51:28 (2013664): Reporting VM Process ID to BOINC.
2025-07-11 16:51:28 (2013664): Guest Log: BIOS: VirtualBox 7.0.20
2025-07-11 16:51:28 (2013664): Guest Log: CPUID EDX: 0x178bfbff
2025-07-11 16:51:28 (2013664): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-11 16:51:28 (2013664): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-11 16:51:28 (2013664): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-11 16:51:28 (2013664): Detected: Web Application Enabled (http://localhost:53087)
2025-07-11 16:51:28 (2013664): Detected: Remote Desktop Enabled (localhost:57321)
2025-07-11 16:51:28 (2013664): Preference change detected
2025-07-11 16:51:28 (2013664): Setting CPU throttle for VM. (100%)
2025-07-11 16:51:28 (2013664): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-11 16:51:30 (2013664): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-11 16:51:30 (2013664): Guest Log: BIOS: Booting from Hard Disk...
2025-07-11 16:51:33 (2013664): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-11 16:51:33 (2013664): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-11 16:51:33 (2013664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-11 16:51:37 (2013664): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-11 16:51:37 (2013664): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-11 16:51:50 (2013664): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-11 16:51:50 (2013664): Guest Log: 00:00:00.000181 main     Log opened 2025-07-11T14:51:48.678972000Z
2025-07-11 16:51:50 (2013664): Guest Log: 00:00:00.000318 main     OS Product: Linux
2025-07-11 16:51:50 (2013664): Guest Log: 00:00:00.000354 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-11 16:51:50 (2013664): Guest Log: 00:00:00.000375 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-11 16:51:50 (2013664): Guest Log: 00:00:00.000398 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-11 16:51:50 (2013664): Guest Log: 00:00:00.000399 main     Process ID: 1240
2025-07-11 16:51:50 (2013664): Guest Log: 00:00:00.000399 main     Package type: LINUX_64BITS_GENERIC
2025-07-11 16:51:50 (2013664): Guest Log: 00:00:00.002685 main     5.2.32 r132073 started. Verbose level = 0
2025-07-11 16:51:50 (2013664): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-11 16:51:50 (2013664): Guest Log: [INFO] Mounting shared directory
2025-07-11 16:51:50 (2013664): Guest Log: [INFO] Checking for init_data.xml
2025-07-11 16:51:53 (2013664): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-11 16:51:53 (2013664): Guest Log: [INFO] Detected branch: prod
2025-07-11 16:51:53 (2013664): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-11 16:51:53 (2013664): Guest Log: Copying input files
2025-07-11 16:51:55 (2013664): Guest Log: Copied input files into RunAtlas.
2025-07-11 16:51:56 (2013664): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-07-11 16:52:09 (2013664): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-11 16:52:09 (2013664): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-11 16:52:09 (2013664): Guest Log: 2.6.3.0 1509 0 31536 148201 4 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-07-11 16:52:10 (2013664): Guest Log: copied the webapp to /var/www
2025-07-11 16:52:10 (2013664): Guest Log: core_number=1
2025-07-11 16:52:10 (2013664): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-11 16:52:10 (2013664): Guest Log:  *** Starting ATLAS job. (PandaID=6721338414 taskID=45482148) ***
2025-07-11 18:30:28 (2013664): Status Report: Elapsed Time: '6000.000000'
2025-07-11 18:30:28 (2013664): Status Report: CPU Time: '5890.270000'
2025-07-11 20:09:28 (2013664): Status Report: Elapsed Time: '12000.000000'
2025-07-11 20:09:28 (2013664): Status Report: CPU Time: '11835.400000'
2025-07-11 21:48:28 (2013664): Status Report: Elapsed Time: '18000.000000'
2025-07-11 21:48:28 (2013664): Status Report: CPU Time: '17780.260000'
2025-07-11 23:27:29 (2013664): Status Report: Elapsed Time: '24000.000000'
2025-07-11 23:27:29 (2013664): Status Report: CPU Time: '23725.460000'
2025-07-12 01:06:29 (2013664): Status Report: Elapsed Time: '30000.000000'
2025-07-12 01:06:29 (2013664): Status Report: CPU Time: '29670.160000'
2025-07-12 02:45:29 (2013664): Status Report: Elapsed Time: '36000.000000'
2025-07-12 02:45:29 (2013664): Status Report: CPU Time: '35615.180000'
2025-07-12 04:24:30 (2013664): Status Report: Elapsed Time: '42000.000000'
2025-07-12 04:24:30 (2013664): Status Report: CPU Time: '41559.840000'
2025-07-12 06:03:30 (2013664): Status Report: Elapsed Time: '48000.000000'
2025-07-12 06:03:30 (2013664): Status Report: CPU Time: '47504.670000'
2025-07-12 07:42:30 (2013664): Status Report: Elapsed Time: '54000.000000'
2025-07-12 07:42:30 (2013664): Status Report: CPU Time: '53449.940000'
2025-07-12 09:21:31 (2013664): Status Report: Elapsed Time: '60000.000000'
2025-07-12 09:21:31 (2013664): Status Report: CPU Time: '59395.050000'
2025-07-12 11:00:31 (2013664): Status Report: Elapsed Time: '66000.000000'
2025-07-12 11:00:31 (2013664): Status Report: CPU Time: '65339.820000'
2025-07-12 12:39:31 (2013664): Status Report: Elapsed Time: '72000.000000'
2025-07-12 12:39:31 (2013664): Status Report: CPU Time: '71285.260000'
2025-07-12 14:05:16 (2013664): Guest Log:  *** Job finished ***
2025-07-12 14:05:16 (2013664): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:01,177 | INFO     | all workflow threads have been joined
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:01,177 | INFO     | end of generic workflow (traces error code: 0)
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:01,178 | INFO     | traces error code: 0
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:01,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,014 | INFO     | PID=5772 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,016 | INFO     | found 0 job(s) in 20 queues
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,017 | INFO     | [monitor] control thread has ended
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,130 [wrapper] ==== pilot stdout END ====
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,135 [wrapper] ==== wrapper stdout RESUME ====
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,139 [wrapper] pilotpid: 5772
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,144 [wrapper] Pilot exit status: 0
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,190 [wrapper] pandaids: 6721338414
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,217 [wrapper] cleanup supervisor_pilot 14401 5773
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,222 [wrapper] Test setup, not cleaning
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,227 [wrapper] apfmon messages muted
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,231 [wrapper] ==== wrapper stdout END ====
2025-07-12 14:05:16 (2013664): Guest Log: 2025-07-12 12:05:15,235 [wrapper] ==== wrapper stderr END ====
2025-07-12 14:05:16 (2013664): Guest Log:  *** Error codes and diagnostics ***
2025-07-12 14:05:16 (2013664): Guest Log:     "exeErrorCode": 0,
2025-07-12 14:05:16 (2013664): Guest Log:     "exeErrorDiag": "",
2025-07-12 14:05:16 (2013664): Guest Log:     "pilotErrorCode": 0,
2025-07-12 14:05:16 (2013664): Guest Log:     "pilotErrorDiag": "",
2025-07-12 14:05:16 (2013664): Guest Log:  *** Listing of results directory ***
2025-07-12 14:05:16 (2013664): Guest Log: total 279364
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul  7 05:37 pilot3.tar.gz
2025-07-12 14:05:16 (2013664): Guest Log: -rwx------. 1 atlas atlas     36292 Jul  7 06:02 runpilot2-wrapper.sh
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul  7 06:02 queuedata.json
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 atlas atlas      9753 Jul 11 14:51 init_data.xml
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 atlas atlas    542905 Jul 11 14:51 input.tar.gz
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 11 14:51 start_atlas.sh
2025-07-12 14:05:16 (2013664): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 11 14:51 EVNT.45482146._000551.pool.root.1 -> /data/./ATLAS.root_0
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 atlas atlas      2617 Jul 11 14:52 pandaJob.out
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas    976939 Jul 11 14:52 agis_schedconf.cvmfs.json
2025-07-12 14:05:16 (2013664): Guest Log: drwx------. 4 atlas atlas      4096 Jul 11 14:52 pilot3
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas 267537727 Jul 12 12:03 HITS.45482148._013818.pool.root.1
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas      1025 Jul 12 12:04 memory_monitor_summary.json
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas   1588641 Jul 12 12:04 agis_ddmendpoints.agis.ALL.json
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas    806712 Jul 12 12:04 log.45482148._013818.job.log.tgz.1
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas      7820 Jul 12 12:04 heartbeat.json
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas        95 Jul 12 12:05 pilot_heartbeat.json
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas       744 Jul 12 12:05 pilotlog.txt
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas   6559650 Jul 12 12:05 log.45482148._013818.job.log.1
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas       357 Jul 12 12:05 output.list
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 12 12:05 runtime_log
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas   7383040 Jul 12 12:05 result.tar.gz
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas       657 Jul 12 12:05 GO7MDmK7ts7n9Rq4apOajLDm4fhM0noT9bVof3QYDmatrKDm0bFxon.diag
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 atlas atlas      8473 Jul 12 12:05 runtime_log.err
2025-07-12 14:05:16 (2013664): Guest Log: Looking for outputfile HITS.45482148._013818.pool.root.1
2025-07-12 14:05:16 (2013664): Guest Log: HITS file was successfully produced
2025-07-12 14:05:16 (2013664): Guest Log: -rw-------. 1 atlas atlas 267537727 Jul 12 12:03 /home/atlas/RunAtlas/HITS.45482148._013818.pool.root.1
2025-07-12 14:05:16 (2013664): Guest Log: Successfully finished the ATLAS job!
2025-07-12 14:05:16 (2013664): Guest Log: Copying the results back to the shared directory!
2025-07-12 14:05:16 (2013664): Guest Log:  *** Contents of shared directory: ***
2025-07-12 14:05:16 (2013664): Guest Log: total 321168
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 root root 320911866 Jul 11 14:51 ATLAS.root_0
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 root root      9753 Jul 11 14:51 init_data.xml
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 root root    542905 Jul 11 14:51 input.tar.gz
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 root root   7383040 Jul 12 12:05 result.tar.gz
2025-07-12 14:05:16 (2013664): Guest Log: -rw-r--r--. 1 root root     15095 Jul 11 14:51 start_atlas.sh
2025-07-12 14:05:16 (2013664): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-12 14:05:16 (2013664): VM Completion File Detected.
2025-07-12 14:05:16 (2013664): Powering off VM.
2025-07-12 14:05:16 (2013664): Successfully stopped VM.
2025-07-12 14:05:16 (2013664): Deregistering VM. (boinc_be4c3a9388ce64aa, slot#26)
2025-07-12 14:05:17 (2013664): Removing network bandwidth throttle group from VM.
2025-07-12 14:05:17 (2013664): Removing VM from VirtualBox.
14:05:22 (2013664): called boinc_finish(0)

</stderr_txt>
]]>

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