Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:41:30 (4092840): wrapper (7.7.26015): starting
20:41:30 (4092840): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 20:41:30] Arguments: --nthreads 4
[2025-07-11 20:41:30] Threads: 4
[2025-07-11 20:41:30] Checking for CVMFS
[2025-07-11 20:41:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 20:41:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 20:41:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 20:41:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 20:41:32] 2.13.1.0 3130124 1619 49344 148215 2 187 2403542 4194305 2754 130560 0 2470844 99.995 66034 65 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-11 20:41:32] CVMFS is ok
[2025-07-11 20:41:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 20:41:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-11 20:41:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-11 20:41:32] Further information can be found at the LHC@home message board.
[2025-07-11 20:41:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 20:41:32] Checking for apptainer binary...
[2025-07-11 20:41:32] apptainer is not installed, using version from CVMFS
[2025-07-11 20:41:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 20:41:33] Ryze
[2025-07-11 20:41:33] apptainer works
[2025-07-11 20:41:33] Set ATHENA_PROC_NUMBER=4
[2025-07-11 20:41:33] Set ATHENA_CORE_NUMBER=4
[2025-07-11 20:41:33] Starting ATLAS job with PandaID=6721085755
[2025-07-11 20:41:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 23:28:16]  *** The last 200 lines of the pilot log: ***
[2025-07-11 23:28:16] 2025-07-11 21:27:41,737 | INFO     | executing command: lscpu
[2025-07-11 23:28:16] 2025-07-11 21:27:41,769 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-11 23:28:16] 2025-07-11 21:27:43,147 | INFO     | monitor loop #751: job 0:6721085755 is in state 'finished'
[2025-07-11 23:28:16] 2025-07-11 21:27:43,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 23:28:16] 2025-07-11 21:27:44,789 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-11 23:28:16] 2025-07-11 21:27:44,792 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3520.019666666667
[2025-07-11 23:28:16] 2025-07-11 21:27:44,795 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6721085755/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 23:28:16] 2025-07-11 21:27:44,796 | INFO     | extracted standard info from prmon json
[2025-07-11 23:28:16] 2025-07-11 21:27:44,796 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 23:28:16] 2025-07-11 21:27:44,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 23:28:16] 2025-07-11 21:27:44,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 23:28:16] 2025-07-11 21:27:44,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 23:28:16] 2025-07-11 21:27:44,798 | INFO     | fitting pss+swap vs Time
[2025-07-11 23:28:16] 2025-07-11 21:27:44,799 | INFO     | sum of square deviations: 1342841922.0
[2025-07-11 23:28:16] 2025-07-11 21:27:44,799 | INFO     | sum of deviations: 14084631051.0
[2025-07-11 23:28:16] 2025-07-11 21:27:44,799 | INFO     | mean x: 1752264265.0
[2025-07-11 23:28:16] 2025-07-11 21:27:44,799 | INFO     | mean y: 2347132.8220858895
[2025-07-11 23:28:16] 2025-07-11 21:27:44,800 | INFO     | -- intersect: -18376581371.002724
[2025-07-11 23:28:16] 2025-07-11 21:27:44,800 | INFO     | intersect: -18376581371.002724
[2025-07-11 23:28:16] 2025-07-11 21:27:44,800 | INFO     | chi2: 1.3981807211641724
[2025-07-11 23:28:16] 2025-07-11 21:27:44,800 | INFO     | sum of square deviations: 1223016419.5
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | sum of deviations: 13561723374.0
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | mean x: 1752264112.5
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | mean y: 2346467.2025316455
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | -- intersect: -19428072285.17025
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | intersect: -19428072285.17025
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | chi2: 1.399488996546884
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | current chi2=1.399488996546884 (change=-0.09356983420729016 %)
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | right removable region: 157
[2025-07-11 23:28:16] 2025-07-11 21:27:44,801 | INFO     | sum of square deviations: 1223016419.5
[2025-07-11 23:28:16] 2025-07-11 21:27:44,802 | INFO     | sum of deviations: -6992621570.499999
[2025-07-11 23:28:16] 2025-07-11 21:27:44,802 | INFO     | mean x: 1752264417.5
[2025-07-11 23:28:16] 2025-07-11 21:27:44,802 | INFO     | mean y: 2373525.601265823
[2025-07-11 23:28:16] 2025-07-11 21:27:44,802 | INFO     | -- intersect: 10020981426.253506
[2025-07-11 23:28:16] 2025-07-11 21:27:44,802 | INFO     | intersect: 10020981426.253506
[2025-07-11 23:28:16] 2025-07-11 21:27:44,803 | INFO     | chi2: 0.020393747032137914
[2025-07-11 23:28:16] 2025-07-11 21:27:44,803 | INFO     | current chi2=0.020393747032137914 (change=98.5414083656398 %)
[2025-07-11 23:28:16] 2025-07-11 21:27:44,803 | INFO     | sum of square deviations: 1110539892.0
[2025-07-11 23:28:16] 2025-07-11 21:27:44,803 | INFO     | sum of deviations: -6369683744.999999
[2025-07-11 23:28:16] 2025-07-11 21:27:44,803 | INFO     | mean x: 1752264570.0
[2025-07-11 23:28:16] 2025-07-11 21:27:44,804 | INFO     | mean y: 2372672.947712418
[2025-07-11 23:28:16] 2025-07-11 21:27:44,804 | INFO     | -- intersect: 10052773589.539381
[2025-07-11 23:28:16] 2025-07-11 21:27:44,804 | INFO     | intersect: 10052773589.539381
[2025-07-11 23:28:16] 2025-07-11 21:27:44,804 | INFO     | chi2: 0.02020935597341379
[2025-07-11 23:28:16] 2025-07-11 21:27:44,804 | INFO     | current chi2=0.02020935597341379 (change=0.9041548786181802 %)
[2025-07-11 23:28:16] 2025-07-11 21:27:44,804 | INFO     | left removable region: 20
[2025-07-11 23:28:16] 2025-07-11 21:27:44,804 | INFO     | sum of square deviations: 797291228.0
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | sum of deviations: -3547289689.9999995
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | mean x: 1752264692.0
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | mean y: 2368448.613138686
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | -- intersect: 7798503985.780524
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | intersect: 7798503985.780524
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | chi2: 0.016930865499683413
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | -- intersect: 7798503985.780524
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | current memory leak: -4.45 B/s (using 137 data points, chi2=0.02)
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | could have reported an average CPU frequency of 3587 MHz (9 samples)
[2025-07-11 23:28:16] 2025-07-11 21:27:44,805 | INFO     | ..............................
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | . Timing measurements:
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | . get job = 0 s
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | . initial setup = 2 s
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | . payload setup = 5 s
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | . stage-in = 0 s
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | . payload execution = 9933 s
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | . stage-out = 0 s
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | . log creation = 0 s
[2025-07-11 23:28:16] 2025-07-11 21:27:44,806 | INFO     | ..............................
[2025-07-11 23:28:16] 2025-07-11 21:27:45,174 | INFO     | 
[2025-07-11 23:28:16] 2025-07-11 21:27:45,174 | INFO     | job summary report
[2025-07-11 23:28:16] 2025-07-11 21:27:45,174 | INFO     | --------------------------------------------------
[2025-07-11 23:28:16] 2025-07-11 21:27:45,174 | INFO     | PanDA job id: 6721085755
[2025-07-11 23:28:16] 2025-07-11 21:27:45,174 | INFO     | task id: 45482062
[2025-07-11 23:28:16] 2025-07-11 21:27:45,174 | INFO     | errors: (none)
[2025-07-11 23:28:16] 2025-07-11 21:27:45,174 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | pilot state: finished 
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | transexitcode: 0
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | exeerrorcode: 0
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | exeerrordiag: 
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | exitcode: 0
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | exitmsg: OK
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | cpuconsumptiontime: 38601 s
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | nevents: 400
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | neventsw: 0
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | pid: 4103193
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | pgrp: 4103193
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | corecount: 4
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | event service: False
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | sizes: {0: 2393329, 1: 2393528, 4: 2393790, 11: 2393818, 9942: 2422547, 9943: 2422546, 9944: 2431742, 9945: 2431798, 9950: 2432056}
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | --------------------------------------------------
[2025-07-11 23:28:16] 2025-07-11 21:27:45,175 | INFO     | 
[2025-07-11 23:28:16] 2025-07-11 21:27:45,176 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-07-11 23:28:16] 2025-07-11 21:27:45,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 23:28:16] 2025-07-11 21:27:45,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 23:28:16] 2025-07-11 21:27:45,199 | INFO     | job 6721085755 has completed (purged errors)
[2025-07-11 23:28:16] 2025-07-11 21:27:45,199 | INFO     | overall cleanup function is called
[2025-07-11 23:28:16] 2025-07-11 21:27:46,204 | INFO     | --- collectZombieJob: --- 10, [4103193]
[2025-07-11 23:28:16] 2025-07-11 21:27:46,204 | INFO     | zombie collector waiting for pid 4103193
[2025-07-11 23:28:16] 2025-07-11 21:27:46,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 23:28:16] 2025-07-11 21:27:46,205 | INFO     | collected zombie processes
[2025-07-11 23:28:16] 2025-07-11 21:27:46,205 | INFO     | will attempt to kill all subprocesses of pid=4103193
[2025-07-11 23:28:16] 2025-07-11 21:27:46,331 | INFO     | process IDs to be killed: [4103193] (in reverse order)
[2025-07-11 23:28:16] 2025-07-11 21:27:46,388 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 23:28:16] 2025-07-11 21:27:46,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 23:28:16] 2025-07-11 21:27:46,392 | INFO     | did not find any defunct processes belonging to 4103193
[2025-07-11 23:28:16] 2025-07-11 21:27:46,395 | INFO     | did not find any defunct processes belonging to 4103193
[2025-07-11 23:28:16] 2025-07-11 21:27:46,395 | INFO     | ready for new job
[2025-07-11 23:28:16] 2025-07-11 21:27:46,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 23:28:16] 2025-07-11 21:27:46,397 | INFO     | ***************************************
[2025-07-11 23:28:16] 2025-07-11 21:27:46,397 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 23:28:16] 2025-07-11 21:27:46,397 | INFO     | ***************************************
[2025-07-11 23:28:16] 2025-07-11 21:27:46,397 | INFO     | 
[2025-07-11 23:28:16] 2025-07-11 21:27:46,398 | INFO     | architecture information:
[2025-07-11 23:28:16] 2025-07-11 21:27:46,398 | INFO     | executing command: cat /etc/os-release
[2025-07-11 23:28:16] 2025-07-11 21:27:46,414 | INFO     | cat /etc/os-release:
[2025-07-11 23:28:16] NAME="CentOS Linux"
[2025-07-11 23:28:16] VERSION="7 (Core)"
[2025-07-11 23:28:16] ID="centos"
[2025-07-11 23:28:16] ID_LIKE="rhel fedora"
[2025-07-11 23:28:16] VERSION_ID="7"
[2025-07-11 23:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 23:28:16] ANSI_COLOR="0;31"
[2025-07-11 23:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 23:28:16] HOME_URL="https://www.centos.org/"
[2025-07-11 23:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 23:28:16] 
[2025-07-11 23:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 23:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 23:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 23:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 23:28:16] 
[2025-07-11 23:28:16] 2025-07-11 21:27:46,414 | INFO     | ***************************************
[2025-07-11 23:28:16] 2025-07-11 21:27:46,917 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-07-11 23:28:16] 2025-07-11 21:27:46,934 | INFO     | sufficient remaining disk space (3211032264704 B)
[2025-07-11 23:28:16] 2025-07-11 21:27:46,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 23:28:16] 2025-07-11 21:27:46,935 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 23:28:16] 2025-07-11 21:27:46,935 | INFO     | update_server=False
[2025-07-11 23:28:16] 2025-07-11 21:27:46,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 23:28:16] 2025-07-11 21:27:46,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 23:28:16] 2025-07-11 21:27:46,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 23:28:16] 2025-07-11 21:27:46,935 | INFO     | aborting loop
[2025-07-11 23:28:16] 2025-07-11 21:27:47,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 23:28:16] 2025-07-11 21:27:47,932 | INFO     | all data control threads have been joined
[2025-07-11 23:28:16] 2025-07-11 21:27:47,939 | INFO     | [job] retrieve thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:47,941 | INFO     | [job] job monitor thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:47,941 | INFO     | [payload] failed_post thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:47,967 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:47,972 | INFO     | all job control threads have been joined
[2025-07-11 23:28:16] 2025-07-11 21:27:48,068 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:48,258 | INFO     | all payload control threads have been joined
[2025-07-11 23:28:16] 2025-07-11 21:27:48,343 | INFO     | [data] copytool_in thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:48,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:48,533 | INFO     | [payload] validate_post thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:48,937 | INFO     | [data] control thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:48,977 | INFO     | [job] control thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:49,099 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:49,204 | INFO     | [data] copytool_out thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:49,220 | INFO     | [job] validate thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:49,263 | INFO     | [payload] control thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:49,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 23:28:16] 2025-07-11 21:27:50,894 | INFO     | [job] queue monitor thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:50,940 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 23:28:16] 2025-07-11 21:27:51,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127525257062208)>', '<ExcThread(monitor, started 127524868704000)>']
[2025-07-11 23:28:16] 2025-07-11 21:27:56,092 | INFO     | all workflow threads have been joined
[2025-07-11 23:28:16] 2025-07-11 21:27:56,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 23:28:16] 2025-07-11 21:27:56,093 | INFO     | traces error code: 0
[2025-07-11 23:28:16] 2025-07-11 21:27:56,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 23:28:16] 2025-07-11 21:28:16,488 | INFO     | PID=4096567 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-11 23:28:16] 2025-07-11 21:28:16,488 | INFO     | .. there are 4 such processes running
[2025-07-11 23:28:16] 2025-07-11 21:28:16,488 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 23:28:16] 2025-07-11 21:28:16,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 23:28:16] 2025-07-11 21:28:16,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 23:28:16] 2025-07-11 21:28:16,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 23:28:16] 2025-07-11 21:28:16,489 | INFO     | [monitor] control thread has ended
[2025-07-11 23:28:16] 2025-07-11 21:28:16,586 [wrapper] ==== pilot stdout END ====
[2025-07-11 23:28:16] 2025-07-11 21:28:16,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 23:28:16] 2025-07-11 21:28:16,591 [wrapper] pilotpid: 4096567
[2025-07-11 23:28:16] 2025-07-11 21:28:16,594 [wrapper] Pilot exit status: 0
[2025-07-11 23:28:16] 2025-07-11 21:28:16,602 [wrapper] pandaids: 6721085755
[2025-07-11 23:28:16] 2025-07-11 21:28:16,634 [wrapper] cleanup supervisor_pilot   10464 4096568
[2025-07-11 23:28:16] 2025-07-11 21:28:16,636 [wrapper] Test setup, not cleaning
[2025-07-11 23:28:16] 2025-07-11 21:28:16,638 [wrapper] apfmon messages muted
[2025-07-11 23:28:16] 2025-07-11 21:28:16,641 [wrapper] ==== wrapper stdout END ====
[2025-07-11 23:28:16] 2025-07-11 21:28:16,644 [wrapper] ==== wrapper stderr END ====
[2025-07-11 23:28:16]  *** Error codes and diagnostics ***
[2025-07-11 23:28:16]     "exeErrorCode": 0,
[2025-07-11 23:28:16]     "exeErrorDiag": "",
[2025-07-11 23:28:16]     "pilotErrorCode": 0,
[2025-07-11 23:28:16]     "pilotErrorDiag": "",
[2025-07-11 23:28:16]  *** Listing of results directory ***
[2025-07-11 23:28:16] insgesamt 578000
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc    530466 Jul  7 03:28 pilot3.tar.gz
[2025-07-11 23:28:16] -rwx------ 1 boinc boinc     36292 Jul  7 03:30 runpilot2-wrapper.sh
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc      5112 Jul  7 03:30 queuedata.json
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc       100 Jul 11 20:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 23:28:16] -rwxr-xr-x 1 boinc boinc      7986 Jul 11 20:41 run_atlas
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc       105 Jul 11 20:41 job.xml
[2025-07-11 23:28:16] -rw-r--r-- 2 boinc boinc     15095 Jul 11 20:41 start_atlas.sh
[2025-07-11 23:28:16] drwxrwx--x 2 boinc boinc      4096 Jul 11 20:41 shared
[2025-07-11 23:28:16] -rw-r--r-- 2 boinc boinc    542886 Jul 11 20:41 input.tar.gz
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc      9255 Jul 11 20:41 init_data.xml
[2025-07-11 23:28:16] -rw-r--r-- 2 boinc boinc 319204404 Jul 11 20:41 EVNT.45482060._000549.pool.root.1
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc         0 Jul 11 20:41 boinc_lockfile
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc      2534 Jul 11 20:41 pandaJob.out
[2025-07-11 23:28:16] -rw------- 1 boinc boinc    976223 Jul 11 20:41 agis_schedconf.cvmfs.json
[2025-07-11 23:28:16] -rw------- 1 boinc boinc   1588641 Jul 11 20:41 agis_ddmendpoints.agis.ALL.json
[2025-07-11 23:28:16] drwx------ 4 boinc boinc      4096 Jul 11 20:41 pilot3
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc       529 Jul 11 23:27 boinc_task_state.xml
[2025-07-11 23:28:16] -rw------- 1 boinc boinc 266296548 Jul 11 23:27 HITS.45482062._013719.pool.root.1
[2025-07-11 23:28:16] -rw------- 1 boinc boinc        95 Jul 11 23:27 pilot_heartbeat.json
[2025-07-11 23:28:16] -rw------- 1 boinc boinc      1024 Jul 11 23:27 memory_monitor_summary.json
[2025-07-11 23:28:16] -rw------- 1 boinc boinc    293966 Jul 11 23:27 log.45482062._013719.job.log.tgz.1
[2025-07-11 23:28:16] -rw------- 1 boinc boinc      7730 Jul 11 23:27 heartbeat.json
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc        28 Jul 11 23:28 wrapper_checkpoint.txt
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc      8192 Jul 11 23:28 boinc_mmap_file
[2025-07-11 23:28:16] -rw------- 1 boinc boinc       822 Jul 11 23:28 pilotlog.txt
[2025-07-11 23:28:16] -rw------- 1 boinc boinc    958125 Jul 11 23:28 log.45482062._013719.job.log.1
[2025-07-11 23:28:16] -rw------- 1 boinc boinc       357 Jul 11 23:28 output.list
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc       620 Jul 11 23:28 runtime_log
[2025-07-11 23:28:16] -rw------- 1 boinc boinc   1269760 Jul 11 23:28 result.tar.gz
[2025-07-11 23:28:16] -rw------- 1 boinc boinc       639 Jul 11 23:28 YMDODmNrps7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmInDLDm8HpVRo.diag
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc      8689 Jul 11 23:28 runtime_log.err
[2025-07-11 23:28:16] -rw-r--r-- 1 boinc boinc     21340 Jul 11 23:28 stderr.txt
[2025-07-11 23:28:16] HITS file was successfully produced:
[2025-07-11 23:28:16] -rw------- 1 boinc boinc 266296548 Jul 11 23:27 shared/HITS.pool.root.1
[2025-07-11 23:28:16]  *** Contents of shared directory: ***
[2025-07-11 23:28:16] insgesamt 573576
[2025-07-11 23:28:16] -rw-r--r-- 2 boinc boinc     15095 Jul 11 20:41 start_atlas.sh
[2025-07-11 23:28:16] -rw-r--r-- 2 boinc boinc    542886 Jul 11 20:41 input.tar.gz
[2025-07-11 23:28:16] -rw-r--r-- 2 boinc boinc 319204404 Jul 11 20:41 ATLAS.root_0
[2025-07-11 23:28:16] -rw------- 1 boinc boinc 266296548 Jul 11 23:27 HITS.pool.root.1
[2025-07-11 23:28:16] -rw------- 1 boinc boinc   1269760 Jul 11 23:28 result.tar.gz
23:28:18 (4092840): run_atlas exited; CPU time 38695.849604
23:28:18 (4092840): called boinc_finish(0)

</stderr_txt>
]]>

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