Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:20:12 (4069826): wrapper (7.7.26015): starting
20:20:12 (4069826): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 20:20:12] Arguments: --nthreads 4
[2025-07-11 20:20:12] Threads: 4
[2025-07-11 20:20:12] Checking for CVMFS
[2025-07-11 20:20:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 20:20:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 20:20:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 20:20:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 20:20:13] 2.13.1.0 3130124 1597 49840 148215 3 187 2403542 4194305 2646 130560 0 2400768 99.995 66031 65 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-11 20:20:13] CVMFS is ok
[2025-07-11 20:20:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 20:20:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-11 20:20:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-11 20:20:13] Further information can be found at the LHC@home message board.
[2025-07-11 20:20:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 20:20:13] Checking for apptainer binary...
[2025-07-11 20:20:13] apptainer is not installed, using version from CVMFS
[2025-07-11 20:20:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 20:20:13] Ryze
[2025-07-11 20:20:13] apptainer works
[2025-07-11 20:20:13] Set ATHENA_PROC_NUMBER=4
[2025-07-11 20:20:13] Set ATHENA_CORE_NUMBER=4
[2025-07-11 20:20:13] Starting ATLAS job with PandaID=6721260808
[2025-07-11 20:20:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 22:54:37]  *** The last 200 lines of the pilot log: ***
[2025-07-11 22:54:37] 2025-07-11 20:54:01,267 | INFO     | executing command: lscpu
[2025-07-11 22:54:37] 2025-07-11 20:54:01,294 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-11 22:54:37] 2025-07-11 20:54:03,092 | INFO     | monitor loop #697: job 0:6721260808 is in state 'finished'
[2025-07-11 22:54:37] 2025-07-11 20:54:03,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,208 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-11 22:54:37] 2025-07-11 20:54:04,212 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3134.6210000000005
[2025-07-11 22:54:37] 2025-07-11 20:54:04,215 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6721260808/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,215 | INFO     | extracted standard info from prmon json
[2025-07-11 22:54:37] 2025-07-11 20:54:04,216 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 22:54:37] 2025-07-11 20:54:04,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 22:54:37] 2025-07-11 20:54:04,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 22:54:37] 2025-07-11 20:54:04,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 22:54:37] 2025-07-11 20:54:04,218 | INFO     | fitting pss+swap vs Time
[2025-07-11 22:54:37] 2025-07-11 20:54:04,218 | INFO     | sum of square deviations: 1067554900.0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,219 | INFO     | sum of deviations: 1786938941.0000026
[2025-07-11 22:54:37] 2025-07-11 20:54:04,219 | INFO     | mean x: 1752262612.0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,219 | INFO     | mean y: 2371061.562913907
[2025-07-11 22:54:37] 2025-07-11 20:54:04,219 | INFO     | -- intersect: -2930673689.8041387
[2025-07-11 22:54:37] 2025-07-11 20:54:04,219 | INFO     | intersect: -2930673689.8041387
[2025-07-11 22:54:37] 2025-07-11 20:54:04,219 | INFO     | chi2: 1.194579912897676
[2025-07-11 22:54:37] 2025-07-11 20:54:04,220 | INFO     | sum of square deviations: 964976232.5
[2025-07-11 22:54:37] 2025-07-11 20:54:04,220 | INFO     | sum of deviations: 1914528371.0000005
[2025-07-11 22:54:37] 2025-07-11 20:54:04,220 | INFO     | mean x: 1752262459.5
[2025-07-11 22:54:37] 2025-07-11 20:54:04,220 | INFO     | mean y: 2371251.315068493
[2025-07-11 22:54:37] 2025-07-11 20:54:04,220 | INFO     | -- intersect: -3474145660.878402
[2025-07-11 22:54:37] 2025-07-11 20:54:04,220 | INFO     | intersect: -3474145660.878402
[2025-07-11 22:54:37] 2025-07-11 20:54:04,221 | INFO     | chi2: 1.1952988254451788
[2025-07-11 22:54:37] 2025-07-11 20:54:04,221 | INFO     | current chi2=1.1952988254451788 (change=-0.060181201754768855 %)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,221 | INFO     | right removable region: 145
[2025-07-11 22:54:37] 2025-07-11 20:54:04,221 | INFO     | sum of square deviations: 964976232.5
[2025-07-11 22:54:37] 2025-07-11 20:54:04,221 | INFO     | sum of deviations: -13544013731.999998
[2025-07-11 22:54:37] 2025-07-11 20:54:04,221 | INFO     | mean x: 1752262764.5
[2025-07-11 22:54:37] 2025-07-11 20:54:04,222 | INFO     | mean y: 2393350.0684931506
[2025-07-11 22:54:37] 2025-07-11 20:54:04,222 | INFO     | -- intersect: 24596440483.203743
[2025-07-11 22:54:37] 2025-07-11 20:54:04,222 | INFO     | intersect: 24596440483.203743
[2025-07-11 22:54:37] 2025-07-11 20:54:04,222 | INFO     | chi2: 0.0197560203290477
[2025-07-11 22:54:37] 2025-07-11 20:54:04,222 | INFO     | current chi2=0.0197560203290477 (change=98.3461951673768 %)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,222 | INFO     | sum of square deviations: 869188390.0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | sum of deviations: -12596161023.000002
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | mean x: 1752262917.0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | mean y: 2391833.1985815605
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | -- intersect: 25395949905.417755
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | intersect: 25395949905.417755
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | chi2: 0.01935632379483776
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | current chi2=0.01935632379483776 (change=2.023163205710308 %)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | left removable region: 20
[2025-07-11 22:54:37] 2025-07-11 20:54:04,223 | INFO     | sum of square deviations: 605592750.0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,224 | INFO     | sum of deviations: -8805522691.0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,224 | INFO     | mean x: 1752263039.0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,224 | INFO     | mean y: 2386938.328
[2025-07-11 22:54:37] 2025-07-11 20:54:04,224 | INFO     | -- intersect: 25480882099.4988
[2025-07-11 22:54:37] 2025-07-11 20:54:04,224 | INFO     | intersect: 25480882099.4988
[2025-07-11 22:54:37] 2025-07-11 20:54:04,224 | INFO     | chi2: 0.017232386726969574
[2025-07-11 22:54:37] 2025-07-11 20:54:04,224 | INFO     | -- intersect: 25480882099.4988
[2025-07-11 22:54:37] 2025-07-11 20:54:04,224 | INFO     | current memory leak: -14.54 B/s (using 125 data points, chi2=0.02)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | could have reported an average CPU frequency of 3465 MHz (9 samples)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | ..............................
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | . Timing measurements:
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | . get job = 0 s
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | . initial setup = 1 s
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | . payload setup = 3 s
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | . stage-in = 0 s
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | . payload execution = 9197 s
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | . stage-out = 0 s
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | . log creation = 0 s
[2025-07-11 22:54:37] 2025-07-11 20:54:04,225 | INFO     | ..............................
[2025-07-11 22:54:37] 2025-07-11 20:54:04,294 | INFO     | 
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | job summary report
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | --------------------------------------------------
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | PanDA job id: 6721260808
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | task id: 45482062
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | errors: (none)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | pilot state: finished 
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | transexitcode: 0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | exeerrorcode: 0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | exeerrordiag: 
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | exitcode: 0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | exitmsg: OK
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | cpuconsumptiontime: 36128 s
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | nevents: 400
[2025-07-11 22:54:37] 2025-07-11 20:54:04,295 | INFO     | neventsw: 0
[2025-07-11 22:54:37] 2025-07-11 20:54:04,296 | INFO     | pid: 4080175
[2025-07-11 22:54:37] 2025-07-11 20:54:04,296 | INFO     | pgrp: 4080175
[2025-07-11 22:54:37] 2025-07-11 20:54:04,296 | INFO     | corecount: 4
[2025-07-11 22:54:37] 2025-07-11 20:54:04,296 | INFO     | event service: False
[2025-07-11 22:54:37] 2025-07-11 20:54:04,296 | INFO     | sizes: {0: 2393500, 2: 2393762, 11: 2393790, 9204: 2422266, 9206: 2431278, 9208: 2431334, 9213: 2431720}
[2025-07-11 22:54:37] 2025-07-11 20:54:04,296 | INFO     | --------------------------------------------------
[2025-07-11 22:54:37] 2025-07-11 20:54:04,296 | INFO     | 
[2025-07-11 22:54:37] 2025-07-11 20:54:04,296 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | job 6721260808 has completed (purged errors)
[2025-07-11 22:54:37] 2025-07-11 20:54:04,316 | INFO     | overall cleanup function is called
[2025-07-11 22:54:37] 2025-07-11 20:54:05,324 | INFO     | --- collectZombieJob: --- 10, [4080175]
[2025-07-11 22:54:37] 2025-07-11 20:54:05,324 | INFO     | zombie collector waiting for pid 4080175
[2025-07-11 22:54:37] 2025-07-11 20:54:05,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 22:54:37] 2025-07-11 20:54:05,324 | INFO     | collected zombie processes
[2025-07-11 22:54:37] 2025-07-11 20:54:05,324 | INFO     | will attempt to kill all subprocesses of pid=4080175
[2025-07-11 22:54:37] 2025-07-11 20:54:05,447 | INFO     | process IDs to be killed: [4080175] (in reverse order)
[2025-07-11 22:54:37] 2025-07-11 20:54:05,500 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 22:54:37] 2025-07-11 20:54:05,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 22:54:37] 2025-07-11 20:54:05,504 | INFO     | did not find any defunct processes belonging to 4080175
[2025-07-11 22:54:37] 2025-07-11 20:54:05,507 | INFO     | did not find any defunct processes belonging to 4080175
[2025-07-11 22:54:37] 2025-07-11 20:54:05,508 | INFO     | ready for new job
[2025-07-11 22:54:37] 2025-07-11 20:54:05,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 22:54:37] 2025-07-11 20:54:05,509 | INFO     | ***************************************
[2025-07-11 22:54:37] 2025-07-11 20:54:05,509 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 22:54:37] 2025-07-11 20:54:05,509 | INFO     | ***************************************
[2025-07-11 22:54:37] 2025-07-11 20:54:05,509 | INFO     | 
[2025-07-11 22:54:37] 2025-07-11 20:54:05,510 | INFO     | architecture information:
[2025-07-11 22:54:37] 2025-07-11 20:54:05,511 | INFO     | executing command: cat /etc/os-release
[2025-07-11 22:54:37] 2025-07-11 20:54:05,524 | INFO     | cat /etc/os-release:
[2025-07-11 22:54:37] NAME="CentOS Linux"
[2025-07-11 22:54:37] VERSION="7 (Core)"
[2025-07-11 22:54:37] ID="centos"
[2025-07-11 22:54:37] ID_LIKE="rhel fedora"
[2025-07-11 22:54:37] VERSION_ID="7"
[2025-07-11 22:54:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 22:54:37] ANSI_COLOR="0;31"
[2025-07-11 22:54:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 22:54:37] HOME_URL="https://www.centos.org/"
[2025-07-11 22:54:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 22:54:37] 
[2025-07-11 22:54:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 22:54:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 22:54:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 22:54:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 22:54:37] 
[2025-07-11 22:54:37] 2025-07-11 20:54:05,525 | INFO     | ***************************************
[2025-07-11 22:54:37] 2025-07-11 20:54:06,027 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-07-11 22:54:37] 2025-07-11 20:54:06,044 | INFO     | sufficient remaining disk space (3210367467520 B)
[2025-07-11 22:54:37] 2025-07-11 20:54:06,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 22:54:37] 2025-07-11 20:54:06,044 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 22:54:37] 2025-07-11 20:54:06,045 | INFO     | update_server=False
[2025-07-11 22:54:37] 2025-07-11 20:54:06,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 22:54:37] 2025-07-11 20:54:06,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 22:54:37] 2025-07-11 20:54:06,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 22:54:37] 2025-07-11 20:54:06,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 22:54:37] 2025-07-11 20:54:06,601 | INFO     | aborting loop
[2025-07-11 22:54:37] 2025-07-11 20:54:06,721 | INFO     | all payload control threads have been joined
[2025-07-11 22:54:37] 2025-07-11 20:54:06,723 | INFO     | all data control threads have been joined
[2025-07-11 22:54:37] 2025-07-11 20:54:06,923 | INFO     | all job control threads have been joined
[2025-07-11 22:54:37] 2025-07-11 20:54:07,050 | INFO     | [job] retrieve thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,050 | INFO     | [job] queue monitor thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,103 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,122 | INFO     | [payload] failed_post thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,605 | INFO     | [job] job monitor thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,683 | INFO     | [data] copytool_in thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,725 | INFO     | [payload] control thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,728 | INFO     | [data] control thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,870 | INFO     | [payload] validate_post thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:07,928 | INFO     | [job] control thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:08,050 | INFO     | [data] copytool_out thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:08,191 | INFO     | [job] validate thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:08,353 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:08,500 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:09,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 22:54:37] 2025-07-11 20:54:13,289 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 22:54:37] 2025-07-11 20:54:14,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127939179136832)>', '<ExcThread(monitor, started 127938779391744)>']
[2025-07-11 22:54:37] 2025-07-11 20:54:19,251 | INFO     | all workflow threads have been joined
[2025-07-11 22:54:37] 2025-07-11 20:54:19,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 22:54:37] 2025-07-11 20:54:19,251 | INFO     | traces error code: 0
[2025-07-11 22:54:37] 2025-07-11 20:54:19,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 22:54:37] 2025-07-11 20:54:36,897 | INFO     | PID=4073548 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-11 22:54:37] 2025-07-11 20:54:36,897 | INFO     | .. there are 4 such processes running
[2025-07-11 22:54:37] 2025-07-11 20:54:36,897 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 22:54:37] 2025-07-11 20:54:36,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 22:54:37] 2025-07-11 20:54:36,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 22:54:37] 2025-07-11 20:54:36,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 22:54:37] 2025-07-11 20:54:36,898 | INFO     | [monitor] control thread has ended
[2025-07-11 22:54:37] 2025-07-11 20:54:36,988 [wrapper] ==== pilot stdout END ====
[2025-07-11 22:54:37] 2025-07-11 20:54:36,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 22:54:37] 2025-07-11 20:54:36,993 [wrapper] pilotpid: 4073548
[2025-07-11 22:54:37] 2025-07-11 20:54:36,995 [wrapper] Pilot exit status: 0
[2025-07-11 22:54:37] 2025-07-11 20:54:37,003 [wrapper] pandaids: 6721260808
[2025-07-11 22:54:37] 2025-07-11 20:54:37,035 [wrapper] cleanup supervisor_pilot 4156051 4073549
[2025-07-11 22:54:37] 2025-07-11 20:54:37,037 [wrapper] Test setup, not cleaning
[2025-07-11 22:54:37] 2025-07-11 20:54:37,039 [wrapper] apfmon messages muted
[2025-07-11 22:54:37] 2025-07-11 20:54:37,042 [wrapper] ==== wrapper stdout END ====
[2025-07-11 22:54:37] 2025-07-11 20:54:37,044 [wrapper] ==== wrapper stderr END ====
[2025-07-11 22:54:37]  *** Error codes and diagnostics ***
[2025-07-11 22:54:37]     "exeErrorCode": 0,
[2025-07-11 22:54:37]     "exeErrorDiag": "",
[2025-07-11 22:54:37]     "pilotErrorCode": 0,
[2025-07-11 22:54:37]     "pilotErrorDiag": "",
[2025-07-11 22:54:37]  *** Listing of results directory ***
[2025-07-11 22:54:37] insgesamt 576632
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc    530466 Jul  7 06:40 pilot3.tar.gz
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc      5112 Jul  7 06:54 queuedata.json
[2025-07-11 22:54:37] -rwx------ 1 boinc boinc     36292 Jul  7 06:55 runpilot2-wrapper.sh
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc       100 Jul 11 20:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 22:54:37] -rwxr-xr-x 1 boinc boinc      7986 Jul 11 20:20 run_atlas
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc       105 Jul 11 20:20 job.xml
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc      9255 Jul 11 20:20 init_data.xml
[2025-07-11 22:54:37] -rw-r--r-- 2 boinc boinc 319765083 Jul 11 20:20 EVNT.45482060._000657.pool.root.1
[2025-07-11 22:54:37] -rw-r--r-- 2 boinc boinc     15095 Jul 11 20:20 start_atlas.sh
[2025-07-11 22:54:37] drwxrwx--x 2 boinc boinc      4096 Jul 11 20:20 shared
[2025-07-11 22:54:37] -rw-r--r-- 2 boinc boinc    542883 Jul 11 20:20 input.tar.gz
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc         0 Jul 11 20:20 boinc_lockfile
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc      2534 Jul 11 20:20 pandaJob.out
[2025-07-11 22:54:37] -rw------- 1 boinc boinc    976223 Jul 11 20:20 agis_schedconf.cvmfs.json
[2025-07-11 22:54:37] -rw------- 1 boinc boinc   1588641 Jul 11 20:20 agis_ddmendpoints.agis.ALL.json
[2025-07-11 22:54:37] drwx------ 4 boinc boinc      4096 Jul 11 20:20 pilot3
[2025-07-11 22:54:37] -rw------- 1 boinc boinc 264458099 Jul 11 22:53 HITS.45482062._016539.pool.root.1
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc       529 Jul 11 22:53 boinc_task_state.xml
[2025-07-11 22:54:37] -rw------- 1 boinc boinc        95 Jul 11 22:53 pilot_heartbeat.json
[2025-07-11 22:54:37] -rw------- 1 boinc boinc      1025 Jul 11 22:53 memory_monitor_summary.json
[2025-07-11 22:54:37] -rw------- 1 boinc boinc    293235 Jul 11 22:53 log.45482062._016539.job.log.tgz.1
[2025-07-11 22:54:37] -rw------- 1 boinc boinc      7728 Jul 11 22:54 heartbeat.json
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc      8192 Jul 11 22:54 boinc_mmap_file
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc        27 Jul 11 22:54 wrapper_checkpoint.txt
[2025-07-11 22:54:37] -rw------- 1 boinc boinc       822 Jul 11 22:54 pilotlog.txt
[2025-07-11 22:54:37] -rw------- 1 boinc boinc    894213 Jul 11 22:54 log.45482062._016539.job.log.1
[2025-07-11 22:54:37] -rw------- 1 boinc boinc       357 Jul 11 22:54 output.list
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc       620 Jul 11 22:54 runtime_log
[2025-07-11 22:54:37] -rw------- 1 boinc boinc   1208320 Jul 11 22:54 result.tar.gz
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc      8688 Jul 11 22:54 runtime_log.err
[2025-07-11 22:54:37] -rw------- 1 boinc boinc       636 Jul 11 22:54 aV1NDmj3ss7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmILELDm9NbMLo.diag
[2025-07-11 22:54:37] -rw-r--r-- 1 boinc boinc     21306 Jul 11 22:54 stderr.txt
[2025-07-11 22:54:37] HITS file was successfully produced:
[2025-07-11 22:54:37] -rw------- 1 boinc boinc 264458099 Jul 11 22:53 shared/HITS.pool.root.1
[2025-07-11 22:54:37]  *** Contents of shared directory: ***
[2025-07-11 22:54:37] insgesamt 572268
[2025-07-11 22:54:37] -rw-r--r-- 2 boinc boinc 319765083 Jul 11 20:20 ATLAS.root_0
[2025-07-11 22:54:37] -rw-r--r-- 2 boinc boinc     15095 Jul 11 20:20 start_atlas.sh
[2025-07-11 22:54:37] -rw-r--r-- 2 boinc boinc    542883 Jul 11 20:20 input.tar.gz
[2025-07-11 22:54:37] -rw------- 1 boinc boinc 264458099 Jul 11 22:53 HITS.pool.root.1
[2025-07-11 22:54:37] -rw------- 1 boinc boinc   1208320 Jul 11 22:54 result.tar.gz
22:54:38 (4069826): run_atlas exited; CPU time 36218.055066
22:54:38 (4069826): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN